View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19240_high_18 (Length: 329)
Name: NF19240_high_18
Description: NF19240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19240_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 42751897 - 42751600
Alignment:
| Q |
1 |
attggcctcttggacctactctctccatactctatgagaacttggttatgtagagcttaatttgcnnnnnnnnn-cctctccttttctggctttgtaatt |
99 |
Q |
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| T |
42751897 |
attggcctcttggacctactctctccatactctatgagaacttggttatgtagagcttaatttgcttttttttttcctctccttttctggctttgtaatt |
42751798 |
T |
|
| Q |
100 |
ttagtcttttaaccnnnnnnntcaataaattgtaaagctacatctatataatttctaatcaaaaattgcaacatgaacaattgaaaattctaattaaatt |
199 |
Q |
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|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42751797 |
ttagtcttttaaccaaaaaaatcaataaattgtaaagctagatctatataatttctaatcaaaaattgcaacatgaacaattgaaaattctaattaaatt |
42751698 |
T |
|
| Q |
200 |
aagtatcttctctttcatcatccataaaattatgactattaaatatgattcatcaaaagacaacaatattgattcaagtatagcaccatctcctctcg |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42751697 |
aagtatcttctctttcatcatccataaaattatgactattaaatatgattcatcaaaagacaacaatattgattcaagtatagcaccatctcctctcg |
42751600 |
T |
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