View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19251_low_19 (Length: 256)
Name: NF19251_low_19
Description: NF19251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19251_low_19 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 6 - 256
Target Start/End: Original strand, 47323898 - 47324148
Alignment:
| Q |
6 |
aaatacaaggtacaaagttattattgatgatattgatgttgtttcatgtcttgttgatttgattgaacttagaaaacttggtgataaatcaaatgttggt |
105 |
Q |
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| T |
47323898 |
aaatacaaggtacaaagttattattgatgatgttgatgttgtttcatgtcttgttgatttgattgaacttagaaaacttggtgataaatcaaatgttggt |
47323997 |
T |
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| Q |
106 |
gacatcatcacaaaggtgctagagctacttcttaaacataataataatcatcatcattataaattttctacgaatcttatttcgctagatattatgatgg |
205 |
Q |
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| T |
47323998 |
gacatcatcacaaaggtgctagagctacttcttgaacataataataatcatcatcattataaattttctacgaatcttatttcgctagatattatgatgg |
47324097 |
T |
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| Q |
206 |
ttaggaggaataaggagaaacttatgtcagaggtaaaattggaagaaaaaa |
256 |
Q |
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| T |
47324098 |
ttaggaggaataaggagaaacttatgtcagaggtaaaattagaagaaaaaa |
47324148 |
T |
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