View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19252_high_18 (Length: 214)
Name: NF19252_high_18
Description: NF19252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19252_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 50654023 - 50653851
Alignment:
| Q |
18 |
agtttagggcagaaagagaacagatatcgtacgttttcttcttgattagtcattttccatgattattttctcctctttttcaccctttatattctcaaat |
117 |
Q |
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| T |
50654023 |
agtttagggcagaaagaaaacagatatcgtacgtcttcttcttgattagtcattttccatgattattttctcctcttcttcaccctttatattctcaaat |
50653924 |
T |
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| Q |
118 |
catttgatgagataaaattaatcgcatctaactggcgtagaaagcagctttattttaatatgatttctatatt |
190 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50653923 |
catttgatgagataaaattagtcgcatctaactggcgtagaaagcagctttattttaatatgatttctatatt |
50653851 |
T |
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