View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19237_low_2 (Length: 528)

Name: NF19237_low_2
Description: NF19237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19237_low_2
NF19237_low_2
[»] chr6 (68 HSPs)
chr6 (18-528)||(31284294-31284804)
chr6 (19-528)||(26622982-26623514)
chr6 (19-528)||(26728960-26729492)
chr6 (281-521)||(27592954-27593194)
chr6 (205-528)||(26861622-26861942)
chr6 (259-528)||(27610914-27611183)
chr6 (259-528)||(27718291-27718560)
chr6 (281-528)||(27678952-27679199)
chr6 (281-528)||(27677548-27677795)
chr6 (281-528)||(27724779-27725026)
chr6 (205-528)||(28781145-28781468)
chr6 (349-528)||(26823846-26824025)
chr6 (281-524)||(27706336-27706579)
chr6 (205-528)||(28786284-28786607)
chr6 (205-528)||(28792405-28792728)
chr6 (344-528)||(26646485-26646669)
chr6 (344-528)||(26752453-26752637)
chr6 (259-519)||(26884178-26884440)
chr6 (317-528)||(27698464-27698675)
chr6 (254-528)||(26802448-26802722)
chr6 (320-528)||(27604678-27604886)
chr6 (317-528)||(25481748-25481959)
chr6 (166-528)||(26655995-26656357)
chr6 (166-528)||(26761966-26762328)
chr6 (402-528)||(25579725-25579851)
chr6 (402-528)||(26142871-26142997)
chr6 (205-528)||(27337923-27338246)
chr6 (205-528)||(27398663-27398986)
chr6 (304-528)||(27531154-27531378)
chr6 (402-528)||(25538546-25538672)
chr6 (402-528)||(26055932-26056058)
chr6 (402-528)||(26075902-26076028)
chr6 (402-528)||(26048851-26048977)
chr6 (402-528)||(26070020-26070146)
chr6 (317-492)||(27427576-27427751)
chr6 (205-527)||(28234571-28234892)
chr6 (206-495)||(28181153-28181442)
chr6 (206-527)||(28226957-28227278)
chr6 (205-518)||(28242820-28243133)
chr6 (406-512)||(28139563-28139669)
chr6 (205-453)||(26848741-26848989)
chr6 (281-517)||(28098303-28098539)
chr6 (205-495)||(28185405-28185695)
chr6 (281-450)||(26949745-26949914)
chr6 (419-528)||(27229238-27229347)
chr6 (211-453)||(27214498-27214743)
chr6 (211-453)||(27234485-27234730)
chr6 (404-518)||(26341991-26342105)
chr6 (402-527)||(28149945-28150069)
chr6 (205-493)||(28297571-28297859)
chr6 (205-493)||(28514214-28514502)
chr6 (416-528)||(25506978-25507090)
chr6 (332-453)||(26811590-26811711)
chr6 (332-495)||(28325520-28325683)
chr6 (405-495)||(2184327-2184417)
chr6 (112-188)||(26623636-26623712)
chr6 (112-188)||(26729613-26729689)
chr6 (404-452)||(26975134-26975182)
chr6 (402-452)||(25071741-25071791)
chr6 (409-519)||(26937109-26937219)
chr6 (405-452)||(2184980-2185027)
chr6 (332-387)||(29826174-29826229)
chr6 (215-249)||(25580004-25580038)
chr6 (404-450)||(26635774-26635820)
chr6 (404-450)||(26741740-26741786)
chr6 (404-450)||(26959250-26959296)
chr6 (205-263)||(28098215-28098273)
chr6 (205-249)||(26937391-26937435)
[»] chr1 (3 HSPs)
chr1 (317-528)||(268314-268525)
chr1 (162-495)||(28127481-28127814)
chr1 (205-528)||(28164208-28164530)
[»] scaffold0349 (2 HSPs)
scaffold0349 (281-528)||(14290-14536)
scaffold0349 (281-528)||(3355-3603)
[»] scaffold0277 (2 HSPs)
scaffold0277 (205-528)||(4529-4852)
scaffold0277 (205-528)||(13490-13813)
[»] chr4 (8 HSPs)
chr4 (317-528)||(18679524-18679735)
chr4 (317-525)||(18699357-18699565)
chr4 (349-528)||(18731493-18731672)
chr4 (344-525)||(18655461-18655642)
chr4 (349-528)||(18724074-18724253)
chr4 (317-492)||(18073804-18073979)
chr4 (308-452)||(5090915-5091059)
chr4 (402-492)||(17989095-17989185)
[»] chr8 (1 HSPs)
chr8 (317-528)||(29273740-29273951)
[»] scaffold0419 (1 HSPs)
scaffold0419 (205-528)||(7531-7854)
[»] scaffold0038 (4 HSPs)
scaffold0038 (205-527)||(34732-35054)
scaffold0038 (206-527)||(27455-27776)
scaffold0038 (205-518)||(42982-43295)
scaffold0038 (332-495)||(116835-116998)
[»] scaffold0003 (1 HSPs)
scaffold0003 (317-492)||(59612-59787)
[»] scaffold0019 (1 HSPs)
scaffold0019 (332-519)||(58267-58454)
[»] chr2 (4 HSPs)
chr2 (404-527)||(3279695-3279818)
chr2 (205-351)||(17993542-17993688)
chr2 (404-452)||(17993741-17993789)
chr2 (205-249)||(3279988-3280032)
[»] chr5 (1 HSPs)
chr5 (311-518)||(16689027-16689234)
[»] scaffold1254 (1 HSPs)
scaffold1254 (440-528)||(10-98)


Alignment Details
Target: chr6 (Bit Score: 443; Significance: 0; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 18 - 528
Target Start/End: Complemental strand, 31284804 - 31284294
Alignment:
Q  18 caatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaataactagtatttgtttaaatatataaataaaaaatgtttccc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31284804 caatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaataactaatatttgtttaaatatataaataaaaaatgtttccc 31284705  T
Q  118 ttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagac 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31284704 ttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagaaggctacccaggagaacgatggtcgccagac 31284605  T
Q  218 aagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctc 317  Q
    |||||||||||||| ||||||||||||||||| |||| || ||| ||||||| |||  | || | ||||||||||||||||||  |||| | ||||||||    
T  31284604 aagttagctgcttgagtaagagctatcttccatttttgcaacctttccatatgatctgtattatgttggaacctctcttcatgcttagccaatgcttctc 31284505  T
Q  318 cataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggac 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31284504 cataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggac 31284405  T
Q  418 aagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatt 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31284404 aagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatt 31284305  T
Q  518 tcatcccctct 528  Q
    |||||||||||    
T  31284304 tcatcccctct 31284294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 528
Target Start/End: Complemental strand, 26623514 - 26622982
Alignment:
Q  19 aatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaa-taactagtatttgtttaaatatataaataaaaaat---gttt 114  Q
    |||||||| |||||||| || | ||| |||||||||||||| |||||||| |||||| || ||| |||||||||||||||||||| |||||||   ||||    
T  26623514 aatcacatttatatcttaacaattatgtcatacaattctaaatgttttgatatacaaatacctaatatttgtttaaatatataaacaaaaaattgtgttt 26623415  T
Q  115 cccttttaagcatttatatggaatgattgaggaataaaaattgaagaa----------------ggcaaaacaagattgaagtgaagtaggctacccagg 198  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||                ||||||||||||||||||||||||||||||||||||    
T  26623414 cccttttaagcattaatatggaatgattggggaataagaattgaagaaataaagcatatatgaaggcaaaacaagattgaagtgaagtaggctacccagg 26623315  T
Q  199 agaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcc---tttttgttttggaacctctct 295  Q
    |  ||||||||| |||||||||||||||||||| | ||||||||||||||| |||| || ||||||||||||||     || || || |||||||||| |    
T  26623314 atgacgatggtctccagacaagttagctgcttgtgcaagagctatcttccatttttgcaacctctccatattatatgtattattattatggaacctcttt 26623215  T
Q  296 tcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgct 395  Q
     ||||  |||| |||||||| |||||||| ||  | ||||| || |  |||| ||||||||||||| |||| |||||||||||||| ||||| |||   |    
T  26623214 gcatgcttagcaagtgcttcgccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttt 26623115  T
Q  396 tatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    | ||  |||||||||||||||||||||| ||||||||||| || ||| | |||||||||| ||||||||| || |||||||||||||||||||| || ||    
T  26623114 tgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagc 26623015  T
Q  496 attgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||||| ||||||||| ||||||| ||||||||    
T  26623014 attgtcaagtgatggtttgatttcgtcccctct 26622982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 528
Target Start/End: Complemental strand, 26729492 - 26728960
Alignment:
Q  19 aatcacatctatatcttgacgaatatatcatacaattctaattgttttgacatacaa-taactagtatttgtttaaatatataaataaaaaat---gttt 114  Q
    |||||||| |||||||| || | ||| |||||||||||||| |||||||| |||||| || ||| |||||||||||||||||||| |||||||   ||||    
T  26729492 aatcacatttatatcttaacaattatgtcatacaattctaaatgttttgatatacaaatacctaatatttgtttaaatatataaacaaaaaattgtgttt 26729393  T
Q  115 cccttttaagcatttatatggaatgattgaggaataaaaattgaagaa----------------ggcaaaacaagattgaagtgaagtaggctacccagg 198  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||                ||||||||||||||||||||||||||||||||||||    
T  26729392 cccttttaagcattaatatggaatgattggggaataagaattgaagaaataaagcatatatgaaggcaaaacaagattgaagtgaagtaggctacccagg 26729293  T
Q  199 agaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcc---tttttgttttggaacctctct 295  Q
    |  ||||||||| |||||||||||||||||||| | ||||||||||||||| |||| || ||||||||||||||     || || || |||||||||| |    
T  26729292 atgacgatggtctccagacaagttagctgcttgtgcaagagctatcttccatttttgcaacctctccatattatatgtattattattatggaacctcttt 26729193  T
Q  296 tcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgct 395  Q
     ||||  |||| |||||||| |||||||| ||  | ||||| || |  |||| ||||||||||||| |||| |||||||||||||| ||||| |||   |    
T  26729192 gcatgcttagcaagtgcttcgccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttt 26729093  T
Q  396 tatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    | ||  |||||||||||||||||||||| ||||||||||| || ||| | |||||||||| ||||||||| || |||||||||||||||||||| || ||    
T  26729092 tgtagcagtgaatgatgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagc 26728993  T
Q  496 attgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||||| ||||||||| ||||||| ||||||||    
T  26728992 attgtcaagtgatggtttgatttcgtcccctct 26728960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 281 - 521
Target Start/End: Original strand, 27592954 - 27593194
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||      
T  27592954 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttatgatgtcgcacatgagaaggatccacaccaaagaaaacaggcaaaacag 27593053  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  | |||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||| || |||||||||||    
T  27593054 ggcgaccctttgtcttgtagcaatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27593153  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcat 521  Q
    ||||||||||||||| |||   |||||||||||||||||||    
T  27593154 agactcttcaatggccttgagaagtgatggtgtgatttcat 27593194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 205 - 528
Target Start/End: Complemental strand, 26861942 - 26861622
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||| | ||||| |  |||||  | | || ||||||||| |||||| | |  ||||| ||||| | ||||||  ||    
T  26861942 atggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttttcatgctta 26861843  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| |||||| ||||||||||||||||||||| || |||||||| |||| ||||||| |||||||||| |||||| |||| |||  |   ||    
T  26861842 gccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgca---gt 26861746  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
     |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||    
T  26861745 taatgatttggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgag 26861646  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    ||||  | ||||||||||||||||    
T  26861645 tgatcttttgatttcatcccctct 26861622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 259 - 528
Target Start/End: Original strand, 27610914 - 27611183
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||| ||| |  ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||    
T  27610914 cctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcactttagtaggttccacg 27611013  T
Q  359 ccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcag 458  Q
    || |||||||| ||||||||||||||||| |||  ||| ||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  27611014 ccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatag 27611113  T
Q  459 aaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||| || |||||||||||||| || |||||||| |||  ||||||||||||||||||||| |||||    
T  27611114 aaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 27611183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 259 - 528
Target Start/End: Original strand, 27718291 - 27718560
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||| ||| |  ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| ||||||    
T  27718291 cctctccatgttattcttatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacg 27718390  T
Q  359 ccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcag 458  Q
    || |||||||| ||||||||||||||||| |||  ||| ||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||  ||    
T  27718391 ccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatag 27718490  T
Q  459 aaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||| || |||||||||||||| || |||||||| |||  ||||||||||||||||||||| |||||    
T  27718491 aaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 27718560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 281 - 528
Target Start/End: Complemental strand, 27679199 - 27678952
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| ||||| ||||||||||| |||| |||||    
T  27679199 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaacagtaggttccacaccaaagaaaacaggcagaacga 27679100  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  |||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||| || |||||||||||    
T  27679099 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27679000  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||||||||||| |||   |||||||||||||||||||| |||||    
T  27678999 agactcttcaatggccttgagaagtgatggtgtgatttcatctcctct 27678952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 281 - 528
Target Start/End: Original strand, 27677548 - 27677795
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||||  || ||| |||||  |||||||||| |||| |||||    
T  27677548 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacaatagtaggttccacagcaaagaaaacaggcagaacga 27677647  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  |||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||| |  |||||||||||    
T  27677648 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcct 27677747  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||||||||||| |||   ||||||||||||||||||||||||||    
T  27677748 agactcttcaatggccttgagaagtgatggtgtgatttcatcccctct 27677795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 281 - 528
Target Start/End: Original strand, 27724779 - 27725026
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| |||||||| |||||||| ||||||||||    
T  27724779 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacga 27724878  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||| || |||||||||||    
T  27724879 ggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcct 27724978  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||| || |||||||| |||  ||||||||||||||||||||| |||||    
T  27724979 agattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 27725026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 205 - 528
Target Start/End: Complemental strand, 28781468 - 28781145
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| |||||||  |    
T  28781468 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgtcca 28781369  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| ||||||  |||| ||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||| |||  ||| ||  | |    
T  28781368 gccaatgcttcaccataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28781269  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||| |||||||||||||| |||||    |||| ||||||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  |||    
T  28781268 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28781169  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    |||||||||||||||||| |||||    
T  28781168 tgatggtgtgatttcatctcctct 28781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 349 - 528
Target Start/End: Complemental strand, 26824025 - 26823846
Alignment:
Q  349 aggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggca 448  Q
    ||||||||| ||| ||||||| |||||||||||||| || |||| ||| || | | ||||||||||||||||||||||||||||||| || |||||||||    
T  26824025 aggatccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggca 26823926  T
Q  449 tagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||| ||  ||||| |||||||||    
T  26823925 tagttggcagaaaacacaggaataaaaatcctagactcttcaatggcattattgagtgattgttcgattttatcccctct 26823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 281 - 524
Target Start/End: Original strand, 27706336 - 27706579
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| || || ||||| ||||| |||| |||||    
T  27706336 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttctacaccaaataaaacaggcagaacga 27706435  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  |||||||||||||||||||||||||||||||||| || |||||||||||| ||  ||||||||| || |||||||||||    
T  27706436 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcct 27706535  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcatccc 524  Q
    ||||||||||||||| |||   ||||||||||||||||||||||    
T  27706536 agactcttcaatggccttgagaagtgatggtgtgatttcatccc 27706579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 205 - 528
Target Start/End: Complemental strand, 28786607 - 28786284
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| ||||||   |    
T  28786607 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgccca 28786508  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || |||||| || ||||||||||| ||||||||||||||||| |||  ||| ||  | |    
T  28786507 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28786408  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||| |||||||||||||| |||||    || | ||| ||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  |||    
T  28786407 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28786308  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    |||||||||||||||||| |||||    
T  28786307 tgatggtgtgatttcatctcctct 28786284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 205 - 528
Target Start/End: Complemental strand, 28792728 - 28792405
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||||||| |  ||||| ||||||| ||||||   |    
T  28792728 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgccca 28792629  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || |||||| || ||||||||||| ||||||||||||||||| |||  ||| ||  | |    
T  28792628 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28792529  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||| |||||||||||||| |||||    || | ||| ||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  |||    
T  28792528 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 28792429  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    |||||||||||||||||| |||||    
T  28792428 tgatggtgtgatttcatctcctct 28792405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 344 - 528
Target Start/End: Complemental strand, 26646669 - 26646485
Alignment:
Q  344 tgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaag 443  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||| |||  ||| ||  | ||||||||||||||||||||||||||||||||    ||||    
T  26646669 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26646570  T
Q  444 aggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||||||||||  ||||||||| || |||||||||||||| ||||||||||| |||  ||||||||||||||||||||| |||||    
T  26646569 aggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctct 26646485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 344 - 528
Target Start/End: Complemental strand, 26752637 - 26752453
Alignment:
Q  344 tgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaag 443  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||| |||  ||| ||  | ||||||||||||||||||||||||||||||||    ||||    
T  26752637 tgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaatgatgtggacaagttcgtccaaacaaaatttagaag 26752538  T
Q  444 aggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||||||||||  ||||||||| || |||||||||||||| ||||||||||| |||  ||||||||||||||||||||| |||||    
T  26752537 aggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctct 26752453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 259 - 519
Target Start/End: Complemental strand, 26884440 - 26884178
Alignment:
Q  259 cctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacg 358  Q
    ||||||||| |||||||| |  ||||| ||||| | ||||||   ||| | |||||| |||||||||||| ||||||||||||||| || |||||||||     
T  26884440 cctctccatgttatccttatcattttgaaaccttttttcatggtcagccaatgcttcaccataactacctgtatgatgtcgcacatcagtaggatccaca 26884341  T
Q  359 ccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatga--tgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggc 456  Q
    ||||  ||||| ||||||||||||||||| |||  ||  ||  |||||||||  ||||||||||||||||||||||||| || ||||| ||||||||||     
T  26884340 ccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatgacatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggt 26884241  T
Q  457 agaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttc 519  Q
    |||||| |  || |||||||| ||||| ||||||||||| |||  ||||||||||||||||||    
T  26884240 agaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttc 26884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 317 - 528
Target Start/End: Original strand, 27698464 - 27698675
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    |||||||||||| ||||||||| ||||| ||  || ||||| || |||||||| ||||||||||||||||| |||  ||  ||  ||||||| |||||||    
T  27698464 ccataactacctttatgatgtctcacattagttggttccacaccgaagaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaattatgtgga 27698563  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || ||||| |||||||||  ||||||||| || |||||||||||||| || |||||||| |||  |||||||||||||||    
T  27698564 caagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatggtgtgat 27698663  T
Q  517 ttcatcccctct 528  Q
    |||||| |||||    
T  27698664 ttcatctcctct 27698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 528
Target Start/End: Complemental strand, 26802722 - 26802448
Alignment:
Q  254 tccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggat 353  Q
    |||| ||||||||| |||||||| |  ||||| ||||| | ||||||   ||| | |||||| ||||| |||| | ||||||| ||||||| || |||||    
T  26802722 tccaacctctccatgttatccttatcattttgaaaccttttttcatgctcagccaatgcttcaccatagctacatgtatgatggcgcacattagtaggat 26802623  T
Q  354 ccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagtt 453  Q
    |||| ||||||||||  ||||| ||||||||||| |||  ||||||  | ||||| ||||| |||||||||||||| |||||    ||||||||||||||    
T  26802622 ccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagaggcatagtt 26802523  T
Q  454 ggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    |  ||||||||| || |||||||| ||||| ||||||||||| |||  ||||||||||||||||||||| |||||    
T  26802522 gatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcatctcctct 26802448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 320 - 528
Target Start/End: Original strand, 27604678 - 27604886
Alignment:
Q  320 taactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaa 419  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||  | | ||  | ||||||||||| ||||    
T  27604678 taactacctttatgatgtcgcacatgagaaggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaa 27604777  T
Q  420 gttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttc 519  Q
    |||| ||||||||||| || ||||||||||| |||  ||||||||| || ||||||||||| || || |||||||| |||   |||| ||||||||||||    
T  27604778 gttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctggtgtgatttc 27604877  T
Q  520 atcccctct 528  Q
    ||| |||||    
T  27604878 atctcctct 27604886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 317 - 528
Target Start/End: Complemental strand, 25481959 - 25481748
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    |||||||||| | ||||| |||| |||| || ||||||||| ||| |||||||||| || || | || ||  |||  ||| ||  |||||||||||||||    
T  25481959 ccataactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtgaatgatgtgga 25481860  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||| | ||| ||| |||||||||| ||||||||||| ||| | ||||||||||||||    
T  25481859 caagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatggtgtgat 25481760  T
Q  517 ttcatcccctct 528  Q
    |||||| |||||    
T  25481759 ttcatctcctct 25481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 166 - 528
Target Start/End: Complemental strand, 26656357 - 26655995
Alignment:
Q  166 aaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctcc 265  Q
    ||||||||||| |||| |||| || |||||  ||  || ||||| |||||||||||| || |||| ||| ||||| |||||||| |  |||| ||||| |    
T  26656357 aaaacaagatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgc 26656258  T
Q  266 atattatcctttttgttttggaacctctcttcatgtgtagctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaag 364  Q
    || || ||||| || ||||||||| ||| ||||||  |||  || |||| | || ||||| ||  | |||||||| |  |||| ||||||||| ||| ||    
T  26656257 atgttttccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatag 26656159  T
Q  365 aaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaaca 464  Q
    ||||| ||||||||    | ||| |||  ||||||  | |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |    
T  26656158 aaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaata 26656059  T
Q  465 cggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
     ||| ||||||||||| || ||||||||||| ||  |||||||||||||||||||||| |||||    
T  26656058 tgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26655995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 166 - 528
Target Start/End: Complemental strand, 26762328 - 26761966
Alignment:
Q  166 aaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctcc 265  Q
    ||||||||||| |||| |||| || |||||  ||  || ||||| |||||||||||| || |||| ||| ||||| |||||||| |  |||| ||||| |    
T  26762328 aaaacaagatttaagtaaagtggggtacccttgactacaatggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgc 26762229  T
Q  266 atattatcctttttgttttggaacctctcttcatgtgtagctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaag 364  Q
    || || ||||| || ||||||||| ||| ||||||  |||  || |||| | || ||||| ||  | |||||||| |  |||| ||||||||| ||| ||    
T  26762228 atgttttccttgttattttggaacttcttttcatgcttagtaagatgct-caccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatag 26762130  T
Q  365 aaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaaca 464  Q
    ||||| ||||||||    | ||| |||  ||||||  | |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |    
T  26762129 aaaacaggcaaaaccgaacaaccctttgtcttatagcaatgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaata 26762030  T
Q  465 cggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
     ||| ||||||||||| || ||||||||||| ||  |||||||||||||||||||||| |||||    
T  26762029 tgggaataaaaatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctct 26761966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 25579851 - 25579725
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||||||| ||||||||||| ||| |    
T  25579851 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgac 25579752  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     |||||||||||||||||||| |||||    
T  25579751 aagtgatggtgtgatttcatctcctct 25579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 26142997 - 26142871
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||||||| ||||||||||| ||| |    
T  26142997 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgac 26142898  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     |||||||||||||||||||| |||||    
T  26142897 aagtgatggtgtgatttcatctcctct 26142871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 27337923 - 27338246
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| || |||||||| |||||||||||||| |||||||| || | || ||||||||| || ||||| || ||||||||| | ||||||||  ||    
T  27337923 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgctta 27338022  T
Q  305 gctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaag 403  Q
    |  || |||| | |||||||| ||  | |||||||| || |||| ||||||| | ||| ||||||| ||||||||    | |||  ||  ||| ||  ||    
T  27338023 gtaagatgct-caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcag 27338121  T
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga 503  Q
    |||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||| | ||| || ||||||||||||||||||||||| ||| | |    
T  27338122 tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaa 27338221  T
Q  504 gtgatggtgtgatttcatcccctct 528  Q
    ||||||||||| ||||||| |||||    
T  27338222 gtgatggtgtgctttcatctcctct 27338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 27398663 - 27398986
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| || |||||||| |||||||||||||| |||||||| || | || ||||||||| || ||||| || ||||||||| | ||||||||  ||    
T  27398663 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgctta 27398762  T
Q  305 gctag-tgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaag 403  Q
    |  || |||| | |||||||| ||  | |||||||| || |||| ||||||| | ||| ||||||| ||||||||    | |||  ||  ||| ||  ||    
T  27398763 gtaagatgct-caccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcag 27398861  T
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga 503  Q
    |||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||||| | ||| || ||||||||||||||||||||||| ||| | |    
T  27398862 tgaatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaa 27398961  T
Q  504 gtgatggtgtgatttcatcccctct 528  Q
    ||||||||||| ||||||| |||||    
T  27398962 gtgatggtgtgctttcatctcctct 27398986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 528
Target Start/End: Original strand, 27531154 - 27531378
Alignment:
Q  304 agctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaag 403  Q
    ||||| |||||| ||||| |||||| | ||||||||||||| || ||||||||| ||||  ||||| |||||||| || | ||| |||   |  ||  |     
T  27531154 agctaatgcttcaccatatctacctgtgtgatgtcgcacatcagtaggatccacaccaataaaaacaggcaaaacaagacaaccctttgtatcgtagcaa 27531253  T
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga 503  Q
    ||| ||||||| |||||||||||||||||||| || ||||| ||||||||  ||||||| ||||| |||||||||||||| | |||||||||||| |  |    
T  27531254 tgagtgatgtgaacaagttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcatttttta 27531353  T
Q  504 gtgatggtgtgatttcatcccctct 528  Q
    ||||||||||||||||||| |||||    
T  27531354 gtgatggtgtgatttcatctcctct 27531378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 25538672 - 25538546
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| ||||| ||||| ||||| ||| |    
T  25538672 agtgaatgatctggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgac 25538573  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     |||||||||||||||||||| |||||    
T  25538572 aagtgatggtgtgatttcatctcctct 25538546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 26056058 - 26055932
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||| ||| ||||| ||||| ||| |    
T  26056058 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgac 26055959  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     ||||||| |||||||||||| |||||    
T  26055958 aagtgatgatgtgatttcatctcctct 26055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 26076028 - 26075902
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||| ||| ||||| ||||| ||| |    
T  26076028 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgac 26075929  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     ||||||| |||||||||||| |||||    
T  26075928 aagtgatgatgtgatttcatctcctct 26075902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 26048977 - 26048851
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||||||| ||||| ||||| ||| |    
T  26048977 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgac 26048878  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     |||   |||||||||||||| |||||    
T  26048877 aagtttgggtgtgatttcatctcctct 26048851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 528
Target Start/End: Complemental strand, 26070146 - 26070020
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||||||||| ||||| ||||| ||| |    
T  26070146 agtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgac 26070047  T
Q  502 gagtgatggtgtgatttcatcccctct 528  Q
     |||   |||||||||||||| |||||    
T  26070046 aagtttgggtgtgatttcatctcctct 26070020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 492
Target Start/End: Original strand, 27427576 - 27427751
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||| ||| ||    || ||  |||||||||||||||    
T  27427576 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 27427675  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaat 492  Q
    |||||  |||||||||| | || ||||| ||||||||||||||||| | ||| || |||||||| || ||||||||    
T  27427676 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 27427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 205 - 527
Target Start/End: Complemental strand, 28234892 - 28234571
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| ||||||| || ||| |||||||| |||||||| || | || ||||||||| |||||||| || ||||||||| ||| |  |||   |    
T  28234892 atggtggccagaaaagttagatgtttgagtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatca 28234793  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  || ||||||  |||||||| ||||| | ||||| ||   |  | |    
T  28234792 tccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactaggcgtctattttcctcgaagca-t 28234694  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
     |||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||||||||||||||| |||   ||    
T  28234693 aaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaag 28234594  T
Q  505 tgatggtgtgatttcatcccctc 527  Q
    ||||||||| |||||||| ||||    
T  28234593 tgatggtgttatttcatctcctc 28234571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 495
Target Start/End: Complemental strand, 28181442 - 28181153
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  28181442 tggtggccagagaagttagcagtttgagtaagagcaatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 28181343  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtg 405  Q
    | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  || ||||||  |||||||| || || ||  ||| |||  |  ||||    
T  28181342 ccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagtg 28181243  T
Q  406 aatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || ||||| || |||||||||||||||||||||||    
T  28181242 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggc 28181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 527
Target Start/End: Complemental strand, 28227278 - 28226957
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  28227278 tggtggccagagaagttagcagtttgagtaagagccatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 28227179  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtg 405  Q
    | |||||||  |||||||| ||  | |||||||||||||||||||| |||||  || ||||||  |||||||| ||||| | ||||| |||  |  | ||    
T  28227178 ccagtgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatg 28227079  T
Q  406 aatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagt 505  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||| ||||||||| | |||   |||    
T  28227078 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagt 28226979  T
Q  506 gatggtgtgatttcatcccctc 527  Q
    |||| ||| |||||||| ||||    
T  28226978 gatgatgttatttcatcacctc 28226957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 518
Target Start/End: Complemental strand, 28243133 - 28242820
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||||| ||| || |||||  ||||||| || | || ||||||||| |||||| |  | ||||||||| ||||   |||   |    
T  28243133 atggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgctattttggaacttctcaatatgctca 28243034  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || |||||||  |||||||| ||  | ||||||| ||| | |||||| |||||  || ||||||  |||||||| ||||| ||||||| |||  |  |||    
T  28243033 gccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagt 28242934  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||||||||||||||| |||   ||    
T  28242933 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaag 28242834  T
Q  505 tgatggtgtgattt 518  Q
    ||||||||| ||||    
T  28242833 tgatggtgttattt 28242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 406 - 512
Target Start/End: Complemental strand, 28139669 - 28139563
Alignment:
Q  406 aatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagt 505  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||   |||||||| ||||| ||||||||||| ||||||||||| ||  |||||    
T  28139669 aatgatgtggacaagttcgtccaagcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggcttttacgagt 28139570  T
Q  506 gatggtg 512  Q
    || ||||    
T  28139569 gacggtg 28139563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 453
Target Start/End: Complemental strand, 26848989 - 26848741
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| || ||| |||||||| ||||||| ||   ||  | ||||||  | ||||| || ||||| |||  |||||||||  ||    
T  26848989 atggtggccagataagttagcagcatggttaagagctttcttccatttacgcaaacgctccatgctttccttgttattttgaaacacctcttcatgctta 26848890  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || |||||||| ||||||||||   | |||||||||||||||||||| || | |||| ||||||| || | ||| | || ||| |||| |||  |  | |    
T  26848889 gcaagtgcttcaccataactactattctgatgtcgcacatgagaaggttctatgccatagaaaacaggaataaccatgctacccttttccttggagcaat 26848790  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagtt 453  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  26848789 gaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagtt 26848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 517
Target Start/End: Original strand, 28098303 - 28098539
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||||||||||||||||||  |||||| |||||| |||||||| ||  | ||||||||||| |||||||| |||||| || | ||||  || |||||||    
T  28098303 ttttggaacctctcttcatgcttagctaatgcttcaccataactccccgtctgatgtcgcacgtgagaaggttccacgtcacaaaaaataggaaaaacga 28098402  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
     || ||| ||||  |  ||   ||||||||||||||||||||| |||||||||||| | ||||| ||||||||   ||| || || || || ||||||||    
T  28098403 agcaacccttttcttcgtaacggtgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcct 28098502  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatt 517  Q
     |||||||| ||||| ||| | || ||| ||||||||    
T  28098503 ggactcttcgatggccttgacaagggattgtgtgatt 28098539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 495
Target Start/End: Complemental strand, 28185695 - 28185405
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || |||||||||  ||||||| || ||||||||| ||| |  |||   |    
T  28185695 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgctatccttgttattttggaacttctttatatgatca 28185596  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  || ||||||  |||||||| || || ||  ||| |||  |  |||    
T  28185595 tccagtgctttaccataactgcccgtgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagt 28185496  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
     |||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || ||||| || |||||||||||||||||||||||    
T  28185495 taatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggc 28185405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 281 - 450
Target Start/End: Complemental strand, 26949914 - 26949745
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||||||||||||||||||  |||| |||||||| |||||||||    | ||||||||||| |||||||| || ||  || ||||||| |||| ||| |    
T  26949914 ttttggaacctctcttcatgcttagcaagtgcttcaccataactataattctgatgtcgcacgtgagaaggttctacatcatagaaaactggcagaacaa 26949815  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcata 450  Q
    ||||||| |||| |||  |  |||||||||| |||||||||||||| |||||||| || ||||| |||||    
T  26949814 ggcgacctttttccttgaagtagtgaatgatatggacaagttcgtctaaacaaaatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 419 - 528
Target Start/End: Complemental strand, 27229347 - 27229238
Alignment:
Q  419 agttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgattt 518  Q
    ||||||| ||||||||| || ||||| ||||||||||||||||| | ||| |||||||||| ||| || |||||||| ||| ||||||||||||||||||    
T  27229347 agttcgttcaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgattt 27229248  T
Q  519 catcccctct 528  Q
    | || |||||    
T  27229247 cgtctcctct 27229238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 453
Target Start/End: Complemental strand, 27214743 - 27214498
Alignment:
Q  211 gccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagt 310  Q
    |||||| |||||||| |||||| |||||||||||||||| || | || || |||||| || ||||| || ||||| ||||||||||||||  |||| ||     
T  27214743 gccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaagc 27214644  T
Q  311 gcttctccataactacctctat---gatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaa 407  Q
    ||||| ||||||||     | |   |||||||||  |||||||| || |||||| ||||||| || | ||| |||||||| |||| |||  |  | |||     
T  27214643 gcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgag 27214544  T
Q  408 tgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagtt 453  Q
    |||||||||||||||||||||||||||| || ||||  ||||||||    
T  27214543 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 453
Target Start/End: Original strand, 27234485 - 27234730
Alignment:
Q  211 gccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtagctagt 310  Q
    |||||| |||||||| |||||| |||||||||||||||| || | || || |||||| || ||||| || ||||| ||||||||||||||  |||| ||     
T  27234485 gccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaagc 27234584  T
Q  311 gcttctccataactacctctat---gatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaa 407  Q
    ||||| ||||||||     | |   |||||||||  |||||||| || |||||| ||||||| || | ||| |||||||| |||| |||  |  | |||     
T  27234585 gcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatgag 27234684  T
Q  408 tgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagtt 453  Q
    |||||||||||||||||||||||||||| || ||||  ||||||||    
T  27234685 tgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 404 - 518
Target Start/End: Original strand, 26341991 - 26342105
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga 503  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||   || || |  || || |||||||| |||||||||||||| ||| | |    
T  26341991 tgaatgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctggactcttcaatggctttgacaa 26342090  T
Q  504 gtgatggtgtgattt 518  Q
    ||||| |||||||||    
T  26342091 gtgattgtgtgattt 26342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 527
Target Start/End: Complemental strand, 28150069 - 28149945
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtc 501  Q
    ||||||| |||||||||||||||||||||||||| || ||||| | |||||||  ||| || |  || || |||||||| |||||||||||||| |||      
T  28150069 agtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaatcctggactcttcaatggccttg-a 28149971  T
Q  502 gagtgatggtgtgatttcatcccctc 527  Q
    |||||||||||||||||| |||||||    
T  28149970 gagtgatggtgtgatttcgtcccctc 28149945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 205 - 493
Target Start/End: Original strand, 28297571 - 28297859
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || ||||||||| |||| ||| || ||||||||| |||||  |||   |    
T  28297571 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctctatatgatca 28297670  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
     | |||||||   ||||||| ||    |||||||||||||||||||| |||||  || | ||||  |||||||| || || | | ||| |||  |  |||    
T  28297671 tccagtgctttagcataacttccatgttgatgtcgcacatgagaaggttccacatcataaaaaatcggcaaaactagacggctactttccttgaagcagt 28297770  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatg 493  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||| ||| || || || || |||||||||| ||||||||||    
T  28297771 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28297859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 205 - 493
Target Start/End: Complemental strand, 28514502 - 28514214
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| | ||| ||||||||  ||||||| || | || ||||||||| |||| ||| || ||||||||| |||||  |||   |    
T  28514502 atggtggccagagaagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaacttctctatatgatca 28514403  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
     | |||||||   ||||||| ||    |||||||||||||||||||| |||||  || | ||||  |||||||| || || | | ||| |||  |  |||    
T  28514402 tccagtgctttagcataacttccatgttgatgtcgcacatgagaaggttccacatcataaaaaatcggcaaaactagacggctactttccttgaagcagt 28514303  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatg 493  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||| ||| || || || || |||||||||| ||||||||||    
T  28514302 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatg 28514214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 528
Target Start/End: Original strand, 25506978 - 25507090
Alignment:
Q  416 acaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtga 515  Q
    |||||||| |||||||||||    |||||||||||||||  |||||  || || |||||||||||||| |||||||||||  || ||| |||||||||||    
T  25506978 acaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtga 25507077  T
Q  516 tttcatcccctct 528  Q
    ||||||| |||||    
T  25507078 tttcatctcctct 25507090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 453
Target Start/End: Complemental strand, 26811711 - 26811590
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaac 431  Q
    ||||||||||| |||||||| ||||| ||| ||||||| || | ||| |||||||| |||| |||  |  ||| ||||||||||||||| || || ||||    
T  26811711 tgatgtcgcacgtgagaaggttccacaccatagaaaactggtagaacaaggcgacctttttccttgaagtagttaatgatgtggacaagctcatctaaac 26811612  T
Q  432 aaaacgacgaagaggcatagtt 453  Q
    ||||||||||||  ||||||||    
T  26811611 aaaacgacgaagttgcatagtt 26811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 495
Target Start/End: Complemental strand, 28325683 - 28325520
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaac 431  Q
    ||||||||||| |||||||| |||||  |  ||||||| ||| |||| ||||| |||||||  ||  |  ||||||| |||||||||||||| ||||| |    
T  28325683 tgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaactaggcgcccattttctttgaagcagtgaataatgtggacaagttcatccaagc 28325584  T
Q  432 aaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    |||| || ||||| ||||| |||  ||| || |  || || |||||||||||||||||||||||    
T  28325583 aaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 28325520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 495
Target Start/End: Complemental strand, 2184417 - 2184327
Alignment:
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||    || || || ||||| ||||| || ||||||||||||||    
T  2184417 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggc 2184327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 26623712 - 26623636
Alignment:
Q  112 tttcccttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtag 188  Q
    |||||| ||||||| || | || |||||||| ||||||| ||| | ||||||||||||||||||| |||||||||||    
T  26623712 tttcccatttaagctttaagattgaatgatttaggaatataaaataaagaaggcaaaacaagattcaagtgaagtag 26623636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 26729689 - 26729613
Alignment:
Q  112 tttcccttttaagcatttatatggaatgattgaggaataaaaattgaagaaggcaaaacaagattgaagtgaagtag 188  Q
    |||||| ||||||| || | || |||||||| ||||||| ||| | ||||||||||||||||||| |||||||||||    
T  26729689 tttcccatttaagctttaagattgaatgatttaggaatataaaataaagaaggcaaaacaagattcaagtgaagtag 26729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 26975182 - 26975134
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagt 452  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||    
T  26975182 tgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 25071791 - 25071741
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagt 452  Q
    ||||||||||||||||||||||||| |||||||| || ||||| |||||||    
T  25071791 agtgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 519
Target Start/End: Complemental strand, 26937219 - 26937109
Alignment:
Q  409 gatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgat 508  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||  ||| || || || ||   |||||  || |||||||| || ||| | ||||||    
T  26937219 gatgtggacaagttcgtccaaacaaaatgaagaagtggcatagttgatagagaatacaggtatggcaatcccggaatcttcaattgccttgacaagtgat 26937120  T
Q  509 ggtgtgatttc 519  Q
    |||||||||||    
T  26937119 ggtgtgatttc 26937109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 2185027 - 2184980
Alignment:
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagt 452  Q
    ||||||| ||||||||||||||||||||||| || ||||| |||||||    
T  2185027 gaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 29826229 - 29826174
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgacc 387  Q
    ||||||||||||||||||||||||||  || ||||||  ||||||||||| |||||    
T  29826229 tgatgtcgcacatgagaaggatccacatcatagaaaataggcaaaacgagacgacc 29826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 25580038 - 25580004
Alignment:
Q  215 gacaagttagctgcttgggtaagagctatcttcca 249  Q
    ||||||||||| |||||||||||||||||||||||    
T  25580038 gacaagttagcagcttgggtaagagctatcttcca 25580004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 26635820 - 26635774
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcata 450  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||    
T  26635820 tgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 26741786 - 26741740
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcata 450  Q
    |||||||||||||||||||| |||||||||||| | ||||| |||||    
T  26741786 tgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 26959296 - 26959250
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcata 450  Q
    |||||||||||||||||||| |||||| ||||||| ||||| |||||    
T  26959296 tgaatgatgtggacaagttcatccaaataaaacgaagaagaagcata 26959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 28098215 - 28098273
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctct 263  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||||| || | ||||||||    
T  28098215 atggtggccggacaagttagctgcttggttaagagccatcttccatttatgcagcctct 28098273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 26937435 - 26937391
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttcca 249  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||    
T  26937435 atggtggccagacaagtttgccgcttggttaagagctatcttcca 26937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 317 - 528
Target Start/End: Original strand, 268314 - 268525
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    |||||||| || || |||||||| |  |||| ||||||||||||| |||| |||||||||| ||| ||||| |||| ||| ||  |||||||||||||||    
T  268314 ccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacgggcaaaatgagacgaccctttttcttgtagcagtgaatgatgtgga 268413  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  268414 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatggtttgat 268513  T
Q  517 ttcatcccctct 528  Q
    ||||||||||||    
T  268514 ttcatcccctct 268525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 162 - 495
Target Start/End: Original strand, 28127481 - 28127814
Alignment:
Q  162 aggcaaaacaagattgaagtgaagtaggctacccaggagaacgatggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcct 261  Q
    ||||||||||||||| ||||  |||||| ||||| |||  |  ||||| ||| ||||||||||| |||||||| |||||||||||||| |  | ||  |     
T  28127481 aggcaaaacaagatttaagtatagtagggtaccctggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcg 28127580  T
Q  262 ctccatattatcctttttgttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgcca 361  Q
    |||||| || | ||| || ||||||||||||||| ||||  |||| ||  |||| |||||||| ||| |||||| |||||||| || |||||||||||||    
T  28127581 ctccatgtttttcttgttattttggaacctctctccatgcttagcaagctcttcaccataactccctgtatgatatcgcacatcagtaggatccacgcca 28127680  T
Q  362 aagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaa 461  Q
    |||||||| |||||||| |||||||| |||  ||| ||  ||||||||||||| |||||||||||||||||||| || |||||||||||||||| |||||    
T  28127681 aagaaaacaggcaaaactaggcgaccctttgtcttgtagcagtgaatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaa 28127780  T
Q  462 acacggggataaaaatcctagactcttcaatggc 495  Q
    | || || |||||||| ||||| |||||||||||    
T  28127781 atacaggaataaaaattctagattcttcaatggc 28127814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 28164208 - 28164530
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| |||||||||||||| |  | ||  | |||||| || | ||| || ||||||||||||||  ||||  ||    
T  28164208 atggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctcaccatgctta 28164307  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    |  ||  |||  |||||||| ||| ||||||||||||||| || |||||||||||||| |||||| |||||||| |||||||| |||  ||| ||  |||    
T  28164308 gtaagatctttgccataactccctgtatgatgtcgcacatcagtaggatccacgccaa-gaaaacaggcaaaactaggcgaccctttgtcttgtagcagt 28164406  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||  ||| ||||| || |||||||| | ||| | ||||||||| |||  ||     
T  28164407 gaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttgatgaa 28164506  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    ||| ||||||||||| || |||||    
T  28164507 tgacggtgtgatttcttctcctct 28164530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 281 - 528
Target Start/End: Original strand, 14290 - 14536
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| | ||||||||||| | || ||| |||||||| |||||||| ||||||||||    
T  14290 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacga 14389  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcct 480  Q
    ||||||| |||  ||| ||  ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||| || |||||||||||    
T  14390 ggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcct 14488  T
Q  481 agactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||| || |||||||| |||  ||||||||||||||||||||| |||||    
T  14489 agattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 281 - 528
Target Start/End: Original strand, 3355 - 3603
Alignment:
Q  281 ttttggaacctctcttcatgtgtagctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacga 380  Q
    ||||| ||||||| ||||||   ||| | |||||| |||||||||||| || |||||||||||  || ||| ||||| ||||| ||||| |||| |||||    
T  3355 ttttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttccacaccaaataaaacaggcagaacga 3454  T
Q  381 ggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcata-gttggcagaaaacacggggataaaaatcc 479  Q
    ||||||| |||  ||| ||  |||||||||||||||||||||||||||||||||| || ||||||||||| ||||  ||||||||| || ||||||||||    
T  3455 ggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcc 3554  T
Q  480 tagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||| || |||||||| |||  ||||||||||||||||||||| |||||    
T  3555 tagattcatcaatggccttgaggagtgatggtgtgatttcatctcctct 3603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 4529 - 4852
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | || ||||||||| |||| ||| |  ||||| ||||||| ||||||   |    
T  4529 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctca 4628  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| |||||||||||| |  |||||||||| | || ||| |||||||| |||||||| ||||||||||||||||| |||  ||| ||  |||    
T  4629 gccaatgcttcaccataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 4728  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||||||  |  ||||||||| || |||||||||||||| || |||||||| |||  |||    
T  4729 gaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcggag 4828  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
     ||||||||||||||||| |||||    
T  4829 ggatggtgtgatttcatctcctct 4852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 205 - 528
Target Start/End: Original strand, 13490 - 13813
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | ||  | |||||| |||| ||| |  ||||| ||||||| |||||||  |    
T  13490 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 13589  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||| |||  ||| ||  | |    
T  13590 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 13689  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||| |||||||||||||| |||||    |||| ||| ||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  |||    
T  13690 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 13789  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    |||||||||||||||||| |||||    
T  13790 tgatggtgtgatttcatctcctct 13813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 317 - 528
Target Start/End: Original strand, 18679524 - 18679735
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    ||||||||||| || |||||||  |  |||| |||||||||| || ||||||| |||||||| || ||||| |||  ||| ||  |||||||||||||||    
T  18679524 ccataactaccactttgatgtcatatgtgagtaggatccacgacatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgaatgatgtgga 18679623  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| || || || |||||||||||||||||||||||||||||||||||| ||||    
T  18679624 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgat 18679723  T
Q  517 ttcatcccctct 528  Q
    ||||||||||||    
T  18679724 ttcatcccctct 18679735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 317 - 525
Target Start/End: Original strand, 18699357 - 18699565
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    |||||||| || || |||||||| |  |||| |||||| |||||| ||||||| ||||||||||| ||||| |||  ||| ||  ||||||||||||| |    
T  18699357 ccataactcccactttgatgtcgtatgtgagtaggatctacgccatagaaaacaggcaaaacgagacgaccttttgtcttgtagcagtgaatgatgtgaa 18699456  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| || || || |||||||||||||||||||||||||||||||||||| ||||    
T  18699457 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgat 18699556  T
Q  517 ttcatcccc 525  Q
    |||||||||    
T  18699557 ttcatcccc 18699565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 349 - 528
Target Start/End: Original strand, 18731493 - 18731672
Alignment:
Q  349 aggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggca 448  Q
    ||||||||||||| ||||||| |||||||| || ||||| |||  ||| ||  |||| ||||||||||||||||||||||||||||| || |||||||||    
T  18731493 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgtccaaacaaaatgaagaagaggca 18731592  T
Q  449 tagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||  ||||||||| || || || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18731593 tagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 18731672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 344 - 525
Target Start/End: Original strand, 18655461 - 18655642
Alignment:
Q  344 tgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaag 443  Q
    |||| ||||||||||||| ||||||| || |||||||| ||||| |||  ||| ||  ||||||||||| |||||||||||||||||||||| || ||||    
T  18655461 tgagtaggatccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtgaatgatgcggacaagttcgtccaaacaaaatgaagaag 18655560  T
Q  444 aggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccc 525  Q
    |||||||||||  ||||||||| || ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18655561 aggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcgagtgatggtttgatttcatcccc 18655642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 349 - 528
Target Start/End: Original strand, 18724074 - 18724253
Alignment:
Q  349 aggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggca 448  Q
    ||||||||||||| ||||||| |||||||| || ||||| |||  ||| ||  |||| ||||||||||||||||||| ||||||||| || |||||||||    
T  18724074 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgcatgatgtggacaagttcgttcaaacaaaatgaagaagaggca 18724173  T
Q  449 tagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    ||||||  ||||||||| || || || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18724174 tagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatggtttgatttcatcccctct 18724253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 492
Target Start/End: Complemental strand, 18073979 - 18073804
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||| ||| ||    || ||  |||||||||||||||    
T  18073979 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 18073880  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaat 492  Q
    |||||  |||||||||| | || ||||| ||||||||||||||||| | ||| || |||||||| || ||||||||    
T  18073879 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 18073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 5090915 - 5091059
Alignment:
Q  308 agtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaa 407  Q
    |||||||| |||||||| ||  | |||| ||||||||||||||| ||||| ||| ||||||  |||||||| |||| |||||||| |||  |  ||||||    
T  5090915 agtgcttcaccataacttccagtctgatatcgcacatgagaaggttccacaccatagaaaataggcaaaaccaggcaaccattttccttggagcagtgaa 5091014  T
Q  408 tgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagt 452  Q
    | || ||||||||||| || ||||||||||| ||||| |||||||    
T  5091015 taatatggacaagttcatctaaacaaaacgaagaagaagcatagt 5091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 492
Target Start/End: Original strand, 17989095 - 17989185
Alignment:
Q  402 agtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaat 492  Q
    ||||||||||||||||||||  |||||||||| | || ||||| ||||||||||||||||| | ||| || |||||||| || ||||||||    
T  17989095 agtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 17989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 317 - 528
Target Start/End: Original strand, 29273740 - 29273951
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    |||||||| || || |||||||| |  |||| ||||||||||||| |||| || ||||||| ||| ||||| |||  ||| ||  |||||||||||||||    
T  29273740 ccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtgaatgatgtgga 29273839  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgat 516  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||||    
T  29273840 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcgagtgatgatttgat 29273939  T
Q  517 ttcatcccctct 528  Q
    ||||||||||||    
T  29273940 ttcatcccctct 29273951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 205 - 528
Target Start/End: Complemental strand, 7854 - 7531
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| ||| ||||||||||| |||||||| ||||| | |||||| |  | ||  | |||||| |||| ||| |  ||||| ||||||| |||||||  |    
T  7854 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 7755  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || | |||||| ||||||| |||| ||||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||| | |  ||| ||  | |    
T  7754 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttctgtcttgtagcaat 7655  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    |||| ||||| |||||||||||||| |||||    |||| ||| ||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  |||    
T  7654 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggag 7555  T
Q  505 tgatggtgtgatttcatcccctct 528  Q
    |||||||||||||||||| |||||    
T  7554 tgatggtgtgatttcatctcctct 7531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 205 - 527
Target Start/End: Complemental strand, 35054 - 34732
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| ||||||| || ||| |||||||| |||||||| || | || ||||||||| |||||||| || ||||||||| ||| |  |||   |    
T  35054 atggtggccagaaaagttagatgtttgagtaagagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatca 34955  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
     | |||||||  |||||||| ||  | ||||||||||| |||||||| |||||  || ||||||  |||||||| || || ||  ||| |||  |  |||    
T  34954 tccagtgctttaccataactgcccttgtgatgtcgcacgtgagaaggttccacatcatagaaaattggcaaaactagacgcccgctttccttgaagcagt 34855  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||||||||||||||| |||   ||    
T  34854 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaag 34755  T
Q  505 tgatggtgtgatttcatcccctc 527  Q
    ||||||||| |||||||| ||||    
T  34754 tgatggtgttatttcatctcctc 34732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 527
Target Start/End: Complemental strand, 27776 - 27455
Alignment:
Q  206 tggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgtag 305  Q
    |||| |||||| |||||||| | ||| |||||||| |||||||| || | || ||| |||||  ||| ||| || |||||||||||||||  |||   |     
T  27776 tggtggccagagaagttagcagtttgagtaagagcaatcttccatttctgcaacctatccatgctatgcttgttattttggaacctctctatatgatcat 27677  T
Q  306 ctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtg 405  Q
    | |||||||  |||||||| ||  | |||||||||||||||||||| |||||  || ||||||  |||||||| ||||| | ||||| |||  |  | ||    
T  27676 ccagtgctttaccataactgcccttgtgatgtcgcacatgagaaggttccacatcatagaaaattggcaaaacaaggcgccgattttccttgaagcaatg 27577  T
Q  406 aatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagt 505  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||| ||||||||| | |||   |||    
T  27576 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagt 27477  T
Q  506 gatggtgtgatttcatcccctc 527  Q
    |||| ||| |||||||| ||||    
T  27476 gatgatgttatttcatcacctc 27455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 518
Target Start/End: Complemental strand, 43295 - 42982
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||||| ||| || |||||  ||||||| || | || ||||||||| |||||| |  | ||||||||| ||||   |||   |    
T  43295 atggtggccagagaagttagctgtttgagttagagcactcttccatttctgcaacctctccatgttatccgtgctattttggaacttctcaatatgctca 43196  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagt 404  Q
    || |||||||  |||||||| ||  | ||||||| ||| | |||||| |||||  || ||||||  |||||||| ||||| ||||||| |||  |  |||    
T  43195 gccagtgctttaccataactgccaatctgatgtctcacgttagaaggttccacatcatagaaaattggcaaaactaggcgtccatttttcttgcagcagt 43096  T
Q  405 gaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgag 504  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||  ||| || || || || ||||||||||||||||||||||| |||   ||    
T  43095 gaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaag 42996  T
Q  505 tgatggtgtgattt 518  Q
    ||||||||| ||||    
T  42995 tgatggtgttattt 42982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 495
Target Start/End: Complemental strand, 116998 - 116835
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaac 431  Q
    ||||||||||| |||||||| |||||  |  ||||||| ||| |||| ||||| |||||||  ||  |  ||||||| |||||||||||||| ||||| |    
T  116998 tgatgtcgcacgtgagaaggttccacatcgtagaaaactggctaaactaggcgcccattttctttgaagcagtgaataatgtggacaagttcatccaagc 116899  T
Q  432 aaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggc 495  Q
    |||| || ||||| ||||| |||  ||| || |  || || |||||||||||||||||||||||    
T  116898 aaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggc 116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 492
Target Start/End: Complemental strand, 59787 - 59612
Alignment:
Q  317 ccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtgga 416  Q
    ||||| |||||| ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||| ||| ||    || ||  |||||||||||||||    
T  59787 ccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtgga 59688  T
Q  417 caagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaat 492  Q
    |||||  |||||||||| | || ||||| ||||||||||||||||| | ||| || |||||||| || ||||||||    
T  59687 caagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 59612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 519
Target Start/End: Original strand, 58267 - 58454
Alignment:
Q  332 tgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaac 431  Q
    ||||||||||| |||||||| |||||| || ||||||  |||||||| ||||| |||| || ||   |  |||||||||||||||||||||||| ||| |    
T  58267 tgatgtcgcacgtgagaaggttccacgtcatagaaaattggcaaaactaggcgcccatattcctcgaagcagtgaatgatgtggacaagttcgttcaagc 58366  T
Q  432 aaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttc 519  Q
    |||| || ||||| |||||||||  ||| || ||||| || |||||||||||||||| |||||| |||   ||||||||||| |||||    
T  58367 aaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggccttgaaaagtgatggtgttatttc 58454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 527
Target Start/End: Complemental strand, 3279818 - 3279695
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcga 503  Q
    ||||||||||||||||||||||||||||||||    ||||| |||||||||  ||| || || || ||||||||| | |||||||| ||||| ||| | |    
T  3279818 tgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggccttgacaa 3279719  T
Q  504 gtgatggtgtgatttcatcccctc 527  Q
    ||||| ||||||||||||| ||||    
T  3279718 gtgattgtgtgatttcatcacctc 3279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 351
Target Start/End: Original strand, 17993542 - 17993688
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttccacttttccagcctctccatattatcctttttgttttggaacctctcttcatgtgta 304  Q
    ||||| |||||| |||||||| |||||| |||||||| ||||||| ||   || || |||||| || |||||  | ||||| || | |||||||||  ||    
T  17993542 atggtggccagataagttagcagcttggttaagagctttcttccatttcaacaaccgctccatgttttccttgctattttgaaaaccctcttcatgctta 17993641  T
Q  305 gctagtgcttctccataactacctctatgatgtcgcacatgagaagg 351  Q
    || |||||||| ||||||||| |  | ||||||||||| ||||||||    
T  17993642 gcaagtgcttcaccataactatcattctgatgtcgcacctgagaagg 17993688  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 452
Target Start/End: Original strand, 17993741 - 17993789
Alignment:
Q  404 tgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggcatagt 452  Q
    ||||||||||||||||||||||| |||||||| || ||||| |||||||    
T  17993741 tgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 3280032 - 3279988
Alignment:
Q  205 atggtcgccagacaagttagctgcttgggtaagagctatcttcca 249  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||||||    
T  3280032 atggtggccggacaagttagctgcttggttaagagccatcttcca 3279988  T

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Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 518
Target Start/End: Complemental strand, 16689234 - 16689027
Alignment:
Q  311 gcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgc--ttatacaagtgaat 408  Q
    ||||| |||||||| ||  | ||||||| |||||| |||||||||||| || ||||||| |||||||| || ||||| ||||||  | |  | | | |||    
T  16689234 gcttcaccataacttccaatctgatgtctcacatgcgaaggatccacgtcatagaaaacaggcaaaactagccgacc-ttttgcactgaagcca-tcaat 16689137  T
Q  409 gatgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgat 508  Q
    ||||| ||||||||| |||||||||||||| ||| | ||||||||   |||||||||||||||   |||||| || |||||||| || |||   ||||||    
T  16689136 gatgttgacaagttcatccaaacaaaacgaggaaaatgcatagttcttagaaaacacggggattgcaatccttgagtcttcaattgccttgataagtgat 16689037  T
Q  509 ggtgtgattt 518  Q
    ||||||||||    
T  16689036 ggtgtgattt 16689027  T

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Target: scaffold1254 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 440 - 528
Target Start/End: Original strand, 10 - 98
Alignment:
Q  440 gaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatggtgtgatttcatcccctct 528  Q
    |||| ||| ||||||  ||||||||| || |||||||||||||| ||||| ||||| |||  ||||||||||||||||||||| |||||    
T  10 gaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctct 98  T

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