View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19238_low_14 (Length: 251)
Name: NF19238_low_14
Description: NF19238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19238_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 23344508 - 23344731
Alignment:
| Q |
18 |
attctcttcactagttccatcaaaatcaggttgaagaacattgatgtcatcttcagacatagcaatatctttccatatatcatccattgagtacccttgt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23344508 |
attctcttcactagttccatcaaaatcaggttgaagaacattgatgtcatcttcagacatagcaatatctttccatatatcatccattgagtacccttgt |
23344607 |
T |
|
| Q |
118 |
tcaatttcttgtacttggtaattttcttcttcagactctttgttggaagcatgtgaatccacaccatggttactatttgagaaatgtgaggattgacaac |
217 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23344608 |
tcaatttcttggacttggtaattttcttcttcagactctttgttggaagcatgtgaatccacaccatggttactatttgagaaatgtgaggattgacaac |
23344707 |
T |
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| Q |
218 |
tagaagattgatcaggtgatgatg |
241 |
Q |
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|||||||||||||||||||||||| |
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| T |
23344708 |
tagaagattgatcaggtgatgatg |
23344731 |
T |
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