View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19239_low_30 (Length: 286)
Name: NF19239_low_30
Description: NF19239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19239_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 2422904 - 2422646
Alignment:
| Q |
11 |
atcatcatcaagcaatcctaatcccaatttgaacaaaacgatatttcaaacctttaaatccaacttgcatgaacaattggtttttcagacaatggttcgt |
110 |
Q |
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| T |
2422904 |
atcatcatcaagcaatcctaatcccaatttgaacaaaacgatatttcaaacctttaaatccaacttgcatgaacaattggtttttcagacaatggtttgt |
2422805 |
T |
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| Q |
111 |
aatttcattcaacaaaaaatgggcttaaaaaattgcaaaatataagttaggcttatttggaactagctatacaaaaattatcgagaatcaagaatcaagc |
210 |
Q |
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| T |
2422804 |
aatttcattcaacaaaaaatgggcttaaaaaattgcaaaatataagttaggcttatttggaactagctatacaaaaattatcgagaatcaagaatcaagc |
2422705 |
T |
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| Q |
211 |
aaagtatttatgacttaacatagtaccccttttatggtggtcgacatgacatgaagaat |
269 |
Q |
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| T |
2422704 |
aaagtatttatgacttaacatagtaccccttttatggtggtcgacatgacatgaagaat |
2422646 |
T |
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