View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19242_low_43 (Length: 232)
Name: NF19242_low_43
Description: NF19242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19242_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 25630450 - 25630272
Alignment:
| Q |
13 |
tgaagttcaataagaagtccaactgaggaatgcacatgccataactcactctataatctcatgcaataacagtttggcaaatagaagccgactacaaata |
112 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |
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| T |
25630450 |
tgaagttcaataagaagtctaactgaggaatgcacatgccataactcactctataatctcatgcaacaacagtttggaaaatagaagccgactacaaata |
25630351 |
T |
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| Q |
113 |
taacgtttcggtttttatttccttcccactaactgaattcggcacacacatcctctacatagactcattcattctacca |
191 |
Q |
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|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25630350 |
taacgtttaggcttttatttccttcccactaactgaattcggcacacacatcctctacatagactcattcattctacca |
25630272 |
T |
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