View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19236_low_39 (Length: 254)
Name: NF19236_low_39
Description: NF19236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19236_low_39 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 95 - 254
Target Start/End: Complemental strand, 1785356 - 1785197
Alignment:
| Q |
95 |
aagcacaccatttgcctatttgactctactaggagaataatttttcacaataaaaaatataggcgatgact-agggttcaaatgttatagtgacacctct |
193 |
Q |
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| T |
1785356 |
aagcacaccatttgcctatttgactctactaggagaa-aatttttcacaataaaaaatataggcgatgacttagggttcaagtgttatagtgacacctct |
1785258 |
T |
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| Q |
194 |
ttgatttattaaaagaaattgaaattgaatgaccaacaatatatttatatgagatccttac |
254 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
1785257 |
ttgatttattaaaagaaattgaaattgaatgaccaataatatatttatatgagatccttac |
1785197 |
T |
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