View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19239_low_38 (Length: 249)
Name: NF19239_low_38
Description: NF19239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19239_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 37061326 - 37061568
Alignment:
| Q |
1 |
acgttaccggaaaacgttttttcaccgctacttcatttggatttgaaaaacaacgtactaacaggaacgttaccaacgtcatttccgttatctctacgtt |
100 |
Q |
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| T |
37061326 |
acgttaccggaaaacgttttttcaccgctacttcatttggatttgaaaaacaacgtactaacaggaacgttaccaacgtcatttccgttatctctacgtt |
37061425 |
T |
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| Q |
101 |
atctttcgttatcacagaatcaaatgtggggtccacttaccaacggaacactagagtcgctttcagatttggagtttcttgacctgagcatgaatcaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37061426 |
atctttcgttatcacagaatcaaatgtggggtccacttaccaacggaacactagagtcgctttcagatttggagtttcttgacctgagcatgaatcaatt |
37061525 |
T |
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| Q |
201 |
tactgggcctattccagcccagctcttcttcaggcctatgctt |
243 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37061526 |
tactgggcctattccagcccagctcttcttcaggcccatgctt |
37061568 |
T |
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