View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19252_low_3 (Length: 614)

Name: NF19252_low_3
Description: NF19252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19252_low_3
NF19252_low_3
[»] chr7 (53 HSPs)
chr7 (152-360)||(45463670-45463880)
chr7 (409-603)||(45463929-45464123)
chr7 (160-360)||(4322486-4322688)
chr7 (145-360)||(48303563-48303780)
chr7 (151-360)||(34690994-34691205)
chr7 (409-589)||(48303334-48303514)
chr7 (409-589)||(4322260-4322437)
chr7 (409-604)||(34691254-34691449)
chr7 (153-234)||(30109708-30109789)
chr7 (152-244)||(4321038-4321130)
chr7 (147-257)||(35344309-35344419)
chr7 (152-257)||(46996721-46996826)
chr7 (152-244)||(8421416-8421508)
chr7 (152-244)||(30108565-30108657)
chr7 (152-244)||(46994660-46994752)
chr7 (291-350)||(38613625-38613684)
chr7 (152-243)||(47341719-47341810)
chr7 (152-254)||(38613503-38613605)
chr7 (150-200)||(40785591-40785641)
chr7 (154-244)||(46810707-46810797)
chr7 (152-257)||(33038816-33038921)
chr7 (167-243)||(34785112-34785188)
chr7 (192-243)||(48302191-48302242)
chr7 (151-265)||(34692726-34692840)
chr7 (150-244)||(45465183-45465277)
chr7 (152-241)||(8423316-8423405)
chr7 (152-225)||(34784067-34784140)
chr7 (147-244)||(35342420-35342517)
chr7 (189-244)||(48704246-48704302)
chr7 (291-350)||(2167641-2167700)
chr7 (150-257)||(46812601-46812708)
chr7 (288-350)||(23953964-23954026)
chr7 (148-254)||(38614933-38615039)
chr7 (152-257)||(27955370-27955475)
chr7 (288-352)||(1546446-1546510)
chr7 (288-352)||(46439431-46439495)
chr7 (215-281)||(29996508-29996575)
chr7 (150-241)||(33775406-33775497)
chr7 (146-205)||(36756921-36756980)
chr7 (146-205)||(36766445-36766504)
chr7 (152-205)||(23955323-23955376)
chr7 (291-352)||(39859130-39859191)
chr7 (501-582)||(48704551-48704632)
chr7 (152-244)||(2168833-2168925)
chr7 (299-351)||(2492496-2492548)
chr7 (151-274)||(7401892-7402016)
chr7 (217-265)||(11682846-11682894)
chr7 (189-241)||(20479719-20479771)
chr7 (189-241)||(27666100-27666152)
chr7 (189-241)||(35403619-35403671)
chr7 (292-348)||(35693275-35693331)
chr7 (157-205)||(36762718-36762766)
chr7 (291-347)||(47341588-47341644)
[»] chr6 (25 HSPs)
chr6 (152-360)||(17951956-17952166)
chr6 (409-604)||(17951712-17951907)
chr6 (152-356)||(35175781-35175987)
chr6 (411-604)||(35175534-35175726)
chr6 (409-604)||(34344065-34344260)
chr6 (239-318)||(34343922-34344003)
chr6 (152-254)||(24662480-24662582)
chr6 (150-205)||(30639609-30639664)
chr6 (152-243)||(34345324-34345415)
chr6 (167-257)||(3018451-3018541)
chr6 (152-205)||(4641355-4641408)
chr6 (152-244)||(17950561-17950653)
chr6 (157-243)||(4289423-4289509)
chr6 (152-257)||(2968139-2968244)
chr6 (152-257)||(29077328-29077433)
chr6 (288-352)||(9398819-9398883)
chr6 (152-202)||(35174391-35174441)
chr6 (152-205)||(3018534-3018587)
chr6 (189-281)||(13613576-13613669)
chr6 (152-257)||(29112300-29112405)
chr6 (189-241)||(3456785-3456837)
chr6 (189-241)||(3480657-3480709)
chr6 (288-352)||(11355381-11355445)
chr6 (152-204)||(29114815-29114867)
chr6 (490-598)||(30891512-30891620)
[»] chr4 (62 HSPs)
chr4 (152-360)||(39083639-39083849)
chr4 (152-360)||(39921494-39921704)
chr4 (152-360)||(43779781-43779991)
chr4 (153-356)||(39189383-39189588)
chr4 (409-604)||(39921753-39921948)
chr4 (152-360)||(5484540-5484750)
chr4 (409-604)||(5484799-5484994)
chr4 (409-604)||(39083898-39084093)
chr4 (409-604)||(43779537-43779732)
chr4 (409-602)||(44993959-44994152)
chr4 (161-360)||(44994201-44994402)
chr4 (409-604)||(42880431-42880626)
chr4 (151-360)||(42880675-42880880)
chr4 (160-360)||(32652107-32652309)
chr4 (409-603)||(32652358-32652552)
chr4 (151-244)||(5486051-5486144)
chr4 (409-502)||(39189641-39189734)
chr4 (153-243)||(6999300-6999390)
chr4 (150-243)||(25995112-25995205)
chr4 (152-257)||(44558512-44558617)
chr4 (192-257)||(13450999-13451064)
chr4 (152-244)||(35997766-35997858)
chr4 (152-257)||(10372725-10372830)
chr4 (495-604)||(13450653-13450762)
chr4 (152-244)||(39923006-39923098)
chr4 (152-244)||(42879275-42879367)
chr4 (152-244)||(44792934-44793026)
chr4 (152-244)||(44992808-44992900)
chr4 (152-243)||(13450304-13450395)
chr4 (151-225)||(2350558-2350632)
chr4 (146-244)||(2828410-2828508)
chr4 (157-243)||(32653631-32653717)
chr4 (151-257)||(44794779-44794885)
chr4 (152-257)||(10762581-10762686)
chr4 (147-244)||(39085151-39085248)
chr4 (152-257)||(47941811-47941916)
chr4 (195-243)||(15450416-15450464)
chr4 (490-582)||(25993871-25993963)
chr4 (291-350)||(4519538-4519597)
chr4 (291-352)||(11255841-11255902)
chr4 (299-352)||(27382287-27382340)
chr4 (151-244)||(43778388-43778481)
chr4 (291-352)||(51012087-51012148)
chr4 (145-257)||(35996056-35996168)
chr4 (288-347)||(35996222-35996281)
chr4 (490-561)||(41355919-41355990)
chr4 (162-241)||(41761781-41761860)
chr4 (150-200)||(4520494-4520544)
chr4 (150-199)||(2348767-2348816)
chr4 (151-244)||(10371056-10371149)
chr4 (189-281)||(43519461-43519554)
chr4 (151-244)||(47942745-47942838)
chr4 (189-241)||(833260-833312)
chr4 (291-347)||(2827566-2827622)
chr4 (189-241)||(4173740-4173792)
chr4 (189-241)||(5439647-5439699)
chr4 (288-352)||(35404346-35404410)
chr4 (288-352)||(42980794-42980858)
chr4 (189-241)||(43507204-43507256)
chr4 (189-241)||(43508653-43508705)
chr4 (288-352)||(48813946-48814010)
chr4 (288-352)||(49523283-49523347)
[»] chr1 (41 HSPs)
chr1 (146-360)||(5783358-5783574)
chr1 (409-590)||(5783623-5783804)
chr1 (146-244)||(45379079-45379177)
chr1 (147-244)||(31803699-31803796)
chr1 (152-244)||(5784866-5784958)
chr1 (152-244)||(11152545-11152637)
chr1 (151-257)||(42134481-42134587)
chr1 (152-244)||(27952499-27952591)
chr1 (146-257)||(36895529-36895640)
chr1 (151-254)||(44157432-44157535)
chr1 (152-205)||(35478087-35478140)
chr1 (152-257)||(47269475-47269580)
chr1 (145-257)||(27940601-27940713)
chr1 (152-244)||(33679259-33679351)
chr1 (167-243)||(34041828-34041904)
chr1 (288-351)||(18183846-18183909)
chr1 (290-352)||(34778040-34778102)
chr1 (152-257)||(18183962-18184067)
chr1 (146-243)||(25173031-25173128)
chr1 (152-253)||(46638830-46638931)
chr1 (288-352)||(4855868-4855932)
chr1 (189-241)||(9121703-9121755)
chr1 (189-241)||(34776606-34776658)
chr1 (156-203)||(36894826-36894873)
chr1 (153-204)||(46636766-46636817)
chr1 (288-347)||(46638713-46638772)
chr1 (151-225)||(33685299-33685373)
chr1 (291-352)||(15104603-15104664)
chr1 (291-352)||(27087444-27087505)
chr1 (152-257)||(35479994-35480099)
chr1 (152-205)||(44159332-44159385)
chr1 (152-257)||(51121905-51122010)
chr1 (288-345)||(51122064-51122121)
chr1 (292-352)||(3013371-3013431)
chr1 (189-241)||(4856001-4856053)
chr1 (189-241)||(8169568-8169620)
chr1 (152-244)||(18180500-18180592)
chr1 (288-352)||(33602545-33602609)
chr1 (189-241)||(34778173-34778225)
chr1 (291-347)||(45380890-45380946)
chr1 (189-241)||(46582047-46582099)
[»] chr2 (42 HSPs)
chr2 (152-360)||(28246663-28246873)
chr2 (409-604)||(11022683-11022878)
chr2 (151-360)||(11022927-11023137)
chr2 (409-603)||(28246922-28247116)
chr2 (160-360)||(38148503-38148706)
chr2 (409-601)||(38148755-38148947)
chr2 (18-151)||(37633647-37633780)
chr2 (151-257)||(11315354-11315460)
chr2 (152-241)||(41144-41233)
chr2 (151-244)||(11021532-11021625)
chr2 (149-257)||(37417270-37417378)
chr2 (152-244)||(28248174-28248266)
chr2 (151-204)||(33192-33245)
chr2 (152-352)||(10716804-10717005)
chr2 (152-257)||(15372499-15372604)
chr2 (151-244)||(41708429-41708522)
chr2 (149-257)||(29909679-29909787)
chr2 (151-266)||(17948904-17949019)
chr2 (150-257)||(41706537-41706644)
chr2 (151-225)||(42880829-42880903)
chr2 (160-241)||(39564-39645)
chr2 (495-592)||(11315001-11315098)
chr2 (152-204)||(37418808-37418860)
chr2 (288-352)||(44709666-44709730)
chr2 (150-265)||(361443-361558)
chr2 (189-241)||(14387386-14387438)
chr2 (288-352)||(14389005-14389069)
chr2 (152-244)||(15373887-15373979)
chr2 (288-352)||(17946253-17946317)
chr2 (191-231)||(38150026-38150066)
chr2 (189-241)||(39664803-39664855)
chr2 (162-241)||(16764611-16764690)
chr2 (153-243)||(25619661-25619751)
chr2 (291-348)||(6797669-6797726)
chr2 (152-225)||(7745290-7745363)
chr2 (152-257)||(15432328-15432433)
chr2 (291-352)||(19908167-19908228)
chr2 (288-348)||(7744202-7744262)
chr2 (288-352)||(11315258-11315322)
chr2 (288-348)||(16763234-16763294)
chr2 (288-352)||(17696365-17696429)
chr2 (189-241)||(24205635-24205687)
[»] chr8 (35 HSPs)
chr8 (152-360)||(40020549-40020759)
chr8 (409-604)||(40020305-40020500)
chr8 (160-360)||(28433630-28433832)
chr8 (409-602)||(28433387-28433580)
chr8 (152-243)||(23811565-23811656)
chr8 (152-257)||(31201162-31201267)
chr8 (152-243)||(9184383-9184474)
chr8 (147-257)||(5075363-5075473)
chr8 (152-244)||(31199485-31199577)
chr8 (152-244)||(31823475-31823567)
chr8 (152-204)||(33748332-33748384)
chr8 (151-243)||(44620669-44620761)
chr8 (152-242)||(9186646-9186736)
chr8 (152-257)||(42897793-42897898)
chr8 (288-352)||(5036608-5036672)
chr8 (152-244)||(40019156-40019248)
chr8 (291-352)||(13108258-13108319)
chr8 (189-281)||(27691191-27691284)
chr8 (291-352)||(38547389-38547450)
chr8 (151-244)||(42894775-42894868)
chr8 (157-205)||(461181-461229)
chr8 (152-244)||(24526896-24526988)
chr8 (189-241)||(29239187-29239239)
chr8 (152-244)||(32824270-32824362)
chr8 (189-241)||(33762713-33762765)
chr8 (152-254)||(1320617-1320719)
chr8 (193-243)||(12515125-12515175)
chr8 (151-257)||(33160167-33160273)
chr8 (291-352)||(8609709-8609770)
chr8 (152-257)||(31821418-31821523)
chr8 (189-241)||(601704-601756)
chr8 (288-352)||(9673086-9673150)
chr8 (288-352)||(13486020-13486084)
chr8 (189-241)||(33707243-33707295)
chr8 (291-347)||(42897680-42897736)
[»] chr5 (33 HSPs)
chr5 (409-601)||(42620436-42620628)
chr5 (151-360)||(42620677-42620888)
chr5 (144-243)||(1344814-1344913)
chr5 (152-257)||(38596868-38596973)
chr5 (152-244)||(40330514-40330606)
chr5 (151-257)||(18728621-18728727)
chr5 (152-241)||(32835876-32835965)
chr5 (152-244)||(32089924-32090016)
chr5 (151-257)||(35395332-35395438)
chr5 (152-244)||(33257759-33257851)
chr5 (152-244)||(42619289-42619381)
chr5 (152-254)||(43318082-43318184)
chr5 (152-205)||(35291048-35291101)
chr5 (167-244)||(38176647-38176724)
chr5 (167-244)||(38203871-38203948)
chr5 (291-352)||(7268004-7268065)
chr5 (291-352)||(17574479-17574540)
chr5 (152-257)||(32087514-32087619)
chr5 (152-244)||(18726565-18726657)
chr5 (189-280)||(24541206-24541299)
chr5 (152-257)||(38178112-38178217)
chr5 (152-257)||(38205336-38205441)
chr5 (195-243)||(1343264-1343312)
chr5 (288-352)||(8539834-8539898)
chr5 (291-347)||(18728508-18728564)
chr5 (320-352)||(27349337-27349369)
chr5 (189-241)||(29621816-29621868)
chr5 (291-347)||(32087676-32087732)
chr5 (288-352)||(34327794-34327858)
chr5 (288-348)||(35292287-35292347)
chr5 (189-241)||(40782211-40782263)
chr5 (189-241)||(42473642-42473694)
chr5 (288-348)||(43317965-43318025)
[»] chr3 (48 HSPs)
chr3 (150-360)||(41944574-41944784)
chr3 (409-604)||(41944833-41945028)
chr3 (152-243)||(40963398-40963489)
chr3 (152-257)||(23774152-23774257)
chr3 (152-244)||(48635372-48635464)
chr3 (490-601)||(26448941-26449052)
chr3 (152-257)||(40508930-40509035)
chr3 (152-257)||(48633877-48633982)
chr3 (152-244)||(40508493-40508585)
chr3 (152-243)||(41946099-41946190)
chr3 (150-244)||(45897048-45897142)
chr3 (190-243)||(30501155-30501208)
chr3 (148-244)||(23887194-23887290)
chr3 (152-244)||(33111841-33111933)
chr3 (152-244)||(33850982-33851074)
chr3 (152-243)||(26447723-26447814)
chr3 (146-257)||(41021022-41021133)
chr3 (152-257)||(23888791-23888896)
chr3 (152-244)||(1847644-1847736)
chr3 (288-352)||(53190681-53190745)
chr3 (291-352)||(2226074-2226135)
chr3 (152-253)||(18430294-18430395)
chr3 (152-257)||(33113199-33113304)
chr3 (149-254)||(45257242-45257347)
chr3 (288-352)||(17515469-17515533)
chr3 (288-352)||(23293091-23293155)
chr3 (299-351)||(33113083-33113135)
chr3 (288-352)||(41977908-41977972)
chr3 (288-352)||(44276117-44276181)
chr3 (288-352)||(54898595-54898659)
chr3 (150-225)||(18428747-18428822)
chr3 (152-243)||(51454283-51454374)
chr3 (294-352)||(35905634-35905692)
chr3 (152-257)||(2977348-2977453)
chr3 (189-281)||(3152232-3152325)
chr3 (291-352)||(30599839-30599900)
chr3 (150-243)||(33051465-33051558)
chr3 (189-281)||(44794244-44794337)
chr3 (152-257)||(45898367-45898472)
chr3 (286-347)||(48634039-48634099)
chr3 (193-280)||(2660253-2660341)
chr3 (288-352)||(7884795-7884859)
chr3 (189-241)||(38193510-38193562)
chr3 (189-241)||(41977787-41977839)
chr3 (189-241)||(41979352-41979404)
chr3 (288-352)||(43765296-43765360)
chr3 (189-241)||(46308844-46308896)
chr3 (189-241)||(53094273-53094325)
[»] scaffold0477 (1 HSPs)
scaffold0477 (152-205)||(6705-6758)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-224)||(38297-38375)
[»] scaffold0058 (2 HSPs)
scaffold0058 (189-281)||(3331-3424)
scaffold0058 (189-281)||(4503-4596)
[»] scaffold1454 (1 HSPs)
scaffold1454 (291-352)||(1424-1485)
[»] scaffold0564 (1 HSPs)
scaffold0564 (291-352)||(8422-8483)


Alignment Details
Target: chr7 (Bit Score: 183; Significance: 1e-98; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 45463670 - 45463880
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45463770 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 45463869  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  45463870 aaaatacgaaa 45463880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 409 - 603
Target Start/End: Original strand, 45463929 - 45464123
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  45463929 acccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 45464028  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctct 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  45464029 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctct 45464123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 160 - 360
Target Start/End: Complemental strand, 4322688 - 4322486
Alignment:
Q  160 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatt 259  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4322688 catcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacatccatcaatt 4322589  T
Q  260 tcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaatacg 357  Q
    |||| ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4322588 tcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcacgtgtacagggactaaattgatggaaaatacg 4322489  T
Q  358 aaa 360  Q
    |||    
T  4322488 aaa 4322486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 145 - 360
Target Start/End: Complemental strand, 48303780 - 48303563
Alignment:
Q  145 taaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||| |||| || |||||||||||||||||||||||||| | |||| ||||| ||||| | |||||||| ||||||||||||||||||||||||| ||    
T  48303780 taaaaacgagtaaaccatcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctctaatttaacaaaatatcaaaatagtccctgaatttatt 48303681  T
Q  245 tgacgtccatcaatttcgt-cctccatccaaaaggtc-cttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaa 342  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48303680 tgacgtccatcaatttcgtccctccgtccaaaaggtctgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaa 48303581  T
Q  343 ttgatggaaaatacgaaa 360  Q
    ||||| ||||||||||||    
T  48303580 ttgatagaaaatacgaaa 48303563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 151 - 360
Target Start/End: Original strand, 34690994 - 34691205
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||| || |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  34690994 agagtaaaccatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgt 34691093  T
Q  251 ccatcaatttcgt-cctccatccaaaaggt-ccttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||    
T  34691094 ccatcaatttcgtccctccatccaaaaggtatgttagtgtgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgatg 34691193  T
Q  349 gaaaatacgaaa 360  Q
    ||||||||||||    
T  34691194 gaaaatacgaaa 34691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 409 - 589
Target Start/End: Complemental strand, 48303514 - 48303334
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  48303514 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaattaagtccctgtctgttcttcttccctccattttcacttctccaag 48303415  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttct 589  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||    
T  48303414 atcatcatcctctccggcgatcaagcttgcattttagaaggaagatttcgtctgttttgaaggtaactttgttcatcttct 48303334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 409 - 589
Target Start/End: Complemental strand, 4322437 - 4322260
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  4322437 acccctatgtttgccattaccatacatgctcacctttcatacagaacacatcaactaagtccctgtctgttcttc---cctccattttcacttctccaag 4322341  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttct 589  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4322340 atcatcatcctctccggcaatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttct 4322260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 34691254 - 34691449
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||| ||| ||||||||||| |||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  34691254 acccctatgttttccactaccatacatcctcacatttcatacagaacacatcaactaagtcactgtttgttcttcttccctccattttcacttctccaag 34691353  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||| |||||   |||||||||||||||||||||||||||| | |||||||||||    
T  34691354 atcatcatcctctccggtgatcaagcttgcattttttaaggaagaattcgttcattttgaaggtaacttcgttcatcttcttctcctttttctctg 34691449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 30109789 - 30109708
Alignment:
Q  153 agtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccc 234  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccc 30109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 4321038 - 4321130
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  4321038 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 4321130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 35344419 - 35344309
Alignment:
Q  147 aaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttg 246  Q
    |||||||||||| ||||||||| ||||| ||||||||| ||||| ||||||||||||||  ||||   |||||||||||  || ||||||||||| |  |    
T  35344419 aaaaagagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataag 35344320  T
Q  247 acgtccatcaa 257  Q
    |||||||||||    
T  35344319 acgtccatcaa 35344309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 46996826 - 46996721
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||  ||||   |||||||||||  ||||| ||||||||||  ||||||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtc 46996727  T
Q  252 catcaa 257  Q
    ||||||    
T  46996726 catcaa 46996721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 8421416 - 8421508
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  8421416 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 8421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 30108565 - 30108657
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 30108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 46994660 - 46994752
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| |||||||   ||||   |||||||||||  || ||||||||||||||    
T  46994660 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgtt 46994752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 38613625 - 38613684
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  38613625 tgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgatgga 38613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 47341810 - 47341719
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||   |||||||||||  ||||||||||||||||    
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 38613605 - 38613503
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| | |||||||| ||||||||||||||| ||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 38613506  T
Q  252 cat 254  Q
    |||    
T  38613505 cat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 40785641 - 40785591
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattc 200  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  40785641 aagagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattc 40785591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 46810707 - 46810797
Alignment:
Q  154 gtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||| |||||||||||||||||| || ||||||||||| |||||  ||||   |||||||||||  || ||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 46810797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 33038921 - 33038816
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||| ||||||| |||||||| | ||||||| ||||||| ||||  ||||   |||||||||||  |||||||||||||| |  ||||||    
T  33038921 gagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtc 33038822  T
Q  252 catcaa 257  Q
    ||||||    
T  33038821 catcaa 33038816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 34785188 - 34785112
Alignment:
Q  167 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||||  | |  ||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  34785188 ttcgtccctgaatttgtacgaatcggccaaagtcgtcctccaaattaacgaaatatcaaaatagtccctgaatttgt 34785112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 48302191 - 48302242
Alignment:
Q  192 gccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  48302191 gccaaattcgtccctcaatttaacgaaatatcaaaatagtctctgaatttgt 48302242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 34692840 - 34692726
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||||||||||||| ||  || |||||||| ||  | |||| |||||| || ||  ||||||||||||||| ||||||||||||||||||||   | ||    
T  34692840 agagtgaatcatcaacttgatctctgaatttgcactgatcggtcaaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgt 34692741  T
Q  251 ccatcaatttcgtcc 265  Q
    |||||||||| ||||    
T  34692740 ccatcaattttgtcc 34692726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 45465277 - 45465183
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||| ||||||| |||||||| | ||||||| ||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  45465277 aagagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 45465183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 8423405 - 8423316
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    ||||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||  ||||   |||||||||||  || |||||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 34784067 - 34784140
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    |||||||||||||| ||||||| ||||||| || |  |||||||||||||||| | ||||||||||||| ||||    
T  34784067 gagtgaatcatcaacttcgtccttgaatttgcacgaatcggccaaattcgtcctccaatttaacgaaatgtcaa 34784140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 35342420 - 35342517
Alignment:
Q  147 aaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| |||||||||||||| || ||||||||||| | | |||||||||||||| |||||  ||||   |||||||||||  || ||||||||||||||    
T  35342420 aaaaggagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 35342517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 48704246 - 48704302
Alignment:
Q  189 tcggccaaattcgtccccaaattt-aacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||    
T  48704246 tcggccaaattcgtcccccagttttaacgaaatatcaaaatagtccccgaatttgtt 48704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 2167641 - 2167700
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    ||||||| ||||||||||||| ||||||||||||||| || || ||||||| ||||||||    
T  2167641 tgtgttgtcttgtacacgtggcaaaaagaaagccacgcgttcaaggactaatttgatgga 2167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 46812708 - 46812601
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 249  Q
    ||||||||| |||||| ||||||| |||||||| | | ||||||||||||| ||||  ||||    ||||||||||  |||||||| |||||||  ||||    
T  46812708 aagagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacg 46812609  T
Q  250 tccatcaa 257  Q
    ||||||||    
T  46812608 tccatcaa 46812601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 23953964 - 23954026
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| |  ||||||| ||||||||    
T  23953964 tgttgtgttgtcttgtacacgtggcaaaaaggaagccacgtgttccaggactaatttgatgga 23954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 38615039 - 38614933
Alignment:
Q  148 aaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttga 247  Q
    ||||||||||| |||||| ||||||| | |||||||| ||||||  ||||||| ||||  ||||   |||||||| ||  ||||||||||||||||  ||    
T  38615039 aaaagagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcaga 38614940  T
Q  248 cgtccat 254  Q
    |||||||    
T  38614939 cgtccat 38614933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 27955370 - 27955475
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||| ||||||| |||||||| | || || || |||||| ||||  ||||| ||||||||||||  || |  ||||||||||  ||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtc 27955469  T
Q  252 catcaa 257  Q
    ||||||    
T  27955470 catcaa 27955475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 1546446 - 1546510
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  1546446 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 1546510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 46439495 - 46439431
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || | |  ||||||||||||| ||||||||||||||||||    
T  46439495 tgttgtgttgtcttgtacacgtgtcaacagggcagccacgtgtacatggactaaattgatggaaa 46439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 29996575 - 29996508
Alignment:
Q  215 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||||||| || |||||||||||    |||||||||||| ||||| ||||||||||||||||||    
T  29996575 cgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtcc 29996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 33775406 - 33775497
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    ||||||||||| |||| |||||||||||||||| | ||||||| ||| |||||||   ||||   |||||||||||  || |||||||||||    
T  33775406 aagagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 36756980 - 36756921
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||| ||||||||||||| ||||| |||||||||||| || |||| |||||| |||||    
T  36756980 aaaaaaaagtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccc 36756921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 36766504 - 36766445
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||| ||||||||||||| ||||| |||||||||||| || |||| |||||| |||||    
T  36766504 aaaaaaaagtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccc 36766445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 23955376 - 23955323
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||||||||||| |||||| ||||||||| | || | |||||||||||||||    
T  23955376 gagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtccc 23955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 39859191 - 39859130
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||| ||||||||||    
T  39859191 tgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgatggaaa 39859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 582
Target Start/End: Original strand, 48704551 - 48704632
Alignment:
Q  501 tctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttc 582  Q
    ||||||| ||||||||| ||| ||||||||||  ||  ||||||||||||||| ||||| |||  | |||||||| ||||||    
T  48704551 tctccaaaatcatcatcatcttcggcgatcaacgttagatttttgaaggaagaattcgtctgtggttaaggtaacgtcgttc 48704632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 2168925 - 2168833
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| ||||||| |||||||| |  ||||| |||||||| ||||  |||| |   |||||||||  |||||| ||||||||||    
T  2168925 gagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgtt 2168833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 2492496 - 2492548
Alignment:
Q  299 cttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaa 351  Q
    ||||||||||||| |||||| ||| ||||||| || ||||||| |||||||||    
T  2492496 cttgtacacgtggcaaaaaggaagtcacgtgttcaaggactaatttgatggaa 2492548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 7401892 - 7402016
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||| ||||||||| ||||||| ||||||| ||  | ||  ||| | |||||| | |||||| |||||||||||| | ||||||||||||    |||||    
T  7401892 agagtaaatcatcaaattcgtccttgaatttgcacagatcaaccataatcgtcctccaatttatcgaaatatcaaattcgtccctgaatttaacagacgt 7401991  T
Q  251 ccatcaatttcgtc-ctccatccaa 274  Q
    ||||||| ||| || ||||||||||    
T  7401992 ccatcaaattcatcactccatccaa 7402016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 11682846 - 11682894
Alignment:
Q  217 aaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtcc 265  Q
    |||||||||| |||||| |||||| ||| ||||||||||||||| ||||    
T  11682846 aaatatcaaattagtccttgaattcgttagacgtccatcaatttagtcc 11682894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 20479771 - 20479719
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  20479771 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 27666152 - 27666100
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  27666152 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 35403671 - 35403619
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  35403671 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 348
Target Start/End: Complemental strand, 35693331 - 35693275
Alignment:
Q  292 gtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    |||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||    
T  35693331 gtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 35693275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 36762766 - 36762718
Alignment:
Q  157 aatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||||| |||||||||||||||| | || ||||||||||| |||||    
T  36762766 aatcatcaacttcgtccctgaatttttacggatcggccaaattagtccc 36762718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 47341644 - 47341588
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  47341644 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 47341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 1e-98; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 152 - 360
Target Start/End: Complemental strand, 17952166 - 17951956
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17952066 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 17951967  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  17951966 aaaatacgaaa 17951956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 409 - 604
Target Start/End: Complemental strand, 17951907 - 17951712
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17951907 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 17951808  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  17951807 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 17951712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 152 - 356
Target Start/End: Complemental strand, 35175987 - 35175781
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  252 catcaatttcgt-cctccatccaaaaggtc-cttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35175887 catcaatttcgtccctccgtccaaaaggtctgatagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 35175788  T
Q  350 aaaatac 356  Q
    |||||||    
T  35175787 aaaatac 35175781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 411 - 604
Target Start/End: Complemental strand, 35175726 - 35175534
Alignment:
Q  411 ccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaagat 510  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35175726 ccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaagat 35175627  T
Q  511 catcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  35175626 catcatcctctccggcgatcaagattgcatttttgaaggaaga-ttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 35175534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 34344065 - 34344260
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| ||||||||||| |||||||||| ||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  34344065 acccctatgtttcccattaccatacatcctcacatttcatacagaacgcatcaactaagtccctggttgttcttcttccctccattttcacttctccaag 34344164  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||||    
T  34344165 atcatcatcctctccagcgatcaagcttgcatttttgaaggaagatttcgtctgttttaaaggtaacttcgttcatcttcttctcctttttctctg 34344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 34343922 - 34344003
Alignment:
Q  239 tttgtttgacgtccatcaatttcgtcc-tccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaag 318  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  34343922 tttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaag 34344003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 24662480 - 24662582
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||| ||||||| ||||||| || |  |  | ||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||    
T  24662480 gagtgaatcatcaacttcgtccttgaatttgcacgaatatgtcaaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgtcagacgtc 24662579  T
Q  252 cat 254  Q
    |||    
T  24662580 cat 24662582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 30639609 - 30639664
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  30639609 aagagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccc 30639664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 34345415 - 34345324
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||| ||||||||| || |||||||||||| ||  | ||| |||||| ||||||  ||||||| ||||||||||||||||||||||||||||    
T  34345415 gagtaaatcatcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgt 34345324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 3018541 - 3018451
Alignment:
Q  167 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaa 257  Q
    |||||||||||||||||| | ||||||||| ||||||||  ||||   |||||||||||  ||||||||||||||||  ||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 3018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 4641355 - 4641408
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccc 4641408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 17950561 - 17950653
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||| |||||||||| |||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 17950653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 4289423 - 4289509
Alignment:
Q  157 aatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||| || || ||||||||| ||  | |||| ||||||||||||  ||||||| |||||||||||||||||||| |||||||    
T  4289423 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatttaatgaaatatcaaaatagtccctaaatttgt 4289509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 2968139 - 2968244
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||| |||||| |||||||| |||||  |||||||||||||  ||||   |||||||||||  || ||||||||||| |  ||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 2968238  T
Q  252 catcaa 257  Q
    ||||||    
T  2968239 catcaa 2968244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 29077328 - 29077433
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29077427  T
Q  252 catcaa 257  Q
    ||||||    
T  29077428 catcaa 29077433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 9398819 - 9398883
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  9398819 tgttgtgttgtcctgtacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaa 9398883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 35174391 - 35174441
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgt 202  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  35174391 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgt 35174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 3018587 - 3018534
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||    
T  3018587 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccc 3018534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 13613669 - 13613576
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||| ||||||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || || ||||| ||||||||||||    
T  13613669 tcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtcc 13613576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 29112300 - 29112405
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| || ||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29112399  T
Q  252 catcaa 257  Q
    ||||||    
T  29112400 catcaa 29112405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 3456785 - 3456837
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  3456785 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 3456837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 3480709 - 3480657
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  3480709 tcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 11355381 - 11355445
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  ||||||||||||| ||||||| ||||||||||    
T  11355381 tgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgatggaaa 11355445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 29114867 - 29114815
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 204  Q
    ||||||| |||||| || ||||||||||||||| | |||||||||||| ||||    
T  29114867 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtcc 29114815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 598
Target Start/End: Original strand, 30891512 - 30891620
Alignment:
Q  490 ccattttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttct 589  Q
    |||| ||||| ||||||| || |||| | ||| ||||||||||  ||| |||||||||||||||  |||| | |  | |||||||| |||||| ||||||    
T  30891512 ccatcttcacctctccaaaattatcaccatcttcggcgatcaacgttggatttttgaaggaagaactcgtctatggttaaggtaacatcgttcctcttct 30891611  T
Q  590 tttactttt 598  Q
    ||| |||||    
T  30891612 ttttctttt 30891620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 1e-98; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 39083639 - 39083849
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39083739 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39083838  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  39083839 aaaatacgaaa 39083849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 39921494 - 39921704
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39921594 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacatgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39921693  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  39921694 aaaatacgaaa 39921704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 152 - 360
Target Start/End: Complemental strand, 43779991 - 43779781
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43779891 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 43779792  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  43779791 aaaatacgaaa 43779781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 153 - 356
Target Start/End: Original strand, 39189383 - 39189588
Alignment:
Q  153 agtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 252  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  253 atcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    ||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39189483 atcaatttcgtccctccgtccaaaaggtccgttaatgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 39189582  T
Q  351 aaatac 356  Q
    ||||||    
T  39189583 aaatac 39189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 39921753 - 39921948
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39921753 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 39921852  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  39921853 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 39921948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 5484540 - 5484750
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5484640 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 5484739  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  5484740 aaaatacgaaa 5484750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 5484799 - 5484994
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5484799 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 5484898  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5484899 atcatcttcctcttcggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 5484994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 39083898 - 39084093
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  39083898 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 39083997  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  39083998 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 39084093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 409 - 604
Target Start/End: Complemental strand, 43779732 - 43779537
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43779732 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 43779633  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  43779632 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 43779537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 409 - 602
Target Start/End: Complemental strand, 44994152 - 44993959
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44994152 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 44994053  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctc 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  44994052 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctc 44993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 44994402 - 44994201
Alignment:
Q  161 atcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattt 260  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44994402 atcaatttcatccctaaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattt 44994303  T
Q  261 cgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaatacga 358  Q
    ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  44994302 cgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcatgtgtacagggactaaattgatggaaaatacga 44994203  T
Q  359 aa 360  Q
    ||    
T  44994202 aa 44994201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 409 - 604
Target Start/End: Complemental strand, 42880626 - 42880431
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  42880626 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctttctgttcttcttccctccattttcacttctccaag 42880527  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  42880526 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 42880431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 151 - 360
Target Start/End: Complemental strand, 42880880 - 42880675
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42880880 agagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 42880781  T
Q  251 ccatcaatttcgtcctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||||||     | ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42880780 ccatcaatttcgtcc-----ctaaaaggtccgttagtgtgctgtgttgacttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 42880686  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  42880685 aaaatacgaaa 42880675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 160 - 360
Target Start/End: Original strand, 32652107 - 32652309
Alignment:
Q  160 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatt 259  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32652107 catcaatttcgtcactgaattttcagggttcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatt 32652206  T
Q  260 tcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaatacg 357  Q
    |||| ||||| |||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  32652207 tcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttatacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaatacg 32652306  T
Q  358 aaa 360  Q
    |||    
T  32652307 aaa 32652309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 409 - 603
Target Start/End: Original strand, 32652358 - 32652552
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32652358 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 32652457  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctct 603  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||    
T  32652458 atcatcatcctctccggcgatcaagcttgcatttttgaaggaagattttgtctgttttgaaggtaacttcgttcatcttcttctcctttttctct 32652552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 5486144 - 5486051
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  5486144 agagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 5486051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 409 - 502
Target Start/End: Original strand, 39189641 - 39189734
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttc 502  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  39189641 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccatccattttcacttc 39189734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 6999390 - 6999300
Alignment:
Q  153 agtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||||||||||||||| ||||||| || |  ||||||||||||||||   ||||||| ||||||||||||||||| ||||||||||    
T  6999390 agtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgt 6999300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 25995205 - 25995112
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||||| ||||||| | ||||| || |  |||||||||||  ||||| |||||||||||||||||||||||| |||||||||||    
T  25995205 aagagtgaatcatcaacttcgtccataaatttgcacgaatcggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgt 25995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 44558617 - 44558512
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 44558518  T
Q  252 catcaa 257  Q
    ||||||    
T  44558517 catcaa 44558512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 13451064 - 13450999
Alignment:
Q  192 gccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaa 257  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  13451064 gccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaa 13450999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 35997858 - 35997766
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||||| ||  ||||  | ||||||||||  || ||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgtt 35997766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 10372830 - 10372725
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||||||||  |  |||||||||||||  ||||||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtc 10372731  T
Q  252 catcaa 257  Q
    ||||||    
T  10372730 catcaa 10372725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 495 - 604
Target Start/End: Complemental strand, 13450762 - 13450653
Alignment:
Q  495 ttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttac 594  Q
    ||||| ||||||| |||||| || |||||| |||||||  ||| ||||||||||||||| ||| |||||  | |||||||| |||||| ||||| ||| |    
T  13450762 ttcacctctccaaaatcatcctcatctccgacgatcaacgttggatttttgaaggaagaattcatatgtggttaaggtaacatcgttcctcttccttttc 13450663  T
Q  595 tttttctctg 604  Q
    ||||||||||    
T  13450662 tttttctctg 13450653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 39923098 - 39923006
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||| ||||||||||||||||||||||| |  |||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 39923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 42879275 - 42879367
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||| ||||||||||    
T  42879275 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgtt 42879367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 44792934 - 44793026
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| ||||||||| || ||||||||||| ||| ||||||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  44792934 gagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 44793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 44992808 - 44992900
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||| ||||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgtt 44992900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 13450395 - 13450304
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||| ||||||| ||||||| || |  |  | |||||| |||||| |||||||| |||||| ||||||||||||||||||||    
T  13450395 gagtgaatcatcaacttcgtccttgaatttgcacgaatatgtcaaatttgtcccccaatttaacaaaatatgaaaatagtccctgaatttgt 13450304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 2350632 - 2350558
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||| |||||  ||||   |||||||||||    
T  2350632 agagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaa 2350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 146 - 244
Target Start/End: Complemental strand, 2828508 - 2828410
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| ||||||||||||||| |||||||||||||||| | ||||||||||| || |||||  ||||   |||||||||||  || ||| ||||||||||    
T  2828508 aaaatagagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgtt 2828410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 32653717 - 32653631
Alignment:
Q  157 aatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||| || || ||||||||| ||  | |||| |||||||||||   |||||||||||||||||||||||| |||||||||||    
T  32653717 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgt 32653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 44794885 - 44794779
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| ||||||||| |||||||||||||||   ||||| ||||||||||||  ||||   |||||||||||  || ||||||||||| |  |||||    
T  44794885 agagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgt 44794786  T
Q  251 ccatcaa 257  Q
    |||||||    
T  44794785 ccatcaa 44794779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 10762581 - 10762686
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  10762581 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 10762680  T
Q  252 catcaa 257  Q
    ||||||    
T  10762681 catcaa 10762686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 39085248 - 39085151
Alignment:
Q  147 aaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| |||||||||||||| |||||||||||||||| | ||||||| ||| ||||||||  ||||   |||||||||||  || ||| ||||||||||    
T  39085248 aaaatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgtt 39085151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 47941811 - 47941916
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||| ||||||||||||| | ||||||| |||||||||| |  ||||   |||||||||||  || ||||||||||| |  ||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 47941910  T
Q  252 catcaa 257  Q
    ||||||    
T  47941911 catcaa 47941916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 15450464 - 15450416
Alignment:
Q  195 aaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgt 15450416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 582
Target Start/End: Original strand, 25993871 - 25993963
Alignment:
Q  490 ccattttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttc 582  Q
    |||| ||||| ||||||| ||||||||| ||| ||||||||||  ||| ||||||||||||||| ||| |||||  | |||||||| ||||||    
T  25993871 ccatcttcacctctccaaaatcatcatcatcttcggcgatcaacgttgaatttttgaaggaagaattcatatgtggttaaggtaacgtcgttc 25993963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 4519538 - 4519597
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    ||||||| ||||||||||||| |||||||||| ||||||| || ||||||| ||||||||    
T  4519538 tgtgttgtcttgtacacgtggcaaaaagaaagtcacgtgttcaaggactaatttgatgga 4519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 11255902 - 11255841
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  11255902 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 11255841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 27382287 - 27382340
Alignment:
Q  299 cttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||||||||  || |||||||||||||||||| ||||||| ||||||||||    
T  27382287 cttgtacacgtgtcaacaagaaagccacgtgtacaaggactaatttgatggaaa 27382340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 43778388 - 43778481
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| ||| ||||||||  ||||   |||||||||||  || ||||| ||||||||    
T  43778388 agagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgtt 43778481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 51012087 - 51012148
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  51012087 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 51012148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 35996056 - 35996168
Alignment:
Q  145 taaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||| |||||||| ||||||||| ||| ||| ||||| | ||||||| ||||||||||||  ||||   | |||||||||  || ||||||||||| |     
T  35996056 taaaatagagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatc 35996155  T
Q  245 tgacgtccatcaa 257  Q
     ||||||||||||    
T  35996156 agacgtccatcaa 35996168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 35996222 - 35996281
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  35996222 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 561
Target Start/End: Complemental strand, 41355990 - 41355919
Alignment:
Q  490 ccattttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtat 561  Q
    |||| ||||| ||||||| ||||||||| |||| ||| |||||  ||| ||||||||||||||| |||||||    
T  41355990 ccatcttcacctctccaaaatcatcatcatctctggcaatcaacgttggatttttgaaggaagaattcgtat 41355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 41761860 - 41761781
Alignment:
Q  162 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||| ||||||| ||||||||||    ||||||||||||||||| ||||||  ||||||||| |  ||||||||||||||    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattt 41761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 4520544 - 4520494
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattc 200  Q
    |||||||||||||||| ||||||| |||||||| | | |||||||||||||    
T  4520544 aagagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattc 4520494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 2348767 - 2348816
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaatt 199  Q
    |||||| ||||||||| |||||| |||||||||||  |||||||||||||    
T  2348767 aagagtaaatcatcaacttcgtcgctgaattttcacaggtcggccaaatt 2348816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 10371056 - 10371149
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||| |||||| || ||||||||||||||| | |||||| ||||| |||||  ||||   |||||||||||  |  ||||||||||||||    
T  10371056 agagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtt 10371149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 43519461 - 43519554
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||     ||||||||||| | ||| ||||| ||||||||||||    
T  43519461 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggtcc 43519554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 47942838 - 47942745
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||| || || | |||||| ||| ||||||| ||||||||||||  ||||   |||||||||||  || ||| ||||||||||    
T  47942838 agagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgtt 47942745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 833260 - 833312
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||   |||||||||||||||||||||||||||    
T  833260 tcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 2827566 - 2827622
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||| ||||| || ||| ||||||||||| |||||||||| |||||    
T  2827566 tgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 2827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 4173792 - 4173740
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  4173792 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 5439699 - 5439647
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||   |||||||||||||||||||||||||||    
T  5439699 tcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 35404410 - 35404346
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | |||||| |||  || |||| |||||||||||||  |||||||||||||||||    
T  35404410 tgttgtgttgtcatgtacatgtgtcaacaagacagccacgtgtacaatgactaaattgatggaaa 35404346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 42980794 - 42980858
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||| || ||||||||||  |||||||||||||||||    
T  42980794 tgttgtgttgtcctgtacacgtgtcaacaagacagtcacgtgtacaaagactaaattgatggaaa 42980858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 43507204 - 43507256
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  43507204 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 43508705 - 43508653
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  43508705 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 48813946 - 48814010
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | |||||| |||  || |||  ||||||||||||| ||||||||||||||||||    
T  48813946 tgttgtgttgtcatgtacatgtgttaacaaggcagccacgtgtacaaggactaaattgatggaaa 48814010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 49523283 - 49523347
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||| | || ||||||||  |||||||||||||||||    
T  49523283 tgttgtgttgtcttgtacacgtgtcaacaagacaaccgcgtgtacaaagactaaattgatggaaa 49523347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 1e-92; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 146 - 360
Target Start/End: Original strand, 5783358 - 5783574
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgttt 245  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  5783358 aaaaacgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgttt 5783457  T
Q  246 gacgtccatcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaat 343  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5783458 gacgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaat 5783557  T
Q  344 tgatggaaaatacgaaa 360  Q
    |||||||||||||||||    
T  5783558 tgatggaaaatacgaaa 5783574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 409 - 590
Target Start/End: Original strand, 5783623 - 5783804
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  5783623 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 5783722  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttctt 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  5783723 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgctttgaaggtaacttcgttcatcttctt 5783804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 45379079 - 45379177
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||  || ||||| ||||||||    
T  45379079 aaaaaggagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgtt 45379177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 31803796 - 31803699
Alignment:
Q  147 aaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||   ||||   |||||||||||  || ||||||||||||||    
T  31803796 aaaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgtt 31803699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 5784958 - 5784866
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 5784866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 11152545 - 11152637
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||  || |||| |||||||||    
T  11152545 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgtt 11152637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 42134481 - 42134587
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| |||||| ||||||| |||||||| | |||||||||||| || ||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  42134481 agagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 42134580  T
Q  251 ccatcaa 257  Q
    |||||||    
T  42134581 ccatcaa 42134587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 27952591 - 27952499
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| ||||||||| || ||||||||||| ||| ||||||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  27952591 gagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 27952499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 36895640 - 36895529
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgttt 245  Q
    ||||| ||||||| |||||| || ||||||||||||||| | ||||| ||| |||||||   ||||   |||||||||||  ||||||||||||||||      
T  36895640 aaaaatgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtca 36895541  T
Q  246 gacgtccatcaa 257  Q
    ||||||||||||    
T  36895540 gacgtccatcaa 36895529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 44157432 - 44157535
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| ||||||  |||||| | |||||||| ||||||||||||||| ||||  ||||   | |||||||||  ||||||||||||||||| |||||    
T  44157432 agagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgt 44157531  T
Q  251 ccat 254  Q
    ||||    
T  44157532 ccat 44157535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 35478087 - 35478140
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||| |||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccc 35478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 47269580 - 47269475
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | |||||||||||| |||||  ||||  ||||||| ||||  |  |||||||||||||   |||||    
T  47269580 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtc 47269481  T
Q  252 catcaa 257  Q
    ||||||    
T  47269480 catcaa 47269475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 27940601 - 27940713
Alignment:
Q  145 taaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||| ||||||| ||||||||| |||||||||||||||  ||| || ||||||||||||  ||||   |||||||||||  || ||| ||||||| |     
T  27940601 taaaaacgagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatc 27940700  T
Q  245 tgacgtccatcaa 257  Q
     ||||||||||||    
T  27940701 agacgtccatcaa 27940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 33679259 - 33679351
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||||||||||||||  ||||   |||||||||||  || ||| ||||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgtt 33679351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 34041904 - 34041828
Alignment:
Q  167 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||||||||| || |  | | |||||||||||||  |||||||||||  |||||||||||||||||||||||    
T  34041904 ttcgtccctgaatttgcacgaatggaccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgt 34041828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 288 - 351
Target Start/End: Complemental strand, 18183909 - 18183846
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaa 351  Q
    |||||||||| ||||||||||||| |||||  ||||||||||| || ||||||| |||||||||    
T  18183909 tgttgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatggaa 18183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 34778102 - 34778040
Alignment:
Q  290 ttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  34778102 ttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 18184067 - 18183962
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||  |||||||| | || ||||||||| || ||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18183968  T
Q  252 catcaa 257  Q
    ||||||    
T  18183967 catcaa 18183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 25173128 - 25173031
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||  ||||||||||| ||||||  ||||||| ||    || ||||||||  ||||  |||||||||||||||||||||||||| |||||||||    
T  25173128 aaaaaaggatgaatcatcaacttcgtctttgaatttgcataaatcagccaaatttatcccttaatttaacgaaatatcaaaatagtccttgaatttgt 25173031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 46638931 - 46638830
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||| |||||||||||| | ||||||||| ||| ||||  ||||   |||||||||||  |||||| |||||||||  ||||||    
T  46638931 gagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 46638832  T
Q  252 ca 253  Q
    ||    
T  46638831 ca 46638830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 4855932 - 4855868
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  || |||||||||| ||||||||||||||||||    
T  4855932 tgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 4855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 9121755 - 9121703
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| |||||||| ||||||  |||||||||||| ||||||||||||||    
T  9121755 tcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 9121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 34776606 - 34776658
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||    
T  34776606 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 36894826 - 36894873
Alignment:
Q  156 gaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtc 203  Q
    |||||||||| |||||||||||||||| | ||||||||||| ||||||    
T  36894826 gaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtc 36894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 46636766 - 46636817
Alignment:
Q  153 agtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 204  Q
    ||||||||||||| |||||| ||||||||||| |||||||| || |||||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtcc 46636817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 46638772 - 46638713
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    |||||||||| ||||||| ||||| |||||| ||||||||||| ||||||| || |||||    
T  46638772 tgttgtgttgtcttgtacgcgtggcaaaaaggaagccacgtgttcagggacgaatttgat 46638713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 33685373 - 33685299
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    |||||||| |||||| |||||||||||||||| | ||||||| ||||||| ||||  ||||   |||||||||||    
T  33685373 agagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaa 33685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 15104603 - 15104664
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||| ||||||||||    
T  15104603 tgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaa 15104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 27087444 - 27087505
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||| ||||||||||||    
T  27087444 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactgaattgatggaaa 27087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 35480099 - 35479994
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||||| || || ||||||||| ||||  ||||   |||||||||||  || ||  |||||||||  ||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtc 35480000  T
Q  252 catcaa 257  Q
    ||||||    
T  35479999 catcaa 35479994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 44159385 - 44159332
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    |||||||||||||| ||||||||||||||||||  | |||| ||| ||||||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtccc 44159332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 51121905 - 51122010
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||| ||||||| ||||||| || |  || |||||  |||| |||||||||  | |||||||||  | |||||||||||| | | |||||    
T  51121905 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaacatcgttcccaaattttgcaaaatatcaatttcgtccctgaatttctctcacgtc 51122004  T
Q  252 catcaa 257  Q
    ||||||    
T  51122005 catcaa 51122010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 51122064 - 51122121
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattg 345  Q
    |||||||||| | ||||||||||  |||||| ||| |||||||||| |||||||||||    
T  51122064 tgttgtgttgtcatgtacacgtgtcaaaaaggaagtcacgtgtacaaggactaaattg 51122121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 3013431 - 3013371
Alignment:
Q  292 gtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||| | ||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  3013431 gtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 3013371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 4856053 - 4856001
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||| ||||||  |||||  |||||||||||| ||||||||||||||    
T  4856053 tcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 8169620 - 8169568
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||| || |||||||||| ||||||||||||||    
T  8169620 tcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 18180500 - 18180592
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||| |||| || ||||||||||||||| |  |||||||||||| ||||  ||||   |||||||||||  || | ||||||||||||    
T  18180500 gagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgtt 18180592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 33602609 - 33602545
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  |  |||  ||||| ||||||| ||||||||||||||||||    
T  33602609 tgttgtgttgtcttgtacacgtgtcagcaagtcagccatgtgtacaaggactaaattgatggaaa 33602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 34778225 - 34778173
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||| ||||||  |||||  |||||||||||| ||||||||||||||    
T  34778225 tcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 45380946 - 45380890
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  45380946 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 45380890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 46582047 - 46582099
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  46582047 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 28246663 - 28246873
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtc 28246762  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28246763 catcaatttcgtccctctgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 28246862  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  28246863 aaaatacgaaa 28246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 409 - 604
Target Start/End: Complemental strand, 11022878 - 11022683
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  11022878 acccctatgtttgccattaccatacatcctcatatttcatacataacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 11022779  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  11022778 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 11022683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 151 - 360
Target Start/End: Complemental strand, 11023137 - 11022927
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11023137 agagggaaccatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 11023039  T
Q  251 ccatcaatttcgtcc-tccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||||| ||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11023038 ccatcaattccgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 11022939  T
Q  349 gaaaatacgaaa 360  Q
    ||||||||||||    
T  11022938 gaaaatacgaaa 11022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 409 - 603
Target Start/End: Original strand, 28246922 - 28247116
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||||| ||||||    
T  28246922 acccctatgtttaccattaccatacatcctcatatttcatacagaacacatcaactaagtgtctgtctgttcttcttccctccattttcacttgtccaag 28247021  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctct 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| | ||||||||||    
T  28247022 atcatcatcctctccggcgatcaagattgcatttttgaaggaagattttgtttgttttgaaggtaactttgttcatcttcttctcctttttctct 28247116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 160 - 360
Target Start/End: Original strand, 38148503 - 38148706
Alignment:
Q  160 catcaatttcgtccctgaattttcaggggtcgg-ccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaat 258  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38148503 catcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaat 38148602  T
Q  259 ttcgtcc-tccatccaaaaggtc-cttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaatac 356  Q
    ||||||| ||| |||||||||||  |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||     
T  38148603 ttcgtccatccgtccaaaaggtctgttagtgtgttgtattggcttgtacacgtcggaaaaaggaagccacgtgtacagggactaaattgatggaaaatat 38148702  T
Q  357 gaaa 360  Q
    ||||    
T  38148703 gaaa 38148706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 409 - 601
Target Start/End: Original strand, 38148755 - 38148947
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| |||||  |||||| ||||||||||| |||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  38148755 acccctatgtttctcattaccatacatcctcacatttcatacagaacacatcaactaagttccagtctgttcttcttccctccattttcacttctccaag 38148854  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttct 601  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| | ||||||||    
T  38148855 atcatcatcctctcccgcgatcaagcttgcatttttgaaggaagatttcgtctggtttaaaggtaacttcgttcatcttcttctcctttttct 38148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 37633647 - 37633780
Alignment:
Q  18 atatatggatatctctgtgttgcagttggctcaatttcaattgagtgtgtattattgatgtgaaagtgaaaccgatttaggaaaaaatttgaggtgttga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  37633647 atatatggatatctctgtgttgcagttggctcaatttcaattgagtgtgtattattgatgtgaaagtgaaaccgatttagggaaaaatttgaggtgttta 37633746  T
Q  118 gttggaaaatactgtaaaaactagagataaaaaa 151  Q
    ||||||||||||||||||||||||||||||||||    
T  37633747 gttggaaaatactgtaaaaactagagataaaaaa 37633780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 11315460 - 11315354
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||||||||||||| ||||||| | |||||| | |  |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||  |||||    
T  11315460 agagtgaatcatcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgt 11315361  T
Q  251 ccatcaa 257  Q
    |||||||    
T  11315360 ccatcaa 11315354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 41233 - 41144
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||  ||||   |||||||||||  || |||||||||||    
T  41233 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 11021532 - 11021625
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  11021532 agagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 11021625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 37417270 - 37417378
Alignment:
Q  149 aaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgac 248  Q
    |||||||||| |||||  ||||||| |||||||||| ||||||||||||||| ||||  ||||   |||||||||||  ||||||||||||||||  |||    
T  37417270 aaagagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 37417369  T
Q  249 gtccatcaa 257  Q
    |||||||||    
T  37417370 gtccatcaa 37417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 28248266 - 28248174
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 28248174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 33192 - 33245
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 204  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  33192 agagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcc 33245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 352
Target Start/End: Complemental strand, 10717005 - 10716804
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||||||||| | |||||||  | |  || | ||||||||||||  |||||||| ||||||||||||||||| | ||||| |  ||||||    
T  10717005 gagtgaatcatcaatttcgttcatgaatttgtacgaatctgtcaaattcgtcccataatttaacaaaatatcaaaatagtccttaaatttttcagacgtc 10716906  T
Q  252 catcaatttcgtcctc-catccaaaaggtccttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgga 350  Q
    ||||||  | ||| |  |||||||| | |   | |  |||||||||| ||||||||||||  || ||| |||||||||||||| |||| || ||||||||    
T  10716905 catcaaaatggtcatttcatccaaatgctttgttgcatgttgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgatgga 10716806  T
Q  351 aa 352  Q
    ||    
T  10716805 aa 10716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 15372499 - 15372604
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||  ||||   | |||||||||  || ||||||||||| |  ||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtc 15372598  T
Q  252 catcaa 257  Q
    ||||||    
T  15372599 catcaa 15372604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 41708522 - 41708429
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||| || ||| ||||||| ||| ||||||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  41708522 agagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 41708429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 29909787 - 29909679
Alignment:
Q  149 aaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgac 248  Q
    |||||||||| |||||| || ||||||||||||||| | ||||||||| || |||||  ||||   |||||||||||  |||||||| |||||||  |||    
T  29909787 aaagagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagac 29909688  T
Q  249 gtccatcaa 257  Q
    |||||||||    
T  29909687 gtccatcaa 29909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 17949019 - 17948904
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||||||||||||| ||||||| ||||||| || |  || |||||| ||||||||||||||  |||||||||||  | |||| |||||||||   | ||    
T  17949019 agagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgtaaaatgt 17948920  T
Q  251 ccatcaatttcgtcct 266  Q
    | ||||||||||||||    
T  17948919 caatcaatttcgtcct 17948904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 41706537 - 41706644
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 249  Q
    ||||||||| ||||||||| || |||||||||||| ||||||| ||||||||||||  ||||   |||||||||||  || ||||||||||| |   |||    
T  41706537 aagagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacg 41706636  T
Q  250 tccatcaa 257  Q
    ||||||||    
T  41706637 tccatcaa 41706644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 42880903 - 42880829
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    ||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||  ||||   |||||||||||    
T  42880903 agagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaa 42880829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 39564 - 39645
Alignment:
Q  160 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||  ||||   |||||||||||  || |||||||||||    
T  39564 catcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 592
Target Start/End: Complemental strand, 11315098 - 11315001
Alignment:
Q  495 ttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttctttt 592  Q
    ||||| ||||||| ||||||||| |||||  ||||||| |||| ||||||||||||||| ||||| |||  | |||||||| | |||| |||||||||    
T  11315098 ttcacctctccaaaatcatcatcatctccaacgatcaacattggatttttgaaggaagaattcgtgtgtggttaaggtaacgttgttcctcttctttt 11315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 37418860 - 37418808
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 204  Q
    |||||||||||||| ||||| | |||||||||| |||||||||||||||||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcc 37418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 44709730 - 44709666
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||| | ||||||||||| ||||||||||||||||||    
T  44709730 tgttgtgttgtcttgtacacgtgtcaacaagacatccacgtgtacaaggactaaattgatggaaa 44709666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 361443 - 361558
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 249  Q
    |||||||||||||||| ||||||| |||||||||| |  ||||||||| || ||||  ||||    ||||||||||| |||||  |||||| ||  ||||    
T  361443 aagagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacg 361542  T
Q  250 tccatcaatttcgtcc 265  Q
    ||||||||||| ||||    
T  361543 tccatcaatttagtcc 361558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 14387386 - 14387438
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||    
T  14387386 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 14389069 - 14389005
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  ||||||||||||| ||||||| ||||||||||    
T  14389069 tgttgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaacttgatggaaa 14389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 15373979 - 15373887
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || ||||||||||| |||  |||||||||||||||| ||  ||||   |||||||||||  || | ||||||||||||    
T  15373979 gagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgtt 15373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 17946253 - 17946317
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||| ||  |||||| ||| |||||||||| ||||||||||||||||||    
T  17946253 tgttgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 17946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 38150066 - 38150026
Alignment:
Q  191 ggccaaattcgtccccaaatttaacgaaatatcaaaatagt 231  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  38150066 ggccaaattcgtccctcaatttaacgaaatatcaaaatagt 38150026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 39664855 - 39664803
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||||||||||| ||||| |||||||||| |  ||||||||||||||    
T  39664855 tcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattt 39664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 16764690 - 16764611
Alignment:
Q  162 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||| ||||||| |||||||| ||   |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 25619661 - 25619751
Alignment:
Q  153 agtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||| |||||| ||||||| |||||||| | ||||||| ||||||| ||||  ||||   | |||||||||  ||||||||||||||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 25619751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 6797669 - 6797726
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||    
T  6797669 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 6797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 7745363 - 7745290
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    |||||||||||||||||||||  |||||||  | |  || |||||| ||||||||||||||  |||||||||||    
T  7745363 gagtgaatcatcaatttcgtcattgaatttgtaagcatcagccaaaatcgtccccaaattttgcgaaatatcaa 7745290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 15432328 - 15432433
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||  ||| |||||||| | ||||||| ||||||| ||||  ||||   |||||||||||  ||||| ||||||||||  ||||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtc 15432427  T
Q  252 catcaa 257  Q
    ||||||    
T  15432428 catcaa 15432433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 19908228 - 19908167
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||| ||||||||||    
T  19908228 tgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgatggaaa 19908167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 7744202 - 7744262
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    |||||||||| | ||||||| ||  |||||| ||||||||||||||  |||||||||||||    
T  7744202 tgttgtgttgtcatgtacacatgtcaaaaaggaagccacgtgtacaatgactaaattgatg 7744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 11315322 - 11315258
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || ||| ||||||| |||||| |||| || ||||||||||    
T  11315322 tgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgatggaaa 11315258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 16763234 - 16763294
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    |||||| ||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||    
T  16763234 tgttgttttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 16763294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 17696365 - 17696429
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  ||||| ||||||| ||||||||||||||||||    
T  17696365 tgttgtgttgtcctgtacacgtgtcaacaaggcagccatgtgtacaaggactaaattgatggaaa 17696429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 24205635 - 24205687
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  24205635 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 4e-89; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 152 - 360
Target Start/End: Complemental strand, 40020759 - 40020549
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 40020660  T
Q  252 catcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 349  Q
    |||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40020659 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaaaccacgtgtacagggactaaattgatgg 40020560  T
Q  350 aaaatacgaaa 360  Q
    |||||||||||    
T  40020559 aaaatacgaaa 40020549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 409 - 604
Target Start/End: Complemental strand, 40020500 - 40020305
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40020500 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtctctgtctgttcttcttccctccattttcacttctccaag 40020401  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| | |||||||||||    
T  40020400 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtttgttttgaaggtaactttgttcatcttcttctcctttttctctg 40020305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 160 - 360
Target Start/End: Complemental strand, 28433832 - 28433630
Alignment:
Q  160 catcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatt 259  Q
    ||||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28433832 catcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatt 28433733  T
Q  260 tcgt-cctccatccaaaagg-tccttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaatacg 357  Q
    |||| ||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28433732 tcgtccctccgtccaaaaggttcgttagtttgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaatacg 28433633  T
Q  358 aaa 360  Q
    |||    
T  28433632 aaa 28433630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 409 - 602
Target Start/End: Complemental strand, 28433580 - 28433387
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  28433580 acccctatgtttcccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatctattcttcttccctccattttcacttctccaag 28433481  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctc 602  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| | |||||||||    
T  28433480 atcatcatcctctccggcgatcaagcttgcatttttgaaagaagatttcgtctgttttgaaggtaacttcattcatcttcttctcctttttctc 28433387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 23811656 - 23811565
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||| ||| ||||| ||||||||||||||  || || |||||||||||||||||| ||||| || ||||||||||||||||| |||||||||    
T  23811656 gagtaaattatcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgt 23811565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 31201267 - 31201162
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||||   |||||||||||  || ||||||||||| |  ||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 31201168  T
Q  252 catcaa 257  Q
    ||||||    
T  31201167 catcaa 31201162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 9184383 - 9184474
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||||||||||| ||||||| || |  ||||||||||||||| || || |   |||||||||||| ||||||||||||||||    
T  9184383 gagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgt 9184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 5075363 - 5075473
Alignment:
Q  147 aaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttg 246  Q
    ||||||||||||||||||| ||||||| ||||||| || |  || |||||| ||||||||||||||  |||||||||||  | |||| ||||||| | |     
T  5075363 aaaaagagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaatttctctc 5075462  T
Q  247 acgtccatcaa 257  Q
    |||||||||||    
T  5075463 acgtccatcaa 5075473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 31199485 - 31199577
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||||||||||||  ||||    ||||||||||  || ||||||||||||||    
T  31199485 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgtt 31199577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 31823567 - 31823475
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||  || ||||| ||||||||    
T  31823567 gagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgtt 31823475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 33748332 - 33748384
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtcc 204  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcc 33748384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 44620761 - 44620669
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||||||||| ||||||||||||||| || |  |||| |||| ||||||||||||||  | |||||||||  | ||||||||||||||    
T  44620761 agagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgt 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 9186736 - 9186646
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttg 242  Q
    |||||||||||||| | ||||| ||||||| || || || |||||| |||||||||||||   |||||||||||| |||||||| ||||||    
T  9186736 gagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttg 9186646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 42897898 - 42897793
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| | ||||| |||||||| | ||||||||||||||||||||  ||||    ||||||||||  |||||| |||||||||  ||||||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 42897799  T
Q  252 catcaa 257  Q
    ||||||    
T  42897798 catcaa 42897793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 5036608 - 5036672
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  5036608 tgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 5036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 40019156 - 40019248
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| ||||||  |||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40019248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 13108319 - 13108258
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  13108319 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 13108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 27691191 - 27691284
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| | ||| ||||| ||||||||||||    
T  27691191 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtcc 27691284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 38547389 - 38547450
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  38547389 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 38547450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 42894775 - 42894868
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| |||||||||| || |||  |||||||||| |||||| |||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  42894775 agagcgaatcatcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 42894868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 461181 - 461229
Alignment:
Q  157 aatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  461181 aatcatcaacttcgtccttgaattttcacgggtcggccaaattcatccc 461229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 24526896 - 24526988
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||| ||||||| | ||||||||||||||| || ||||||||||| ||||||||  ||||    ||||||||||  || ||||||||||||||    
T  24526896 gagtaaatcatccacttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgtt 24526988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 29239239 - 29239187
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| |||||||| ||||||  |||||||||||| ||||||||||||||    
T  29239239 tcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 32824362 - 32824270
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || ||  ||||||||||| |||||||||||||| |||||  ||||   |||||||||||  || || |||||||||||    
T  32824362 gagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgtt 32824270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 33762765 - 33762713
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||| ||||||||||||| ||||||||||||||    
T  33762765 tcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 1320617 - 1320719
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| || |||| | |||||||| |||||||| |||||| ||||  ||||   | |||||||||  ||||||||||||||||  ||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtc 1320716  T
Q  252 cat 254  Q
    |||    
T  1320717 cat 1320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 12515125 - 12515175
Alignment:
Q  193 ccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||  ||||| ||||||||||||||| ||||||||| ||||||||||    
T  12515125 ccaaatttatcccctaatttaacgaaatattaaaatagtctctgaatttgt 12515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 33160273 - 33160167
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||| || |||||| ||||||| ||||||||||  |||||||||||||| ||||  ||||    ||||||||||  ||||| ||||||||||  ||||     
T  33160273 agagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgc 33160174  T
Q  251 ccatcaa 257  Q
    |||||||    
T  33160173 ccatcaa 33160167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 8609770 - 8609709
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||   | |||  ||||||||||||| ||||||||||||||||||    
T  8609770 tgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgatggaaa 8609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 31821418 - 31821523
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||  ||||| ||||||||||||||||||   ||||| ||| ||||||||  ||||   |||||||||||  ||||||| |||||| |  ||||||    
T  31821418 gagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtc 31821517  T
Q  252 catcaa 257  Q
    ||||||    
T  31821518 catcaa 31821523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 601756 - 601704
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  601756 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9673150 - 9673086
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  ||||||||||||| ||||||| ||||||||||    
T  9673150 tgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgatggaaa 9673086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 13486084 - 13486020
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  || |||||||||| ||||||||||||||||||    
T  13486084 tgttgtgttgccctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 13486020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 33707243 - 33707295
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||| ||| ||||||||  ||||| ||||||||||||| ||||||||||||||    
T  33707243 tcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 42897736 - 42897680
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  42897736 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 42897680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 4e-83; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 409 - 601
Target Start/End: Complemental strand, 42620628 - 42620436
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  42620628 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatttgttcttcttccctccattttcacttctccaag 42620529  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttct 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  42620528 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttct 42620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 151 - 360
Target Start/End: Complemental strand, 42620888 - 42620677
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    ||||| || |||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  42620888 agagtcaaccatcaatttcatcccggaattttcaggggtcggccaaattcgtcccccaatttaaccaaatatcaaaatagtctctgaatttgtttgacgt 42620789  T
Q  251 ccatcaatttcgt-cctccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||||||| | ||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42620788 ccatcaatttcatccctccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtatagggactaaattgatg 42620689  T
Q  349 gaaaatacgaaa 360  Q
    ||||||||||||    
T  42620688 gaaaatacgaaa 42620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 1344913 - 1344814
Alignment:
Q  144 ataaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||| |||||||||||||||||||||||||||||||| || |  |||| |||||| |||||| ||||| |||||||||||||||||||| |||||||||    
T  1344913 ataaataagagtgaatcatcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgt 1344814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 38596868 - 38596973
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||| | ||||||||||||||||||||  ||||   |||||||||||  ||||||||||||||||| ||||||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtc 38596967  T
Q  252 catcaa 257  Q
    ||||||    
T  38596968 catcaa 38596973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 40330606 - 40330514
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| |||||||  ||||   |||||||||||  || ||||||||||||||    
T  40330606 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40330514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 18728727 - 18728621
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| |||||| ||||||||||||||||||   ||||||||| ||||||||  ||||   |||||||||||  ||||||||||||||||  |||||    
T  18728727 agagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 18728628  T
Q  251 ccatcaa 257  Q
    |||||||    
T  18728627 ccatcaa 18728621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 32835876 - 32835965
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||  ||||   |||||||||||  || |||||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 32090016 - 32089924
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 32089924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 35395332 - 35395438
Alignment:
Q  151 agagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 250  Q
    |||||||| |||||| ||| ||||||||||||||   ||||||||| ||||||||  ||||   |||||||||||  |||| |||||||||||| |||||    
T  35395332 agagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgt 35395431  T
Q  251 ccatcaa 257  Q
    |||||||    
T  35395432 ccatcaa 35395438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 33257851 - 33257759
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||| |||||||| |||||||||||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  33257851 gagtggatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 33257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 42619289 - 42619381
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||  ||||   |||||||||||  || |||| |||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgtt 42619381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 43318184 - 43318082
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||| | |||||||||||| || ||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 43318085  T
Q  252 cat 254  Q
    |||    
T  43318084 cat 43318082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 35291048 - 35291101
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||| ||||    
T  35291048 gagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccc 35291101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 38176647 - 38176724
Alignment:
Q  167 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 38203871 - 38203948
Alignment:
Q  167 ttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||||| |||| |||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 7268004 - 7268065
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  7268004 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 7268065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 17574479 - 17574540
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  17574479 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 17574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 32087514 - 32087619
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| |||||||||||||||||| | ||||  ||| ||||||||  ||||   |||||||||||  |||||||| ||||| |  ||||||    
T  32087514 gagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtc 32087613  T
Q  252 catcaa 257  Q
    ||||||    
T  32087614 catcaa 32087619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 18726565 - 18726657
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||| | ||||   |||| ||||||||  ||||   |||||||||||  |||||||| ||||||||    
T  18726565 gagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgtt 18726657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 24541299 - 24541206
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc--gtcctccatccaaaaggtc 280  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |||   |||||| |||||||||||    
T  24541299 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcatctcctccgtccaaaaggtc 24541206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 38178217 - 38178112
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||  ||||| ||||||| | |||||||| ||||||| ||||||| ||||  ||||   |||||||||||  ||||  ||||||||||  ||||||    
T  38178217 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38178118  T
Q  252 catcaa 257  Q
    ||||||    
T  38178117 catcaa 38178112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 38205441 - 38205336
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||  ||||| ||||||| | |||||||| ||||||| ||||||| ||||  ||||   |||||||||||  ||||  ||||||||||  ||||||    
T  38205441 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38205342  T
Q  252 catcaa 257  Q
    ||||||    
T  38205341 catcaa 38205336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 1343264 - 1343312
Alignment:
Q  195 aaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||  |||||||| ||||||||||||||||  |||||||||    
T  1343264 aaattcgtcccttaatttaacaaaatatcaaaatagtctttgaatttgt 1343312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 8539834 - 8539898
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  |||||||||| || ||||||||||||||||||    
T  8539834 tgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtgcaaggactaaattgatggaaa 8539898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 18728564 - 18728508
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||||||||| || ||| |||||||||||  ||||||||| |||||    
T  18728564 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttaagggactaatttgat 18728508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 27349337 - 27349369
Alignment:
Q  320 aagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||||||| ||||||||||||||||||    
T  27349337 aagccacgtgtacaaggactaaattgatggaaa 27349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 29621868 - 29621816
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  29621868 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29621816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 32087676 - 32087732
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    ||||||| ||||||| ||||| || ||| ||||||||||| |||||||||| |||||    
T  32087676 tgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 32087732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 34327794 - 34327858
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||| |||| | ||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  34327794 tgttgcgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 35292347 - 35292287
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||| || ||||||||||||| |||||| |||| |||||| || ||||||| ||||||    
T  35292347 tgttgtgctgtcttgtacacgtggcaaaaaggaagctacgtgttcaaggactaatttgatg 35292287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 40782263 - 40782211
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  40782263 tcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 42473694 - 42473642
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  ||||   |||||||||||||||||||||||||||    
T  42473694 tcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 42473642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 43318025 - 43317965
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 348  Q
    ||||||| || |||||||| |||| |||||| ||||||||||| || ||||||| ||||||    
T  43318025 tgttgtgctgtcttgtacatgtggcaaaaaggaagccacgtgttcaaggactaatttgatg 43317965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 150 - 360
Target Start/End: Original strand, 41944574 - 41944784
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacg 249  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  41944574 aagagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttttttgacg 41944673  T
Q  250 tccatcaatttcgtcc-tccatccaaaaggtcc-ttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    || |  |||||||||| ||| | |||||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41944674 tcga--aatttcgtccttccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccgcgtgtacagggactaaattgat 41944771  T
Q  348 ggaaaatacgaaa 360  Q
    |||||||||||||    
T  41944772 ggaaaatacgaaa 41944784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 409 - 604
Target Start/End: Original strand, 41944833 - 41945028
Alignment:
Q  409 acccctgtgtttgccattactatacatcctcatatttcatacataacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 508  Q
    |||||| ||||| ||||||| ||| ||||||| |||| ||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  41944833 acccctatgttttccattaccataaatcctcacattttatacagaacacatcaactaagtccctgtctttttttcttccctccattttcacttctccaag 41944932  T
Q  509 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttttactttttctctg 604  Q
    |||||||| ||||| || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  41944933 atcatcattctctctggtgatcaagcttgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 41945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 40963489 - 40963398
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||| ||||||||||||||| || |  |||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  40963489 gagtgaatcatcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgt 40963398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 23774152 - 23774257
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||||| | ||||||||||||||||||  ||||   |||||||||||  ||||||||||||||||  ||||||    
T  23774152 gagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtc 23774251  T
Q  252 catcaa 257  Q
    ||||||    
T  23774252 catcaa 23774257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 48635464 - 48635372
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 48635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 601
Target Start/End: Complemental strand, 26449052 - 26448941
Alignment:
Q  490 ccattttcacttctccaagatcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttct 589  Q
    |||| ||||| ||||||| ||||||||| |||||||| |||||| ||| ||||||||||||||| |||||||||  | |||||||| || ||| |||||     
T  26449052 ccatcttcacctctccaaaatcatcatcatctccggcaatcaaggttggatttttgaaggaagaattcgtatgtggttaaggtaacgtcattcctcttcc 26448953  T
Q  590 tttactttttct 601  Q
    ||| ||||||||    
T  26448952 ttttctttttct 26448941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 40509035 - 40508930
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||  ||||   |||||||||||  || ||| |||||||||  ||||||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtc 40508936  T
Q  252 catcaa 257  Q
    ||||||    
T  40508935 catcaa 40508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 48633877 - 48633982
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||||| ||||||| |||||||||||   ||||   |||||||||||  ||||||||||||||||  ||||||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 48633976  T
Q  252 catcaa 257  Q
    ||||||    
T  48633977 catcaa 48633982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 40508493 - 40508585
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||  ||||   |||||| ||||  || ||||||||||||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgtt 40508585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 41946190 - 41946099
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||| |||||||||||| || ||||||||| ||  | |||| |||||| |||||  |||||||||||||||||||||||||| |||||||||    
T  41946190 gagtaaatcatcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgt 41946099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 45897048 - 45897142
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||| ||||||| |||||||| | ||||||||||| ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  45897048 aagagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 45897142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 30501155 - 30501208
Alignment:
Q  190 cggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  30501155 cggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgt 30501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 23887194 - 23887290
Alignment:
Q  148 aaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||||| ||||||| |||||||| | |||||||| || ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  23887194 aaaagagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 23887290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 33111841 - 33111933
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| |||||||||||||||||| || |||| ||||||| ||||  ||||   |||||||||||  || ||||||||||||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgtt 33111933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 33850982 - 33851074
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||| ||||||||  ||||   |||||||||||  || || |||||||||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgtt 33851074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 26447723 - 26447814
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||| ||||||||| ||||| || |  |||| ||||||||| ||  | ||||| ||||||||||||||||| ||||||||||    
T  26447723 gagtgaatcatcaacttcgtccctaaatttgcacgaatcggtcaaattcgttcctcattttaatgaaatatcaaaatagtctctgaatttgt 26447814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 41021133 - 41021022
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgttt 245  Q
    |||| |||||||| |||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||      
T  41021133 aaaatagagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 41021034  T
Q  246 gacgtccatcaa 257  Q
    ||||||||||||    
T  41021033 gacgtccatcaa 41021022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 23888896 - 23888791
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||||||||||||||   ||||||||| ||||||||  ||||   ||||||||||   ||||||||||||||||   |||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtc 23888797  T
Q  252 catcaa 257  Q
    ||||||    
T  23888796 catcaa 23888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 1847736 - 1847644
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 244  Q
    |||||||||||||| || |||| |||||||||| ||||||||||||||| ||||  ||||   | |||||||||  || ||||||||||||||    
T  1847736 gagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgtt 1847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 53190745 - 53190681
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  53190745 tgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 53190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 2226135 - 2226074
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  2226135 tgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgatggaaa 2226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 18430395 - 18430294
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||| |||||||| | ||||| ||||||||| ||||  ||||   |||||||||||  |||||||||||| |||  ||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtc 18430296  T
Q  252 ca 253  Q
    ||    
T  18430295 ca 18430294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 33113304 - 33113199
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| || |||| |||||||| | |||||||||||| || ||||  ||||   |||||||||||  |||||||| |||||||  ||||||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtc 33113205  T
Q  252 catcaa 257  Q
    ||||||    
T  33113204 catcaa 33113199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 45257347 - 45257242
Alignment:
Q  149 aaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgac 248  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||||| ||||  ||||     |||||||||  |||| |||||||||||  |||    
T  45257347 aaagagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagac 45257248  T
Q  249 gtccat 254  Q
    ||||||    
T  45257247 gtccat 45257242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 17515469 - 17515533
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||| ||  || |||  ||||||||||||| ||||||||||||||||||    
T  17515469 tgttgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 17515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 23293155 - 23293091
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  23293155 tgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 23293091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 33113135 - 33113083
Alignment:
Q  299 cttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaa 351  Q
    ||||||||||||| |||||| ||||||||||| || ||||||| |||||||||    
T  33113135 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgatggaa 33113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 41977908 - 41977972
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  || |||||||||| ||||||||||||||||||    
T  41977908 tgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 41977972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 44276181 - 44276117
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||| | | ||||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  44276181 tgttgtgtcgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaa 44276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 54898595 - 54898659
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||| |||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  54898595 tgttgcgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 54898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 18428747 - 18428822
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 225  Q
    ||||| |||||||||| |||||||||||||||| | ||||||| ||| ||||||||  ||||   |||||||||||    
T  18428747 aagagggaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 18428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 51454374 - 51454283
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    ||||||| |||||| ||||||| |||||||||| || |||||||||||| | ||  ||||   |||||||||||| |||||  |||||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 35905692 - 35905634
Alignment:
Q  294 gttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||| ||||||||||||  || |||  ||||||||||||| ||||||||||||||||||    
T  35905692 gttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 35905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 2977453 - 2977348
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    |||||||||||||| ||||||| |||||||| | |  |||||||||||| ||||  ||||   |||||||||||   ||||||| |||||||   |||||    
T  2977453 gagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtc 2977354  T
Q  252 catcaa 257  Q
    ||||||    
T  2977353 catcaa 2977348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 3152325 - 3152232
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| ||| ||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| | ||| ||||| ||||||||||||    
T  3152325 tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtcc 3152232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 30599900 - 30599839
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||| ||  || |||  ||||||||||||| ||||||||||||||||||    
T  30599900 tgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 30599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 33051558 - 33051465
Alignment:
Q  150 aagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgt 243  Q
    |||||||||||||||| ||||||||| ||||| || |  ||  ||||| ||||||| ||||||  | |||||||||  | ||||||||||||||    
T  33051558 aagagtgaatcatcaacttcgtccctaaatttgcaagcatcaaccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgt 33051465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 44794244 - 44794337
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| ||| ||||  |||||  |||||||||||| ||||||||||||||    || ||||||||| ||||| ||||| ||||||||||||    
T  44794244 tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtcc 44794337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 45898472 - 45898367
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 251  Q
    ||||||| |||||| ||||||||||||||||||   |||| |||| || |||||  ||||   |||||||||||  |||||| |||||||||  ||||||    
T  45898472 gagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 45898373  T
Q  252 catcaa 257  Q
     |||||    
T  45898372 tatcaa 45898367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 48634039 - 48634099
Alignment:
Q  286 tgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 347  Q
    |||||||| ||| ||||||||||||| |||||| ||||||||||| || ||||||| |||||    
T  48634039 tgtgttgt-ttgtcttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgat 48634099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 2660253 - 2660341
Alignment:
Q  193 ccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtc 280  Q
    |||| ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| ||||| ||||| |||||||||||    
T  2660253 ccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtc 2660341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 7884859 - 7884795
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| ||||||||||||  || |||  |||||| |||| | ||||||||||||||||||    
T  7884859 tgttgtgttgtcttgtacacgtgtcaacaaggcagccacatgtataaggactaaattgatggaaa 7884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 38193562 - 38193510
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  38193562 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 41977787 - 41977839
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||||| ||||||  |||||  |||||||||||| ||||||||||||||    
T  41977787 tcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 41979404 - 41979352
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  41979404 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 43765296 - 43765360
Alignment:
Q  288 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    |||||||||| | ||||||||||  || |||  |||||||||||||  |||||||||||||||||    
T  43765296 tgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaatgactaaattgatggaaa 43765360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 46308844 - 46308896
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  46308844 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 53094325 - 53094273
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaattt 241  Q
    |||||||| ||||||||  |||||  |||||||||||| ||||||||||||||    
T  53094325 tcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 6758 - 6705
Alignment:
Q  152 gagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 205  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccc 6705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 38375 - 38297
Alignment:
Q  146 aaaaaagagtgaatcatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatca 224  Q
    |||||||||||||||||||| ||||||||||||||| || |  ||  ||||| ||||||||||||||  ||||||||||    
T  38375 aaaaaagagtgaatcatcaacttcgtccctgaatttgcaagcatcaaccaaaatcgtccccaaattttgcgaaatatca 38297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 3331 - 3424
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| || |||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| ||||| ||||| ||||||||||||    
T  3331 tcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtcc 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 4503 - 4596
Alignment:
Q  189 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgt-cctccatccaaaaggtcc 281  Q
    |||||||| || |||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| ||||| ||||| ||||||||||||    
T  4503 tcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtcc 4596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 1424 - 1485
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  | ||||||||||| ||||||||||||||||||    
T  1424 tgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggactaaattgatggaaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 8422 - 8483
Alignment:
Q  291 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 352  Q
    ||||||| ||||||||||||  || |||  ||||||||||||| | ||||||||||||||||    
T  8422 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaagtactaaattgatggaaa 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University