View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19246_high_10 (Length: 275)
Name: NF19246_high_10
Description: NF19246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19246_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 16358445 - 16358318
Alignment:
| Q |
31 |
gcattagcatccatttatctttt--atatagtacatctaaatctaaaggcaatgctcctcaatttcaacatgggaaacaaagtagctgaattgttacctt |
128 |
Q |
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| T |
16358445 |
gcattagcatccatttatcttttttatatagtacatctaaatctaaaggcaatgctcctcaatttcaacatgggaaacaaagtagctgaattgttacctt |
16358346 |
T |
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| Q |
129 |
ctggagcccatgttttatattcccttaa |
156 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
16358345 |
ctggagcccatgttttatattcccttaa |
16358318 |
T |
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