View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19247_low_12 (Length: 295)
Name: NF19247_low_12
Description: NF19247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19247_low_12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 44 - 295
Target Start/End: Complemental strand, 26852978 - 26852727
Alignment:
| Q |
44 |
aatgttatatatatgtaaacattcatgttcctatcaccagtctaccaaacagcttatgattctaggatgagttgtttctttgttatctatcaagacattt |
143 |
Q |
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| T |
26852978 |
aatgttatatatatgtaaacattcatgttcctatcaccagtctaccaaacagcttatgattctaggatgagttgtttctttgttatctatcaagacattt |
26852879 |
T |
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| Q |
144 |
tgatgaagttatcaagtatttaatcagtgttgccgttttctttatacgtgaaataatattcaagacaaggtaaagaaggcctaacattgttcatgtttca |
243 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26852878 |
tgatgaagttatcaagtatttaatcagtgttgctgttttctttatacgtgaaataatattcaagacaaggtaaagaaggcctaacattgttcatgtttca |
26852779 |
T |
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| Q |
244 |
atcccaaagggcattcttgtgagggggtttgtgatttttactcctgaactat |
295 |
Q |
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| T |
26852778 |
atcccaaagggcattcttgtgagggggtttgtgatttttactcctgaactat |
26852727 |
T |
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