View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19240_low_45 (Length: 222)

Name: NF19240_low_45
Description: NF19240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19240_low_45
NF19240_low_45
[»] chr8 (46 HSPs)
chr8 (180-222)||(758568-758610)
chr8 (180-222)||(119236-119278)
chr8 (180-222)||(9495247-9495289)
chr8 (180-222)||(12873272-12873314)
chr8 (180-222)||(23244739-23244781)
chr8 (183-222)||(7041853-7041892)
chr8 (180-222)||(3869173-3869215)
chr8 (180-222)||(8654160-8654202)
chr8 (180-222)||(18018010-18018052)
chr8 (180-222)||(18621971-18622013)
chr8 (180-222)||(31230733-31230775)
chr8 (180-222)||(35223991-35224033)
chr8 (180-222)||(39912037-39912079)
chr8 (180-222)||(40094699-40094741)
chr8 (180-221)||(8654056-8654097)
chr8 (180-221)||(16645665-16645706)
chr8 (180-221)||(24456877-24456918)
chr8 (180-221)||(31230838-31230879)
chr8 (180-221)||(36344081-36344122)
chr8 (180-221)||(39240244-39240285)
chr8 (180-221)||(40040282-40040323)
chr8 (181-221)||(37393702-37393742)
chr8 (180-219)||(5416932-5416971)
chr8 (183-222)||(6843710-6843749)
chr8 (180-219)||(23244635-23244674)
chr8 (180-219)||(26217296-26217335)
chr8 (180-218)||(410489-410527)
chr8 (180-218)||(5525989-5526027)
chr8 (180-222)||(16645769-16645811)
chr8 (180-222)||(18914380-18914422)
chr8 (184-222)||(21515424-21515462)
chr8 (180-222)||(29027196-29027238)
chr8 (180-222)||(30568500-30568542)
chr8 (180-222)||(33542504-33542546)
chr8 (180-222)||(39240150-39240192)
chr8 (182-219)||(410589-410626)
chr8 (180-221)||(5417038-5417079)
chr8 (180-221)||(11198430-11198471)
chr8 (180-221)||(14920531-14920572)
chr8 (180-221)||(26736245-26736286)
chr8 (180-221)||(33542609-33542650)
chr8 (180-220)||(6843617-6843657)
chr8 (183-219)||(11639277-11639313)
chr8 (180-220)||(19302305-19302345)
chr8 (180-220)||(29027092-29027132)
chr8 (180-212)||(35485991-35486023)
[»] chr7 (30 HSPs)
chr7 (180-222)||(26920141-26920183)
chr7 (180-222)||(2357187-2357229)
chr7 (180-222)||(5238571-5238613)
chr7 (180-222)||(9230901-9230943)
chr7 (180-222)||(10625203-10625245)
chr7 (180-222)||(21522442-21522484)
chr7 (180-221)||(35085965-35086006)
chr7 (182-222)||(32706956-32706996)
chr7 (180-222)||(18731139-18731181)
chr7 (180-222)||(31623648-31623690)
chr7 (180-222)||(35085859-35085901)
chr7 (180-222)||(38842246-38842288)
chr7 (180-222)||(47250677-47250719)
chr7 (180-221)||(11678823-11678864)
chr7 (180-221)||(23437272-23437313)
chr7 (180-221)||(31715753-31715794)
chr7 (180-221)||(43726362-43726403)
chr7 (180-221)||(47305247-47305288)
chr7 (180-222)||(34568807-34568850)
chr7 (180-222)||(473309-473351)
chr7 (183-221)||(9230799-9230837)
chr7 (183-221)||(21522341-21522379)
chr7 (180-222)||(43726466-43726508)
chr7 (180-218)||(44448140-44448178)
chr7 (180-222)||(47251018-47251059)
chr7 (180-213)||(10625317-10625350)
chr7 (180-221)||(23472713-23472754)
chr7 (180-221)||(34568703-34568744)
chr7 (180-220)||(8769508-8769548)
chr7 (180-216)||(47251127-47251163)
[»] chr3 (64 HSPs)
chr3 (180-222)||(7937787-7937829)
chr3 (180-222)||(9028415-9028457)
chr3 (180-222)||(15862399-15862441)
chr3 (180-222)||(35753655-35753697)
chr3 (180-222)||(45171188-45171230)
chr3 (180-222)||(47891737-47891779)
chr3 (180-222)||(53841250-53841292)
chr3 (180-222)||(54247382-54247424)
chr3 (180-221)||(34630102-34630143)
chr3 (181-222)||(40969376-40969417)
chr3 (179-222)||(2829527-2829570)
chr3 (183-222)||(8846199-8846238)
chr3 (180-219)||(19124309-19124348)
chr3 (180-219)||(44069350-44069389)
chr3 (180-222)||(2078696-2078738)
chr3 (180-222)||(7742989-7743031)
chr3 (180-222)||(12123210-12123252)
chr3 (180-222)||(14353272-14353314)
chr3 (180-222)||(41998043-41998085)
chr3 (184-222)||(51885488-51885526)
chr3 (180-221)||(4846821-4846862)
chr3 (180-221)||(7950395-7950436)
chr3 (180-221)||(9028311-9028352)
chr3 (180-221)||(45171292-45171333)
chr3 (180-213)||(52268337-52268370)
chr3 (181-221)||(37133398-37133438)
chr3 (182-222)||(40639239-40639279)
chr3 (182-221)||(5348793-5348832)
chr3 (183-222)||(28688214-28688253)
chr3 (180-222)||(29248439-29248479)
chr3 (182-221)||(40639342-40639381)
chr3 (180-219)||(47891633-47891672)
chr3 (182-221)||(53678658-53678697)
chr3 (180-222)||(2078603-2078645)
chr3 (180-218)||(2829636-2829674)
chr3 (184-222)||(4846719-4846757)
chr3 (180-222)||(21169786-21169828)
chr3 (180-222)||(26332542-26332584)
chr3 (180-222)||(31513983-31514025)
chr3 (184-222)||(41208525-41208563)
chr3 (180-222)||(43899298-43899340)
chr3 (180-222)||(49222251-49222293)
chr3 (180-218)||(50819340-50819378)
chr3 (180-218)||(50856486-50856524)
chr3 (181-219)||(51885591-51885629)
chr3 (183-220)||(5348702-5348739)
chr3 (180-213)||(10756838-10756871)
chr3 (180-221)||(12123304-12123345)
chr3 (180-221)||(15862302-15862343)
chr3 (183-220)||(17102507-17102544)
chr3 (180-213)||(22444306-22444339)
chr3 (180-221)||(27254104-27254145)
chr3 (180-221)||(40410832-40410873)
chr3 (180-221)||(41997939-41997980)
chr3 (180-221)||(44069243-44069284)
chr3 (180-221)||(46766743-46766784)
chr3 (180-221)||(50819442-50819483)
chr3 (180-221)||(50856381-50856422)
chr3 (180-221)||(53678553-53678594)
chr3 (180-221)||(54107789-54107830)
chr3 (183-222)||(10756931-10756971)
chr3 (180-212)||(29248542-29248574)
chr3 (181-213)||(40969487-40969519)
chr3 (180-216)||(52606348-52606384)
[»] chr1 (67 HSPs)
chr1 (180-222)||(25088240-25088282)
chr1 (180-222)||(4045323-4045365)
chr1 (180-222)||(10923587-10923629)
chr1 (180-222)||(24655706-24655748)
chr1 (180-222)||(29257047-29257089)
chr1 (180-222)||(34028841-34028883)
chr1 (180-222)||(34621741-34621783)
chr1 (180-222)||(35986352-35986394)
chr1 (180-222)||(37199145-37199187)
chr1 (182-222)||(16267837-16267877)
chr1 (180-219)||(10654256-10654295)
chr1 (183-222)||(14775959-14775998)
chr1 (180-222)||(5463342-5463384)
chr1 (180-222)||(6181840-6181882)
chr1 (183-221)||(9881674-9881712)
chr1 (180-222)||(11787965-11788007)
chr1 (180-222)||(13831246-13831288)
chr1 (180-222)||(14118650-14118692)
chr1 (180-222)||(20260603-20260645)
chr1 (180-222)||(30611340-30611382)
chr1 (180-222)||(30792664-30792706)
chr1 (180-222)||(33753345-33753387)
chr1 (180-222)||(36657621-36657663)
chr1 (180-222)||(50921180-50921222)
chr1 (180-218)||(51692099-51692137)
chr1 (180-221)||(1831889-1831930)
chr1 (180-221)||(6181736-6181777)
chr1 (180-221)||(9119517-9119558)
chr1 (180-221)||(14775865-14775906)
chr1 (180-221)||(16267915-16267956)
chr1 (180-217)||(28112870-28112907)
chr1 (180-221)||(34028946-34028987)
chr1 (180-217)||(46949876-46949913)
chr1 (180-221)||(46949961-46950002)
chr1 (180-221)||(49291113-49291154)
chr1 (180-221)||(50574742-50574783)
chr1 (180-221)||(52412823-52412864)
chr1 (180-220)||(30611446-30611486)
chr1 (180-216)||(42607642-42607678)
chr1 (180-219)||(13944631-13944670)
chr1 (180-219)||(21036105-21036144)
chr1 (180-222)||(3569497-3569539)
chr1 (180-222)||(11787860-11787902)
chr1 (180-218)||(19986350-19986388)
chr1 (180-222)||(21385056-21385098)
chr1 (180-222)||(23281234-23281276)
chr1 (180-222)||(24590449-24590491)
chr1 (180-222)||(32564174-32564216)
chr1 (188-222)||(36884843-36884877)
chr1 (180-222)||(40534045-40534087)
chr1 (180-222)||(49291207-49291249)
chr1 (180-221)||(5118171-5118212)
chr1 (184-221)||(10923487-10923524)
chr1 (180-221)||(13944736-13944777)
chr1 (180-221)||(18793917-18793958)
chr1 (180-221)||(25088136-25088177)
chr1 (180-221)||(30293133-30293174)
chr1 (180-213)||(30792560-30792593)
chr1 (180-213)||(33753449-33753482)
chr1 (180-221)||(34279360-34279401)
chr1 (180-213)||(34621868-34621901)
chr1 (180-213)||(37199052-37199085)
chr1 (180-221)||(40534150-40534191)
chr1 (180-221)||(50921285-50921326)
chr1 (180-220)||(24590346-24590386)
chr1 (180-220)||(24655812-24655852)
chr1 (180-220)||(36657727-36657767)
[»] chr5 (36 HSPs)
chr5 (180-219)||(17861158-17861197)
chr5 (180-222)||(334416-334458)
chr5 (180-222)||(3878601-3878643)
chr5 (180-222)||(10656318-10656360)
chr5 (180-222)||(19205063-19205105)
chr5 (180-222)||(25923238-25923280)
chr5 (180-222)||(31656582-31656624)
chr5 (179-219)||(5088034-5088074)
chr5 (180-219)||(25923346-25923385)
chr5 (180-222)||(14143628-14143670)
chr5 (180-222)||(38416358-38416400)
chr5 (180-222)||(40774561-40774603)
chr5 (180-221)||(5087927-5087968)
chr5 (180-221)||(7210576-7210617)
chr5 (180-221)||(7210670-7210711)
chr5 (180-221)||(16353274-16353315)
chr5 (180-221)||(31909050-31909091)
chr5 (180-221)||(36752022-36752063)
chr5 (182-221)||(5152840-5152879)
chr5 (180-219)||(10656214-10656253)
chr5 (180-219)||(16353381-16353420)
chr5 (182-221)||(17861263-17861302)
chr5 (180-219)||(41372385-41372424)
chr5 (180-219)||(43569998-43570037)
chr5 (180-222)||(5152736-5152778)
chr5 (180-222)||(5624499-5624541)
chr5 (180-222)||(12593576-12593618)
chr5 (180-222)||(12593680-12593722)
chr5 (180-222)||(40589777-40589819)
chr5 (180-222)||(41859901-41859943)
chr5 (180-222)||(43569890-43569932)
chr5 (180-213)||(12694919-12694952)
chr5 (180-221)||(35263719-35263760)
chr5 (180-221)||(39706171-39706212)
chr5 (183-219)||(7399200-7399236)
chr5 (182-222)||(36752126-36752166)
[»] scaffold0128 (1 HSPs)
scaffold0128 (180-222)||(45060-45102)
[»] chr6 (34 HSPs)
chr6 (180-222)||(31029748-31029790)
chr6 (180-219)||(14337022-14337061)
chr6 (180-222)||(1158815-1158857)
chr6 (180-222)||(7537829-7537871)
chr6 (180-222)||(12903341-12903383)
chr6 (180-222)||(13156063-13156105)
chr6 (180-222)||(13160919-13160961)
chr6 (180-222)||(24605098-24605140)
chr6 (180-222)||(29999533-29999575)
chr6 (180-222)||(33544942-33544984)
chr6 (180-222)||(35132721-35132763)
chr6 (180-221)||(1860711-1860752)
chr6 (180-217)||(3289139-3289176)
chr6 (180-221)||(24604994-24605035)
chr6 (180-221)||(29010074-29010115)
chr6 (180-220)||(2315699-2315739)
chr6 (180-216)||(2949411-2949447)
chr6 (180-219)||(6220283-6220322)
chr6 (180-219)||(9174021-9174060)
chr6 (180-219)||(25551563-25551602)
chr6 (180-219)||(31029644-31029683)
chr6 (180-219)||(33329326-33329365)
chr6 (180-219)||(33545049-33545088)
chr6 (180-219)||(35132828-35132867)
chr6 (180-218)||(3338597-3338635)
chr6 (180-222)||(6220176-6220218)
chr6 (180-222)||(24548361-24548403)
chr6 (180-222)||(31754324-31754366)
chr6 (180-222)||(33329430-33329472)
chr6 (180-221)||(2949516-2949557)
chr6 (180-221)||(3289050-3289091)
chr6 (180-221)||(11524991-11525032)
chr6 (180-221)||(33972431-33972472)
chr6 (180-220)||(17544679-17544719)
[»] chr4 (48 HSPs)
chr4 (180-222)||(25218204-25218246)
chr4 (180-222)||(43316999-43317041)
chr4 (180-222)||(45911699-45911741)
chr4 (180-221)||(4966093-4966134)
chr4 (180-221)||(54191708-54191749)
chr4 (180-219)||(32384773-32384812)
chr4 (180-219)||(40067468-40067507)
chr4 (183-222)||(44710526-44710565)
chr4 (180-222)||(1205601-1205643)
chr4 (180-222)||(8246887-8246929)
chr4 (180-222)||(29864296-29864338)
chr4 (180-222)||(29970416-29970458)
chr4 (180-222)||(33626088-33626130)
chr4 (180-222)||(45683237-45683279)
chr4 (180-221)||(27347717-27347758)
chr4 (180-221)||(40067573-40067614)
chr4 (180-221)||(44428691-44428732)
chr4 (180-216)||(21051577-21051613)
chr4 (180-220)||(27347823-27347863)
chr4 (183-222)||(1157329-1157368)
chr4 (180-219)||(1157433-1157472)
chr4 (180-219)||(45683344-45683383)
chr4 (184-222)||(4793723-4793761)
chr4 (180-222)||(8751407-8751449)
chr4 (180-222)||(9010625-9010667)
chr4 (180-222)||(12381278-12381320)
chr4 (183-221)||(33625987-33626025)
chr4 (180-222)||(43969751-43969793)
chr4 (180-222)||(46621151-46621193)
chr4 (183-221)||(52915075-52915113)
chr4 (180-222)||(53645571-53645613)
chr4 (180-222)||(54136211-54136253)
chr4 (180-217)||(9657876-9657913)
chr4 (183-216)||(11242699-11242732)
chr4 (180-221)||(21217967-21218008)
chr4 (180-221)||(22831022-22831063)
chr4 (180-221)||(24504165-24504206)
chr4 (180-221)||(25058953-25058994)
chr4 (180-221)||(25218309-25218350)
chr4 (180-221)||(25593316-25593357)
chr4 (180-221)||(33882174-33882215)
chr4 (180-221)||(46200710-46200751)
chr4 (180-213)||(46535642-46535675)
chr4 (183-219)||(8246973-8247009)
chr4 (183-215)||(10014587-10014619)
chr4 (183-215)||(10021728-10021760)
chr4 (180-220)||(22830917-22830957)
chr4 (180-216)||(42779640-42779676)
[»] chr2 (51 HSPs)
chr2 (180-222)||(16260990-16261032)
chr2 (180-222)||(31450890-31450932)
chr2 (180-222)||(39149964-39150006)
chr2 (180-222)||(44915859-44915901)
chr2 (178-222)||(16655830-16655874)
chr2 (183-222)||(27246207-27246246)
chr2 (183-222)||(28203084-28203123)
chr2 (180-219)||(34820399-34820438)
chr2 (180-219)||(41377581-41377620)
chr2 (180-222)||(13354297-13354339)
chr2 (180-222)||(25642388-25642430)
chr2 (180-222)||(27132734-27132776)
chr2 (180-222)||(27883588-27883630)
chr2 (180-222)||(32933711-32933753)
chr2 (180-222)||(33819516-33819558)
chr2 (180-222)||(34127789-34127831)
chr2 (180-222)||(36211470-36211512)
chr2 (180-222)||(38275679-38275721)
chr2 (180-222)||(39454666-39454708)
chr2 (180-221)||(15137029-15137070)
chr2 (180-221)||(16655726-16655767)
chr2 (180-221)||(17856319-17856360)
chr2 (180-221)||(28202980-28203021)
chr2 (180-221)||(28631394-28631435)
chr2 (180-221)||(31450786-31450827)
chr2 (180-221)||(37744613-37744654)
chr2 (180-221)||(40694400-40694441)
chr2 (180-221)||(41377474-41377515)
chr2 (180-221)||(41659865-41659906)
chr2 (180-221)||(44612708-44612749)
chr2 (180-220)||(15829840-15829880)
chr2 (180-219)||(13354404-13354443)
chr2 (180-219)||(20908631-20908670)
chr2 (180-219)||(20908738-20908777)
chr2 (180-219)||(25642495-25642534)
chr2 (183-222)||(27914117-27914156)
chr2 (180-219)||(36442361-36442400)
chr2 (180-222)||(5961789-5961831)
chr2 (180-222)||(12304009-12304051)
chr2 (180-222)||(12304378-12304420)
chr2 (180-222)||(21470519-21470561)
chr2 (180-222)||(28631498-28631540)
chr2 (183-217)||(40694318-40694352)
chr2 (180-221)||(16261095-16261136)
chr2 (180-221)||(27246103-27246144)
chr2 (180-221)||(27883682-27883723)
chr2 (180-221)||(33819621-33819662)
chr2 (180-221)||(37412713-37412754)
chr2 (180-221)||(44915964-44916005)
chr2 (182-222)||(16350199-16350239)
chr2 (180-220)||(43183703-43183743)
[»] scaffold0051 (2 HSPs)
scaffold0051 (180-221)||(40472-40513)
scaffold0051 (180-222)||(40576-40618)
[»] scaffold0012 (1 HSPs)
scaffold0012 (180-221)||(177290-177331)
[»] scaffold0236 (2 HSPs)
scaffold0236 (180-222)||(11438-11480)
scaffold0236 (180-221)||(11333-11374)
[»] scaffold0188 (1 HSPs)
scaffold0188 (180-222)||(13661-13703)
[»] scaffold0809 (2 HSPs)
scaffold0809 (180-217)||(4458-4495)
scaffold0809 (180-221)||(4543-4584)
[»] scaffold0444 (1 HSPs)
scaffold0444 (180-221)||(11788-11829)
[»] scaffold0045 (4 HSPs)
scaffold0045 (180-222)||(65859-65901)
scaffold0045 (180-222)||(73191-73233)
scaffold0045 (180-221)||(65964-66005)
scaffold0045 (180-221)||(73296-73337)
[»] scaffold0022 (1 HSPs)
scaffold0022 (180-222)||(93310-93352)
[»] scaffold0193 (1 HSPs)
scaffold0193 (180-221)||(26056-26097)
[»] scaffold1436 (1 HSPs)
scaffold1436 (183-215)||(1706-1738)


Alignment Details
Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 758610 - 758568
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  758610 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 758568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 119236 - 119278
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  119236 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 119278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 9495289 - 9495247
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9495289 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 9495247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12873314 - 12873272
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  12873314 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 12873272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 23244781 - 23244739
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  23244781 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 23244739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 7041892 - 7041853
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  7041892 ttttaattcaaaaacgttaggttttcttcatcttcttctc 7041853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 3869215 - 3869173
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  3869215 tagttttaattcaaaaacgttagattttcttcatcttcttctc 3869173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 8654202 - 8654160
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  8654202 tagttttaattcaaaaacgttatgttttcttcatctttttctc 8654160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 18018052 - 18018010
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  18018052 tagttttaatttaaaaacgttaggttttcttcatcttcttctc 18018010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 18622013 - 18621971
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  18622013 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 18621971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 31230733 - 31230775
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  31230733 tagttttaattcaaaaacgttatattttcttcatcttcttctc 31230775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 35224033 - 35223991
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  35224033 tagttttaattcaaaaacgttagtttttcttcatcttcttctc 35223991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 39912037 - 39912079
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  39912037 tagttttaattcaaaaacgttagattttcttcatcttcttctc 39912079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 40094741 - 40094699
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  40094741 tagttttaattcaaaaacgttaaattttcctcatcttcttctc 40094699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 8654056 - 8654097
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  8654056 tagttttaattcaaaaacgttaggttttcttcattttcttct 8654097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 16645665 - 16645706
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16645665 tagttttaattcaaaaacgttaggttttcttcattttcttct 16645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 24456918 - 24456877
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  24456918 tagttttaattcaaaaacgttaggttttcttcattttcttct 24456877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 31230879 - 31230838
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  31230879 tagttttaattcaaaaacgttaggttttcttcattttcttct 31230838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 36344081 - 36344122
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  36344081 tagttttaattcaaaaacgttagattttcttcatcttcttct 36344122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 39240285 - 39240244
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  39240285 tagttttaattcaaaaacgttatgttttcttcattttcttct 39240244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 40040282 - 40040323
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  40040282 tagttttaattcaaaaacgttaggttttcttcattttcttct 40040323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 37393742 - 37393702
Alignment:
Q  181 agttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  37393742 agttttaattcaaaaacgttaggttttcttcattttcttct 37393702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 5416932 - 5416971
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  5416932 tagttttaattcaaaaacgttagattttcttcatcttctt 5416971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 6843749 - 6843710
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  6843749 ttttaattcaaaaacattaggttttcttcatcttcttctc 6843710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 23244635 - 23244674
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  23244635 tagttttaattcaaaaacgttaggttttcttcattttctt 23244674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 26217335 - 26217296
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  26217335 tagttttaattcaaaaacgttcggttttcttcatcttctt 26217296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 410489 - 410527
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  410489 tagttttaattcaaaaatgttaggttttcttcatcttct 410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 5525989 - 5526027
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  5525989 tagttttaattcaaaaacgttaggttttcttcattttct 5526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 16645811 - 16645769
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  16645811 tagttttaattcaaaaagattaggttttcttcatcttcttctc 16645769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 18914380 - 18914422
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||    
T  18914380 tagttttaattcaaaaatgttaggtttttttcatcttcttctc 18914422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21515462 - 21515424
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  21515462 tttaattcaaaaacgttacgttgtcttcatcttcttctc 21515424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 29027238 - 29027196
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  29027238 tagttttaattcaaaaacgttagattttcgtcatcttcttctc 29027196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 30568542 - 30568500
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| |||||||||| |||||||||    
T  30568542 tagttttaattcaaaaacattaggttttcttcaccttcttctc 30568500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 33542504 - 33542546
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||| ||||||||    
T  33542504 tagttttaattcaaaaacgttagattttcttcattttcttctc 33542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 39240150 - 39240192
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  39240150 tagttttaattcaaaaatgttaggttttcttcatcttattctc 39240192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 410626 - 410589
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  410626 gttttaattcaaaaacgttaggttttcttcattttctt 410589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 5417079 - 5417038
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||| ||||||||||||| ||||||||||| |||||||    
T  5417079 tagttttatttcaaaaacgttaggttttcttcattttcttct 5417038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 11198471 - 11198430
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  11198471 tagttttaattaaaaaacgttaggttttcttcattttcttct 11198430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 14920531 - 14920572
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  14920531 tagttttaattcaaaaacgttagattttcttcatcctcttct 14920572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 26736245 - 26736286
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  26736245 tagttttaattcaaaaacgttaggctttcttcattttcttct 26736286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33542650 - 33542609
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  33542650 tagttttaattcaaaaatgttaggttttcttcattttcttct 33542609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 6843617 - 6843657
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  6843617 tagttttaattaaaaaacgttaggttttcttcattttcttc 6843657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 11639313 - 11639277
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||  ||||||||||||||||    
T  11639313 ttttaattcaaaaacgttagattttcttcatcttctt 11639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 19302305 - 19302345
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||||||  | ||||||||||||||||    
T  19302305 tagttttaattcaaaaacgtttgggtttcttcatcttcttc 19302345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 29027092 - 29027132
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  29027092 tagttttaattctaaaacgttaggttttcttcattttcttc 29027132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 35485991 - 35486023
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttca 212  Q
    |||||||||||||||||||||| ||||||||||    
T  35485991 tagttttaattcaaaaacgttaggttttcttca 35486023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 26920183 - 26920141
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26920183 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 26920141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 2357187 - 2357229
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  2357187 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 2357229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5238571 - 5238613
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  5238571 tagttttacttcaaaaacgttaagttttcttcatcttcttctc 5238613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 9230943 - 9230901
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9230943 tagttttaattcaaaaacgttatgttttcttcatcttcttctc 9230901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 10625203 - 10625245
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  10625203 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 10625245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 21522484 - 21522442
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21522484 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 21522442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 35086006 - 35085965
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  35086006 tagttttaattcaaaaacgttaagttttcttcattttcttct 35085965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 32706996 - 32706956
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  32706996 gttttaattcaaaaacgttaggttttcttcatcttcttctc 32706956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 18731139 - 18731181
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  18731139 tagttttaattcaaaaacgttagattttcttcatcttcttctc 18731181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 31623690 - 31623648
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  31623690 tagttttaattcaaaaacgttaggttttcttcattttcttctc 31623648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 35085859 - 35085901
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  35085859 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 35085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 38842288 - 38842246
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  38842288 tagttttaattcaaaaacgttagattttcttcatcttcttctc 38842246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 47250677 - 47250719
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  47250677 tagttttaattcaaaaacgttagattttcttcatcttcttctc 47250719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 11678823 - 11678864
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  11678823 tagttttaattcaaaaacgttaggttttcttcattttcttct 11678864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 23437272 - 23437313
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  23437272 tagttttaattcaaaaacgttaggttttcttcattttcttct 23437313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31715753 - 31715794
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  31715753 tagttttaattcaaaaacgttaggttttcttcattttcttct 31715794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 43726362 - 43726403
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  43726362 tagttttaattcaaaaatgttaagttttcttcattttcttct 43726403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 47305247 - 47305288
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  47305247 tagttttaattcaaagacgttaggttttcttcatcttcttct 47305288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 34568850 - 34568807
Alignment:
Q  180 tagttttaattcaaaaacgttaag-ttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  34568850 tagttttaattcaaaaacgttaggtttttcttcatcttcttctc 34568807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 473309 - 473351
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  473309 tagttttaagtcaaaaacgttagattttcttcatcttcttctc 473351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 9230799 - 9230837
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  9230799 ttttaattcaaaaacgttaggttttcttcattttcttct 9230837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 21522341 - 21522379
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  21522341 ttttaattcaaaaacgttaggttttcttcattttcttct 21522379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 43726508 - 43726466
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||   ||||||||||||||||||    
T  43726508 tagttttaattcaaaaacgttagagtttcttcatcttcttctc 43726466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 44448178 - 44448140
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  44448178 tagttttaattcaaaaatgttaggttttcttcatcttct 44448140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 47251018 - 47251059
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  47251018 tagttttaat-caaaaacgttaaattttcttcatcttcttctc 47251059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 10625350 - 10625317
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  10625350 tagttttaattcaaaaacgttacgttttcttcat 10625317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 23472713 - 23472754
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  23472713 tagttttaattcaaaaacgttagattttcttcattttcttct 23472754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 34568703 - 34568744
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  34568703 tagttttaattcaaaaatgttaggttttcttcattttcttct 34568744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 8769548 - 8769508
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  8769548 tagttttaattcaaaaacgttatattttcttcattttcttc 8769508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 47251163 - 47251127
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  47251163 tagttttaattcaaaaacgttatgttttcttcttctt 47251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 7937829 - 7937787
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7937829 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 7937787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 9028457 - 9028415
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9028457 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 9028415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 15862441 - 15862399
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  15862441 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 15862399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 35753697 - 35753655
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  35753697 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 35753655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 45171188 - 45171230
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  45171188 tagttttaattcaaaaacgttatgttttcttcatcttcttctc 45171230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 47891779 - 47891737
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47891779 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 47891737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 53841292 - 53841250
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  53841292 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 53841250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 54247382 - 54247424
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  54247382 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 54247424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 34630102 - 34630143
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  34630102 tagttttaattcaaaaacgttaagttttcttcattttcttct 34630143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 40969376 - 40969417
Alignment:
Q  181 agttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  40969376 agttttaattcaaaaacgttaggttttcttcatcttcttctc 40969417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 2829527 - 2829570
Alignment:
Q  179 ctagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  2829527 ctagttttaattcaaaaacattaggttttcttcatcttcttctc 2829570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 8846199 - 8846238
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8846199 ttttaattcaaaaacgttaggttttcttcatcttcttctc 8846238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 19124309 - 19124348
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  19124309 tagttttaattcaaaaacgttaggttttcttcatcttctt 19124348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 44069389 - 44069350
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  44069389 tagttttaattcaaaaacgttaggttttcttcatcttctt 44069350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 2078738 - 2078696
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  2078738 tagttttaattcaaacacgttaaattttcttcatcttcttctc 2078696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 7743031 - 7742989
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  7743031 tagttttaattcaaaaacgttagattttcttcatcttcttctc 7742989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 12123210 - 12123252
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  12123210 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 12123252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 14353314 - 14353272
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  14353314 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 14353272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 41998085 - 41998043
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  41998085 tagttttaattcaaaaacgttaggttttcttcgtcttcttctc 41998043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 51885488 - 51885526
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  51885488 tttaattcaaaaacgttaggttttcttcatcttcttctc 51885526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 4846862 - 4846821
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  4846862 tagttttaattcaaaaacgttaggttttcttcattttcttct 4846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 7950395 - 7950436
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  7950395 tagttttaattcaaaaacgttaggttttcttcattttcttct 7950436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 9028311 - 9028352
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  9028311 tagttttaattcaaaaacgttaggttttcttcattttcttct 9028352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 45171333 - 45171292
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  45171333 tagttttaattcaaaaacgttaggttttcttcattttcttct 45171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 52268370 - 52268337
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    ||||||||||||||||||||||||||||||||||    
T  52268370 tagttttaattcaaaaacgttaagttttcttcat 52268337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 37133398 - 37133438
Alignment:
Q  181 agttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  37133398 agttttaattcaaaaacgttaggttttcttcattttcttct 37133438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 40639239 - 40639279
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  40639239 gttttaattcaaaaacgttagattttcttcatcttcttctc 40639279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 5348832 - 5348793
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  5348832 gttttaattcaaaaacgttaggttttcttcatattcttct 5348793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 28688253 - 28688214
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  28688253 ttttaattcaaaaacgttagattttcttcatcttcttctc 28688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 29248439 - 29248479
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  29248439 tagttttaattcaaaaacgtta--ttttcttcatcttcttctc 29248479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 40639381 - 40639342
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  40639381 gttttaattcaaaaacgttaggttttcttcattttcttct 40639342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 47891633 - 47891672
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  47891633 tagttttaattcaaaaacgttaggttttcttcattttctt 47891672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 53678697 - 53678658
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  53678697 gttttagttcaaaaacgttaggttttcttcatcttcttct 53678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 2078603 - 2078645
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||    
T  2078603 tagttttgattcaaaaacgttaggttttcttcattttcttctc 2078645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 2829674 - 2829636
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  2829674 tagttttaattcaaaaacgttaggttttcttcattttct 2829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 4846719 - 4846757
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  4846719 tttaattcaaaaacgttgaattttcttcatcttcttctc 4846757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 21169786 - 21169828
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||| |||| ||||    
T  21169786 tagttttaattcaaaaacgttaggttttcttcaccttcgtctc 21169828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 26332584 - 26332542
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| |||||| |||||||||||||    
T  26332584 tagttttaattcaaaaacattaggttttcatcatcttcttctc 26332542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 31513983 - 31514025
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  31513983 tagttttaattcaaaaatgttaggttttcttcatctttttctc 31514025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 41208525 - 41208563
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  41208525 tttaattcaaaaacgttaggttttcttcattttcttctc 41208563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 43899340 - 43899298
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  43899340 tagttttaattaaacaacgttaggttttcttcatcttcttctc 43899298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 49222293 - 49222251
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    
T  49222293 tagttttaattcaaaaacgttagattttcttcgtcttcttctc 49222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 50819340 - 50819378
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  50819340 tagttttaattcaaaaatgttaagttttcttcattttct 50819378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 50856524 - 50856486
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  50856524 tagttttaattcaaaaatgttaagttttcttcattttct 50856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 51885629 - 51885591
Alignment:
Q  181 agttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  51885629 agttttaattcaaaaacgttaggttttcttcattttctt 51885591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 5348702 - 5348739
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||||  |||||||||||||||||    
T  5348702 ttttaattcaaaaacgttagattttcttcatcttcttc 5348739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 10756838 - 10756871
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  10756838 tagttttaattcaaaaacgttaggttttcttcat 10756871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 12123345 - 12123304
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  12123345 tagttttaattcaaaagcgttaggttttcttcattttcttct 12123304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 15862302 - 15862343
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  15862302 tagttttaattcaaaaacattaggttttcttcattttcttct 15862343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 17102507 - 17102544
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  17102507 ttttaattcaaaaacgttaggttttcttcatattcttc 17102544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 22444306 - 22444339
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  22444306 tagttttaattcaaaaacgttaggttttcttcat 22444339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 27254104 - 27254145
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  27254104 tagttttaattcaaaaatgttaggttttcttcattttcttct 27254145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 40410832 - 40410873
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  40410832 tagttttaattaaaaaacgttaggttttcttcattttcttct 40410873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41997939 - 41997980
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||| |||||| |||||||    
T  41997939 tagttttaattcaaaaacgttaggtttacttcattttcttct 41997980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 44069243 - 44069284
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  44069243 tagttttaattcaaaaacattaggttttcttcattttcttct 44069284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 46766743 - 46766784
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  46766743 tagttttaattaaaaaacgttaggttttcttcattttcttct 46766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 50819483 - 50819442
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  50819483 tagttttaattcaaaaacgttagattttcttcattttcttct 50819442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 50856381 - 50856422
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  50856381 tagttttaattcaaaaacgttagattttcttcattttcttct 50856422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 53678553 - 53678594
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  53678553 tagttttaattcaaaaatgttaggttttcttcattttcttct 53678594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 54107789 - 54107830
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  54107789 tagttttaattcaaaaacattaggttttcttcattttcttct 54107830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 10756971 - 10756931
Alignment:
Q  183 ttttaattcaaaaacgtta-agttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  10756971 ttttaattcaaaaacgttagatttttcttcatcttcttctc 10756931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 29248574 - 29248542
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttca 212  Q
    |||||||||||||||||||||| ||||||||||    
T  29248574 tagttttaattcaaaaacgttaggttttcttca 29248542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 40969519 - 40969487
Alignment:
Q  181 agttttaattcaaaaacgttaagttttcttcat 213  Q
    ||||||||||||||||||||| |||||||||||    
T  40969519 agttttaattcaaaaacgttaggttttcttcat 40969487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 52606384 - 52606348
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    ||||||||||||||||||||||  |||||||||||||    
T  52606384 tagttttaattcaaaaacgttagattttcttcatctt 52606348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 25088282 - 25088240
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25088282 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 25088240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 4045365 - 4045323
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  4045365 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 4045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 10923629 - 10923587
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  10923629 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 10923587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 24655706 - 24655748
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24655706 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 24655748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 29257089 - 29257047
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  29257089 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 29257047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 34028841 - 34028883
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34028841 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 34028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 34621741 - 34621783
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34621741 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 34621783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 35986352 - 35986394
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  35986352 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 35986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 37199187 - 37199145
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  37199187 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 37199145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16267837 - 16267877
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  16267837 gttttaattcaaaaacgttaggttttcttcatcttcttctc 16267877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 10654295 - 10654256
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  10654295 tagttttaattcaaaaacgttaggttttcttcatcttctt 10654256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 14775998 - 14775959
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  14775998 ttttaattcaaaaacgttaggttttcttcatcttcttctc 14775959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 5463384 - 5463342
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  5463384 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 5463342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 6181882 - 6181840
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  6181882 tagttttaattcaaaaacgtaaggttttcttcatcttcttctc 6181840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 9881674 - 9881712
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9881674 ttttaattcaaaaacgttaggttttcttcatcttcttct 9881712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 11788007 - 11787965
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  11788007 tagttttaattcaaaaacgttagattttcttcatcttcttctc 11787965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 13831288 - 13831246
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  13831288 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 13831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 14118650 - 14118692
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  14118650 tagttttaattcaaaaacgttaggttttctttatcttcttctc 14118692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 20260645 - 20260603
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  20260645 tagttttaatttaaaaacgttatgttttcttcatcttcttctc 20260603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 30611340 - 30611382
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  30611340 tagttttaattaaaaaacgttaggttttcttcatcttcttctc 30611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 30792706 - 30792664
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  30792706 tagttttaattcaaaaacgttaggtttacttcatcttcttctc 30792664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 33753345 - 33753387
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  33753345 tagttttaattcaaaaacgttagcttttcttcatcttcttctc 33753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 36657621 - 36657663
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  36657621 tagttttaattcaaaaacgttaggttttcttcattttcttctc 36657663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 50921180 - 50921222
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  50921180 tagttttaattcaaaaacgttagattttcttcatcttcttctc 50921222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 51692137 - 51692099
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  51692137 tagttttaattcaaaaacgttaggttttcttcatcttct 51692099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 1831930 - 1831889
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  1831930 tagttttaattcaaaaacgttaggttttcttcattttcttct 1831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 6181736 - 6181777
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  6181736 tagttttaattcaaaaacgttaggttttcttcattttcttct 6181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 9119558 - 9119517
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  9119558 tagttttaattcaaaaacgttaggttttcttcattttcttct 9119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 14775865 - 14775906
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  14775865 tagttttaattcaaaaacgttaggttttcttcattttcttct 14775906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 16267956 - 16267915
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16267956 tagttttaattcaaaaacgttaggttttcttcattttcttct 16267915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 28112870 - 28112907
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28112870 tagttttaattcaaaaacgttaggttttcttcatcttc 28112907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 34028987 - 34028946
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  34028987 tagttttaattcaaaaacgttaggttttcttcattttcttct 34028946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 46949876 - 46949913
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46949876 tagttttaattcaaaaacgtcaagttttcttcatcttc 46949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 46950002 - 46949961
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  46950002 tagttttaattcaaaaacgttaggttttcttcattttcttct 46949961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 49291113 - 49291154
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  49291113 tagttttaattcaaaaacgttaggttttcttcattttcttct 49291154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 50574783 - 50574742
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  50574783 tagttttaattaaaaaacgttaggttttcttcatcttcttct 50574742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 52412864 - 52412823
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  52412864 tagttttaattcaaaaacgttagattttcttcatcttcttct 52412823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 30611486 - 30611446
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  30611486 tagttttaattcaaaaacgttaggttttcttcattttcttc 30611446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 42607642 - 42607678
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42607642 tagttttaattcaaaaacgttaggttttcttcatctt 42607678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 13944631 - 13944670
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  13944631 tagttttaattcaaaaatgttaggttttcttcatcttctt 13944670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 21036105 - 21036144
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  21036105 tagttttaattaaaaaacgttaggttttcttcatcttctt 21036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 3569497 - 3569539
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| | ||||| ||||||||||||    
T  3569497 tagttttaattcaaaaacgttaggatttctccatcttcttctc 3569539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 11787860 - 11787902
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||| ||||||||    
T  11787860 tagttttaattcaaaaacgttagattttcttcattttcttctc 11787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 19986388 - 19986350
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  19986388 tagttttaattcaaaaatgttaggttttcttcatcttct 19986350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 21385056 - 21385098
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  21385056 tagttttaattcaaaaacgatagattttcttcatcttcttctc 21385098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 23281276 - 23281234
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||| ||||||||||||||    
T  23281276 tagttttaattcaaaaacgttagatttttttcatcttcttctc 23281234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 24590491 - 24590449
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  ||||||||| |||||||||    
T  24590491 tagttttaattcaaaaacgttagattttcttcaccttcttctc 24590449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 32564216 - 32564174
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  32564216 tagttttaattcaaaaatattaggttttcttcatcttcttctc 32564174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 36884843 - 36884877
Alignment:
Q  188 attcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||| ||||||||||||||||||||    
T  36884843 attcaaaaacgttaggttttcttcatcttcttctc 36884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 40534045 - 40534087
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| |||||||| |||||||||||    
T  40534045 tagttttaatttaaaaacgttaggttttctttatcttcttctc 40534087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 49291249 - 49291207
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||| ||||||||||||||  |||||||||||||||||||    
T  49291249 tagttttgattcaaaaacgttagattttcttcatcttcttctc 49291207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5118171 - 5118212
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  5118171 tagttttaattcaaaaacattaggttttcttcattttcttct 5118212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 10923487 - 10923524
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  10923487 tttaattcaaaaacgttatgttttcttcattttcttct 10923524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 13944777 - 13944736
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||| ||||| |||||||    
T  13944777 tagttttaattcaaaaacgttaggttttattcattttcttct 13944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 18793958 - 18793917
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  18793958 tagttttaattcaaaagcgttaggttttcttcattttcttct 18793917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 25088136 - 25088177
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  25088136 tagttttaattcaaaaacattaggttttcttcattttcttct 25088177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 30293133 - 30293174
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||||| ||||| ||||    
T  30293133 tagttttaattcaaaaacgttaggttttctttatcttattct 30293174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 30792560 - 30792593
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||| |||||||||||||    
T  30792560 tagttttaattcaaaaacgtcaagttttcttcat 30792593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 33753482 - 33753449
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  33753482 tagttttaattcaaaaacgttaggttttcttcat 33753449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 34279360 - 34279401
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  34279360 tagttttaattcaaaagcgttaggttttcttcattttcttct 34279401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 34621901 - 34621868
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    ||||||||||||||||||||||| ||||||||||    
T  34621901 tagttttaattcaaaaacgttaaattttcttcat 34621868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 37199052 - 37199085
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  37199052 tagttttaattcaaaaacgttaggttttcttcat 37199085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 40534191 - 40534150
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| ||||| |||||||||||||||| |||||||    
T  40534191 tagttttaattaaaaaatgttaagttttcttcatgttcttct 40534150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 50921326 - 50921285
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||| ||||| |||||||    
T  50921326 tagttttaattcaaaaacgttaggttttattcattttcttct 50921285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 24590346 - 24590386
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  24590346 tagttttaattcaaaaacgttagattttcttcattttcttc 24590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 24655852 - 24655812
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||||||| |||||||| || ||||||    
T  24655852 tagttttaattcaaaaacgttaggttttcttaattttcttc 24655812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 36657767 - 36657727
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  36657767 tagttttaattcaaaaacgttagattttcttcattttcttc 36657727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 17861158 - 17861197
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17861158 tagttttaattcaaaaacgttaagttttcttcatcttctt 17861197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 334416 - 334458
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  334416 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 334458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 3878601 - 3878643
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  3878601 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 3878643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 10656360 - 10656318
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  10656360 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 10656318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 19205063 - 19205105
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  19205063 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 19205105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 25923238 - 25923280
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25923238 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 25923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 31656624 - 31656582
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31656624 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 31656582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 5088074 - 5088034
Alignment:
Q  179 ctagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  5088074 ctagttttaattcaaaaacgttaggttttcttcatcttctt 5088034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 25923385 - 25923346
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  25923385 tagttttaattcaaaaacgttaagttttcttcattttctt 25923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 14143628 - 14143670
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  14143628 tagttttaattcaaaaacattaggttttcttcatcttcttctc 14143670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 38416400 - 38416358
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  38416400 tagttttaattcaaaaacgttaggttttcttcatcttgttctc 38416358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 40774603 - 40774561
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  40774603 tagttttaattcaaaaacgttaggttttctccatcttcttctc 40774561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 5087927 - 5087968
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  5087927 tagttttaattcaaaaacgttaggttttcttcattttcttct 5087968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 7210576 - 7210617
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  7210576 tagttttaattcaaaaacgttaggttttcatcatcttcttct 7210617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 7210711 - 7210670
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  7210711 tagttttaattcaaaaacgttaggttttcttcattttcttct 7210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 16353274 - 16353315
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16353274 tagttttaattcaaaaacgttaggttttcttcattttcttct 16353315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31909050 - 31909091
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  31909050 tagtttcaattcaaaaacgttaggttttcttcatcttcttct 31909091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 36752022 - 36752063
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  36752022 tagttttaattcaaaaacgttaggttttcttcattttcttct 36752063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 5152879 - 5152840
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  5152879 gttttaattcaaaaacgttaggttttcttcattttcttct 5152840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 10656214 - 10656253
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  10656214 tagttttaattcaaaaacgttaggttttcttcattttctt 10656253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 16353420 - 16353381
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  16353420 tagttttaattaaaaaacgttaggttttcttcatcttctt 16353381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 17861302 - 17861263
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  17861302 gttttaattcaaaaacgttaggttttcttcattttcttct 17861263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 41372424 - 41372385
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  41372424 tagttttaattcaaaaacgttaggttttcttcattttctt 41372385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 43570037 - 43569998
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  43570037 tagttttgattcaaaaacgttaagttttcttcattttctt 43569998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5152736 - 5152778
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| |||||||| |||||||||||    
T  5152736 tagttttaattcaaaaactttaggttttcttgatcttcttctc 5152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5624499 - 5624541
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||| |||| ||||    
T  5624499 tagttttaattcaaaaacgttaggttttcttcaccttcgtctc 5624541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 12593576 - 12593618
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  12593576 tagttttaagtcaaaaacgttagattttcttcatcttcttctc 12593618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12593722 - 12593680
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  12593722 tagttttaatttaaaaacgttaggttttcttcattttcttctc 12593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 40589777 - 40589819
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  ||||||||||| |||||||    
T  40589777 tagttttaattcaaaaacgttagattttcttcatcatcttctc 40589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 41859943 - 41859901
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  41859943 tagtattaattcaaaaaggttaggttttcttcatcttcttctc 41859901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 43569890 - 43569932
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||    
T  43569890 tagttttaatttaaaaatgttaggttttcttcatcttcttctc 43569932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 12694952 - 12694919
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  12694952 tagttttaattcaaaaacgttaggttttcttcat 12694919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 35263760 - 35263719
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||| ||| |||||||    
T  35263760 tagttttaattcaaaaacgttaggttttctccattttcttct 35263719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 39706171 - 39706212
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  39706171 tagttttaattcaaaaacgttaggttttctttattttcttct 39706212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 7399200 - 7399236
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  7399200 ttttaattcaaaaacgttaggttttcttcattttctt 7399236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 36752166 - 36752126
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||| ||||| |||| ||||||||||||||||||||    
T  36752166 gttttaatttaaaaaagttaggttttcttcatcttcttctc 36752126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 45102 - 45060
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  45102 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 45060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 31029790 - 31029748
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31029790 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 31029748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 14337022 - 14337061
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  14337022 tagttttaattcaaaaacgttaggttttcttcatcttctt 14337061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 1158857 - 1158815
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  1158857 tagttttaattcaaaaacgtttcgttttcttcatcttcttctc 1158815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 7537871 - 7537829
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  7537871 tagttttaattcaaaaacattaggttttcttcatcttcttctc 7537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 12903341 - 12903383
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  12903341 tagttttaattcaaaaacgttaggttttcttcatcatcttctc 12903383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 13156105 - 13156063
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  13156105 tagttttaattcaaaaacgttaggttttcttcatctttttctc 13156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 13160961 - 13160919
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  13160961 tagttttaattcaaaaacgttaggttttcttcatctttttctc 13160919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 24605140 - 24605098
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  24605140 tagttttaattcaaaaacattaggttttcttcatcttcttctc 24605098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 29999533 - 29999575
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  29999533 tagttttaattaaaaaacgttaggttttcttcatcttcttctc 29999575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 33544942 - 33544984
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  33544942 tagttttaattcaaaaaggttaggttttcttcatcttcttctc 33544984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 35132721 - 35132763
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  35132721 tagttttaattcaaaaacgttaggttttcttcatcttcgtctc 35132763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 1860752 - 1860711
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  1860752 tagtcttaattcaaaaacgttaagttttcttcattttcttct 1860711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 3289176 - 3289139
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    |||||||||||||||||||||| |||||||||||||||    
T  3289176 tagttttaattcaaaaacgttaggttttcttcatcttc 3289139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 24604994 - 24605035
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  24604994 tagttttaattcaaaaacgttaggttttcttcattttcttct 24605035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 29010074 - 29010115
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  29010074 tagttttaattcaaaaacgttaggttttcttcattttcttct 29010115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 2315699 - 2315739
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  2315699 tagttttaattcaaaaacgtttggttttcttcatcttcttc 2315739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 2949411 - 2949447
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2949411 tagttttaattcaaaaacgttaggttttcttcatctt 2949447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 6220322 - 6220283
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  6220322 tagttttaattcaaaaacgttaggttttcttcattttctt 6220283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 9174021 - 9174060
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  9174021 tagttttaattcaaaaacgttaggttttcatcatcttctt 9174060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 25551602 - 25551563
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  25551602 tagttttaattcaaaaacgttaggttttcttgatcttctt 25551563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 31029644 - 31029683
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  31029644 tagttttaattcaaaaacgttaggttttcttcattttctt 31029683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 33329326 - 33329365
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  33329326 tagttttaattcaaaaacgttaggttttcttcattttctt 33329365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 33545088 - 33545049
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  33545088 tagttttaattcaaaaacgttaggttttcttcattttctt 33545049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 35132867 - 35132828
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  35132867 tagttttaattcaaaaacgttaggttttcttcattttctt 35132828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 3338597 - 3338635
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttct 218  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  3338597 tagttttaattcaaaaacgttacgttttcttcattttct 3338635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 6220176 - 6220218
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||    
T  6220176 tagttttcattcaaaaacgttaaattttcctcatcttcttctc 6220218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 24548361 - 24548403
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  ||||||||||| |||||||    
T  24548361 tagttttaattcaaaaacgttagattttcttcatcctcttctc 24548403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 31754324 - 31754366
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||| || |||||    
T  31754324 tagttttaattcaaaaacgttatgttttcttcatttttttctc 31754366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 33329472 - 33329430
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||| |||||| ||||    
T  33329472 tagttttaattcaaaaacgttaggttttcttaatcttcgtctc 33329430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2949557 - 2949516
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||| ||||||| ||||||||||| |||||||    
T  2949557 tagttttaattcaacaacgttaggttttcttcattttcttct 2949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 3289050 - 3289091
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||| ||||| |||||||    
T  3289050 tagttttaattcaaaaacgttaggtttttttcattttcttct 3289091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 11525032 - 11524991
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  11525032 tagttttaattaaaaaacgttaggttttcttcattttcttct 11524991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33972472 - 33972431
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||| | |||||||||| |||||||    
T  33972472 tagttttaattcaaaaacgttgaattttcttcattttcttct 33972431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 17544719 - 17544679
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  17544719 tagttttaattcaaaaacattaggttttcttcattttcttc 17544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 25218204 - 25218246
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25218204 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 25218246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 43316999 - 43317041
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  43316999 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 43317041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 45911699 - 45911741
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  45911699 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 45911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 4966134 - 4966093
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  4966134 tagttttaattcaaaaacgttaggttttcttcatcttcttct 4966093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 54191708 - 54191749
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  54191708 tagttttaattcaaaaacgttaggttttcttcatcttcttct 54191749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 32384773 - 32384812
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  32384773 tagttttaattcaaaaacgttaggttttcttcatcttctt 32384812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 40067468 - 40067507
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  40067468 tagttttaattcaaaaacgttatgttttcttcatcttctt 40067507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 44710526 - 44710565
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  44710526 ttttaattcaaaaacgttaggttttcttcatcttcttctc 44710565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 1205643 - 1205601
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  1205643 tagttttaattcaaaaacgttatgttttctttatcttcttctc 1205601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 8246887 - 8246929
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  8246887 tagttttaattcaaaaacgttaggtttttttcatcttcttctc 8246929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 29864296 - 29864338
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  29864296 tagttttaattcaaaaaggttaggttttcttcatcttcttctc 29864338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 29970458 - 29970416
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  29970458 tagttttaattcaaaatcgttaagttttcttcatcttgttctc 29970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 33626130 - 33626088
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  33626130 tagttttaattaaaaaacgttaggttttcttcatcttcttctc 33626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 45683237 - 45683279
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  45683237 tagttttaattcaaaaacattaggttttcttcatcttcttctc 45683279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 27347717 - 27347758
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  27347717 tagttttaattcaaaaacgttaggttttcttcattttcttct 27347758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 40067614 - 40067573
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  40067614 tagttttaattcaaaaacgttaggttttcttcattttcttct 40067573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 44428691 - 44428732
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  44428691 tagttttaattcaaaaacgttaggttttcttcattttcttct 44428732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 21051613 - 21051577
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21051613 tagttttaattcaaaaacgttaggttttcttcatctt 21051577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 27347863 - 27347823
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  27347863 tagttttaattcaaaaacgttagattttcttcatcttcttc 27347823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 1157329 - 1157368
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  1157329 ttttaattcaaaaatgttaggttttcttcatcttcttctc 1157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 1157472 - 1157433
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  1157472 tagttttaattcaaaaacgttaggttttcttcattttctt 1157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 45683383 - 45683344
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  45683383 tagttttaattcaaaaacgttaggttttcttcattttctt 45683344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 4793723 - 4793761
Alignment:
Q  184 tttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  4793723 tttaattcaaaaacgttaggttttcttcatctttttctc 4793761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 8751407 - 8751449
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  8751407 tagttttaattaaaaaacgttagattttcttcatcttcttctc 8751449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 9010625 - 9010667
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||| ||| |||| |||||||||||||||    
T  9010625 tagttttaattcaaaaacattaggtttgcttcatcttcttctc 9010667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12381320 - 12381278
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||| ||||||||||||||    
T  12381320 tagttttaattcaaaaacgttagatttttttcatcttcttctc 12381278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 33625987 - 33626025
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  33625987 ttttaattcaaaaacgttaggttttcttcattttcttct 33626025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 43969793 - 43969751
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  43969793 tagttttaattcaaaaatgttaggttttctttatcttcttctc 43969751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 46621193 - 46621151
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  46621193 tagttttaattaaaaaacgttaggttttcttcattttcttctc 46621151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 52915075 - 52915113
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  52915075 ttttaattcaaaaacgttaggttttcttcattttcttct 52915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 53645571 - 53645613
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  ||||||| |||||||||||    
T  53645571 tagttttaattcaaaaacgttagattttctttatcttcttctc 53645613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 54136211 - 54136253
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||| |||||||||    
T  54136211 tagttttaattcaaaaatgttaggttttcttcaccttcttctc 54136253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 9657913 - 9657876
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  9657913 tagttttaattcaaaaacgttaggttatcttcatcttc 9657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 11242732 - 11242699
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatctt 216  Q
    ||||||||||||||||||| ||||||||||||||    
T  11242732 ttttaattcaaaaacgttaggttttcttcatctt 11242699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 21217967 - 21218008
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  21217967 tagttttaattcaaaagcgttaggttttcttcattttcttct 21218008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 22831063 - 22831022
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  22831063 tagttttaattcaaaaacgttagggtttcttcattttcttct 22831022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 24504206 - 24504165
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  24504206 tagttttaattcaaaaacgttagtttttcttcattttcttct 24504165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 25058953 - 25058994
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  25058953 tagttttaattcaaaaacgttagcttttcttcattttcttct 25058994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 25218350 - 25218309
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  25218350 tagttttaattcaaaaacgttagattttcttcattttcttct 25218309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 25593357 - 25593316
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  25593357 tagttttaatttaaaaacgttaggttttcttcattttcttct 25593316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33882215 - 33882174
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||| ||||||||||||||||| ||||||||||| |||||||    
T  33882215 tagtcttaattcaaaaacgttaggttttcttcattttcttct 33882174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 46200751 - 46200710
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  46200751 tagttttaattcaaaagcgttaggttttcttcattttcttct 46200710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 46535642 - 46535675
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcat 213  Q
    |||||||||||||||||||||| |||||||||||    
T  46535642 tagttttaattcaaaaacgttaggttttcttcat 46535675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 8247009 - 8246973
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  8247009 ttttaattcaaaaacgttaggttttcttcattttctt 8246973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 10014587 - 10014619
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatct 215  Q
    ||||||||||||||||||| |||||||||||||    
T  10014587 ttttaattcaaaaacgttaggttttcttcatct 10014619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 10021728 - 10021760
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatct 215  Q
    ||||||||||||||||||| |||||||||||||    
T  10021728 ttttaattcaaaaacgttaggttttcttcatct 10021760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 22830917 - 22830957
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  22830917 tagttttaattcaaaaatgttagggtttcttcatcttcttc 22830957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 42779640 - 42779676
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatctt 216  Q
    ||||||||||||||||||||||  |||||||||||||    
T  42779640 tagttttaattcaaaaacgttagattttcttcatctt 42779676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 16260990 - 16261032
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  16260990 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 16261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 31450932 - 31450890
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31450932 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 31450890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 39149964 - 39150006
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39149964 tagttttaattcaaaaacgttaggttttcttcatcttcttctc 39150006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 44915859 - 44915901
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  44915859 tagttttaattcaaaaacgttaaattttcttcatcttcttctc 44915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 16655874 - 16655830
Alignment:
Q  178 actagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  16655874 actagttttaattaaaaaacgttaggttttcttcatcttcttctc 16655830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 27246246 - 27246207
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  27246246 ttttaattcaaaaacgttaggttttcttcatcttcttctc 27246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 28203123 - 28203084
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  28203123 ttttaattcaaaaacgttaggttttcttcatcttcttctc 28203084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 34820399 - 34820438
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  34820399 tagttttaattcaaaaacgttaagttttcttcattttctt 34820438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 41377620 - 41377581
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  41377620 tagttttaattcaaaaacgttaggttttcttcatcttctt 41377581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 13354297 - 13354339
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  13354297 tagttttaattcaaaaacgttaggtttacttcatcttcttctc 13354339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 25642388 - 25642430
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  25642388 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 25642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 27132776 - 27132734
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  27132776 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 27132734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 27883588 - 27883630
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  27883588 tagttttaattcaaaaacgttaggttttcttcattttcttctc 27883630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 32933711 - 32933753
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  32933711 tagttttaattcaaaaacgtcaggttttcttcatcttcttctc 32933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 33819516 - 33819558
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  33819516 tagttttaattcaaaaatgttaggttttcttcatcttcttctc 33819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 34127831 - 34127789
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  34127831 tagttttaattcaaaaacgttatgttttcttcatctttttctc 34127789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 36211470 - 36211512
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  36211470 tagttttaattcaaaaacgttaggttttcttcatcatcttctc 36211512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 38275721 - 38275679
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  38275721 tagttttaattcaaaaacgttaggttttcttcattttcttctc 38275679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 39454708 - 39454666
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  39454708 tagttttaattcaaaaacgttagggtttcttcatcttcttctc 39454666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 15137070 - 15137029
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  15137070 tagttttaattcaaaaacgttaggttttcttcattttcttct 15137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 16655726 - 16655767
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  16655726 tagttttaattcaaaaacgttaggttttcttcattttcttct 16655767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 17856319 - 17856360
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  17856319 tagttttaattcaaaaacgttaggttttcttcattttcttct 17856360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 28202980 - 28203021
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  28202980 tagttttaattcaataacgttaggttttcttcatcttcttct 28203021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 28631394 - 28631435
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  28631394 tagttttaattcaaaaacgttaggttttcttcattttcttct 28631435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31450786 - 31450827
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  31450786 tagttttaattcaaaaacgttaggttttcttcattttcttct 31450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 37744654 - 37744613
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  37744654 tagttttaattcaaaaacgttaggttttcttcattttcttct 37744613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 40694441 - 40694400
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  40694441 tagttttaattcaaaaacgttaggttttcttcattttcttct 40694400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41377474 - 41377515
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  41377474 tagttttaattcaaaaacgttaggttttcttcattttcttct 41377515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41659865 - 41659906
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  41659865 tagttttaattcaaaaacgttaggttttcttcattttcttct 41659906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 44612749 - 44612708
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  44612749 tagttttaattcaaaaacgttaggttttcttcattttcttct 44612708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 15829840 - 15829880
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  15829840 tagttttaattcaaaaatgttaaattttcttcatcttcttc 15829880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 13354443 - 13354404
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  13354443 tagttttaattcaaaaacgttaggttttcttcattttctt 13354404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 20908631 - 20908670
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  20908631 tagttttaattcaaaaacgttaggttttcttcattttctt 20908670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 20908777 - 20908738
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  20908777 tagttttaattcaaaaactttaggttttcttcatcttctt 20908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 25642534 - 25642495
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  25642534 tagttttaattcaaaaacgttaggttttcttcattttctt 25642495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 27914156 - 27914117
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  27914156 ttttaattcaaaaacgttaggttttgttcatcttcttctc 27914117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 36442400 - 36442361
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttctt 219  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  36442400 tagttttaattcaaaaacattaggttttcttcatcttctt 36442361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 5961789 - 5961831
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  5961789 tagttttaattcaaaaatgttaggttttcttcatctttttctc 5961831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12304051 - 12304009
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  12304051 tagttttaattcaaaaatgttaggttttcttcatcttattctc 12304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12304420 - 12304378
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  12304420 tagttttaattcaaaaatgttaggttttcttcatcttattctc 12304378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 21470561 - 21470519
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||    
T  21470561 tagttttaattaaaaaacgttaggttttctccatcttcttctc 21470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 28631540 - 28631498
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||  ||||||||||||    
T  28631540 tagttttaattcaaaaacgttaggttttcgccatcttcttctc 28631498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 40694318 - 40694352
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    ||||||||||||||||||| |||||||||||||||    
T  40694318 ttttaattcaaaaacgttaggttttcttcatcttc 40694352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 16261136 - 16261095
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||| ||| ||||||||||| |||||||    
T  16261136 tagttttaattcaaaaacattaggttttcttcattttcttct 16261095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 27246103 - 27246144
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  27246103 tagttttaattaaaaaacgttaggttttcttcattttcttct 27246144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 27883723 - 27883682
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||||||||  |||||||||| |||||||    
T  27883723 tagttttaattcaaaaacgttagattttcttcattttcttct 27883682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33819662 - 33819621
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  33819662 tagttttaattcaaaaatgttaggttttcttcattttcttct 33819621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 37412713 - 37412754
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||| ||||| ||||||||||| |||||||    
T  37412713 tagttttaattcaaaagcgttaggttttcttcattttcttct 37412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 44916005 - 44915964
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||| | ||||||||||| |||||||    
T  44916005 tagttttaattcaaaaacgtgaggttttcttcattttcttct 44915964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16350199 - 16350239
Alignment:
Q  182 gttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||| |||| |||||||||||||| |||||    
T  16350199 gttttaattcaaaaatgttaggttttcttcatctttttctc 16350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 43183703 - 43183743
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttc 220  Q
    ||||||||||||||||||||||  |||||||||| ||||||    
T  43183703 tagttttaattcaaaaacgttatattttcttcattttcttc 43183743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 40472 - 40513
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  40472 tagttttaattcaaaaacgttaagttttcttcattttcttct 40513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 40618 - 40576
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  40618 tagttttaattcaaaaacgttagattttcttcatcttcttctc 40576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 177331 - 177290
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  177331 tagttttaattcaaaaacgttaggttttcttcatcttcttct 177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 11480 - 11438
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  11480 tagttttaattcaaaaacgttaggttttcttcatcttattctc 11438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 11333 - 11374
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  11333 tagttttaattcaaaaacgttaggttttcttcattttcttct 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 13661 - 13703
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  13661 tagttttaattcaaaaacgttaggttttctccatcttcttctc 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 4458 - 4495
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttc 217  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4458 tagttttaattcaaaaacgttaggttttcttcatcttc 4495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 4584 - 4543
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  4584 tagttttaattcaaaaacgttaggttttcttcattttcttct 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 11788 - 11829
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  11788 tagttttaattcaaaaacgttaggttttcttcattttcttct 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 65859 - 65901
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    
T  65859 tagttttaattccaaaacgttaggttttcttcgtcttcttctc 65901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 73191 - 73233
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    
T  73191 tagttttaattccaaaacgttaggttttcttcgtcttcttctc 73233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 66005 - 65964
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  66005 tagttttaattcaaaaatgttaggttttcttcattttcttct 65964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 73337 - 73296
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    ||||||||||||||||| |||| ||||||||||| |||||||    
T  73337 tagttttaattcaaaaatgttaggttttcttcattttcttct 73296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 93310 - 93352
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttctc 222  Q
    |||||||||||||||||||||| | ||| ||||||||||||||    
T  93310 tagttttaattcaaaaacgttagggttttttcatcttcttctc 93352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 26056 - 26097
Alignment:
Q  180 tagttttaattcaaaaacgttaagttttcttcatcttcttct 221  Q
    |||||||||||||||||||||| |||||| |||| |||||||    
T  26056 tagttttaattcaaaaacgttaggttttcatcattttcttct 26097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 1738 - 1706
Alignment:
Q  183 ttttaattcaaaaacgttaagttttcttcatct 215  Q
    ||||||||||||||||||| |||||||||||||    
T  1738 ttttaattcaaaaacgttaggttttcttcatct 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University