View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19246_low_8 (Length: 361)
Name: NF19246_low_8
Description: NF19246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19246_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 87 - 331
Target Start/End: Original strand, 32111264 - 32111508
Alignment:
| Q |
87 |
ttctggattatattttctttcttgacagaaaagttactgagttttaaaattagtcctatatttagagaatgagatagaaggcttaaggggtcgtcatgta |
186 |
Q |
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| T |
32111264 |
ttctggattatattttctttcttgacagaaaagttactgagttttaaaattagtcctatatttagagaatgagatagaaggcttaaggggtcgtcatgta |
32111363 |
T |
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| Q |
187 |
ttgtggtggattatcgttgacttgactccatggaaccaaaaaatgaaacaaagaaaagcaaatgagttaagtatttacctgaggtggagcagtgaacatg |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32111364 |
ttgtggtggattatcgttgacttgactccatggaaccaaaaaatgaaacaaagaaaagcaaatgagttaagtatttacctgaggtggagcagtgaacatg |
32111463 |
T |
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| Q |
287 |
gccaacggtgacaagccaccaccacctcttcctcctcctcctcca |
331 |
Q |
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| T |
32111464 |
gccaacggtgacaagccaccaccacctcttcctcctcctcctcca |
32111508 |
T |
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