View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19246_low_9 (Length: 305)
Name: NF19246_low_9
Description: NF19246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19246_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 298
Target Start/End: Original strand, 31273025 - 31273306
Alignment:
| Q |
18 |
aaatcgacactatgtaacaaagctatgaaaagaagggg-atgaaatccttgagagtgtaacggtggttttgcattctatttaagggaaataacagcagtg |
116 |
Q |
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| T |
31273025 |
aaatcgacactatgtaacaaagctatgaaaagaagggggatgaaatccttgagagtgtaacggtggttttgcattctatttaagggaaataacagcagtg |
31273124 |
T |
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| Q |
117 |
ttgattttgagtcaatgttttgtgcctgaaaagcatgttagcatcatttagaggtgtatatatatagaaagctttggcggtcgttgctcacaaaaataca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31273125 |
ttgattttgagtcaatgttttgtgcctgaaaagcatgttagcatcatttagaggtgtatatatatagaaagctttggcggtcgttgctcacaaaaataca |
31273224 |
T |
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| Q |
217 |
atgcctacacttgtttgagtttgccacatggacatttattcttctctttctcaaatcttaatataaccgccttctacctttg |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
31273225 |
atgcctacacttgtttgagtttgccacatggacatttattcttctctttctcaaatcttaatataaccgccttctatctttg |
31273306 |
T |
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