View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19240_high_13 (Length: 380)
Name: NF19240_high_13
Description: NF19240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19240_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 60 - 361
Target Start/End: Complemental strand, 45457849 - 45457548
Alignment:
| Q |
60 |
taggatgaatgaatgaatacaaacaagtatttggaagaataagcgattaagacaatgcttgtgcttgttcaaattctatggacggacggagcatactaag |
159 |
Q |
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| T |
45457849 |
taggatgaatgaatgaatacaaacaagtatttggaagaataagcgattaagacaatgcttgtgcttgttcaaattctatggacggacggagcatactaag |
45457750 |
T |
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| Q |
160 |
tactgtaattaataagaagagaagaaaagatgatctgatcacacacttgtattaattctttctttttctctatagagtcatagatagagtatggtgaact |
259 |
Q |
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| T |
45457749 |
tactgtaattaataagaagagaagaaaagatgatctgatcacacacttgtattaattctttctttttctctatagagtcagagatagagtatggtgaact |
45457650 |
T |
|
| Q |
260 |
agatcagtagcatatacccctacactacactacattatattacacgtatgaatatgatgatatcaatatcaacacatatgttatgatattgactcacagt |
359 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45457649 |
agatcagtagcatatacccctacactacactacattatattacacgtatgaatatgatgatatcaatatcaacacatatgttatgatattgactcacagt |
45457550 |
T |
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| Q |
360 |
ca |
361 |
Q |
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| T |
45457549 |
ca |
45457548 |
T |
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