View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19251_high_13 (Length: 334)
Name: NF19251_high_13
Description: NF19251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19251_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 40157996 - 40157682
Alignment:
| Q |
1 |
tttaatcaatagaaaaaagggtaagagaaaacaccagctaccaagttttctattctacctgaaaattaatgggaattgaatgagaaaggttgggtcttgt |
100 |
Q |
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| T |
40157996 |
tttaatcaatagaaaaaagggtaagagaaaacaccagctaccaagttttctattctacctgaaaattaatgggaattgaatgagaaaggttgggtcttgt |
40157897 |
T |
|
| Q |
101 |
tgagtttacctggtagagatgagagaaaaggaggaagattcaaaggcttgtgttcaaaatctctctgttttaattttgtaataataaaaaggaacaatat |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
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| T |
40157896 |
tgagtttacctggtagagatgagagaaaaggaagaagattcaaaggcttgtgttcaaactctctctgttttaattttgtaataataaaaaggaacaagat |
40157797 |
T |
|
| Q |
201 |
gaactaatgttgttagaaaaacatgagaaacggttaaagaacatgttttttgtatcttaacagcatctaaaattctaaaccacgattatccttcttcact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40157796 |
gaactaatgttgttagaaaaacatgagaaacggttaaagaacatgttttttgtatcttaacagcatctaaaattctaaaccacgattatccttcttcact |
40157697 |
T |
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| Q |
301 |
agctgacatagcaca |
315 |
Q |
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||||||||||||||| |
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| T |
40157696 |
agctgacatagcaca |
40157682 |
T |
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