View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19240_low_19 (Length: 326)
Name: NF19240_low_19
Description: NF19240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19240_low_19 |
 |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 7927852 - 7927555
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaatagcttttgcaaagttatacataaatgcttatcgggataaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7927852 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaatagcttttgcaaagttatacataaatgcttatcgggataaga |
7927753 |
T |
 |
| Q |
101 |
gctttgtgttataagttgtaaataagttgtttatccaaacatatccatagtttcggtttccaataagctgacattaaacaacataaaattgaagacttat |
200 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||| | |||| ||||||||||| |
|
|
| T |
7927752 |
gcttcgtgttataagttgtgaataagttgtttatccaaacatatccatagtttcgg-----aatttactggcatggca----ataa---tgaagacttat |
7927665 |
T |
 |
| Q |
201 |
tttactggcatttgactttggaatttttaaggatttgtaccgttagaacaacatatatttgtattagttataagatttctgagtgaaattgttgaatgac |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7927664 |
tttactggcatttgactttggaatttctaaggatttgtaccgttagaacaacatatatttgtattagttataagatttctgagtgaaattgttgaatgac |
7927565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 1510369 - 1510508
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa-tagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
|||||||||||| | |||||| ||||| || ||| |||||| || ||||||| ||||| |||||||||||| ||||| |||| |||||||| |||||| |
|
|
| T |
1510369 |
aaacaacttataacctatacaaaaacaattgaacattattt-atcttttgttttaaaaatagcttttgcaagcttatatataagtgcttatcaagataag |
1510467 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
|| ||||| |||||| | ||||||| |||||||||||||| |
|
|
| T |
1510468 |
cgc-ttgtgctataagatacaaataagctgtttatccaaaca |
1510508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17603443 - 17603484
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttt |
42 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
17603443 |
aaacaacttatagcatatacaaaaacaatttaacgttatttt |
17603484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 46423188 - 46423150
Alignment:
| Q |
104 |
ttgtgttataagttgtaaataagttgtttatccaaacat |
142 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
46423188 |
ttgtgttataagctgcaaataagttgtttatccaaacat |
46423150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 37473402 - 37473270
Alignment:
| Q |
9 |
tatagcatatacacaaacattttaacgttattttattttttgttataaaa-tagcttttgcaaagttatacataaatgcttatcgggataagagctttgt |
107 |
Q |
| |
|
||||||||||||| |||| ||||| || |||||| |||| ||||||| |||||| || || |||||||||| ||||| || ||||||| ||| || |
|
|
| T |
37473402 |
tatagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaactt-gt |
37473304 |
T |
 |
| Q |
108 |
gttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
| ||||| || |||||||||||||||||||||| |
|
|
| T |
37473303 |
gcaataagctgcaaataagttgtttatccaaaca |
37473270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 15477585 - 15477541
Alignment:
| Q |
5 |
aacttatagcatatacacaaacattttaacgttattttatttttt |
49 |
Q |
| |
|
||||||||||||||||| ||||| |||||| ||||||||| |||| |
|
|
| T |
15477585 |
aacttatagcatatacaaaaacaatttaactttattttatctttt |
15477541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 37517257 - 37517345
Alignment:
| Q |
5 |
aacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagcttttgcaaagttatacataaatgcttatcg |
92 |
Q |
| |
|
|||||||| ||||||| ||||| |||||| ||||||||| ||||| |||| ||||| ||| ||| | ||||||||||| |||||||| |
|
|
| T |
37517257 |
aacttataatatatacaaaaacaatttaactttattttatattttggtatagaaataacttatgcgagcttatacataaacgcttatcg |
37517345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38578538 - 38578474
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagctt |
64 |
Q |
| |
|
|||||||||||||| |||||| ||| | |||||| |||| |||| |||||||||| ||||||||| |
|
|
| T |
38578538 |
aaacaacttatagcttatacaaaaataatttaactttatgttatcttttgttatagaaatagctt |
38578474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 50681148 - 50681288
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| ||||||||| || | ||| ||||||||||||| || ||||||||||| ||||||| |||||| |
|
|
| T |
50681148 |
aaacaacttatagcatatacaaaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatgataag |
50681247 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
| ||||| |||||| | ||||||||||||||||||||||| |
|
|
| T |
50681248 |
ttc-ttgtgctataagctataaataagttgtttatccaaaca |
50681288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 43505945 - 43505828
Alignment:
| Q |
23 |
aaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgcttatcgggataagagctttgtgttataagttgtaa |
121 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||| |||||||||| ||||| |||||||||| |||||||| ||| | |||||| ||||||||| || |
|
|
| T |
43505945 |
aaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgatgcg---tttgtgctataagttgcaa |
43505849 |
T |
 |
| Q |
122 |
ataagttgtttatccaaacat |
142 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
43505848 |
ataagttgtttatccaaacat |
43505828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54069476 - 54069564
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgctt |
88 |
Q |
| |
|
|||||| |||||||||||||| ||||| |||||| ||||||||| ||||| ||| |||||||| | ||||| |||||||||| ||||| |
|
|
| T |
54069476 |
aaacaaattatagcatatacaaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctt |
54069564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31076445 - 31076527
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataa |
82 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||| ||||||||| ||||| | | |||||||||| ||||| |||||||||| |
|
|
| T |
31076445 |
aaacaatttatagcatatacaaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataa |
31076527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 1433027 - 1432986
Alignment:
| Q |
103 |
tttgtgttataagttgtaaataagttgtttatccaaacatat |
144 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
1433027 |
tttgtgttataaactttaaataagttgtttatccaaacatat |
1432986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39691202 - 39691251
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttg |
50 |
Q |
| |
|
||||||||||||||||||||| || |||||||| ||||||||| ||||| |
|
|
| T |
39691202 |
aaacaacttatagcatatacaaaacaattttaacattattttatcttttg |
39691251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 44797800 - 44797763
Alignment:
| Q |
104 |
ttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
44797800 |
ttgtgctataagttgcaaataagttgtttatccaaaca |
44797763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 47119097 - 47119134
Alignment:
| Q |
104 |
ttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
47119097 |
ttgtgctataagttgcaaataagttgtttatccaaaca |
47119134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30956685 - 30956826
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
|||||||||||||| |||||| ||||| |||||| ||||||||| ||||| |||| ||||||||| || || |||| |||||||||||||| |||||| |
|
|
| T |
30956685 |
aaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataag |
30956784 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaacat |
142 |
Q |
| |
|
| ||||| |||||| || ||||||| ||||||||||||||| |
|
|
| T |
30956785 |
-cccttgtgctataagctgcaaataagctgtttatccaaacat |
30956826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30972497 - 30972638
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
|||||||||||||| |||||| ||||| |||||| ||||||||| ||||| |||| ||||||||| || || |||| |||||||||||||| |||||| |
|
|
| T |
30972497 |
aaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataag |
30972596 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaacat |
142 |
Q |
| |
|
| ||||| |||||| || ||||||| ||||||||||||||| |
|
|
| T |
30972597 |
-cccttgtgctataagctgcaaataagctgtttatccaaacat |
30972638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5331304 - 5331215
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaatagcttttgcaaagttatacataaatgcttat |
90 |
Q |
| |
|
||||||||||||||| || | |||| |||||||||||||| | ||||| ||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
5331304 |
aaacaacttatagcaattagaagaacaatttaacgttattttctcttttgctataaaatagcttatgcaagcttatacataagtgcttat |
5331215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29520538 - 29520627
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaatagcttttgcaaagttatacataaatgcttat |
90 |
Q |
| |
|
||||||||||||||| || | |||| |||||||||||||| | ||||| ||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
29520538 |
aaacaacttatagcaattagaagaacaatttaacgttattttctcttttgctataaaatagcttatgcaagcttatacataagtgcttat |
29520627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49034322 - 49034379
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| |||||||| ||||| ||||||| |
|
|
| T |
49034322 |
aaacaacttatagcatatgcacaaacaatttaacggtattttatcttttgctataaaa |
49034379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20170534 - 20170485
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttg |
50 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| ||||||||| ||||| |
|
|
| T |
20170534 |
aaacaacttatagcatatacaaaaacaatttaacattattttatcttttg |
20170485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 35959515 - 35959655
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
|||||||||| |||||||||| ||| | |||||| ||||||||| ||| |||| ||||||||| || | |||||||||| |||||| |||||| |
|
|
| T |
35959515 |
aaacaacttacagcatatacaaaaataatttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataag |
35959614 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||| ||| |||||| || ||||||| |||||||||||||| |
|
|
| T |
35959615 |
agctt-gtgatataagctgcaaataagctgtttatccaaaca |
35959655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 39980740 - 39980649
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgcttatc |
91 |
Q |
| |
|
|||||||||||||||| | || ||||| |||||||||||| ||| || || ||| |||| |||| |||||| |||||||||| |||||||| |
|
|
| T |
39980740 |
aaacaacttatagcatgttcaaaaacaatttaacgttattgtatgttctgctataaaaaaagctaatgcaaacttatacataagtgcttatc |
39980649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 16272738 - 16272704
Alignment:
| Q |
30 |
ttaacgttattttattttttgttataaaatagctt |
64 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16272738 |
ttaactttattttattttttgttataaaatagctt |
16272704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 21335606 - 21335560
Alignment:
| Q |
95 |
ataagagctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||| |||||||||||||| |
|
|
| T |
21335606 |
ataagcgctttgtgatataagttgcaaataagctgtttatccaaaca |
21335560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 14145919 - 14145866
Alignment:
| Q |
5 |
aacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
|||||||||||||||| ||||| |||||| ||||||||| || |||||||||| |
|
|
| T |
14145919 |
aacttatagcatatacgaaaacaatttaactttattttatcttctgttataaaa |
14145866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20257546 - 20257505
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttt |
42 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
20257546 |
aaacaacttatagcatatacaaaaacaatttaactttatttt |
20257505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 944420 - 944364
Alignment:
| Q |
85 |
gcttatcgggataagagctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||||| |||||| ||| |||||||||| || |||||||||||||||||||||| |
|
|
| T |
944420 |
gcttatcatgataagcacttagtgttataagctgcaaataagttgtttatccaaaca |
944364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4401058 - 4400975
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat--aaaatagcttttgcaaagttatacataa |
82 |
Q |
| |
|
|||||||||||||||||||| ||| | ||||||||||||| | ||||| ||| |||| ||||| |||||| |||||||||| |
|
|
| T |
4401058 |
aaacaacttatagcatatacgaaaataatttaacgttatttcaccttttggtataaaaaaaagcttatgcaaacttatacataa |
4400975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44061082 - 44061146
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata-aaatagctt |
64 |
Q |
| |
|
|||||||||||||| |||| | ||||| |||||| ||||||||| ||||| |||| ||||||||| |
|
|
| T |
44061082 |
aaacaacttatagcttatagaaaaacaatttaaccttattttatcttttgctatagaaatagctt |
44061146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39659568 - 39659707
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaatagcttttgcaaagttatacataaatgcttatcgggataaga |
100 |
Q |
| |
|
|||||| ||||| |||| ||| ||||| |||||||||||| ||| |||||||||||||||| | | |||| |||||||||| ||||||| |||||| |
|
|
| T |
39659568 |
aaacaagttataacatagacaaaaacaatttaacgttattgtatcttttgttataaaatagtgtatccaaacttatacataagcgcttatcatgataag- |
39659666 |
T |
 |
| Q |
101 |
gctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
|||||| | |||| || |||||||||||||||||||||| |
|
|
| T |
39659667 |
catttgtgctctaagctgcaaataagttgtttatccaaaca |
39659707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 41407309 - 41407172
Alignment:
| Q |
5 |
aacttatagcatatacacaaa-cattttaacgttattttattttttgttata-aaatagcttttgcaaagttatacataaatgcttatcgggataagagc |
102 |
Q |
| |
|
||||||||||||||||| ||| || |||||| ||||||||| ||||| || | ||||||||| || || |||||||||| |||||||| |||||| || |
|
|
| T |
41407309 |
aacttatagcatatacaaaaaacaatttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgc |
41407210 |
T |
 |
| Q |
103 |
tttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
|| ||| |||||| || ||| ||| |||||||||||||| |
|
|
| T |
41407209 |
tt-gtgctataagctgcaaacaagctgtttatccaaaca |
41407172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 42420356 - 42420410
Alignment:
| Q |
4 |
caacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
42420356 |
caacttatatcatatacaaaaacaatttaacgttattttatcttttgctataaaa |
42420410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32592597 - 32592463
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa-tagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
|||||||||||||| |||||| ||||| |||||| ||||||||| |||| ||||||| ||| || ||||| |||||||||| |||||| |||||| |
|
|
| T |
32592597 |
aaacaacttatagcgtataca-aaacaatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataag |
32592499 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatcc |
136 |
Q |
| |
|
| |||||| |||||| | ||||||||||||||||| |
|
|
| T |
32592498 |
tg-tttgtgctataagctacaaataagttgtttatcc |
32592463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 39073753 - 39073796
Alignment:
| Q |
6 |
acttatagcatatacacaaacattttaacgttattttatttttt |
49 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
39073753 |
acttatagcatatacaaaaacaatttaacgttattttatctttt |
39073796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10490640 - 10490598
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttta |
43 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
10490640 |
aaacaccttatagcatatacagaaacaatttaacgttatttta |
10490598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36114582 - 36114636
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata |
55 |
Q |
| |
|
||||||||||| || |||||| ||||| |||||| ||||||||| |||||||||| |
|
|
| T |
36114582 |
aaacaacttattgcttatacaaaaacaatttaactttattttatcttttgttata |
36114636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41851546 - 41851498
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttatttttt |
49 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| ||||| ||| |||| |
|
|
| T |
41851546 |
aaacaacttatagcatatacaaaaacaatttaactttattgtatctttt |
41851498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 420371 - 420283
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaa-atagcttttgcaaagttatacataaatgctt |
88 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||| ||||||||| ||||| |||||| ||||||| ||||| ||||||||||| |||| |
|
|
| T |
420371 |
aaacaacttatagcatatacaaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataaacgctt |
420283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45338460 - 45338390
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaa |
70 |
Q |
| |
|
|||||||||| |||||||||| ||||| ||||| |||||||||||||||| ||| |||||| ||| ||||| |
|
|
| T |
45338460 |
aaacaacttacagcatatacaaaaacaatttaaggttattttattttttgctatgaaaataacttatgcaa |
45338390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45806536 - 45806626
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaa-atagcttttgcaaagttatacataaatgcttat |
90 |
Q |
| |
|
||||||||||||||| || | ||||| |||||||||||||| | ||||| |||||| ||||||| ||||| |||||||||| ||||||| |
|
|
| T |
45806536 |
aaacaacttatagcaattagaaaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttat |
45806626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 119921 - 119873
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttatttttt |
49 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| ||||||||| |||| |
|
|
| T |
119921 |
aaacaacttatagcatttacacaaacaatttaactttattttatctttt |
119873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34083584 - 34083638
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttata |
55 |
Q |
| |
|
||||| |||||||| |||||||||||| |||||| ||||||||| ||||| |||| |
|
|
| T |
34083584 |
aaacagcttatagcttatacacaaacaatttaactttattttatcttttgctata |
34083638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20258523 - 20258466
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
||||||||||||||| |||| ||||| |||||| ||||||||| ||||| ||||||| |
|
|
| T |
20258523 |
aaacaacttatagcaattacaaaaacaatttaacattattttatcttttgctataaaa |
20258466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 28613594 - 28613650
Alignment:
| Q |
2 |
aacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
||||||||||| | |||||| ||||| |||||| || |||||| ||||||||||||| |
|
|
| T |
28613594 |
aacaacttataacttatacaaaaacaatttaactttgttttatcttttgttataaaa |
28613650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 33287754 - 33287718
Alignment:
| Q |
103 |
tttgtgttataagttgtaaataagttgtttatccaaa |
139 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
33287754 |
tttgtgctataagttgtaaataaattgtttatccaaa |
33287718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16458038 - 16458141
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| |||||||||| ||||| ||| |||||||||| ||||| ||||| |||| |||||| ||||||| |
|
|
| T |
16458038 |
aaacaacttatagcatatacaaaaacaatttaa-gttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcaggataag |
16458136 |
T |
 |
| Q |
100 |
agctt |
104 |
Q |
| |
|
||||| |
|
|
| T |
16458137 |
agctt |
16458141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16937942 - 16937990
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttatttttt |
49 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
16937942 |
aaacaacttatagcatatacaaaaacaatttaacgttattttatctttt |
16937990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29925852 - 29925782
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaa |
70 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||| |||||||| ||||| ||| |||||||||| ||||| |
|
|
| T |
29925852 |
aaacaacttatagcacatacagaaacaatttaacgctattttatcttttgctataaaaatagcttatgcaa |
29925782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 12433532 - 12433574
Alignment:
| Q |
104 |
ttgtgttataagttgtaaataagttgtttatccaaacatatcc |
146 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||| |||| |
|
|
| T |
12433532 |
ttgtgttataagctgcaaataagttgtttatccaaacagatcc |
12433574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32372635 - 32372494
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataa-aatagcttttgcaaagttatacataaatgcttatcgggataag |
99 |
Q |
| |
|
||||| ||||||||||||||| ||||| || ||| ||||||||| || ||||| ||||| || || || ||||||||| ||||||| |||||| |
|
|
| T |
32372635 |
aaacagcttatagcatatacaaaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatgataag |
32372536 |
T |
 |
| Q |
100 |
agctttgtgttataagttgtaaataagttgtttatccaaacat |
142 |
Q |
| |
|
|||| ||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
32372535 |
tgctt-gtgctataagctgcaaataagttgtttatccaaacat |
32372494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34102373 - 34102438
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttta--ttttttgttataaaatagctt |
64 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| |||||||| ||||||||| |||||||||| |
|
|
| T |
34102373 |
aaacaacttatagcatatacaaaaacaaattaacattattttatcttttttgtttaaaaatagctt |
34102438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 14956409 - 14956494
Alignment:
| Q |
55 |
aaaatagcttttgcaaagttatacataaatgcttatcgggataagagctttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
|||||||||| ||||| |||||||||| |||||||| |||||| | || ||| |||||| || |||||||||||||||||||||| |
|
|
| T |
14956409 |
aaaatagcttatgcaagcttatacataagtgcttatcatgataagcgatt-gtgctataagctgcaaataagttgtttatccaaaca |
14956494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 41475182 - 41475248
Alignment:
| Q |
73 |
ttatacataaatgcttatcgggataagagctttgtgttataagttgtaaataagttgtttatccaaac |
140 |
Q |
| |
|
|||||||||| |||||||| || ||| | ||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
41475182 |
ttatacataagtgcttatcatgacaagtg-tttgtcttataagttgcaaataagttgtttatccaaac |
41475248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 34236081 - 34236043
Alignment:
| Q |
103 |
tttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
34236081 |
tttgtgttataagctgcaaataagttgtttatccaaaca |
34236043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 10758317 - 10758358
Alignment:
| Q |
3 |
acaacttatagcatatacacaaacattttaacgttattttat |
44 |
Q |
| |
|
||||||||||||||||||| ||||| |||||| ||||||||| |
|
|
| T |
10758317 |
acaacttatagcatatacaaaaacaatttaactttattttat |
10758358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 22790542 - 22790501
Alignment:
| Q |
110 |
tataagttgtaaataagttgtttatccaaacatatccatagt |
151 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
22790542 |
tataagctgtaaataagttgtttatccaaacaggtccatagt |
22790501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28385321 - 28385265
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
||||||||||||||||||| | ||| | |||||||||||||| | ||||||||||||| |
|
|
| T |
28385321 |
aaacaacttatagcatatata-aaagaatttaacgttattttgtcttttgttataaaa |
28385265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38750369 - 38750328
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttt |
42 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||| ||||||| |
|
|
| T |
38750369 |
aaacaacttatatcatatacaaaaacattttaacattatttt |
38750328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 12497296 - 12497372
Alignment:
| Q |
7 |
cttatagcatatacacaaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataa |
82 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||| ||||| ||| ||||| |||| ||||| |||||||||| |
|
|
| T |
12497296 |
cttatagcatatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa |
12497372 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 207670 - 207731
Alignment:
| Q |
31 |
taacgttattttattttttgtta-taaaatagcttttgcaaagttatacataaatgcttatc |
91 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| ||||| |||||||||| |||||||| |
|
|
| T |
207670 |
taacgttattttatcttttgttactaaaatagcttatgcaagcttatacataagtgcttatc |
207731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 24626204 - 24626166
Alignment:
| Q |
103 |
tttgtgttataagttgtaaataagttgtttatccaaaca |
141 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
24626204 |
tttgtgctataagctgtaaataagttgtttatccaaaca |
24626166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6909931 - 6909972
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttatttt |
42 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
6909931 |
aaacaacttatagcatatacaaaaacaatttaactttatttt |
6909972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28621169 - 28621226
Alignment:
| Q |
1 |
aaacaacttatagcatatacacaaacattttaacgttattttattttttgttataaaa |
58 |
Q |
| |
|
||||| ||| |||| |||||| ||||| |||||| ||||||||| ||||||||||||| |
|
|
| T |
28621169 |
aaacatcttgtagcttatacaaaaacaatttaactttattttatcttttgttataaaa |
28621226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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