View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19242_high_24 (Length: 322)

Name: NF19242_high_24
Description: NF19242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19242_high_24
NF19242_high_24
[»] chr5 (30 HSPs)
chr5 (107-315)||(22870355-22870563)
chr5 (115-292)||(22869612-22869790)
chr5 (107-287)||(20856931-20857113)
chr5 (107-287)||(20857466-20857648)
chr5 (107-287)||(20072789-20072970)
chr5 (106-287)||(39181055-39181237)
chr5 (108-287)||(39181716-39181896)
chr5 (108-287)||(16533545-16533725)
chr5 (108-287)||(20072121-20072301)
chr5 (113-287)||(16532898-16533073)
chr5 (113-287)||(36477296-36477471)
chr5 (113-287)||(36476770-36476945)
chr5 (229-302)||(11741750-11741823)
chr5 (230-296)||(17544285-17544351)
chr5 (230-296)||(20153155-20153221)
chr5 (230-289)||(17544171-17544230)
chr5 (230-289)||(20153041-20153100)
chr5 (230-286)||(21287904-21287960)
chr5 (107-201)||(21978977-21979072)
chr5 (230-289)||(22298665-22298724)
chr5 (230-289)||(33871462-33871521)
chr5 (230-281)||(33871590-33871641)
chr5 (107-184)||(31107930-31108008)
chr5 (106-218)||(14744719-14744832)
chr5 (107-190)||(8654106-8654190)
chr5 (229-288)||(21257408-21257467)
chr5 (230-276)||(8875572-8875618)
chr5 (230-289)||(20152904-20152962)
chr5 (113-190)||(21978034-21978112)
chr5 (111-207)||(31108338-31108434)
[»] chr2 (26 HSPs)
chr2 (108-292)||(25623288-25623473)
chr2 (108-302)||(25624338-25624533)
chr2 (108-287)||(29958467-29958647)
chr2 (108-287)||(20983181-20983361)
chr2 (106-287)||(29957815-29957997)
chr2 (106-287)||(20982522-20982704)
chr2 (233-302)||(6588809-6588878)
chr2 (232-296)||(11830489-11830553)
chr2 (233-295)||(8710706-8710768)
chr2 (230-296)||(15604576-15604642)
chr2 (107-218)||(24387350-24387462)
chr2 (213-287)||(21103187-21103261)
chr2 (230-296)||(41587357-41587423)
chr2 (107-214)||(24388249-24388357)
chr2 (230-301)||(41588290-41588361)
chr2 (230-292)||(15604462-15604524)
chr2 (97-190)||(20101759-20101853)
chr2 (104-185)||(20103166-20103248)
chr2 (230-302)||(202589-202661)
chr2 (244-292)||(8710605-8710653)
chr2 (230-289)||(8342310-8342369)
chr2 (229-302)||(25230224-25230297)
chr2 (230-287)||(39936495-39936552)
chr2 (229-287)||(3555372-3555430)
chr2 (230-287)||(199131-199188)
chr2 (230-271)||(28226006-28226047)
[»] chr7 (55 HSPs)
chr7 (107-302)||(4226124-4226320)
chr7 (106-302)||(47558028-47558225)
chr7 (107-291)||(4227088-4227273)
chr7 (109-299)||(12644041-12644232)
chr7 (107-296)||(45914525-45914713)
chr7 (106-290)||(12643098-12643283)
chr7 (104-287)||(27480667-27480851)
chr7 (113-287)||(22661362-22661537)
chr7 (106-247)||(45915768-45915910)
chr7 (108-287)||(27479987-27480167)
chr7 (165-291)||(47558983-47559106)
chr7 (230-296)||(25628601-25628667)
chr7 (230-308)||(47945471-47945549)
chr7 (230-308)||(47950901-47950979)
chr7 (230-307)||(13384625-13384702)
chr7 (198-287)||(43124400-43124489)
chr7 (230-292)||(18087581-18087643)
chr7 (230-288)||(23058674-23058732)
chr7 (230-296)||(10600186-10600252)
chr7 (230-292)||(12228508-12228570)
chr7 (230-296)||(25453365-25453431)
chr7 (230-296)||(32068333-32068399)
chr7 (230-296)||(42618148-42618214)
chr7 (230-296)||(43266389-43266455)
chr7 (107-223)||(38643549-38643666)
chr7 (230-289)||(42618034-42618093)
chr7 (230-292)||(5455950-5456012)
chr7 (230-296)||(22081682-22081748)
chr7 (230-296)||(32934585-32934651)
chr7 (230-296)||(46205546-46205612)
chr7 (107-207)||(7158230-7158331)
chr7 (230-295)||(28890702-28890767)
chr7 (106-190)||(37284107-37284192)
chr7 (229-289)||(18086411-18086471)
chr7 (229-289)||(33808445-33808505)
chr7 (230-289)||(25628722-25628781)
chr7 (230-289)||(27138185-27138244)
chr7 (230-289)||(32068219-32068278)
chr7 (230-289)||(32934471-32934530)
chr7 (230-292)||(25453251-25453313)
chr7 (230-288)||(33828219-33828277)
chr7 (98-190)||(37289327-37289421)
chr7 (107-207)||(12929286-12929387)
chr7 (107-207)||(12930771-12930872)
chr7 (230-291)||(32688462-32688523)
chr7 (108-215)||(38644652-38644760)
chr7 (230-287)||(18855902-18855959)
chr7 (244-292)||(23058566-23058614)
chr7 (230-282)||(39274994-39275045)
chr7 (198-285)||(29144232-29144319)
chr7 (236-291)||(32687526-32687581)
chr7 (230-285)||(46204544-46204599)
chr7 (230-281)||(22081811-22081862)
chr7 (230-285)||(43266514-43266569)
chr7 (107-190)||(31695631-31695715)
[»] chr4 (50 HSPs)
chr4 (106-290)||(23454952-23455137)
chr4 (99-287)||(23455609-23455798)
chr4 (106-287)||(56556580-56556762)
chr4 (106-287)||(52816343-52816525)
chr4 (106-288)||(52815661-52815844)
chr4 (109-287)||(56557245-56557424)
chr4 (113-287)||(38982516-38982691)
chr4 (108-284)||(38813554-38813731)
chr4 (106-287)||(38814247-38814429)
chr4 (230-296)||(27069033-27069099)
chr4 (230-289)||(50503948-50504007)
chr4 (238-300)||(32063571-32063633)
chr4 (230-296)||(52573351-52573417)
chr4 (230-296)||(54858683-54858749)
chr4 (230-301)||(30641640-30641711)
chr4 (230-296)||(45463310-45463376)
chr4 (230-296)||(51859530-51859596)
chr4 (230-295)||(9731450-9731515)
chr4 (198-287)||(55867362-55867451)
chr4 (230-289)||(27069154-27069213)
chr4 (230-289)||(39666899-39666958)
chr4 (230-289)||(52573472-52573531)
chr4 (230-288)||(147442-147500)
chr4 (230-292)||(10408012-10408074)
chr4 (230-296)||(22718176-22718242)
chr4 (230-296)||(27891707-27891773)
chr4 (230-296)||(39667013-39667079)
chr4 (230-296)||(39701032-39701098)
chr4 (230-296)||(40316902-40316968)
chr4 (230-296)||(40326976-40327042)
chr4 (230-296)||(50504062-50504128)
chr4 (198-287)||(11447977-11448066)
chr4 (230-289)||(39701153-39701212)
chr4 (230-289)||(45463196-45463255)
chr4 (230-289)||(54858804-54858863)
chr4 (230-296)||(10408126-10408192)
chr4 (230-296)||(22986974-22987040)
chr4 (230-291)||(51859649-51859709)
chr4 (236-288)||(50751745-50751797)
chr4 (244-289)||(11524086-11524131)
chr4 (229-288)||(148002-148061)
chr4 (230-285)||(3032705-3032760)
chr4 (108-190)||(54591595-54591678)
chr4 (230-284)||(5818024-5818078)
chr4 (250-296)||(11524186-11524232)
chr4 (106-190)||(55013106-55013190)
chr4 (107-214)||(53477073-53477181)
chr4 (193-247)||(41583519-41583573)
chr4 (230-299)||(39538203-39538272)
chr4 (276-308)||(11446438-11446470)
[»] chr3 (57 HSPs)
chr3 (106-315)||(29192886-29193095)
chr3 (107-287)||(32717025-32717206)
chr3 (106-292)||(29192033-29192220)
chr3 (97-287)||(45279204-45279395)
chr3 (106-287)||(48189019-48189201)
chr3 (144-290)||(32716286-32716432)
chr3 (107-287)||(2943912-2944093)
chr3 (102-287)||(2944586-2944772)
chr3 (108-287)||(11026552-11026732)
chr3 (113-287)||(45278549-45278724)
chr3 (132-287)||(1756575-1756730)
chr3 (132-287)||(48188403-48188558)
chr3 (103-287)||(37249718-37249902)
chr3 (132-288)||(43105258-43105414)
chr3 (132-287)||(43105754-43105909)
chr3 (106-287)||(1757224-1757406)
chr3 (113-287)||(37249204-37249379)
chr3 (145-287)||(11025975-11026117)
chr3 (230-300)||(6956372-6956442)
chr3 (230-296)||(40788657-40788723)
chr3 (230-294)||(52032261-52032325)
chr3 (230-289)||(35643974-35644033)
chr3 (230-296)||(3469323-3469389)
chr3 (233-296)||(29686067-29686130)
chr3 (238-292)||(9368544-9368598)
chr3 (230-292)||(13948903-13948965)
chr3 (230-296)||(29118775-29118841)
chr3 (230-294)||(3596348-3596412)
chr3 (230-289)||(3469444-3469503)
chr3 (230-289)||(29118661-29118720)
chr3 (245-308)||(35759028-35759091)
chr3 (230-289)||(41422095-41422154)
chr3 (230-288)||(37778518-37778576)
chr3 (230-292)||(40788543-40788605)
chr3 (230-296)||(47551616-47551682)
chr3 (230-289)||(10294804-10294862)
chr3 (230-284)||(11910822-11910876)
chr3 (230-296)||(32306547-32306613)
chr3 (230-288)||(32306669-32306727)
chr3 (244-300)||(1078673-1078729)
chr3 (230-286)||(3596232-3596288)
chr3 (236-288)||(4322720-4322772)
chr3 (230-289)||(10307619-10307678)
chr3 (245-300)||(43608717-43608772)
chr3 (230-289)||(52032383-52032442)
chr3 (241-295)||(10294695-10294749)
chr3 (107-190)||(22736707-22736791)
chr3 (248-308)||(41989515-41989575)
chr3 (230-289)||(29686185-29686243)
chr3 (230-289)||(43998268-43998327)
chr3 (229-279)||(41558138-41558188)
chr3 (228-287)||(42855553-42855612)
chr3 (244-294)||(43998384-43998434)
chr3 (113-190)||(44481970-44482048)
chr3 (245-295)||(44960314-44960364)
chr3 (193-247)||(54317919-54317973)
chr3 (230-287)||(47857493-47857550)
[»] chr1 (40 HSPs)
chr1 (106-292)||(13295133-13295320)
chr1 (107-287)||(49093040-49093221)
chr1 (108-287)||(46282071-46282251)
chr1 (113-287)||(46282713-46282888)
chr1 (145-287)||(49093733-49093875)
chr1 (113-287)||(50062868-50063043)
chr1 (150-287)||(50062246-50062383)
chr1 (106-223)||(25065942-25066060)
chr1 (230-296)||(31058294-31058360)
chr1 (230-296)||(40714567-40714633)
chr1 (232-296)||(35038580-35038644)
chr1 (230-289)||(7371413-7371472)
chr1 (230-301)||(32132427-32132498)
chr1 (230-296)||(8898640-8898706)
chr1 (230-296)||(28324927-28324993)
chr1 (230-296)||(49955470-49955536)
chr1 (111-247)||(25064936-25065073)
chr1 (230-290)||(5734132-5734192)
chr1 (230-284)||(45750091-45750145)
chr1 (230-289)||(12905903-12905962)
chr1 (230-289)||(17189077-17189136)
chr1 (230-289)||(35040858-35040917)
chr1 (230-289)||(49955591-49955650)
chr1 (229-295)||(5734951-5735017)
chr1 (230-289)||(45749965-45750024)
chr1 (229-288)||(46899183-46899242)
chr1 (230-289)||(8898761-8898820)
chr1 (230-289)||(40714688-40714746)
chr1 (106-219)||(2828191-2828305)
chr1 (103-172)||(13295615-13295685)
chr1 (230-284)||(30326619-30326673)
chr1 (230-284)||(37929541-37929595)
chr1 (230-286)||(20760752-20760808)
chr1 (229-288)||(46899847-46899906)
chr1 (113-190)||(32619389-32619467)
chr1 (230-289)||(28325048-28325107)
chr1 (152-214)||(6345630-6345692)
chr1 (144-190)||(32622373-32622419)
chr1 (230-275)||(31051073-31051118)
chr1 (106-218)||(32238697-32238810)
[»] chr6 (29 HSPs)
chr6 (1-105)||(32135501-32135605)
chr6 (105-287)||(4117467-4117650)
chr6 (106-287)||(4116797-4116979)
chr6 (106-287)||(14656478-14656660)
chr6 (108-287)||(33399966-33400146)
chr6 (106-287)||(14657129-14657311)
chr6 (107-287)||(33401045-33401227)
chr6 (111-287)||(1661350-1661527)
chr6 (230-296)||(7905480-7905546)
chr6 (230-296)||(21836153-21836219)
chr6 (230-296)||(15913785-15913851)
chr6 (230-296)||(22503011-22503077)
chr6 (241-292)||(8089577-8089628)
chr6 (230-289)||(21836274-21836333)
chr6 (230-296)||(7160927-7160993)
chr6 (230-296)||(12065343-12065409)
chr6 (230-296)||(31407115-31407181)
chr6 (229-288)||(20651132-20651191)
chr6 (230-289)||(31407001-31407060)
chr6 (230-289)||(6517625-6517684)
chr6 (230-289)||(7905366-7905425)
chr6 (230-289)||(10781402-10781461)
chr6 (230-289)||(15913671-15913730)
chr6 (230-289)||(22502897-22502956)
chr6 (238-301)||(3176289-3176352)
chr6 (244-286)||(7161051-7161093)
chr6 (229-283)||(20651899-20651953)
chr6 (106-218)||(17784374-17784487)
chr6 (229-288)||(13379729-13379788)
[»] chr8 (42 HSPs)
chr8 (106-287)||(34213762-34213944)
chr8 (107-287)||(34665769-34665950)
chr8 (106-287)||(34214448-34214631)
chr8 (132-287)||(34666461-34666615)
chr8 (230-296)||(15230168-15230234)
chr8 (230-296)||(25124800-25124866)
chr8 (198-287)||(11761931-11762020)
chr8 (230-291)||(35634341-35634402)
chr8 (230-302)||(2535783-2535855)
chr8 (230-289)||(10445579-10445638)
chr8 (230-296)||(42945351-42945417)
chr8 (230-296)||(44664631-44664697)
chr8 (230-290)||(34177215-34177275)
chr8 (230-294)||(39474668-39474732)
chr8 (230-289)||(37542347-37542406)
chr8 (230-289)||(42945237-42945296)
chr8 (230-296)||(6471813-6471879)
chr8 (230-292)||(15230054-15230116)
chr8 (198-287)||(2534786-2534875)
chr8 (229-301)||(7294223-7294295)
chr8 (109-218)||(1231527-1231637)
chr8 (230-296)||(21432930-21432996)
chr8 (230-296)||(27500325-27500391)
chr8 (107-218)||(1232788-1232898)
chr8 (230-279)||(8997943-8997992)
chr8 (106-218)||(38598962-38599075)
chr8 (230-286)||(21432816-21432872)
chr8 (230-289)||(6471934-6471993)
chr8 (230-289)||(44664752-44664811)
chr8 (229-287)||(34176563-34176621)
chr8 (106-190)||(33497633-33497718)
chr8 (230-286)||(41353820-41353876)
chr8 (230-289)||(27500211-27500270)
chr8 (230-289)||(41353697-41353756)
chr8 (95-207)||(25288076-25288189)
chr8 (108-214)||(7393138-7393245)
chr8 (230-285)||(25124686-25124741)
chr8 (230-289)||(38003578-38003637)
chr8 (230-296)||(37542462-37542528)
chr8 (259-296)||(7983665-7983702)
chr8 (107-190)||(29574741-29574825)
chr8 (238-286)||(38003701-38003749)
[»] scaffold0347 (2 HSPs)
scaffold0347 (108-223)||(13609-13725)
scaffold0347 (110-223)||(14577-14691)
[»] scaffold0328 (2 HSPs)
scaffold0328 (230-296)||(11377-11443)
scaffold0328 (230-289)||(11263-11322)
[»] scaffold0006 (2 HSPs)
scaffold0006 (230-296)||(221912-221978)
scaffold0006 (230-289)||(222033-222092)
[»] scaffold0771 (1 HSPs)
scaffold0771 (230-292)||(1043-1105)
[»] scaffold0388 (2 HSPs)
scaffold0388 (230-296)||(12476-12542)
scaffold0388 (232-289)||(12364-12421)
[»] scaffold0042 (1 HSPs)
scaffold0042 (230-284)||(12029-12083)
[»] scaffold0128 (1 HSPs)
scaffold0128 (230-299)||(19980-20049)
[»] scaffold0599 (1 HSPs)
scaffold0599 (230-284)||(2516-2570)
[»] scaffold0009 (2 HSPs)
scaffold0009 (106-215)||(262433-262543)
scaffold0009 (107-216)||(261000-261110)
[»] scaffold0182 (2 HSPs)
scaffold0182 (107-184)||(14400-14478)
scaffold0182 (106-190)||(13132-13217)
[»] scaffold0775 (2 HSPs)
scaffold0775 (230-287)||(5085-5142)
scaffold0775 (230-286)||(6227-6283)
[»] scaffold0018 (1 HSPs)
scaffold0018 (108-190)||(73109-73192)
[»] scaffold1493 (1 HSPs)
scaffold1493 (95-207)||(580-693)


Alignment Details
Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 107 - 315
Target Start/End: Complemental strand, 22870563 - 22870355
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||||| |||| |||||||||| |||    
T  22870563 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 22870464  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatc 305  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| ||    
T  22870463 ttaaaatttcgtctctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcat-cttcttcgtc 22870365  T
Q  306 cttcttctct 315  Q
    ||||||||||    
T  22870364 cttcttctct 22870355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 115 - 292
Target Start/End: Original strand, 22869612 - 22869790
Alignment:
Q  115 atatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatt 213  Q
    |||||||||| |||| | ||||||||| | |||||||||||||||||  |||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  214 tcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||| ||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  22869712 tcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatc 22869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 287
Target Start/End: Original strand, 20856931 - 20857113
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  |||||||||||||| |||||||| |||| ||||| |||| |||    
T  20856931 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcat 20857030  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaac-aaaatggcatgggaatggacaaaaataccc 287  Q
    || |||||||||| ||||||  |||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  20857031 ttgaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 20857648 - 20857466
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||| ||| |||| | ||||||||| |  ||||||||||||| || ||||||||||||||| |||||||| |||| ||||| |||| |||    
T  20857648 aggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcat 20857549  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaac-aaaatggcatgggaatggacaaaaataccc 287  Q
    || |||||||||| ||||||  |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||    
T  20857548 ttgaaatttcgtccctcttcccggttaatcactgccacctcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 20072970 - 20072789
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||| ||| |||||| |||||||||    ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| |||    
T  20072970 aggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 20072871  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    || ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20072870 ttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 39181055 - 39181237
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||  |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  39181055 aaggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 39181154  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  39181155 tttgaaagttcgtccctcttcccggataatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 39181896 - 39181716
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||  ||| |||||| |||||||||    ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||    
T  39181896 ggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 39181797  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  39181796 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 16533725 - 16533545
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| |||||| ||||||||| |  |||||||||||||| |  | |||| |||||||||||||||| |||| |||  | ||| ||||    
T  16533725 ggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcatt 16533626  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||  || |||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  16533625 tgaaagttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattgacaaaaataccc 16533545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 20072121 - 20072301
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| ||| || ||||||||| |  ||||||||||||||||  | ||||||||||||| ||||||| |||| |||  | ||| ||||    
T  20072121 ggcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatt 20072220  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||   | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20072221 tgaaagttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 16532898 - 16533073
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | |||| |||||||||||||||| |||| |||  | ||| ||||| |||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||  || |||||||||||||||||| |||||| |||||||||||||||||  ||||||||||||    
T  16532998 gttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattcacaaaaataccc 16533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 36477471 - 36477296
Alignment:
Q  113 aaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| ||||||  |||||||| |  |||||||||||||||   |||||||||||||| |||||||| |||| |||  | ||| ||||| |||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| |||| |  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  36477371 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 36476770 - 36476945
Alignment:
Q  113 aaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| ||||||  |||||||| |  ||||||||||||||||  |||||||||||||| |||||||| || | |||  | ||| ||||| |||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||   | ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  36476870 gttcgtccctcttcccagataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 11741823 - 11741750
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    ||||||||||| || |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11741823 gttaatcactgtcaggtcatcaaattagcaaaatggcattggaatggacaaaaataccctcatcatccttcttc 11741750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 17544351 - 17544285
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  17544351 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 17544285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 20153221 - 20153155
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  20153221 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 20153155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 17544171 - 17544230
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  17544171 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 20153041 - 20153100
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  20153041 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 20153100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 21287960 - 21287904
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  21287960 ttaatcaccaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 21979072 - 21978977
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaa 201  Q
    |||||||||||||||||| ||||||  |||||||  | |||||||||||||||| | | |||||||||||| | ||||| ||||| ||||||||||    
T  21979072 aggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaa 21978977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 22298665 - 22298724
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||||| |||||||||||||||    
T  22298665 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaattgacaaaaataccctc 22298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 33871462 - 33871521
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| |||| ||||||||| || ||||||||||||| |||||||||||||||||||    
T  33871462 ttaatcaccgccaagtcatcaaactagcaaaatggcatggaaatggacaaaaataccctc 33871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 33871641 - 33871590
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaa 281  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  33871641 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaa 33871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 31107930 - 31108008
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccatttt 184  Q
    |||||||||||||||||| ||||||  |||||||| | |||||||||||||||||  | |||||||||||| |||||||    
T  31107930 aggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 14744832 - 14744719
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| ||||||  |||||||    |||||||||||||||||  | |||||||||||| |||||||| ||||  ||| ||||| ||    
T  14744832 aaggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatca 14744733  T
Q  205 tttaaaatttcgtc 218  Q
    ||| || |||||||    
T  14744732 tttgaattttcgtc 14744719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 8654106 - 8654190
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||||||||  ||| |||||| |||||||||   ||||||||||||||||   |||||||||||||| |||||||||||||    
T  8654106 aggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccct 8654190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 21257467 - 21257408
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| ||| |||| ||||||||||| |||||||||||| |||||||||||||| ||||    
T  21257467 gttaattactaccacatcatcaaattagcaaaatggcatgagaatggacaaaaatgccct 21257408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 8875572 - 8875618
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatgga 276  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||    
T  8875572 ttaatcactgccacgtcatcaaattagtaaaatggcataggaatgga 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 20152904 - 20152962
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||| ||| ||||||||| ||||||||||||||    
T  20152904 ttaatcactaccaagtcatcaaattagcaaa-tggtatgggaatgaacaaaaataccctc 20152962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 21978112 - 21978034
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||| ||| |||||| ||||||| | | |||||||||||||||||  |||||||||||||| ||| |||| ||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccct 21978034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 31108434 - 31108338
Alignment:
Q  111 ttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccattt 207  Q
    ||||||||| |||| ||||||  || ||||||| ||||||||||||||||   | |||||||||| ||||||||| ||||| |||| ||||| |||||    
T  31108434 ttaaatatgtatttcatccctgcaaatatagac-atttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcattt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 6e-65; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 108 - 292
Target Start/End: Original strand, 25623288 - 25623473
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||||||| |||||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||||| |||| |||||||||| ||||    
T  25623288 ggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 25623387  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25623388 taaaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 25623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 25624533 - 25624338
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||||||| |||||| |||||||||   |||||||||||||||||  |||||||||||||| |||||||  |||| |||||||||| ||||    
T  25624533 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcatt 25624434  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    |||||||||||| |||| |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25624433 taaaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 25624338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 29958647 - 29958467
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||  ||| |||||| ||||||||| || ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||    
T  29958647 ggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcatt 29958548  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29958547 tgaaagttcgtctctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 20983361 - 20983181
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| |||||| |||||||||||  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||    
T  20983361 ggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20983262  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  20983261 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20983181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 29957815 - 29957997
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  29957815 aaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 29957914  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  29957915 tttgaaagttcgtccctcttcccggttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29957997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 20982522 - 20982704
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  20982522 aaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 20982621  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| ||  || |||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  20982622 tttgaaagttaatccctcttcttggataatcactgccacgtcatcaaattagcaaaatggtatgggaattgacaaaaataccc 20982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 6588809 - 6588878
Alignment:
Q  233 atcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  6588809 atcactgccaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaccatccttcttc 6588878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 11830489 - 11830553
Alignment:
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  11830489 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 11830553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 8710768 - 8710706
Alignment:
Q  233 atcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8710768 atcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatc 8710706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 15604642 - 15604576
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15604642 ttaatcactgccccgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 15604576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 24387350 - 24387462
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  |||||||| | |||| ||||||||||||  |||||||||||||| ||||||||||| | |||||||||| |||    
T  24387350 aggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcat 24387449  T
Q  206 ttaaaatttcgtc 218  Q
    || ||| ||||||    
T  24387450 ttgaaaattcgtc 24387462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 21103187 - 21103261
Alignment:
Q  213 ttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21103187 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 21103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 41587357 - 41587423
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  41587357 ttaatcactgtcacgtcatcaaattagcaaaattgcatgggaatggacaaaaataccgtcatcatcc 41587423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 24388357 - 24388249
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  |||||||  | |||||||||||||||||  ||||||||||||||||||||||| |  | |||||||||| |||    
T  24388357 aggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcat 24388258  T
Q  206 ttaaaattt 214  Q
    ||| |||||    
T  24388257 ttagaattt 24388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 41588361 - 41588290
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttctt 301  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| || ||||||||    
T  41588361 ttaatcactgccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctcgtcttccttctt 41588290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 15604462 - 15604524
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  15604462 ttaatcactaccaagtcatgaaattagcaaaatggcatgggaatggacaaaaataccctcatc 15604524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 20101759 - 20101853
Alignment:
Q  97 atttgatttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||| |||| |||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  20101759 atttaattttaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccct 20101853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 20103248 - 20103166
Alignment:
Q  104 ttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttg 185  Q
    ||||||||||||||||| |||||||||| ||||||||| | ||| |||||||||||||  |||||||||||||| ||||||||    
T  20103248 ttaaggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttg 20103166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 202661 - 202589
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    ||||| ||| |||||| ||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||    
T  202661 ttaattactcccacgttatcaaattagcaaaatggcatgagaatagacaaaaataccttcatcatccttcttc 202589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 8710605 - 8710653
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8710605 gtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 8710653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 8342310 - 8342369
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  8342310 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgacaaaaataccctc 8342369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 25230224 - 25230297
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    |||||| |||||||| |||||| |||  |||||||||||| |||||||||||||||||||||  ||||||||||    
T  25230224 gttaattactgccacatcatcagattggcaaaatggcatgcgaatggacaaaaataccctcactatccttcttc 25230297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 39936552 - 39936495
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  39936552 ttaatcaatgccacgtcatcaaattagcaaaatggcatggaaaaggacaaaaataccc 39936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 3555372 - 3555430
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||||||||||  |||||||||||||||||||||||| ||| | ||| ||||||||    
T  3555372 gttaatcactgccagatcatcaaattaacaaaatggcatgagaaagaacataaataccc 3555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 199131 - 199188
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||| |||| ||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  199131 ttaatgactgtcacatcatcaaattaacaaaagagcatgcgaatggacaaaaataccc 199188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 28226047 - 28226006
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatggga 271  Q
    ||||||||| ||| |||||||||||| |||||||||||||||    
T  28226047 ttaatcactaccaagtcatcaaattagcaaaatggcatggga 28226006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 107 - 302
Target Start/End: Original strand, 4226124 - 4226320
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||| |||| ||   ||||||||||||||||||||||| |||| |||||||||| |||    
T  4226124 aggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcat 4226223  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    |||||||||||||  |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4226224 ttaaaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 4226320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 47558028 - 47558225
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||  || ||||||||||| |||||||| |||| |||||||||||||    
T  47558028 aaggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaacca 47558127  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    |||||||||||||| ||||||  | |||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  47558128 tttaaaatttcgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgtcatgggaatggataaaaataccctcatcatccttcttc 47558225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 291
Target Start/End: Complemental strand, 4227273 - 4227088
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| |||||| ||||||||| | ||||||||||||||||   |||||||||||||| ||||||||||||| ||||||||||||||    
T  4227273 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccat 4227174  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcat 291  Q
    ||||||||||||| |||||   |||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||| ||||    
T  4227173 ttaaaatttcgtccctctttccggttaatcactgccacatcataaaattagcaaaatggcatgagaatggacaaaaataccttcat 4227088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 12644232 - 12644041
Alignment:
Q  109 gcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccattt 207  Q
    |||||||||||||||| |||||| |||||| || | |||||||||||||||||  |||||||||||||| |||||||   ||| |||||||||| |||||    
T  12644232 gcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcattt 12644133  T
Q  208 aaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttc 299  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||    
T  12644132 aaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctcatcatccttc 12644041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 296
Target Start/End: Original strand, 45914525 - 45914713
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||| || ||||||||| | ||||||||||||||||| |||||||||||||  || |||||| |||| |||||||||| |||    
T  45914525 aggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaatctctc-attttg-ccctgtaaaaattaatcat 45914622  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||||| ||||||  | |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  45914623 ttaaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcc 45914713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 106 - 290
Target Start/End: Original strand, 12643098 - 12643283
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||||| ||||||||| | ||||||||||||||| |  |||||||||||||| |||||||  ||||  ||||||||||||    
T  12643098 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaacca 12643197  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 290  Q
    |||||||||||||| ||||||  | |||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  12643198 tttaaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcttaatggcataggaatggacaaaaataccctca 12643283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 287
Target Start/End: Complemental strand, 27480851 - 27480667
Alignment:
Q  104 ttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaac 202  Q
    ||||||||||||||||  ||| |||||| ||||||||| |  |||||||||||||||   |  |||||||||||||||||||| |||| |||  | |||     
T  27480851 ttaaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaat 27480752  T
Q  203 catttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||| ||| |||||| |||||| ||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27480751 catttgaaagttcgtccctcttcctggataatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 22661362 - 22661537
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| |||||| ||||||||| |  |||||||||||||||   | ||||||||||||||||||||| |||| |||  | ||| ||||| |||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  22661462 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 22661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 106 - 247
Target Start/End: Complemental strand, 45915910 - 45915768
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||| ||||||||||||||| | |||||  |||| |||||||||| ||    
T  45915910 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatca 45915811  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtca 247  Q
    ||||||||| |||| |||||   | ||||||||||||||||||    
T  45915810 tttaaaattccgtccctctttccgattaatcactgccacgtca 45915768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 27479987 - 27480167
Alignment:
Q  108 ggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| ||||||  |||||||| |   |||||||||||||||  |||||||||||||| | |||||| |||| |||  | ||| ||||    
T  27479987 ggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatt 27480086  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||   | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27480087 tgaaagttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 165 - 291
Target Start/End: Complemental strand, 47559106 - 47558983
Alignment:
Q  165 cttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatgg 264  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||  |||| || ||||||||||| |||   ||| |||||| |||||||     
T  47559106 cttactaatcctcccattttctccctgtaaaaattaaccatttaaaattttgttcctctcctcggttaatcacttcca---cattaaattagcaaaatga 47559010  T
Q  265 catgggaatggacaaaaataccctcat 291  Q
    ||||| |||||||||||||||||||||    
T  47559009 catggaaatggacaaaaataccctcat 47558983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 25628601 - 25628667
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  25628601 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 25628667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 47945471 - 47945549
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatcctt 308  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  47945471 ttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctcatcatccttcttcttcctt 47945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 47950901 - 47950979
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatcctt 308  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  47950901 ttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctcatcatccttcttcttcctt 47950979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 13384625 - 13384702
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatcct 307  Q
    ||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  13384625 ttaattactcccatgtcatcaaattaacaaaatgacatgggaatggacaaaaataccctcatcatccttcttcttcct 13384702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 43124489 - 43124400
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| |||||||||||||||| || |||   ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  43124489 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 43124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 18087643 - 18087581
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18087643 ttaatgactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 18087581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 23058732 - 23058674
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23058732 ttaattactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 23058674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 10600252 - 10600186
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  10600252 ttaatcactgtcatgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 10600186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 12228508 - 12228570
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12228508 ttaatgactgtcacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctcatc 12228570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 25453431 - 25453365
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  25453431 ttaatcaccgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatcc 25453365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 32068399 - 32068333
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||    
T  32068399 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaagaccctcgtcatcc 32068333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 42618214 - 42618148
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  42618214 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatcc 42618148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 43266389 - 43266455
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  43266389 ttaatcactgtcacgtcatcaaattaacaaaatggtatgggaatgaacaaaaataccctcgtcatcc 43266455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 38643549 - 38643666
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  |||||||| | ||||||||||||||||   | |||||||||||| ||||||||  ||| |||||||||| |||    
T  38643549 aggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcat 38643648  T
Q  206 ttaaaatttcgtctctct 223  Q
    |||| |||||||| ||||    
T  38643649 ttaagatttcgtccctct 38643666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 42618034 - 42618093
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  42618034 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 42618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 5455950 - 5456012
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  5455950 ttaattactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatc 5456012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 22081682 - 22081748
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||| ||||||    
T  22081682 ttaatcactgccaagtcatcaaattagcgaaatggcatgagaatggacaaaaataccctcgtcatcc 22081748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 32934651 - 32934585
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  32934651 ttaatcactgtcacgacatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 32934585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 46205612 - 46205546
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  46205612 ttaatcactatcacgtcatcaaattaggaaaatggcatgggaatggacaaaaataccctcgtcatcc 46205546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 7158230 - 7158331
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  |||||||| | ||||||||||||||||   | ||||||||||||||||||||| |||| |||| ||||| |||    
T  7158230 aggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcat 7158329  T
Q  206 tt 207  Q
    ||    
T  7158330 tt 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 28890702 - 28890767
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    |||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  28890702 ttaatcactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaataccctcgtcatc 28890767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 37284107 - 37284192
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||||| ||| |||||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  37284107 aaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccct 37284192  T

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Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 18086411 - 18086471
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  18086411 gttaattactgccatgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 18086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 33808445 - 33808505
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  33808445 gttaatcgctgccccgtcatcaaattagcaaaatgggatgggaatggacaaaaataccctc 33808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 25628781 - 25628722
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||    
T  25628781 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaactaccctc 25628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 27138244 - 27138185
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  27138244 ttaatcaccgccaagtcatcaaattaacaaaataacatgggaatggacaaaaataccctc 27138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 32068219 - 32068278
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  32068219 ttaatcaatgccaagtcatcaaattagcaaaatggcatgggaaaggacaaaaataccctc 32068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 32934471 - 32934530
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  32934471 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccctc 32934530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 25453251 - 25453313
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  25453251 ttaatcactaccaagtcatcaaattagcaaaaaggcatgggaatggacaaaaataccgtcatc 25453313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 33828277 - 33828219
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||    
T  33828277 ttaatcactgtcaaatcatcaaactaacaaaatggcatgggaatggacaaaaataccct 33828219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 37289421 - 37289327
Alignment:
Q  98 tttgatttaa-ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||||| ||||||||||||| ||| |||||| ||||||||| | ||||| |||||||||||  |||||||||||||| |||||||| ||||    
T  37289421 tttgatttaaaggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccct 37289327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 12929286 - 12929387
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  || ||||| |||||||||||||||||||  | |||||||||||| |||||||| ||||  ||| ||||| |||    
T  12929286 aggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcat 12929385  T
Q  206 tt 207  Q
    ||    
T  12929386 tt 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 12930771 - 12930872
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  ||||||||   |||||||||||||||||  | ||||||||||||||||||||| ||||  ||| ||||| |||    
T  12930771 aggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcat 12930870  T
Q  206 tt 207  Q
    ||    
T  12930871 tt 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 32688523 - 32688462
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcat 291  Q
    ||||| |||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||    
T  32688523 ttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaataccctcat 32688462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 38644760 - 38644652
Alignment:
Q  108 ggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||||||| || | |  ||||||||   ||||||||||| ||||| ||||||| |||||||||||||||| || | |||||||||| ||||    
T  38644760 ggcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcatt 38644661  T
Q  207 taaaatttc 215  Q
    ||| |||||    
T  38644660 taagatttc 38644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 18855959 - 18855902
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||| |||| ||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  18855959 ttaatgactgacacgtcatcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 23058566 - 23058614
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  23058566 gtcatcaaattagcaaaatgtcatgggaatggacaaaaatacactcatc 23058614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 39274994 - 39275045
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaa 282  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  39274994 ttaatcactgccacgtcatcaaattagc-aaatggcatgagaatggacaaaaa 39275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 29144319 - 29144232
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatac 285  Q
    |||| ||||||||||||| ||||| ||    ||||||||||| ||  ||||||||||| |||||| | ||||||||||||||||||||    
T  29144319 ttaatcatttaaaatttcatctctatttccagttaatcactgtcatctcatcaaattagcaaaattgtatgggaatggacaaaaatac 29144232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 32687526 - 32687581
Alignment:
Q  236 actgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcat 291  Q
    |||||||| ||||||||||| |||||| |||||||||||||| ||||||| |||||    
T  32687526 actgccacttcatcaaattagcaaaattgcatgggaatggaccaaaatacactcat 32687581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 46204544 - 46204599
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatac 285  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||| ||||||||||    
T  46204544 ttaatcactgctaagtcatcaaattagtaaaatggcatgggaatgaacaaaaatac 46204599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 22081862 - 22081811
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaa 281  Q
    ||||||| ||||| |||||||||||| | |||||| ||||||||||||||||    
T  22081862 ttaatcattgccaagtcatcaaattagccaaatggtatgggaatggacaaaa 22081811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 43266569 - 43266514
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatac 285  Q
    ||||||||| | | |||||||||||| ||||||| |||| ||||||||||||||||    
T  43266569 ttaatcactactaagtcatcaaattagcaaaatgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 31695715 - 31695631
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||| |||||||||||| ||||||  || |||||   ||||||  ||||||||| || |||||||||||||||||||| |||||    
T  31695715 aggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccct 31695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 106 - 290
Target Start/End: Original strand, 23454952 - 23455137
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||||| ||||||||| | |||||||||||||||||  |||||||||||| | |||||||| |||| ||||||||| |||    
T  23454952 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattaccca 23455051  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 290  Q
    ||||||||| |||| |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23455052 tttaaaattccgtccctcttcctgattaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 23455137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 99 - 287
Target Start/End: Complemental strand, 23455798 - 23455609
Alignment:
Q  99 ttgatttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaa 197  Q
    |||||| ||||||||||||||||||| |||||| |||||||||   |||||||||||||| ||  |||||||||||||| |||||||| | || ||||||    
T  23455798 ttgattaaaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaa 23455699  T
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| ||||| |||||||||| ||||||  | |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  23455698 ttaatcatttcaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 23455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 56556580 - 56556762
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||| |  |||||||||||||||   | ||||||||||||||||||||| |||| |||  | ||| ||    
T  56556580 aaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatca 56556679  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  56556680 tttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 56556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 52816525 - 52816343
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||  ||| |||||| ||||||||| |  |||||||||||||| |  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  52816525 aaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatca 52816426  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  52816425 tttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 52816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 106 - 288
Target Start/End: Original strand, 52815661 - 52815844
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||| |  |||||||||| |||||  | ||||||||||||| ||||||| |||| |||  | ||| ||    
T  52815661 aaggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatca 52815760  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
     || ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  52815761 cttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 52815844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 56557424 - 56557245
Alignment:
Q  109 gcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccattt 207  Q
    |||||||||||| ||| |||||| ||||||||| |  |||||||||||||||   | ||||||||||||||||||||| |||| |||  | ||| |||||    
T  56557424 gcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcattt 56557325  T
Q  208 aaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  56557324 gaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcataggaattgacaaaaataccc 56557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 38982691 - 38982516
Alignment:
Q  113 aaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| ||||||  |||||||| |  ||||||||||||||||  |||||||||||||| |||||||| |||| |||  | ||| ||||| |||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| |||| |  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  38982591 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 38982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 284
Target Start/End: Original strand, 38813554 - 38813731
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | |||  |||    
T  38813554 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatt 38813653  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    | ||| |||||| ||||||  || |||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  38813654 tgaaagttcgtccctcttcccggataatcactgccacgtcttcaaattagcaaaatgacatgggaattgacaaaaata 38813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 38814429 - 38814247
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||| | ||||| ||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  38814429 aaggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 38814330  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||| |||| | || |||||||||||||    
T  38814329 tttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgagcattgacaaaaataccc 38814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 27069033 - 27069099
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  27069033 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 27069099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 50503948 - 50504007
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50503948 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 50504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 32063633 - 32063571
Alignment:
Q  238 tgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttct 300  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  32063633 tgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatcatccttct 32063571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 52573351 - 52573417
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  52573351 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtcatcc 52573417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 54858683 - 54858749
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  54858683 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaacagacaaaaataccctcatcatcc 54858749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 30641640 - 30641711
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttctt 301  Q
    ||||| |||| ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  30641640 ttaattactgtcacgtcatcaaattagcaaaatgtcatgggaatggacaaaattaccctcatcatccttctt 30641711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 45463376 - 45463310
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  45463376 ttaatcactaccacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctcgtcatcc 45463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 51859530 - 51859596
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  51859530 ttaatcactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtcatcc 51859596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 9731515 - 9731450
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||    
T  9731515 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaatatcctcgtcatc 9731450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 55867451 - 55867362
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| |||||||||||||||| || |||   ||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||    
T  55867451 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacattggaattgacaaaaataccc 55867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 27069213 - 27069154
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  27069213 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 27069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 39666899 - 39666958
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  39666899 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 39666958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 52573531 - 52573472
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  52573531 ttaatcactgccacgtcatcaaattagcaatatggcatgagaatggacaaaaataccctc 52573472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 147442 - 147500
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  147442 ttaattactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 10408012 - 10408074
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10408012 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcatc 10408074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 22718242 - 22718176
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  22718242 ttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 22718176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 27891707 - 27891773
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||||    
T  27891707 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaatatcctcgtcatcc 27891773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 39667079 - 39667013
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||    
T  39667079 ttaatcaccgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccatcgtcatcc 39667013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 39701032 - 39701098
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  39701032 ttaatcactctcacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctcgtcatcc 39701098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 40316968 - 40316902
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||| ||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  40316968 ttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcc 40316902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 40327042 - 40326976
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||| ||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  40327042 ttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcc 40326976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 50504128 - 50504062
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  50504128 ttaatcactcccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 50504062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 11448066 - 11447977
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| |||||||||||||||| || ||    ||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  11448066 ttaatcatttaaaatttcgtcactatttccagttaatcactgccacatcatcaaattaacaaaatggcatgaaaattgacaaaaataccc 11447977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 39701212 - 39701153
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||||    
T  39701212 ttaatcactgccaagtcatcaaattagcaaaatagtatgggaatggacaaaaataccctc 39701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 45463196 - 45463255
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  45463196 ttaatcactaccaagtcatcaaattagcaaaatagcatgggaatggacaaaaataccctc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 54858863 - 54858804
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  54858863 ttaatcactaccaagtcatcaaattagcaaaatggcatgtgaatggacaaaaataccctc 54858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 10408192 - 10408126
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||| ||||||||||| |||||||  ||| |||||||||||||||||||| ||||||    
T  10408192 ttaatcactgccacatcatcaaattagcaaaatgatatgagaatggacaaaaataccctcgtcatcc 10408126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 22986974 - 22987040
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||| | ||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||    
T  22986974 ttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccctcgtcatcc 22987040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 51859709 - 51859649
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcat 291  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  51859709 ttaatcactcccaagtcatcaaattagcaaaatggcatgggaatggac-aaaataccctcat 51859649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 50751797 - 50751745
Alignment:
Q  236 actgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  50751797 actgccacatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 50751745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 11524086 - 11524131
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||    
T  11524086 gtcatcaaattagcaaaatggcatgggaatagacaaaaataccctc 11524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 148061 - 148002
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| |||| ||||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  148061 gttaattactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaatgccct 148002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 3032705 - 3032760
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatac 285  Q
    |||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||    
T  3032705 ttaatcaccgccaagttatcaaattagcaaaatggcataggaatggacaaaaatac 3032760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 54591678 - 54591595
Alignment:
Q  108 ggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||||||| ||||||  |||||||||  |||||||||||||||||  | |||||||| ||| |||||||| ||||    
T  54591678 ggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccct 54591595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 5818078 - 5818024
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    |||||||||| || ||| |||||||| ||||||||||||||||| ||||||||||    
T  5818078 ttaatcactgtcaagtcttcaaattagcaaaatggcatgggaatagacaaaaata 5818024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 11524232 - 11524186
Alignment:
Q  250 aaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||    
T  11524232 aaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatcc 11524186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 55013190 - 55013106
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||||| ||| |||| | ||||||||| |||||||||||||||| ||  |||||||||||||| ||| |||| ||||    
T  55013190 aaggcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgcccct 55013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 53477181 - 53477073
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||| ||  ||||||||   ||||||||||||||| |  | |||||||||||| |||||||| ||||  ||| ||||| |||    
T  53477181 aggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcat 53477082  T
Q  206 ttaaaattt 214  Q
    || ||||||    
T  53477081 ttgaaattt 53477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 41583573 - 41583519
Alignment:
Q  193 aaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtca 247  Q
    |||| |||| |||||||||||||||| |||||||   ||||||||||||||||||    
T  41583573 aaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtca 41583519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 39538203 - 39538272
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttc 299  Q
    |||||| ||| ||||||||||||||| ||||||| ||||  | || |||||||||||||| || ||||||    
T  39538203 ttaatcgctgtcacgtcatcaaattagcaaaatgacatgtaattgaacaaaaataccctcttcttccttc 39538272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 11446438 - 11446470
Alignment:
Q  276 acaaaaataccctcatcatccttcttcatcctt 308  Q
    ||||||||||||||||||||||||||| |||||    
T  11446438 acaaaaataccctcatcatccttcttcttcctt 11446470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 315
Target Start/End: Complemental strand, 29193095 - 29192886
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||| | |||| ||||||||||  |    
T  29193095 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaatta 29192996  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcat 304  Q
    |||||||||| ||| ||||||  | |||||||||| ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  29192995 tttaaaattttgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccctcatcat-cttcttcat 29192897  T
Q  305 ccttcttctct 315  Q
    |||||||||||    
T  29192896 ccttcttctct 29192886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 32717206 - 32717025
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| |||||| |||||||||   ||||||||||||||||| || ||||||||||||||||||||| |||| |||||||||| |||    
T  32717206 aggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcat 32717107  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||||||||| ||||||    ||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  32717106 ttaaaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaataccc 32717025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 29192033 - 29192220
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    |||||| |||||||||||| |||||| ||||||||| | |||||||||||||| ||  ||||||||||||||||| ||||| |||| |||||||||| ||    
T  29192033 aaggctgaaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatca 29192132  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||||||| ||||||  | ||||||||||||||||||| |||||| ||||||| |||| |||| ||||||||||||||||||    
T  29192133 tttaaaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccctcatc 29192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 97 - 287
Target Start/End: Complemental strand, 45279395 - 45279204
Alignment:
Q  97 atttgatttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaa 195  Q
    |||||||||  ||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||     
T  45279395 atttgatttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaat 45279296  T
Q  196 aattaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     | ||| ||||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  45279295 tactaatcatttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 45279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 48189201 - 48189019
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||| | ||||||||| |  ||||||||||||||||  ||||||||||||||||||||||| |||| |||  | ||| ||    
T  48189201 aaggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatca 48189102  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  48189101 tttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 48189019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 290
Target Start/End: Original strand, 32716286 - 32716432
Alignment:
Q  144 atttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccac 243  Q
    ||||||||||| ||||   || |||||||||||  ||||||  || | ||||||||||||||||||||||||||| ||||||  | ||||||||||||||    
T  32716286 atttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtccctcttccagattaatcactgccac 32716385  T
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 290  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  32716386 gtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 32716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 107 - 287
Target Start/End: Original strand, 2943912 - 2944093
Alignment:
Q  107 aggcttaaatatgcattt-tatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    |||||||||||||| ||| |||||||  |||||||| |  |||||||||||||||  | ||||||||||||| | |||||| |||| ||||| |||| ||    
T  2943912 aggcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcctga-gcttactaatcctcctattttgcccctgtaaaagttaatca 2944010  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2944011 tttgaaagttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 287
Target Start/End: Complemental strand, 2944772 - 2944586
Alignment:
Q  102 atttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaatta 200  Q
    |||| |||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||| ||||||||| |||| |||  | ||    
T  2944772 attttaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattacta 2944673  T
Q  201 accatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||||| ||| |||||| ||||||  |  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2944672 atcatttgaaagttcgtccctcttcccgaataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 287
Target Start/End: Complemental strand, 11026732 - 11026552
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||| ||||||||||||||| |||| |||  | ||| ||||    
T  11026732 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatt 11026633  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||| |   |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11026632 tgaaagttcgtccctcttctcgaaaaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 11026552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 45278549 - 45278724
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| |||||| ||||||||| |  ||||||||||||||||  |  |||||||||||||||||||| |||| |||  | ||| ||||| |||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  45278649 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 45278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 287
Target Start/End: Original strand, 1756575 - 1756730
Alignment:
Q  132 taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggtt 231  Q
    ||||||||| |  |||||||||||||||   | ||||||||||||||||||||| |||| |||  | ||| ||||| ||| |||||| ||||||  || |    
T  1756575 taattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggat 1756674  T
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  1756675 aatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 1756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 287
Target Start/End: Original strand, 48188403 - 48188558
Alignment:
Q  132 taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggtt 231  Q
    ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||| ||| |||||| ||||||  || |    
T  48188403 taattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggat 48188502  T
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  48188503 aatcactgccacgtcatcaaattagcaaaatgccatgggaattgacaaaaataccc 48188558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 103 - 287
Target Start/End: Complemental strand, 37249902 - 37249718
Alignment:
Q  103 tttaaggcttaaatatgcattttatcccttaattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaac 202  Q
    ||||||| | |||||||| ||| ||||   |||||||| |  ||||||||||||||||  |||||||||||||| ||||| || || | |||  | |||     
T  37249902 tttaagggtaaaatatgcttttcatcctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaat 37249803  T
Q  203 catttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  37249802 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 37249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 132 - 288
Target Start/End: Original strand, 43105258 - 43105414
Alignment:
Q  132 taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggtt 231  Q
    ||||||||| |  ||||||||||||||||  | ||||||||||||| ||||||| |||| |||  | ||| | ||| ||| |||||||||||||  || |    
T  43105258 taattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttttgaaagttcgtctctcttcccggat 43105357  T
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  43105358 aatcactgccatgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 43105414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 287
Target Start/End: Complemental strand, 43105909 - 43105754
Alignment:
Q  132 taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggtt 231  Q
    ||||||||| |  ||||||||||||||||  | ||||||||||||| ||||||| |||| |||  | ||| ||||| ||| |||||| ||||||| || |    
T  43105909 taattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtccctcttctcggat 43105810  T
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  43105809 aatcactaccacgtcatcaaattagcaaaatggcattggaattgacaaaaataccc 43105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 1757406 - 1757224
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||  ||| |||||| ||||||||| |  |||||||||||||||   | ||||||||||||||||||||| |||| |||  | ||| ||    
T  1757406 aaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatca 1757307  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| || ||| |||||   || ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  1757306 tttgaaagtttgtccctctttccggataatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 1757224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 37249204 - 37249379
Alignment:
Q  113 aaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| ||||||  |||||||| |  ||||||||||||||||  |||||| ||||||| |||||||| |||| |||  | ||| ||||| |||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| |||| |  || ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  37249304 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatggaaattgacaaaaataccc 37249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 287
Target Start/End: Original strand, 11025975 - 11026117
Alignment:
Q  145 tttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacg 244  Q
    ||||||||||||||||  | ||||||||||||||||||||| | || |||  | ||| ||||| ||| |||||| ||||||  ||||||||||||||| |    
T  11025975 tttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtccctcttcccggttaatcactgccatg 11026074  T
Q  245 tcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||||||| |||||| |||||| ||| |||||||||||||    
T  11026075 tcatcaaattagcaaaatcgcatggaaattgacaaaaataccc 11026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 6956372 - 6956442
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttct 300  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6956372 ttaattactgccacgtcataaaattaacaaaatgacatgggaatggacaaaaataccctcatcatccttct 6956442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 40788723 - 40788657
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  40788723 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 40788657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 52032261 - 52032325
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcat 294  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52032261 ttaatcactaccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcgtcat 52032325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 35643974 - 35644033
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35643974 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 3469323 - 3469389
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  3469323 ttaatcacggccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 3469389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 29686067 - 29686130
Alignment:
Q  233 atcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  29686067 atcactgccacgtcatcaaattagcaaaatggcatgggaatggagaaaaataccctcgtcatcc 29686130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 9368598 - 9368544
Alignment:
Q  238 tgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9368598 tgccacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctcatc 9368544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 13948903 - 13948965
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13948903 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 13948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 29118841 - 29118775
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||    
T  29118841 ttaatcactgccacgtcatcacattagcaaaatggcatgggaatagacaaaaataccctcgtcatcc 29118775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 3596412 - 3596348
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcat 294  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  3596412 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcat 3596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 3469503 - 3469444
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3469503 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 3469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 29118661 - 29118720
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  29118661 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 29118720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 35759091 - 35759028
Alignment:
Q  245 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatcctt 308  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  35759091 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatcttccttcttcttcctt 35759028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 41422095 - 41422154
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  41422095 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 41422154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 37778576 - 37778518
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  37778576 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagacaaaaataccct 37778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 40788543 - 40788605
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40788543 ttaatcactaccaaatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 40788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 47551616 - 47551682
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||    
T  47551616 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaattaccctcgtcatcc 47551682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 10294862 - 10294804
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  10294862 ttaatcactgccaagtcatcaaattaccaaa-tggcatgggaatggacaaaaataccctc 10294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 11910822 - 11910876
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  11910822 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 11910876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 32306547 - 32306613
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||| |||||||||||||||| ||||||| | |||||||||||||||||| |||| ||||||    
T  32306547 ttaatcactaccacgtcatcaaattagcaaaatgacttgggaatggacaaaaatatcctcgtcatcc 32306613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 32306727 - 32306669
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    ||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  32306727 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccct 32306669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 1078673 - 1078729
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttct 300  Q
    |||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||    
T  1078673 gtcatcaaattagcaagatggcacgggaatggacaaaaatactctcatcatccttct 1078729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 3596232 - 3596288
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    ||||||||| ||| |||||||||||| |||||||||||| |||||||||||||||||    
T  3596232 ttaatcactaccatgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 3596288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 4322720 - 4322772
Alignment:
Q  236 actgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  4322720 actgccacatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 4322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 10307678 - 10307619
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||  |||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  10307678 ttaatcactcgcacgtcataaaattagcaaaattgcatgggaatggacaaaaataccctc 10307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 43608772 - 43608717
Alignment:
Q  245 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttct 300  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||    
T  43608772 tcatcaaattagcaagatggcatggaaatggacaaaaataccctcatcattcttct 43608717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 52032442 - 52032383
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||  ||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  52032442 ttaatcaccaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 52032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 10294695 - 10294749
Alignment:
Q  241 cacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    ||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  10294695 cacgtcatcaaattagcaaaatgacatggaaatgtacaaaaataccctcatcatc 10294749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 22736791 - 22736707
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||||||||  ||| |||||| |||||||||   |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  22736791 aggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccct 22736707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 41989575 - 41989515
Alignment:
Q  248 tcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttcatcctt 308  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||||| ||||||||| |||||    
T  41989575 tcaaattagcaaaatggcatgagaatggacaaaaacaccttcatcttccttcttcttcctt 41989515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 29686243 - 29686185
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| ||||| |||||| ||||||||||||| |||||||||||||||||||    
T  29686243 ttaatcactaccaagtcat-aaattagcaaaatggcatggaaatggacaaaaataccctc 29686185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 43998268 - 43998327
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||  ||||||||||||||||||| |||||||| ||||    
T  43998268 ttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggtcaaaaatatcctc 43998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 41558188 - 41558138
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaa 279  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  41558188 gttaattactgccacatcatcaaattatcaaaatggtatgggaatggacaa 41558138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 42855612 - 42855553
Alignment:
Q  228 ggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||||||||| ||  ||||||||||| ||||||||| |||||| ||| ||||||||||    
T  42855612 ggttaatcactgtcagatcatcaaattagcaaaatggcttgggaaaggataaaaataccc 42855553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 43998434 - 43998384
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcat 294  Q
    |||||||||||| ||||||| |||| ||||||||||||||| |||| ||||    
T  43998434 gtcatcaaattagcaaaatgccatgagaatggacaaaaatatcctcgtcat 43998384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 44482048 - 44481970
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||| ||| |||||| ||||||| | | ||||||||||||||||   |||||||||||||| |||||||| ||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccct 44481970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 44960314 - 44960364
Alignment:
Q  245 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    |||||||||||||||||||  |   ||||||||||||||||||||||||||    
T  44960314 tcatcaaattaacaaaatgatacatgaatggacaaaaataccctcatcatc 44960364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 54317973 - 54317919
Alignment:
Q  193 aaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtca 247  Q
    |||| |||| ||||||||||||||||||||| | |  ||||||||||||||||||    
T  54317973 aaaatttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtca 54317919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 47857550 - 47857493
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||| ||||||||||| |||||| |||||| |||| |||| ||||||| ||||||    
T  47857550 ttaatcaatgccacgtcataaaattagcaaaatagcataggaaaggacaaatataccc 47857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 13295133 - 13295320
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| | |||| |||||||||   ||||||||||||| |||  ||||||||||||||||||||||| || | |||||||||| ||    
T  13295133 aaggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatca 13295232  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||| ||||| ||||||  |||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||    
T  13295233 tttaaaatgtcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaataccctcatc 13295320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 287
Target Start/End: Original strand, 49093040 - 49093221
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    ||||||||| |||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| || | |||  | ||| |||    
T  49093040 aggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcat 49093139  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    || ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  49093140 ttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 46282071 - 46282251
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||  ||| |||||| |||||||||    ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||    
T  46282071 ggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 46282170  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  46282171 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 46282888 - 46282713
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||| |||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||  || ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  46282788 gttcgtccctcttcccggataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 49093875 - 49093733
Alignment:
Q  145 tttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacg 244  Q
    ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||| ||| |||||| ||||||  || ||||||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccacg 49093776  T
Q  245 tcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  49093775 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 287
Target Start/End: Complemental strand, 50063043 - 50062868
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaa 211  Q
    |||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| | || |||  | ||| ||||| |||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  212 tttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
     |||||| ||||||  || ||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||    
T  50062943 gttcgtccctcttcccggataatcactgtcacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 50062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 50062246 - 50062383
Alignment:
Q  150 tttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatc 249  Q
    |||||||||||  | |||||||||||||||||||||  ||| |||  | ||| ||||| ||| |||||| ||||||  || |||||||||||||||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccacgtcatc 50062345  T
Q  250 aaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||| ||||||| ||||||||| |||||||||||||    
T  50062346 aaattagcaaaatgacatgggaattgacaaaaataccc 50062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 25066060 - 25065942
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    |||| |||||||||||||| |||||| ||||||||  | |||||||||||||||||  ||||||||||||||||||||||  |||| |||||||||| ||    
T  25066060 aaggtttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatca 25065961  T
Q  205 tttaaaatttcgtctctct 223  Q
    ||||| |||||||| ||||    
T  25065960 tttaagatttcgtccctct 25065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 31058360 - 31058294
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  31058360 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 31058294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 40714567 - 40714633
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  40714567 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 40714633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 35038580 - 35038644
Alignment:
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  35038580 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcatcatcc 35038644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 7371413 - 7371472
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7371413 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 32132427 - 32132498
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttctt 301  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  32132427 ttaattactgccacgtcatcaaattagcaaaatgtcatgggaatggacaaaaataacctcatcatccttctt 32132498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 8898640 - 8898706
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  8898640 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 8898706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 28324927 - 28324993
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  28324927 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcatcc 28324993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 49955470 - 49955536
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  49955470 ttaatcactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 49955536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 247
Target Start/End: Original strand, 25064936 - 25065073
Alignment:
Q  111 ttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaa 209  Q
    |||||||||||||| ||||||  ||||||||   |||||||||||||||||  | |||||||||||| ||||| ||||||| |||||||||| |||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  210 aatttcgtctctcttcttggttaatcactgccacgtca 247  Q
     |||||||| |||| ||   || |||||||||||||||    
T  25065036 gatttcgtccctctcctcacttgatcactgccacgtca 25065073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 5734132 - 5734192
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 290  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5734132 ttaattactgtcacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 5734192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 45750145 - 45750091
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45750145 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 45750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 12905962 - 12905903
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  12905962 ttaatcactgtcaagtcatcaaattaacaaaatggcatgagaatggacaaaaataccctc 12905903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 17189077 - 17189136
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  17189077 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17189136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 35040917 - 35040858
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  35040917 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35040858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 49955650 - 49955591
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  49955650 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 5735017 - 5734951
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatc 295  Q
    |||||| |||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  5735017 gttaattactgtcacgtcatcaaattaacaaaatggcatgagaatagacaaaaatgccctcatcatc 5734951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 45749965 - 45750024
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  45749965 ttaatcactaccaagtcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 45750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 46899183 - 46899242
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  46899183 gttaattactgccacatcatcaaataaacaaaatggcatgggaatggacaaaaatgccct 46899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 8898820 - 8898761
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||| || ||||||||||||||||||||||    
T  8898820 ttaatcactaccaagtcatcaaattagcaaaatgacacgggaatggacaaaaataccctc 8898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 40714746 - 40714688
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  40714746 ttaatcactaccaagtcatcaaattagcaaaatggcat-ggaatggacaaaaataccctc 40714688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 2828191 - 2828305
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||| |  |||||||||  ||||||||||||||||  || |||||||||||||| |||||| | ||  ||| ||||| ||    
T  2828191 aaggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatca 2828290  T
Q  205 tttaaaatttcgtct 219  Q
    ||| || ||||||||    
T  2828291 tttgaattttcgtct 2828305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 13295685 - 13295615
Alignment:
Q  103 tttaaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaa 172  Q
    |||||||||||||||||||||| |||||| ||||||||| | ||||||||||||||| |  ||||||||||    
T  13295685 tttaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaa 13295615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 30326619 - 30326673
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||    
T  30326619 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 37929541 - 37929595
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  37929541 ttaatcactgtaacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 20760808 - 20760752
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    ||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  20760808 ttaatcactaccaaatcatcaaattagcaaaatgacatgggaatggacaaaaatacc 20760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 46899906 - 46899847
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  46899906 gttaattactgtcacgtcatcaaattagtaaaatggcatgggaatgaacaaaaatgccct 46899847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 32619389 - 32619467
Alignment:
Q  113 aaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||| ||| |||||| ||||||| | | |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccct 32619467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 28325107 - 28325048
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||  || |||||||||||| ||||||| ||| |||||||||||||||| ||||    
T  28325107 ttaatcactatcaagtcatcaaattagcaaaatgacataggaatggacaaaaatatcctc 28325048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 6345692 - 6345630
Alignment:
Q  152 tttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaattt 214  Q
    |||||||||  | ||||||||||||||||||||| ||||  ||| ||||| ||||||||||||    
T  6345692 tttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaattt 6345630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 32622419 - 32622373
Alignment:
Q  144 atttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  32622419 atttgatttttcatccctgagcttactaatcctcccattttgcccct 32622373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 31051073 - 31051118
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatgg 275  Q
    ||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  31051073 ttaatcactaccaagtcatcaaattagtaaaatggcatgggaatgg 31051118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 32238697 - 32238810
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    |||||| |||||||||||| ||||||  || ||||| ||||||||  |||||||||  | |||||||||||| |||||||| | || ||||  |||| ||    
T  32238697 aaggctaaaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaatgttaagca 32238796  T
Q  205 tttaaaatttcgtc 218  Q
    ||| ||| ||||||    
T  32238797 tttcaaaattcgtc 32238810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32135501 - 32135605
Alignment:
Q  1 acacactaagtgtccatttgattgcatgtcgagtttttcatgtctactcaaaatcacaacaacttttctatactctgaccgacatacttcctagaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  32135501 acacactaagtgtccatttgattgcatgtcgagtttttcatgtctactcaaaatcacgacaacttttctacactctgaccgacatacttcctagaaattt 32135600  T
Q  101 gattt 105  Q
    |||||    
T  32135601 gattt 32135605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 105 - 287
Target Start/End: Complemental strand, 4117650 - 4117467
Alignment:
Q  105 taaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacc 203  Q
    |||||||||||||||  ||| |||||| ||||||||| |  ||||||||||||||||  |||||||||||||| |||||||| |||| ||||| |||| |    
T  4117650 taaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatc 4117551  T
Q  204 atttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| ||| |||||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  4117550 atttgaaaattcgtccctcttctcggttaatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 4117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 4116797 - 4116979
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||  ||| |||||| ||||||||| |  ||||||||||||||||  |||||||||||||| |||||||| |||| ||||| |||| ||    
T  4116797 aaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatca 4116896  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||| |||||||||||||||| | ||||||||| ||||||||| ||||||| |||||||||||||    
T  4116897 tttgaaaattcgtccctcttctcggttaatcactgccacattatcaaattagcaaaatggcgtgggaattgacaaaaataccc 4116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 14656478 - 14656660
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| ||||||  |||||||| || ||||||||||||||||  |||||||||||||| | |||||| |||| ||||| |||| ||    
T  14656478 aaggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatca 14656577  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  ||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||    
T  14656578 tttgaaagttcgtccctcttcccggttaatcactgccatgtcatcaaattagtaaaatggcatgggaattgacaaaaataccc 14656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 33399966 - 33400146
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||    
T  33399966 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 33400065  T
Q  207 taaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    | ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  33400066 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 33400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 14657311 - 14657129
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| |||||| ||||||||| |  |||||||||| |||||  | ||||||||||||||||||||| |||| |||  | ||| ||    
T  14657311 aaggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatca 14657212  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  14657211 tttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 14657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 33401227 - 33401045
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||| ||| ||||||  |||||||| |  ||||||||||||||||  | |||||||||||| |||||||| |||| ||||| |||| |||    
T  33401227 aggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcat 33401128  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaac-aaaatggcatgggaatggacaaaaataccc 287  Q
    || ||  |||||  ||||||  |||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  33401127 ttgaatattcgtacctcttcccggttaaccactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 33401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 287
Target Start/End: Complemental strand, 1661527 - 1661350
Alignment:
Q  111 ttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaa 209  Q
    |||||||||  ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||  |||| |||  | ||| ||||| |    
T  1661527 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttga 1661428  T
Q  210 aatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    || |||||| ||||||  || |||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  1661427 aagttcgtccctcttcccggataatcacttccacttcatcaaattatcaaaatggcatgggaattgacaaaaataccc 1661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 7905546 - 7905480
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  7905546 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 7905480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 21836153 - 21836219
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  21836153 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 21836219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 15913851 - 15913785
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15913851 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 15913785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 22503077 - 22503011
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  22503077 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 22503011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 8089577 - 8089628
Alignment:
Q  241 cacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8089577 cacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 8089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 21836333 - 21836274
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21836333 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaatatcctc 21836274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 7160927 - 7160993
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  7160927 ttaatcactaccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccctcgtcatcc 7160993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 12065343 - 12065409
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  12065343 ttaatcactgtcaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 12065409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 31407181 - 31407115
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  31407181 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 31407115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 20651132 - 20651191
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  20651132 gttaataactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 20651191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 31407001 - 31407060
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  31407001 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 31407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 6517625 - 6517684
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||| ||||    
T  6517625 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatgaacaaaaatagcctc 6517684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 7905366 - 7905425
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| | || |||||||||||| |||||||||| ||||||||||||||||||||||    
T  7905366 ttaatcaccgtcaagtcatcaaattagcaaaatggcacgggaatggacaaaaataccctc 7905425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 10781461 - 10781402
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||  |||||||||||||||||||||||||||| ||||    
T  10781461 ttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggacaaaaatatcctc 10781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 15913671 - 15913730
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  15913671 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctc 15913730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 22502897 - 22502956
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||| ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||||    
T  22502897 ttaataactgccaagtcatcaaattagcaaaatggtatgagaatggacaaaaataccctc 22502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 3176352 - 3176289
Alignment:
Q  238 tgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttctt 301  Q
    |||||||||||||||||| |||||| | ||| ||||||||||||||||| ||||| | ||||||    
T  3176352 tgccacgtcatcaaattaccaaaatagtatgagaatggacaaaaataccttcatccttcttctt 3176289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 7161093 - 7161051
Alignment:
Q  244 gtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  7161093 gtcatcaaattagcaaaattgcatgggaatggacaaaaatacc 7161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 20651953 - 20651899
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaat 283  Q
    |||||| ||||||||||||| |||||| ||||||| |||||||||||| ||||||    
T  20651953 gttaattactgccacgtcattaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 17784487 - 17784374
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| ||||||  ||| |||| | ||||||||||||||||   | |||||||||||| |||||||| ||||  ||| ||||| ||    
T  17784487 aaggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatca 17784388  T
Q  205 tttaaaatttcgtc 218  Q
    ||| ||| ||||||    
T  17784387 ttttaaaattcgtc 17784374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 13379788 - 13379729
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 288  Q
    |||||| |||| || |||||||||||| ||||||||  ||||||||||||||||| ||||    
T  13379788 gttaattactgtcatgtcatcaaattagcaaaatggtttgggaatggacaaaaatgccct 13379729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 34213762 - 34213944
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||| ||| ||||||  |||||||| |  ||||||||||||||||  |||||||||||||| | |||||| |||| ||||| |||| ||    
T  34213762 aaggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatca 34213861  T
Q  205 tttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34213862 tttgaaagttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 287
Target Start/End: Original strand, 34665769 - 34665950
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| |||    
T  34665769 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 34665868  T
Q  206 ttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    || ||| |||||| ||||||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  34665869 ttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 106 - 287
Target Start/End: Complemental strand, 34214631 - 34214448
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttca-tccccaagcttactaatccttccattttgtccctctaaaaattaacc 203  Q
    ||||||||||||||| ||| |||||| ||||||||| |  |||||||||||| ||||  | ||||||||||||||||||||| |||| |||  | ||| |    
T  34214631 aaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatc 34214532  T
Q  204 atttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| ||| |||||| ||||||  |  ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  34214531 atttgaaagttcgtccctcttcccgaataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34214448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 287
Target Start/End: Complemental strand, 34666615 - 34666461
Alignment:
Q  132 taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatttaaaatttcgtctctcttcttggtt 231  Q
    ||||||||| |  ||||||||||||||||  | ||||||||||||||||||||| |||| |||  | ||| ||||| ||| |||||| ||||||  || |    
T  34666615 taattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaagttcgtccctcttcccggat 34666517  T
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  34666516 aatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 34666461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 15230234 - 15230168
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15230234 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 15230168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 25124866 - 25124800
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  25124866 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatcc 25124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 11761931 - 11762020
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| |||||||||||||||  ||| ||   ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  11761931 ttaatcatttaaaatttcgtacctcatcactgttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccc 11762020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 35634402 - 35634341
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcat 291  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35634402 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcat 35634341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 2535855 - 2535783
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttcttc 302  Q
    ||||| |||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  2535855 ttaatgactgccacatcatcaaattagtaaaatggcatgggaatggacaaaaatacactcatcatccttcttc 2535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 10445638 - 10445579
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  10445638 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 10445579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 42945417 - 42945351
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  42945417 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctcgtcatcc 42945351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 44664631 - 44664697
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||    
T  44664631 ttaatcactgccacgtcatcaaattagcaaaatggcacgggaatggacaaaaatatcctcgtcatcc 44664697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 34177275 - 34177215
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 290  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  34177275 ttaatgactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 34177215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 39474668 - 39474732
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcat 294  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  39474668 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcat 39474732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 37542347 - 37542406
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  37542347 ttaatcaccgccaagtcatcaaattaacaaaatggcatgggaatgaacaaaaataccctc 37542406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 42945237 - 42945296
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  42945237 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 6471813 - 6471879
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||| ||||||    
T  6471813 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggataaaaatatcctcgtcatcc 6471879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 15230054 - 15230116
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    ||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15230054 ttaatcactaccaagttatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 15230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 2534786 - 2534875
Alignment:
Q  198 ttaaccatttaaaatttcgtctctcttcttggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||| |||||||||||||||| || |||   ||||||||||||||| ||||||||||| |||||||| |||| ||| |||||||||||||    
T  2534786 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacatcatcaaattagcaaaatggtatggaaattgacaaaaataccc 2534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 7294223 - 7294295
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttctt 301  Q
    ||||||||||| ||  ||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  7294223 gttaatcactgtcagatcatcaaattagcaaaatggcataagaatggacaaaaataacctcatcatccttctt 7294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 1231527 - 1231637
Alignment:
Q  109 gcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccattt 207  Q
    |||||||||||||||| ||||||  |||||||| |  |||||||||||||||   |||||||||||||| |||||||  |||| |||||||||| |||||    
T  1231527 gcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcattt 1231626  T
Q  208 aaaatttcgtc 218  Q
     ||| ||||||    
T  1231627 gaaaattcgtc 1231637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 21432996 - 21432930
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| ||||| ||||||||| ||||||| |||||||||||| |||||||||||| ||||||    
T  21432996 ttaatcactgacacgttatcaaattagcaaaatgacatgggaatggataaaaataccctcgtcatcc 21432930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 27500391 - 27500325
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||| ||||||||||||| ||||||    
T  27500391 ttaatcactgtcacgtcatcaaattagaaaaattgcatgggaatgggcaaaaataccctcgtcatcc 27500325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 1232898 - 1232788
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||  |||||    ||||| |||||||| |||| |||||||||| |||    
T  1232898 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcat 1232801  T
Q  206 ttaaaatttcgtc 218  Q
    || ||| ||||||    
T  1232800 ttgaaaattcgtc 1232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 8997992 - 8997943
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaa 279  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  8997992 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 38598962 - 38599075
Alignment:
Q  106 aaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| ||||||  |||||||| | |||||||||||||||||  | ||||||||||||  ||||||| ||||  ||| ||||| ||    
T  38598962 aaggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatca 38599061  T
Q  205 tttaaaatttcgtc 218  Q
    ||| ||| ||||||    
T  38599062 tttgaaaattcgtc 38599075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 21432816 - 21432872
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  21432816 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaatacc 21432872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 6471993 - 6471934
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  6471993 ttaatcactaccaagttatcaaattaacaaaatagcatgggaattgacaaaaataccctc 6471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 44664811 - 44664752
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||| ||||| ||||||| |||| |||||||||||||||||||||||||||| ||||    
T  44664811 ttaatcattgccaagtcatcagattagcaaaatggcatgggaatggacaaaaatatcctc 44664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 34176563 - 34176621
Alignment:
Q  229 gttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    ||||||||||| || |||||||||||| ||||||||| |||||| ||||||||||||||    
T  34176563 gttaatcactgtcaggtcatcaaattagcaaaatggcttgggaaaggacaaaaataccc 34176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 33497718 - 33497633
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||||| ||| |||||| |||||||||   ||||||||||||||||   |||||||||||||| |||||||| ||||    
T  33497718 aaggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccct 33497633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 41353876 - 41353820
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    |||||||| | ||||||||||||||| ||||||| |||| |||||||||||||||||    
T  41353876 ttaatcaccgtcacgtcatcaaattagcaaaatgacatgagaatggacaaaaatacc 41353820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 27500211 - 27500270
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    |||||||||  || |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  27500211 ttaatcactatcaagtcatcaaattagcaaaatgacatgagaatggacaaaaataccctc 27500270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 41353697 - 41353756
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||||| ||||||||    
T  41353697 ttaatcactaccaagttatcaaattaacaaaatgacatgagaatggacaaatataccctc 41353756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 25288189 - 25288076
Alignment:
Q  95 aaatttgatttaaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctcta 193  Q
    |||||| |||| |||||||||||||||||| ||| ||  ||||||||   |||||||||||||||||  | ||||||||||||  ||||||| ||||  |    
T  25288189 aaattttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgca 25288090  T
Q  194 aaaattaaccattt 207  Q
    || ||||| |||||    
T  25288089 aatattaatcattt 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 7393245 - 7393138
Alignment:
Q  108 ggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||  ||||| ||||||  ||||||||   |||||||||||||||||  | |||||||||||| ||||||| |||||  ||| ||||| ||||    
T  7393245 ggcttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatt 7393146  T
Q  207 taaaattt 214  Q
    | ||||||    
T  7393145 tgaaattt 7393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 25124686 - 25124741
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatac 285  Q
    |||| |||||||| |||||||||||| |||||||  |||||||| |||||||||||    
T  25124686 ttaaccactgccaagtcatcaaattagcaaaatgatatgggaattgacaaaaatac 25124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 38003578 - 38003637
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||| | | |||||||||||| |||||||| || | |||||||||||||||||||    
T  38003578 ttaatcactactaagtcatcaaattagcaaaatggtatagaaatggacaaaaataccctc 38003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 37542528 - 37542462
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    ||||||||| | |||||||  ||||| ||||||| |||  |||||||||||||||||||| ||||||    
T  37542528 ttaatcactccaacgtcattgaattagcaaaatgacattagaatggacaaaaataccctcgtcatcc 37542462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 7983702 - 7983665
Alignment:
Q  259 aaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  7983702 aaatggcatgggaatgaacaaaaataccctcgtcatcc 7983665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 29574741 - 29574825
Alignment:
Q  107 aggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||| |||||||||||| ||||||  || |||||   ||||||  ||||||||| || |||||||||||||||||||| |||||    
T  29574741 aggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccct 29574825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 38003749 - 38003701
Alignment:
Q  238 tgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    |||||| | ||||||||| |||||||||||| |||| ||||||||||||    
T  38003749 tgccacattatcaaattagcaaaatggcatgagaatagacaaaaatacc 38003701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 13609 - 13725
Alignment:
Q  108 ggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccatt 206  Q
    ||||||||||||||||| ||||||  |||||||| | |||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||| ||||    
T  13609 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcatt 13708  T
Q  207 taaaatttcgtctctct 223  Q
    ||| |||||||| ||||    
T  13709 taagatttcgtccctct 13725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 14691 - 14577
Alignment:
Q  110 cttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccattta 208  Q
    ||||||||||||||| || |||| |||||||| | |||||||||||||||||  |||||||||||||| |||||||| |||| |||||||||| ||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattta 14592  T
Q  209 aaatttcgtctctct 223  Q
    | |||||||| ||||    
T  14591 agatttcgtccctct 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 11443 - 11377
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  11443 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcatcc 11377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 11263 - 11322
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  11263 ttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 221912 - 221978
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  221912 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaataccctcatcatcc 221978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 222092 - 222033
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  222092 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 1043 - 1105
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 292  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1043 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 12542 - 12476
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 296  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || ||||||    
T  12542 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccatcgtcatcc 12476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 12364 - 12421
Alignment:
Q  232 aatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 289  Q
    ||||||| ||| |||||||||||| ||||||| ||||| |||||||||||||| ||||    
T  12364 aatcactcccaagtcatcaaattagcaaaatgacatggaaatggacaaaaatatcctc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 12083 - 12029
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  12083 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 19980 - 20049
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatccttc 299  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||    
T  19980 ttaatgactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatactctcttcttccttc 20049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 2516 - 2570
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaata 284  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  2516 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 2570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 262543 - 262433
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaacca 204  Q
    ||||||||||||||||||| |||||| |||||||||   |||||||||||||||||  | |||||||||||| |||||||  ||||  ||| ||||| ||    
T  262543 aaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatca 262444  T
Q  205 tttaaaatttc 215  Q
    |||||| ||||    
T  262443 tttaaattttc 262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 261000 - 261110
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctctaaaaattaaccat 205  Q
    |||||||||||||||||| ||||||  ||||||||   ||||||||||||||||   |  ||||||||||| |||||||| ||||  ||| ||||| |||    
T  261000 aggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcat 261099  T
Q  206 ttaaaatttcg 216  Q
    || || |||||    
T  261100 ttgaattttcg 261110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 14478 - 14400
Alignment:
Q  107 aggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccatttt 184  Q
    |||||||||||||| ||| | |||| ||||||||| | |||||||||||||||||  |||||||||||||| |||||||    
T  14478 aggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 13132 - 13217
Alignment:
Q  106 aaggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| |  || ||| ||||||| |||||||| ||||    
T  13132 aaggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccct 13217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 5085 - 5142
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 287  Q
    |||||| ||||||||||||||||||| ||||||| ||||| || ||||||||||||||    
T  5085 ttaatcgctgccacgtcatcaaattagcaaaatgacatggaaaaggacaaaaataccc 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 6283 - 6227
Alignment:
Q  230 ttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 286  Q
    ||||| |||||||||||||||||||| |||| |||||| |||| |||||||||||||    
T  6283 ttaatgactgccacgtcatcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 73109 - 73192
Alignment:
Q  108 ggcttaaatatgcattttatccct-taattatagactatttgatttttcatccccaagcttactaatccttccattttgtccct 190  Q
    ||||||||||||| ||| |||||| ||||||| | | |||||| ||||||||||  |||||||||||||| |||||||| ||||    
T  73109 ggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccct 73192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 580 - 693
Alignment:
Q  95 aaatttgatttaaggcttaaatatgcattttatccctt-aattatagactatttgatttttcatccccaagcttactaatccttccattttgtccctcta 193  Q
    |||||| |||| |||||||||||||||||| ||| ||  ||||||||   |||||||||||||||||  | ||||||||||||  ||||||| ||||  |    
T  580 aaattttattttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgca 679  T
Q  194 aaaattaaccattt 207  Q
    || ||||| |||||    
T  680 aatattaatcattt 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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