View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19253_high_5 (Length: 324)

Name: NF19253_high_5
Description: NF19253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19253_high_5
NF19253_high_5
[»] chr1 (58 HSPs)
chr1 (16-308)||(45233933-45234216)
chr1 (173-283)||(7274015-7274124)
chr1 (172-272)||(43029488-43029587)
chr1 (171-282)||(36602672-36602783)
chr1 (238-284)||(14737780-14737826)
chr1 (238-282)||(49517019-49517063)
chr1 (240-283)||(26184702-26184745)
chr1 (173-272)||(30259574-30259673)
chr1 (173-268)||(44236622-44236717)
chr1 (238-276)||(36641824-36641862)
chr1 (177-283)||(40304130-40304236)
chr1 (185-272)||(4338543-4338632)
chr1 (238-283)||(15360843-15360888)
chr1 (246-283)||(28467383-28467420)
chr1 (172-281)||(29794001-29794109)
chr1 (180-265)||(30458126-30458211)
chr1 (240-277)||(44251369-44251406)
chr1 (238-283)||(44936666-44936711)
chr1 (198-283)||(45107532-45107616)
chr1 (238-283)||(45804226-45804271)
chr1 (171-283)||(17269133-17269244)
chr1 (240-284)||(42351981-42352025)
chr1 (213-280)||(48282057-48282125)
chr1 (213-273)||(49557065-49557125)
chr1 (240-284)||(50319243-50319287)
chr1 (240-283)||(7218150-7218193)
chr1 (240-283)||(17628550-17628593)
chr1 (173-284)||(38651484-38651595)
chr1 (240-279)||(46499934-46499973)
chr1 (176-226)||(24153164-24153214)
chr1 (199-281)||(43372037-43372119)
chr1 (238-283)||(4200178-4200223)
chr1 (225-274)||(4549802-4549851)
chr1 (238-279)||(8795065-8795106)
chr1 (203-272)||(10854647-10854716)
chr1 (238-283)||(11211067-11211112)
chr1 (171-272)||(23895218-23895319)
chr1 (242-283)||(27738256-27738297)
chr1 (172-205)||(28075669-28075702)
chr1 (238-283)||(29007792-29007837)
chr1 (242-283)||(30815711-30815752)
chr1 (172-221)||(35590983-35591032)
chr1 (242-283)||(44032075-44032116)
chr1 (238-283)||(48830152-48830197)
chr1 (172-229)||(49365918-49365975)
chr1 (239-280)||(52559907-52559948)
chr1 (211-271)||(4202217-4202277)
chr1 (240-284)||(6976899-6976943)
chr1 (240-272)||(7200929-7200961)
chr1 (239-283)||(9656600-9656644)
chr1 (240-284)||(26293181-26293225)
chr1 (240-280)||(36151584-36151624)
chr1 (215-271)||(42336588-42336644)
chr1 (239-279)||(47002954-47002994)
chr1 (239-283)||(47877072-47877116)
chr1 (208-284)||(48748658-48748733)
chr1 (238-270)||(49692139-49692171)
chr1 (187-283)||(50998450-50998546)
[»] scaffold0590 (1 HSPs)
scaffold0590 (174-283)||(1150-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (174-283)||(2716-2825)
[»] chr8 (50 HSPs)
chr8 (172-283)||(4558681-4558792)
chr8 (171-272)||(29699136-29699237)
chr8 (171-284)||(43907874-43907987)
chr8 (186-278)||(8799302-8799394)
chr8 (172-279)||(14482085-14482192)
chr8 (176-284)||(34563137-34563245)
chr8 (205-283)||(11494069-11494147)
chr8 (199-283)||(3645892-3645976)
chr8 (240-283)||(1470932-1470975)
chr8 (172-283)||(7026614-7026725)
chr8 (242-283)||(29262950-29262991)
chr8 (231-283)||(27728097-27728149)
chr8 (171-263)||(31884476-31884568)
chr8 (172-284)||(40280280-40280392)
chr8 (188-283)||(787182-787277)
chr8 (177-272)||(39392748-39392843)
chr8 (172-274)||(2364558-2364660)
chr8 (170-283)||(10722512-10722625)
chr8 (171-281)||(10727079-10727189)
chr8 (238-279)||(26820148-26820189)
chr8 (240-284)||(36643946-36643990)
chr8 (172-274)||(7008512-7008612)
chr8 (240-283)||(25867037-25867080)
chr8 (177-279)||(26716518-26716618)
chr8 (240-279)||(28784875-28784914)
chr8 (240-279)||(31315533-31315572)
chr8 (213-272)||(35534948-35535007)
chr8 (172-283)||(41336721-41336832)
chr8 (223-281)||(1112787-1112845)
chr8 (172-278)||(27320199-27320304)
chr8 (246-284)||(40357856-40357894)
chr8 (238-272)||(40728505-40728539)
chr8 (213-283)||(41620367-41620437)
chr8 (240-282)||(42597352-42597394)
chr8 (189-262)||(1433445-1433518)
chr8 (242-283)||(2100758-2100799)
chr8 (190-283)||(5071043-5071136)
chr8 (238-283)||(12224975-12225020)
chr8 (238-283)||(12361141-12361186)
chr8 (238-279)||(38561675-38561716)
chr8 (172-221)||(40279719-40279768)
chr8 (241-273)||(2093231-2093263)
chr8 (240-272)||(6918266-6918298)
chr8 (171-267)||(7714124-7714220)
chr8 (240-280)||(11000640-11000680)
chr8 (240-272)||(11119086-11119118)
chr8 (240-284)||(14929191-14929235)
chr8 (240-280)||(26215447-26215487)
chr8 (172-280)||(28769418-28769526)
chr8 (240-272)||(40356822-40356854)
[»] chr5 (40 HSPs)
chr5 (178-284)||(37611268-37611372)
chr5 (178-284)||(37787998-37788102)
chr5 (175-283)||(35135738-35135846)
chr5 (172-272)||(37618926-37619026)
chr5 (172-272)||(39257473-39257573)
chr5 (172-271)||(20982223-20982322)
chr5 (172-266)||(26516181-26516275)
chr5 (173-283)||(37063150-37063260)
chr5 (172-270)||(29115302-29115400)
chr5 (171-271)||(18704124-18704224)
chr5 (179-283)||(34690764-34690868)
chr5 (199-282)||(6738484-6738567)
chr5 (240-282)||(10303752-10303794)
chr5 (240-278)||(35960365-35960403)
chr5 (223-284)||(7096202-7096263)
chr5 (231-272)||(29117017-29117058)
chr5 (242-279)||(32969197-32969234)
chr5 (178-283)||(35963137-35963242)
chr5 (202-279)||(40097483-40097560)
chr5 (172-272)||(6739755-6739855)
chr5 (240-283)||(14295457-14295500)
chr5 (240-283)||(28586842-28586885)
chr5 (252-283)||(38047931-38047962)
chr5 (231-281)||(985575-985625)
chr5 (240-282)||(10363701-10363743)
chr5 (210-280)||(17756808-17756878)
chr5 (240-274)||(35095868-35095902)
chr5 (240-282)||(40097160-40097202)
chr5 (239-268)||(1943201-1943230)
chr5 (243-284)||(4948609-4948650)
chr5 (242-283)||(12595816-12595857)
chr5 (223-280)||(40048359-40048416)
chr5 (213-270)||(40499764-40499821)
chr5 (241-277)||(6593252-6593288)
chr5 (240-268)||(11054137-11054165)
chr5 (240-284)||(12242763-12242807)
chr5 (240-276)||(29590823-29590859)
chr5 (238-282)||(38766920-38766964)
chr5 (239-283)||(39823197-39823241)
chr5 (172-284)||(41052773-41052885)
[»] chr2 (41 HSPs)
chr2 (176-277)||(31461325-31461426)
chr2 (178-269)||(37845442-37845533)
chr2 (172-274)||(11393451-11393553)
chr2 (172-274)||(11410112-11410214)
chr2 (186-280)||(35459807-35459901)
chr2 (177-272)||(28803593-28803688)
chr2 (172-271)||(33197327-33197426)
chr2 (172-283)||(18884764-18884876)
chr2 (186-274)||(35252207-35252295)
chr2 (172-279)||(3102576-3102683)
chr2 (172-271)||(4550660-4550759)
chr2 (240-283)||(17952777-17952820)
chr2 (242-280)||(6988068-6988106)
chr2 (238-283)||(1939408-1939453)
chr2 (210-283)||(3673728-3673801)
chr2 (223-280)||(25609730-25609787)
chr2 (240-289)||(32098378-32098427)
chr2 (207-284)||(37033962-37034039)
chr2 (223-283)||(5511499-5511559)
chr2 (172-268)||(5942808-5942904)
chr2 (187-267)||(11393747-11393827)
chr2 (187-267)||(11410408-11410488)
chr2 (238-286)||(29633021-29633069)
chr2 (252-283)||(3423844-3423875)
chr2 (240-283)||(11344360-11344403)
chr2 (213-272)||(27288557-27288616)
chr2 (240-283)||(31740035-31740078)
chr2 (240-283)||(40837504-40837547)
chr2 (213-283)||(10150679-10150749)
chr2 (174-220)||(17775520-17775566)
chr2 (212-283)||(31228893-31228966)
chr2 (238-284)||(40672871-40672917)
chr2 (185-271)||(42817464-42817550)
chr2 (172-282)||(42974235-42974345)
chr2 (238-271)||(750098-750131)
chr2 (238-283)||(3458606-3458651)
chr2 (187-268)||(9875548-9875629)
chr2 (223-272)||(10143106-10143155)
chr2 (252-280)||(10646368-10646396)
chr2 (177-209)||(13736443-13736475)
chr2 (252-280)||(34339869-34339897)
[»] chr6 (42 HSPs)
chr6 (172-272)||(5328857-5328957)
chr6 (199-272)||(2514612-2514685)
chr6 (178-283)||(10452436-10452541)
chr6 (203-272)||(8420284-8420353)
chr6 (242-283)||(27595643-27595684)
chr6 (191-283)||(32386639-32386731)
chr6 (240-283)||(10749304-10749347)
chr6 (212-283)||(27889920-27889990)
chr6 (210-283)||(4325384-4325457)
chr6 (242-283)||(27693515-27693556)
chr6 (186-266)||(19800523-19800603)
chr6 (210-270)||(30523858-30523918)
chr6 (208-283)||(10154140-10154215)
chr6 (213-283)||(3217266-3217336)
chr6 (238-280)||(24836278-24836320)
chr6 (172-283)||(27615349-27615457)
chr6 (172-272)||(2027891-2027991)
chr6 (188-275)||(6647288-6647373)
chr6 (172-272)||(9027460-9027560)
chr6 (213-273)||(28531627-28531687)
chr6 (188-268)||(32386190-32386270)
chr6 (176-272)||(32975865-32975961)
chr6 (240-284)||(32980492-32980536)
chr6 (240-283)||(1402947-1402990)
chr6 (240-283)||(2027482-2027525)
chr6 (216-283)||(5550059-5550126)
chr6 (199-282)||(9732386-9732469)
chr6 (240-283)||(29274305-29274348)
chr6 (240-279)||(34405056-34405095)
chr6 (190-269)||(34429780-34429859)
chr6 (223-283)||(323745-323805)
chr6 (172-271)||(740953-741055)
chr6 (240-268)||(781336-781364)
chr6 (240-284)||(2205643-2205687)
chr6 (172-272)||(3155059-3155159)
chr6 (243-283)||(3204618-3204658)
chr6 (247-283)||(7713983-7714019)
chr6 (243-283)||(11340701-11340741)
chr6 (242-282)||(29940749-29940789)
chr6 (242-282)||(30784510-30784550)
chr6 (240-272)||(30865433-30865465)
chr6 (240-284)||(31583652-31583696)
[»] chr3 (43 HSPs)
chr3 (172-272)||(54775011-54775111)
chr3 (176-283)||(21862251-21862359)
chr3 (172-284)||(39971202-39971314)
chr3 (240-283)||(1395622-1395665)
chr3 (176-283)||(32703025-32703132)
chr3 (242-283)||(25195377-25195418)
chr3 (212-284)||(16790431-16790503)
chr3 (175-283)||(38462167-38462275)
chr3 (199-271)||(41028939-41029011)
chr3 (199-266)||(16790181-16790248)
chr3 (240-283)||(26990685-26990728)
chr3 (172-283)||(43116504-43116615)
chr3 (172-226)||(20874433-20874487)
chr3 (213-283)||(44374720-44374790)
chr3 (238-283)||(10101552-10101597)
chr3 (238-283)||(10212477-10212522)
chr3 (238-283)||(20143874-20143918)
chr3 (238-283)||(23269271-23269315)
chr3 (238-279)||(48323770-48323811)
chr3 (238-279)||(48397595-48397636)
chr3 (238-283)||(53736189-53736234)
chr3 (211-283)||(27792794-27792866)
chr3 (239-279)||(33882978-33883018)
chr3 (238-282)||(48364956-48365000)
chr3 (171-279)||(49845601-49845708)
chr3 (240-283)||(15304423-15304466)
chr3 (172-272)||(23785136-23785238)
chr3 (213-284)||(32064364-32064435)
chr3 (240-283)||(49586992-49587035)
chr3 (213-283)||(3182438-3182508)
chr3 (242-284)||(6241159-6241201)
chr3 (213-283)||(33307656-33307726)
chr3 (238-283)||(10357382-10357427)
chr3 (246-279)||(23326243-23326276)
chr3 (238-279)||(23952186-23952227)
chr3 (211-284)||(28283652-28283725)
chr3 (211-284)||(40122827-40122900)
chr3 (247-284)||(53457335-53457372)
chr3 (172-208)||(3364926-3364962)
chr3 (238-278)||(24235764-24235804)
chr3 (238-278)||(32069100-32069139)
chr3 (252-280)||(32555060-32555088)
chr3 (240-268)||(35394792-35394820)
[»] chr7 (51 HSPs)
chr7 (172-283)||(12835013-12835124)
chr7 (172-283)||(8680878-8680986)
chr7 (172-279)||(2223032-2223138)
chr7 (172-279)||(49060423-49060530)
chr7 (238-283)||(39591543-39591588)
chr7 (172-272)||(27481381-27481481)
chr7 (172-279)||(5010548-5010655)
chr7 (239-278)||(5269480-5269519)
chr7 (173-264)||(6552365-6552456)
chr7 (240-283)||(27121662-27121705)
chr7 (180-279)||(47003978-47004077)
chr7 (199-273)||(1431394-1431468)
chr7 (172-281)||(22387979-22388091)
chr7 (172-283)||(22759067-22759180)
chr7 (210-283)||(991991-992064)
chr7 (246-283)||(3501042-3501079)
chr7 (172-272)||(753291-753391)
chr7 (213-269)||(5373149-5373205)
chr7 (212-284)||(7244625-7244697)
chr7 (186-278)||(8445183-8445275)
chr7 (215-283)||(24973870-24973938)
chr7 (172-272)||(31341077-31341177)
chr7 (243-283)||(46825052-46825092)
chr7 (239-279)||(48157200-48157240)
chr7 (240-283)||(1417215-1417258)
chr7 (240-283)||(3802215-3802258)
chr7 (240-283)||(28178920-28178963)
chr7 (240-283)||(30456526-30456569)
chr7 (172-283)||(33894507-33894616)
chr7 (240-283)||(35536058-35536101)
chr7 (240-283)||(40689062-40689105)
chr7 (240-279)||(42656466-42656505)
chr7 (236-283)||(47046184-47046231)
chr7 (172-226)||(5499296-5499350)
chr7 (240-273)||(15328557-15328590)
chr7 (238-283)||(23918906-23918951)
chr7 (190-271)||(25511528-25511609)
chr7 (238-279)||(26024072-26024113)
chr7 (186-283)||(26935626-26935723)
chr7 (210-283)||(30751438-30751511)
chr7 (171-272)||(39505839-39505940)
chr7 (240-272)||(2999142-2999174)
chr7 (252-280)||(3635928-3635956)
chr7 (223-279)||(28165025-28165081)
chr7 (172-208)||(28702640-28702676)
chr7 (240-280)||(30496655-30496695)
chr7 (245-281)||(36532307-36532343)
chr7 (172-248)||(36598432-36598508)
chr7 (172-208)||(39362027-39362063)
chr7 (238-278)||(41875868-41875908)
chr7 (211-283)||(45593795-45593867)
[»] chr4 (39 HSPs)
chr4 (176-283)||(5219576-5219683)
chr4 (172-279)||(7749162-7749269)
chr4 (213-283)||(49219063-49219133)
chr4 (240-283)||(4071833-4071876)
chr4 (172-279)||(11785165-11785272)
chr4 (172-283)||(24193468-24193579)
chr4 (172-280)||(485964-486073)
chr4 (172-279)||(23676599-23676707)
chr4 (211-283)||(30024622-30024694)
chr4 (211-289)||(4191661-4191740)
chr4 (236-283)||(11917506-11917553)
chr4 (173-272)||(27671919-27672018)
chr4 (240-282)||(20936079-20936121)
chr4 (240-281)||(1404373-1404414)
chr4 (242-283)||(8130127-8130168)
chr4 (238-283)||(31038943-31038988)
chr4 (231-284)||(35743246-35743299)
chr4 (216-281)||(47970245-47970310)
chr4 (240-284)||(7022619-7022663)
chr4 (240-283)||(9680615-9680658)
chr4 (213-272)||(19422342-19422401)
chr4 (240-283)||(32724070-32724113)
chr4 (212-283)||(36734816-36734887)
chr4 (179-270)||(51555956-51556047)
chr4 (240-283)||(52735073-52735116)
chr4 (240-282)||(7029374-7029416)
chr4 (172-270)||(8422926-8423024)
chr4 (172-262)||(11698846-11698936)
chr4 (213-283)||(22684592-22684662)
chr4 (240-278)||(30770834-30770872)
chr4 (172-234)||(43932316-43932378)
chr4 (213-283)||(54325113-54325183)
chr4 (172-229)||(8469507-8469564)
chr4 (240-284)||(51044533-51044578)
chr4 (172-280)||(4193557-4193665)
chr4 (240-280)||(9843332-9843371)
chr4 (238-282)||(23815319-23815363)
chr4 (240-284)||(24929444-24929488)
chr4 (245-285)||(35533281-35533321)
[»] scaffold0024 (1 HSPs)
scaffold0024 (172-283)||(27459-27570)
[»] scaffold0085 (1 HSPs)
scaffold0085 (246-283)||(34073-34110)
[»] scaffold0100 (1 HSPs)
scaffold0100 (176-264)||(42504-42592)
[»] scaffold0508 (1 HSPs)
scaffold0508 (199-272)||(9862-9935)
[»] scaffold0072 (1 HSPs)
scaffold0072 (181-272)||(4864-4955)
[»] scaffold0015 (1 HSPs)
scaffold0015 (241-283)||(69019-69061)
[»] scaffold0549 (2 HSPs)
scaffold0549 (243-283)||(1800-1840)
scaffold0549 (243-283)||(3890-3930)
[»] scaffold0287 (1 HSPs)
scaffold0287 (252-280)||(10129-10157)
[»] scaffold0060 (1 HSPs)
scaffold0060 (210-278)||(63366-63434)


Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 308
Target Start/End: Original strand, 45233933 - 45234216
Alignment:
Q  16 attgatgcggctgtcgctgcaattgagacataacttttttgccattgcagccacaattacagtcacacaccattttctaaaaccttgttatgcagtattt 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45233933 attgatgcggctgtggctgcaattgagacataacttttttgccattgcagccacaattacagtcacacaccattttctaaaaccttgttatgcagtattt 45234032  T
Q  116 catataatatttatgcaatatgtggaagttagggtatccatgaaagtcattaaggatttggataaacaatttaattaagcacatatagcataaatgttta 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||    
T  45234033 catataatatttatgcaatatgtggaagttagggtatccatgaaagtcattaaggatttggataaacaatttaatta---------agcataaatgttta 45234123  T
Q  216 tcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataatttatatatgctataagctctttt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45234124 tcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataatttatatatgctataagctctttt 45234216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 7274124 - 7274015
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||||||||||| |||||| ||||| |||||||||| || ||||||||| | ||||| |||| ||||||||| ||||| ||||||| |||||||||||||    
T  7274124 ttggataaacaacttaattgagcac-tatagcataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaa 7274026  T
Q  273 ttattttcata 283  Q
    || ||||||||    
T  7274025 ttgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 43029587 - 43029488
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||||||||||||||||||||| | |||||||| || |||| |||||||||||| |||| |   |||||||| || ||||||||||||||| ||||    
T  43029587 tttggataaacaatttaattaagcacttttagcataagtgattat-atatgagtgcttatgtataacctatttctacaacaaaagataaaataaattcaa 43029489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 36602672 - 36602783
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||| |||| | ||||||||||||| |||| ||||||| |||||||||| |||| || |||| | | ||| |||| || || ||||||||||||||||    
T  36602672 atttggttaaatagtttaattaagcacttatatcataaatttttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtca 36602771  T
Q  271 aattattttcat 282  Q
    ||| ||||||||    
T  36602772 aatcattttcat 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 14737826 - 14737780
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  14737826 gttatttctataacaaaagataaaataaagtcaaattgttttcataa 14737780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 49517019 - 49517063
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  49517019 gttatttctataacaaaagataaaataaagtcaaattgttttcat 49517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 26184702 - 26184745
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  26184702 tatttctataagaaaaggtaaaataaagtcaaattattttcata 26184745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 30259673 - 30259574
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||||||||||| ||||| |||||| |||| |||| |   ||||||||  ||||||| || ||| | ||||||||||| |||| ||||||||||||||||    
T  30259673 ttggataaacaacttaataaagcacttataacatacacacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaa 30259574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 44236717 - 44236622
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagt 268  Q
    ||||| |||||| |||||||||||| |||||||||| || |||||| || |||| || |||| | | |||| |||||| ||| |||||||||||||    
T  44236717 ttggacaaacaagttaattaagcacttatagcataagtgcttatcacataagtgtttgtgtagaagctattcctataacaaatgataaaataaagt 44236622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 36641824 - 36641862
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattat 276  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  36641824 gttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 40304236 - 40304130
Alignment:
Q  177 ataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattat 276  Q
    ||||| || |||||||||||| |||||  ||| |||||||||||| | |||||  ||| | | ||||| ||||| ||||||||||||||| ||| ||| |    
T  40304236 ataaaaaacttaattaagcacttatagtgtaagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgt 40304137  T
Q  277 tttcata 283  Q
    |||||||    
T  40304136 tttcata 40304130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 4338543 - 4338632
Alignment:
Q  185 tttaattaagca-catatagcataaatgtttatcatatgagtgcttt-tgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||||||||||| | ||||| |||| |||||||||||| |||||||| |||| | ||||| |||| || | |||||||||||||||||||    
T  4338543 tttaattaagcaacttatagtataagtgtttatcatataagtgctttatgtataagttatgtctagaacagaagataaaataaagtcaaa 4338632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 15360843 - 15360888
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||    
T  15360843 gttatttctataacaaaagataaaataaagtcaaactgttttcata 15360888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 28467420 - 28467383
Alignment:
Q  246 tataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcata 28467383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 29794109 - 29794001
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  |||||||||| | |||||||||| ||||| ||||||  ||| || |||| | | ||||| | ||| |||||||||||| |||||||    
T  29794109 tttggataaacagcttaattaagcgcttatagcataagtgtttttcatatatgtgtttatgtataggctatttttgtaacaaaagataaaat-aagtcaa 29794011  T
Q  272 attattttca 281  Q
    ||| ||||||    
T  29794010 attgttttca 29794001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 30458211 - 30458126
Alignment:
Q  180 aacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataa 265  Q
    ||||| ||||||||||||||||| |||||  | ||||| ||   |||||| |||||||||||| ||||||| || |||||||||||    
T  30458211 aacaacttaattaagcacatataacataatcgcttatcctaaatgtgcttatgtacatgttatatctataacaagagataaaataa 30458126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 44251369 - 44251406
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatt 277  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  44251369 tatttctataataaaagataaaataaagttaaattatt 44251406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 44936711 - 44936666
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  44936711 gttatttctataacaaaagataagataaagtcaaactattttcata 44936666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 45107532 - 45107616
Alignment:
Q  198 atatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||  | |||||||| ||||||| | || | | ||||||||||| |||| |||||||||||||||| ||||||||||    
T  45107532 atatagcataaacatctatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcata 45107616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 45804226 - 45804271
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||    
T  45804226 gttatttctataataaataataaaataaagtcaaactattttcata 45804271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 17269133 - 17269244
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||| ||| || |||||  ||  ||| |||||| |||| |||||| ||||||| |||| | |||||||||| || |||||  ||||||||||||    
T  17269133 atttggataagcaacttgattaaatactgatatcataaacgttt-tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtca 17269231  T
Q  271 aattattttcata 283  Q
    |||| ||||||||    
T  17269232 aattgttttcata 17269244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 42352025 - 42351981
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  42352025 tatttctataacaaaagttaaaataaagtcaaactattttcataa 42351981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 48282057 - 48282125
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataata-aaagataaaataaagtcaaattattttc 280  Q
    ||||||||| ||||||| |||| | | ||||||||||| | |||||||||||||||||||| |||||||    
T  48282057 ttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttc 48282125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 49557065 - 49557125
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaat 273  Q
    ||||||||| ||||||  |||| | ||||||||||||| ||||||||||||||||| ||||    
T  49557065 ttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaat 49557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 50319243 - 50319287
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| |||||||||||||||||||| || |||||||||    
T  50319243 tatttctataacaaaagataaaataaagtcaagttgttttcataa 50319287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 7218193 - 7218150
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||    
T  7218193 tatttccataataaaaggtaaaataaagtcaaattgttttcata 7218150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 17628550 - 17628593
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||    
T  17628550 tatttctatattaaaagataaagtaaagtcaaattgttttcata 17628593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 38651595 - 38651484
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||||||||||   |||||| |||  ||||| |||  |||||||||| | ||||||| |||| | | || |||||||| |||||||||| ||||||| ||    
T  38651595 ttggataaacagactaattatgcatttatagaatacgtgtttatcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtcgaa 38651496  T
Q  273 ttattttcataa 284  Q
    || |||||||||    
T  38651495 ttgttttcataa 38651484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 46499973 - 46499934
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  46499973 tatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 24153164 - 24153214
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtg 226  Q
    ||||||||| |||||||| ||| |||| |||| ||||||||||||||||||    
T  24153164 gataaacaacttaattaaacacttataacatatatgtttatcatatgagtg 24153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 43372119 - 43372037
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttca 281  Q
    ||||||||||  | ||||||||| |  |||| |||| | | ||||||||||| || |||||||||| ||||||||||||||||    
T  43372119 tatagcataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttca 43372037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 4200178 - 4200223
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||||| |||||||||||||||||||| || ||||||||    
T  4200178 gttatttttataacaaaagataaaataaagtcaagttgttttcata 4200223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 4549802 - 4549851
Alignment:
Q  225 tgcttttgtacatgttatttctataataaaagataaaataaagtcaaatt 274  Q
    ||||| |||||| | ||||||||||| ||||||||||||||||| |||||    
T  4549802 tgcttatgtacaagctatttctataacaaaagataaaataaagttaaatt 4549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 8795065 - 8795106
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||| ||||||||||||||||||||||| |||| |||||    
T  8795065 gttatttatataataaaagataaaataaagttaaataatttt 8795106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 10854647 - 10854716
Alignment:
Q  203 gcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||| ||||||||| |||| || || | | |||||||||  |||| |||||||||||||||||||    
T  10854647 gcataaatgcttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaa 10854716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 11211067 - 11211112
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| || ||||||||||||||||| ||||| ||||||||    
T  11211067 gttatttctagaacaaaagataaaataaagttaaatttttttcata 11211112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 23895218 - 23895319
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||| || || |||||||||||| || |||||||    ||||||||| |||  || |||| | | ||||||||||| ||||||||||||||| |||    
T  23895218 atttggatgaataacttaattaagcacttaaagcataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattca 23895317  T
Q  271 aa 272  Q
    ||    
T  23895318 aa 23895319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 27738297 - 27738256
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcata 27738256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 28075669 - 28075702
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagca 205  Q
    |||||||||||||||||||||||||| |||||||    
T  28075669 tttggataaacaatttaattaagcacttatagca 28075702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 29007837 - 29007792
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| |||||| ||| |||||||||| ||||||||||    
T  29007837 gttatttctataacaaaagaaaaattaaagtcaaactattttcata 29007792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 30815752 - 30815711
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||    
T  30815752 tttctataacaaaagataaaataaagttaaactattttcata 30815711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 35591032 - 35590983
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatat 221  Q
    ||||||||||||  | |||||||||| |||||| ||||||||||||||||    
T  35591032 tttggataaacacctcaattaagcacttatagcgtaaatgtttatcatat 35590983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 44032116 - 44032075
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||    
T  44032116 tttctataacaaaagctaaaataaagtcaaattgttttcata 44032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 48830197 - 48830152
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| |  |||||||||||||||||||| ||||||||||    
T  48830197 gttatttctattaccaaagataaaataaagtcaaactattttcata 48830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 49365975 - 49365918
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgctt 229  Q
    ||||||||||||| ||| |||||| | ||||||||||| |||||| |||| |||||||    
T  49365975 tttggataaacaacttagttaagcgcttatagcataaacgtttataatataagtgctt 49365918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 52559948 - 52559907
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    |||| ||||||| |||| ||||||||||||||||||||||||    
T  52559948 ttatatctataacaaaatataaaataaagtcaaattattttc 52559907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 4202277 - 4202217
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||| |||||||  ||| | ||||||||||||| ||||||||||  ||||||||    
T  4202277 gtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 6976899 - 6976943
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| ||||||||| ||||||| ||| |||||||||||    
T  6976899 tatttctataacaaaagataagataaagttaaactattttcataa 6976943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 7200961 - 7200929
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    |||||| ||||||||||||||||||||||||||    
T  7200961 tatttccataataaaagataaaataaagtcaaa 7200929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 9656600 - 9656644
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||  |||| |||||||||||| ||||||||||||||    
T  9656600 ttatttctatagcaaaaaataaaataaagttaaattattttcata 9656644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 26293225 - 26293181
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| ||||  ||||||||||||||||| |||||||||    
T  26293225 tatttctataacaaaaagtaaaataaagtcaaattgttttcataa 26293181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 36151624 - 36151584
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttc 280  Q
    |||||| |||| ||||||||||||||||||||||| |||||    
T  36151624 tatttcaataacaaaagataaaataaagtcaaattgttttc 36151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 42336588 - 42336644
Alignment:
Q  215 atcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||| ||||||| |||| | ||||||| ||||| |||| |||||||||||||||    
T  42336588 atcatattagtgcttatgtataggttatttttataacaaaaaataaaataaagtcaa 42336644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 47002994 - 47002954
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  47002994 ttatttcgataataaaagataaaataaagttaaattgtttt 47002954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 47877072 - 47877116
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| |||| ||||||||||||||| ||||||| ||||||||    
T  47877072 ttatttcaataacaaaagataaaataaaatcaaattgttttcata 47877116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 48748733 - 48748658
Alignment:
Q  208 aatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||||||  |||||| |||| | | ||||||||| | ||||||| ||||||||| ||||| |||||||||    
T  48748733 aatgtttatcatatatgtgcttatgtataagctatttctat-acaaaagatgaaataaagttaaattgttttcataa 48748658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 49692171 - 49692139
Alignment:
Q  238 gttatttctataataaaagataaaataaagtca 270  Q
    ||||||||||||||||| |||||||||||||||    
T  49692171 gttatttctataataaaggataaaataaagtca 49692139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 50998450 - 50998546
Alignment:
Q  187 taattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||| ||||  |||||||||||  | |||| |||| | | ||||||| ||| ||||||||||| ||| ||||| || |||||||    
T  50998450 taattaagcccatatagtataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcata 50998546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 1259 - 1150
Alignment:
Q  174 tggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaat 273  Q
    ||||||||||| ||||||||| || ||||||||||| || |||||||| ||||||| |||| | | ||||||||||| |||||||||||||||||||||     
T  1259 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 1160  T
Q  274 tattttcata 283  Q
    |||| |||||    
T  1159 tattctcata 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 2716 - 2825
Alignment:
Q  174 tggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaat 273  Q
    ||||||||||| ||||||||| || ||||||||||| || |||||||| ||||||| |||| | | ||||||||||| |||||||||||||||||||||     
T  2716 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 2815  T
Q  274 tattttcata 283  Q
    |||| |||||    
T  2816 tattctcata 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 4558681 - 4558792
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||||||| || | ||||||||||| |||||| || | |||| || |||| | | ||||||||||||||||||||||||||||| ||    
T  4558681 tttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaa 4558780  T
Q  272 attattttcata 283  Q
    ||||||||||||    
T  4558781 attattttcata 4558792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 29699136 - 29699237
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||| | ||| |||||  | |||||||||||| |||||||||| | ||||| |||||| ||||||||||||| |||||||||||||||||||    
T  29699136 atttggataaacgacttagttaagtgcttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtca 29699235  T
Q  271 aa 272  Q
    ||    
T  29699236 aa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 43907987 - 43907874
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||||  |||||||| | | |||| |||||||||||||||||| |||| ||   |||| ||||||||||   ||||||||||||||||||||    
T  43907987 atttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagtca 43907888  T
Q  271 aattattttcataa 284  Q
    |||| |||||||||    
T  43907887 aattgttttcataa 43907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 8799302 - 8799394
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattt 278  Q
    |||||||||||| ||||||| ||||| |||||||||  |||||| | |  ||||||||||||||| ||||||||||||||||||||| |||||    
T  8799302 ttaattaagcacttatagcacaaatgcttatcatatatgtgcttgtatgtatgttatttctataacaaaagataaaataaagtcaaactattt 8799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 14482085 - 14482192
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||| ||||||||||||||||||  | |||||||| | || ||||||||| ||||||| |||| |   ||||||||||| ||||||||||||||||||||    
T  14482085 tttgaataaacaatttaattaagttcttatagcattagtgcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaa 14482184  T
Q  272 attatttt 279  Q
    ||| ||||    
T  14482185 attgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 34563137 - 34563245
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatta 275  Q
    ||||||||| |||||||| | | |||||||||||  |||||||||| ||||||| | || | ||||||||||| | ||| |||||||||||||||||  |    
T  34563137 gataaacaacttaattaaacgcttatagcataaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaa 34563236  T
Q  276 ttttcataa 284  Q
    |||||||||    
T  34563237 ttttcataa 34563245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 11494069 - 11494147
Alignment:
Q  205 ataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||||||||| |||||||||||| |||||||||  |||| ||||||||| ||||||||||| | ||||||||    
T  11494069 ataaatgcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcata 11494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 3645976 - 3645892
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| |||||||||||| ||||||| |||| | | ||||||||||| |||| |||||| ||| ||||| ||||||||||    
T  3645976 tatagcataagtgtttatcatataagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaactattttcata 3645892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 1470975 - 1470932
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  1470975 tatttctataataaaagataaaataaagtcaaattactttcata 1470932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 7026614 - 7026725
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||||||||  || ||||||||  |||||||||| ||||||| || | | | || |  ||||| ||||||||||||||||| ||    
T  7026614 tttggataaacaacttaattaagcatttacagcataaacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaa 7026713  T
Q  272 attattttcata 283  Q
    ||| ||||||||    
T  7026714 attgttttcata 7026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 29262991 - 29262950
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  29262991 tttctataatagaagataaaataaagtcaaattattttcata 29262950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 27728149 - 27728097
Alignment:
Q  231 tgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| | ||||||||||| ||||||||||||||||||||| ||||||||||    
T  27728149 tgtacaggctatttctataaaaaaagataaaataaagtcaaactattttcata 27728097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 31884476 - 31884568
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaat 263  Q
    |||||||||||||| | |||||||||| ||||||||||  | ||||||||  ||||| | |||| | ||||||||||||| |||| |||||||    
T  31884476 atttggataaacaactcaattaagcacttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaat 31884568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 40280392 - 40280280
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||| ||||||| |||||||| | |||||||  |  | ||||||||| ||||| | | || | |||||||||| || ||||||||||||||||| ||    
T  40280392 tttggattaacaattgaattaagcgcttatagcaatagcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaa 40280293  T
Q  272 attattttcataa 284  Q
    ||| |||||||||    
T  40280292 attgttttcataa 40280280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 787277 - 787182
Alignment:
Q  188 aattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| ||||||||||||||||||||| | ||||||| |||  | | | ||||  ||| | ||||||||||||||||||||| || |||||    
T  787277 aattaagcacttatagcataaatgtttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcata 787182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 39392843 - 39392748
Alignment:
Q  177 ataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| || |||||||||||  |||||||||| || ||||||||| ||||  | |||| |   ||||||||||| |||||||||||||||||||||    
T  39392843 ataaataacttaattaagcatttatagcataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 2364660 - 2364558
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||||||||  || |||||| | |||||||||| |||||||||||| | |  || |||| | | ||||| ||||  ||||||||||||||||||||    
T  2364660 tttggataaacaacatagttaagcgcttatagcataagtgtttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaa 2364561  T
Q  272 att 274  Q
    |||    
T  2364560 att 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 283
Target Start/End: Original strand, 10722512 - 10722625
Alignment:
Q  170 gatttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgta-catgttatttctataataaaagataaaataaagt 268  Q
    ||||||||||||||| |||||||||| | || ||||||||    |||||||| ||||||| ||||  || |||||| |||||  |||||||||||||| |    
T  10722512 gatttggataaacaacttaattaagcgcttaaagcataaacacatatcatataagtgcttgtgtataatcttatttatataa-caaagataaaataaact 10722610  T
Q  269 caaattattttcata 283  Q
     ||||||||||||||    
T  10722611 aaaattattttcata 10722625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 10727079 - 10727189
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    ||||||| || ||| |||||||||||  |||||||||| |||| ||||||| ||||||| || | | | ||||||||||  ||||||| ||||||| |||    
T  10727079 atttggacaaccaacttaattaagcatttatagcataagtgttcatcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattca 10727178  T
Q  271 aattattttca 281  Q
    || | ||||||    
T  10727179 aagtgttttca 10727189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 26820148 - 26820189
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  26820148 gttatttctataacaaaagataaaataaagtcaaactatttt 26820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 36643990 - 36643946
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||||||||||||||| | |||||||||| |||||||||||    
T  36643990 tatttctataataaaagatacagtaaagtcaaactattttcataa 36643946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 7008512 - 7008612
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||||||| | ||||||||||  ||||||||||  |  | ||||||| |   ||||||||||| ||  ||||||||||||||||    
T  7008512 tttggataaacaacttaattaagcgcttatagcataagcgtttatcata--aaagattttgtataatctatttctataacaatggataaaataaagtcaa 7008609  T
Q  272 att 274  Q
    |||    
T  7008610 att 7008612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 25867037 - 25867080
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  25867037 tatttctataacaaaagatgaaataaagtcaaaatattttcata 25867080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 26716618 - 26716518
Alignment:
Q  177 ataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattat 276  Q
    |||||||| | |||||||||| |||||||||||   |||| |||| ||||||| |||| | | || |||||||| ||  ||| |||||||||||||||||    
T  26716618 ataaacaactaaattaagcacctatagcataaacacttattatataagtgcttatgtataagctacttctataacaa--gattaaataaagtcaaattat 26716521  T
Q  277 ttt 279  Q
    |||    
T  26716520 ttt 26716518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 28784914 - 28784875
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatttt 279  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  28784914 tatttctaaaataaaagataaaataaagtcaaattgtttt 28784875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 31315572 - 31315533
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  31315572 tatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 35535007 - 35534948
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||| ||||||| | || | | ||||||||||||||||| |||||||||||||||    
T  35535007 ttatcatataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaa 35534948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 41336832 - 41336721
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||||||||   | ||||||||||  |||||||| || | ||||| |||| |  | |||| ||| | ||||||||||||| ||||||    
T  41336832 tttggataaacaacttaattaattgcttatagcataagcgtttatcaaataaatgcttatgtataaatcatttttatgacaaaagataaaatatagtcaa 41336733  T
Q  272 attattttcata 283  Q
    ||| ||||||||    
T  41336732 attgttttcata 41336721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 281
Target Start/End: Original strand, 1112787 - 1112845
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttca 281  Q
    ||||||| |||| ||| ||||||||||| |||||||||||||| || ||||| ||||||    
T  1112787 agtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttca 1112845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 27320199 - 27320304
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||| ||||||||||||||||| | |||||||||||   |||||| || |||||||  ||| | | |||| |||||  ||||||| ||||||||||||    
T  27320199 tttggaaaaacaatttaattaagcgcttatagcataaacacttatcacataagtgcttacgtataagctattcctatagcaaaagat-aaataaagtcaa 27320297  T
Q  272 attattt 278  Q
    | |||||    
T  27320298 actattt 27320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 40357856 - 40357894
Alignment:
Q  246 tataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  40357856 tataacaaaagataaaataaagtaaaattattttcataa 40357894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 272
Target Start/End: Complemental strand, 40728539 - 40728505
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||||| |||||||||||||||||||||    
T  40728539 gttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 41620437 - 41620367
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||  ||||||| | || | ||||||| | ||| ||||||||||||||||||||||||| ||||||    
T  41620437 ttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcata 41620367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 42597352 - 42597394
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  42597352 tatttctataacaaaagataaaataaagtaaaattgttttcat 42597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 1433445 - 1433518
Alignment:
Q  189 attaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaa 262  Q
    ||||||||| ||| | ||||||  ||||||||| |||| || |||| | |||||||||||||||||||| ||||    
T  1433445 attaagcacttatggtataaatacttatcatataagtggttatgtataagttatttctataataaaagaaaaaa 1433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 2100758 - 2100799
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||  ||||||||||||||||||||| ||||||||||    
T  2100758 tttctatagcaaaagataaaataaagtcaaaatattttcata 2100799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 5071136 - 5071043
Alignment:
Q  190 ttaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||| ||| ||||||||||| || ||||||||   | ||| |||| | ||| |||||||| ||||| |||||||||||||||| | ||||||||    
T  5071136 ttaatcacttatagcataaacgtgtatcatatacattcttatgtataagttgtttctatagtaaaatataaaataaagtcaaacttttttcata 5071043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 12225020 - 12224975
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||  | ||||||||||||||||||||| ||||||||||    
T  12225020 gttatttctaagacaaaagataaaataaagtcaaactattttcata 12224975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 12361141 - 12361186
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||  ||||||||||| |||||||||| ||||||||    
T  12361141 gttatttctataaataaagataaaatgaagtcaaattgttttcata 12361186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 38561675 - 38561716
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||    
T  38561675 gttatttatataacaaaagataaaataaagtcaaactatttt 38561716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 40279768 - 40279719
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatat 221  Q
    ||||||| |||||||||||||||| | ||||  |||||||||||||||||    
T  40279768 tttggatcaacaatttaattaagcgcttataatataaatgtttatcatat 40279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 2093231 - 2093263
Alignment:
Q  241 atttctataataaaagataaaataaagtcaaat 273  Q
    ||||| |||||||||||||||||||||||||||    
T  2093231 atttcaataataaaagataaaataaagtcaaat 2093263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 6918298 - 6918266
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| |||||||||||||||||||||||||||    
T  6918298 tatttatataataaaagataaaataaagtcaaa 6918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 7714124 - 7714220
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaag 267  Q
    |||||||||| ||| |||||||  |||||| || ||||| | ||||||  |||| |||| |||| | ||||  ||||||| ||||||||||||||||    
T  7714124 atttggataagcaacttaattacacacatacagtataaacgcttatcacgtgagcgcttatgtataagttacatctataacaaaagataaaataaag 7714220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 11000680 - 11000640
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttc 280  Q
    |||||| |||| ||||||||||||||||||||||| |||||    
T  11000680 tatttccataacaaaagataaaataaagtcaaattgttttc 11000640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 11119118 - 11119086
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||| |||||||||||||||||||||    
T  11119118 tatttctataacaaaagataaaataaagtcaaa 11119086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 14929235 - 14929191
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||||||||||||| |||||| ||||||| | |||||||||    
T  14929235 tatttctataataaaagacaaaatagagtcaaactgttttcataa 14929191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 26215447 - 26215487
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||||||| ||||||||||||||||| ||| |||||||    
T  26215447 tatttctataacaaaagataaaataaagttaaactattttc 26215487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 28769526 - 28769418
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  | ||| |||||  |||||||||| || ||||||||| | ||||| |||| | | |||| |||||| |||  ||||||| |||||||    
T  28769526 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaa 28769427  T
Q  272 attattttc 280  Q
    | |||||||    
T  28769426 actattttc 28769418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 40356822 - 40356854
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| |||||||||||||||||||||||||||    
T  40356822 tatttatataataaaagataaaataaagtcaaa 40356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 37611372 - 37611268
Alignment:
Q  178 taaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatt 277  Q
    |||||||||||||||||||| ||||||||||||| || |||||| ||||||| |||| | | |||||||||||||||||  ||||| || ||||||| ||    
T  37611372 taaacaatttaattaagcacttatagcataaatggttgtcatataagtgcttatgtaaaagctatttctataataaaag--aaaatcaaatcaaattgtt 37611275  T
Q  278 ttcataa 284  Q
    |||||||    
T  37611274 ttcataa 37611268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 37788102 - 37787998
Alignment:
Q  178 taaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatt 277  Q
    |||||||||||||||||||| ||||||||||||| || |||||| ||||||| |||| | | |||||||||||||||||  ||||| || ||||||| ||    
T  37788102 taaacaatttaattaagcacttatagcataaatggttgtcatataagtgcttatgtaaaagctatttctataataaaag--aaaatcaaatcaaattgtt 37788005  T
Q  278 ttcataa 284  Q
    |||||||    
T  37788004 ttcataa 37787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 35135846 - 35135738
Alignment:
Q  175 ggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatt 274  Q
    |||||||||| |||||| | |||  ||||||||| || ||| ||||| |||| || |||| | | ||||||||||| ||||||||||||||||||||| |    
T  35135846 ggataaacaacttaattcaacactcatagcataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaact 35135747  T
Q  275 attttcata 283  Q
    |||||||||    
T  35135746 attttcata 35135738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 37619026 - 37618926
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||||| ||| ||||||| || | | | ||||||||| |||||||||||||| || ||||    
T  37619026 tttggatgaacaacttaattaagcacatacagcataagtgtttatcgtataagtgcttatgcaaaagctatttctattataaaagataaaatgaaatcaa 37618927  T
Q  272 a 272  Q
    |    
T  37618926 a 37618926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 39257573 - 39257473
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||||||| | |||||||||||   ||||||| | ||||||| |||| ||| ||| ||||||| ||||| ||||||||||||||    
T  39257573 tttggataaacaacttaattaagcgcttatagcataaactattatcatgtaagtgcttatgtatatgctatctctataacaaaaggtaaaataaagtcaa 39257474  T
Q  272 a 272  Q
    |    
T  39257473 a 39257473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 20982322 - 20982223
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| || ||||||  | |||||||||| || ||||||||| ||||||| |||| | | ||||||||||| ||| ||||||||||||||||    
T  20982322 tttggataaacaacttcattaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 266
Target Start/End: Original strand, 26516181 - 26516275
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaa 266  Q
    ||||||||||||| |||||||||| | ||||||||||  | ||||||||| ||||||| |||| | | |||||||| || |||||||||||||||    
T  26516181 tttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 37063260 - 37063150
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||||||||||  ||||| ||  || ||||||||||||| || |||||| | ||||| |||| |   ||||||||||| |||||||||||||||||||||    
T  37063260 ttggataaacagcttaatcaactacttatagcataaatgcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 37063161  T
Q  273 ttattttcata 283  Q
     ||||||||||    
T  37063160 ctattttcata 37063150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 29115400 - 29115302
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||| |||||||| || | |||||||||||  |||||||||  ||||||| |||| | | |||||||| || ||||| |||||||||||||    
T  29115400 tttggataaacactttaattacgcgcttatagcataaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagtca 29115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 18704224 - 18704124
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgttta-tcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    |||||||||||||| |||||||||| | | |||||||| |||| | |||||| ||| ||| |||| | ||||||||||||| ||||||| ||||||||||    
T  18704224 atttggataaacaacttaattaagctcttgtagcataagtgttaaatcatataagttcttatgtataagttatttctataacaaaagat-aaataaagtc 18704126  T
Q  270 aa 271  Q
    ||    
T  18704125 aa 18704124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 34690764 - 34690868
Alignment:
Q  179 aaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattt 278  Q
    |||||| |||| ||||| | |||| |||||||||| ||||| | ||| ||| |||| | | ||||||||||| ||||||||||||||||||| | || ||    
T  34690764 aaacaacttaactaagcgcttataccataaatgttaatcatttaagtccttatgtatacgctatttctataacaaaagataaaataaagtcacaatactt 34690863  T
Q  279 tcata 283  Q
    |||||    
T  34690864 tcata 34690868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 6738567 - 6738484
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    |||||||||||   ||||||||| ||| ||| |||| | | |||||| ||||||||||| |||||||||||||||| |||||||    
T  6738567 tatagcataaacacttatcatataagtacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcat 6738484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 10303752 - 10303794
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  10303752 tatttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 35960365 - 35960403
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattt 278  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  35960365 tatttctataataaaagataaaataaagtcaaactattt 35960403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 7096263 - 7096202
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||| |||| | | ||||||||||| |||||||||||||||||||||  ||||||||||    
T  7096263 agtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcataa 7096202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 29117058 - 29117017
Alignment:
Q  231 tgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  29117058 tgtatatgttatttctataacaaaagataaaataaagtcaaa 29117017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 32969234 - 32969197
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32969234 tttctataacaaaagataaaataaagtcaaattatttt 32969197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 35963137 - 35963242
Alignment:
Q  178 taaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatt 277  Q
    ||||||| |||| ||||||| ||||||||||  | |||||| || ||||||| |||| |  |||||||||||| ||||||| ||||||| | ||| | ||    
T  35963137 taaacaacttaactaagcacttatagcataagcgattatcaaataagtgcttgtgtataaattatttctataagaaaagatcaaataaaattaaactgtt 35963236  T
Q  278 ttcata 283  Q
    ||||||    
T  35963237 ttcata 35963242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 40097560 - 40097483
Alignment:
Q  202 agcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||| |||||||||||||| ||||| | |||| | ||||||||||||| | ||||||||||| ||| ||||| ||||    
T  40097560 agcatcaatgtttatcatataagtgcgtatgtataagttatttctataacagaagataaaatagagttaaattgtttt 40097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 6739755 - 6739855
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||| || ||||  | |||| |||||  ||||||||||| || | || |||| | || ||||||||||  |||||||||||||||||||    
T  6739755 tttggataaacaattgaactaagtgcttatatcataagcgtttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaa 6739854  T
Q  272 a 272  Q
    |    
T  6739855 a 6739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 14295457 - 14295500
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcata 14295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 28586885 - 28586842
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||    
T  28586885 tatttctataacaaaagataaaataaagtcaaactgttttcata 28586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 283
Target Start/End: Complemental strand, 38047962 - 38047931
Alignment:
Q  252 aaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||||||||    
T  38047962 aaaagataaaataaagtcaaattattttcata 38047931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 985575 - 985625
Alignment:
Q  231 tgtacatgttatttctataataaaagataaaataaagtcaaattattttca 281  Q
    |||| |||||||||| |||| ||||||||||||||||||||| | ||||||    
T  985575 tgtatatgttatttccataacaaaagataaaataaagtcaaactgttttca 985625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 10363701 - 10363743
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  10363701 tatttctataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 17756878 - 17756808
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||| ||||||| ||||   ||| ||||| ||| | ||||||||||||||||||||| |||||    
T  17756878 tgtttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 35095902 - 35095868
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaatt 274  Q
    ||||||||||| |||||||||||||||||||||||    
T  35095902 tatttctataacaaaagataaaataaagtcaaatt 35095868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 40097160 - 40097202
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||| | |||||||||||||| ||||||||||||||||    
T  40097160 tatttctatcacaaaagataaaataatgtcaaattattttcat 40097202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 1943201 - 1943230
Alignment:
Q  239 ttatttctataataaaagataaaataaagt 268  Q
    ||||||||||||||||||||||||||||||    
T  1943201 ttatttctataataaaagataaaataaagt 1943230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 4948650 - 4948609
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||| ||||||||||||||||| ||||||| |||||||    
T  4948650 ttctataacaaaagataaaataaagttaaattatattcataa 4948609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 12595857 - 12595816
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcata 12595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 40048416 - 40048359
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||| |||| | ||| ||||||||| ||||||||||||||||| | |||||||||    
T  40048416 agtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 40499821 - 40499764
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    ||||||||| ||||||| |||||| ||||||||||||| ||| |||||| | ||||||    
T  40499821 ttatcatataagtgcttatgtacaagttatttctataacaaatgataaagtcaagtca 40499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 6593252 - 6593288
Alignment:
Q  241 atttctataataaaagataaaataaagtcaaattatt 277  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  6593252 atttctataacaaaagataaaataaagttaaattatt 6593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 11054137 - 11054165
Alignment:
Q  240 tatttctataataaaagataaaataaagt 268  Q
    |||||||||||||||||||||||||||||    
T  11054137 tatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 12242807 - 12242763
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  12242807 tatttgtataacaaaagataaaatagagtcaaattgttttcataa 12242763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 29590859 - 29590823
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattat 276  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  29590859 tatttctataacaaaagataaaataaagtcaacttat 29590823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 38766964 - 38766920
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||||| ||||| ||||||||||| ||| |||||||||    
T  38766964 gttatttctataacaaaagctaaaataaagttaaactattttcat 38766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 39823241 - 39823197
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| ||||| ||||||||||||||||||||| || |||||||    
T  39823241 ttatttatataacaaaagataaaataaagtcaaactactttcata 39823197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 41052773 - 41052885
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||||||||||||||||||  | | ||||||||| | |||||| |   |||||| |||| | | | |||| |||||||||||| ||||||| | ||    
T  41052773 tttggataaacaatttaattaagtgcttgtagcataaacgcttatcagacaggtgcttatgtataagctttttcaataataaaagatcaaataaacttaa 41052872  T
Q  272 attattttcataa 284  Q
    | | |||||||||    
T  41052873 actgttttcataa 41052885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 277
Target Start/End: Original strand, 31461325 - 31461426
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatta 275  Q
    ||||||||| |||||||||||| | ||||||||| || |||||||| |||| || | || | | ||||||||||| ||||||||||||||||||||||||    
T  31461325 gataaacaacttaattaagcacttctagcataaacgtatatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatta 31461424  T
Q  276 tt 277  Q
    ||    
T  31461425 tt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 37845533 - 37845442
Alignment:
Q  178 taaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    |||||||||||||||| ||| |||||| |||||||||||||||| ||| ||| | || ||| ||||| |||||||||| |||||||||||||    
T  37845533 taaacaatttaattaaacacttatagcgtaaatgtttatcatataagttcttatttatatgctatttttataataaaatataaaataaagtc 37845442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 11393553 - 11393451
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  |||||||||||| ||||||| || |||||||||||| ||||||| | || | | ||||||||||  |||||||| |||||| ||||    
T  11393553 tttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11393454  T
Q  272 att 274  Q
    |||    
T  11393453 att 11393451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 274
Target Start/End: Complemental strand, 11410214 - 11410112
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  |||||||||||| ||||||| || |||||||||||| ||||||| | || | | ||||||||||  |||||||| |||||| ||||    
T  11410214 tttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaa 11410115  T
Q  272 att 274  Q
    |||    
T  11410114 att 11410112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 35459807 - 35459901
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    |||||| ||| | |||||||||| |||||||||||| |||| ||||||| | | ||||| ||||  ||||||||||||||||||||||| |||||    
T  35459807 ttaattcagctcttatagcataagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttc 35459901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28803688 - 28803593
Alignment:
Q  177 ataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||| ||||||||||    ||| ||||||||| ||||||||| ||||||| | || | |||||||| |||| |||||||||||||||||||||    
T  28803688 ataaacagtttaattaagtgtttatggcataaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaa 28803593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 33197426 - 33197327
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| | |||||| ||| |||| |||||| | ||||||||| ||||||| | || | | ||||||||||| |||||||| |||||||||||    
T  33197426 tttggataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 18884764 - 18884876
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctat-aataaaagataaaataaagtca 270  Q
    ||||||||||||  ||||| |||||| |||||||| | | |||||||||| ||||||  |||| | ||||||||||| || |||| |||||||||| |||    
T  18884764 tttggataaacagcttaatcaagcacttatagcattagtttttatcatataagtgctcatgtataagttatttctataaaaaaaatataaaataaaatca 18884863  T
Q  271 aattattttcata 283  Q
    || | ||||||||    
T  18884864 aactgttttcata 18884876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 35252295 - 35252207
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatt 274  Q
    |||||||| ||| || || ||||  ||||||||||| | || || |||| |||||||| || |||||||||||||||||||||||||||    
T  35252295 ttaattaaacacttagaggataatggtttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaaatt 35252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 3102576 - 3102683
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  || ||||||| | || | |||||||||||||||||| | ||||| |||| | | ||||| ||||  |||| |||||||||||||||    
T  3102576 tttggataaacagctttattaagcgcttaaaacataaatgtttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaa 3102675  T
Q  272 attatttt 279  Q
    | ||||||    
T  3102676 actatttt 3102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 4550660 - 4550759
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||||||||  || ||||||||||    |||||| || ||||||| |||| | ||| |||| ||||||||||||||||||| |||||    
T  4550660 tttggataaacaacttaattaacaacttatagcataatctcttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaa 4550759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 17952820 - 17952777
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  17952820 tatttctataacaaaagataaaataaagtcaaactattttcata 17952777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Original strand, 6988068 - 6988106
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6988068 tttctataacaaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 1939453 - 1939408
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  1939453 gttatttctataacaaaagataaaataaagtgaaactattttcata 1939408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 3673728 - 3673801
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| |||||| ||||||| ||||   ||||||||||||| |||| |||||||||||| ||||| ||||||||    
T  3673728 tgtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcata 3673801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 25609730 - 25609787
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||| |||| | | ||||||||||| |||||||||||||||||||| ||||||||    
T  25609730 agtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttc 25609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 32098427 - 32098378
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataatttat 289  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||| ||||    
T  32098427 tatttctataacaaaagataaaataaagtcaaagtgttttcataagttat 32098378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 37033962 - 37034039
Alignment:
Q  207 aaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||| ||||||||||| | ||| |||| |   ||||||||||| |||||||||||||||||||||  ||||||||||    
T  37033962 aaatgcttatcatatgaatacttatgtataaactatttctataaaaaaagataaaataaagtcaaacgattttcataa 37034039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 5511499 - 5511559
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| |||| | |||||||||||||| ||| |||||||||||||||| | ||||||||    
T  5511499 agtgcttctgtataagttatttctataatgaaatataaaataaagtcaaacttttttcata 5511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 5942808 - 5942904
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagt 268  Q
    ||||||||||||| |||||||||| | ||| ||||||    |||||| ||  |||||| |||||| | ||||||||||  |||||||||||||||||    
T  5942808 tttggataaacaacttaattaagcgcttattgcataagcacttatcacatcggtgcttgtgtacaagctatttctatatcaaaagataaaataaagt 5942904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 11393827 - 11393747
Alignment:
Q  187 taattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaag 267  Q
    ||||||||||| |||||||||||  |||||||| | ||||||| |||| | | ||||||||||  |||||||| |||||||    
T  11393827 taattaagcacttatagcataaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaag 11393747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 11410488 - 11410408
Alignment:
Q  187 taattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaag 267  Q
    ||||||||||| |||||||||||  |||||||| | ||||||| |||| | | ||||||||||  |||||||| |||||||    
T  11410488 taattaagcacttatagcataaacatttatcatttaagtgcttatgtataagctatttctataccaaaagatacaataaag 11410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 29633021 - 29633069
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcataatt 286  Q
    ||||||||||||| |||| ||| |||||||||||||| |||||||||||    
T  29633021 gttatttctataacaaaaaatagaataaagtcaaattgttttcataatt 29633069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 283
Target Start/End: Complemental strand, 3423875 - 3423844
Alignment:
Q  252 aaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||||||||    
T  3423875 aaaagataaaataaagtcaaattattttcata 3423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 11344403 - 11344360
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  11344403 tatttctataacaaaagataaaagaaagtcaaattgttttcata 11344360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 27288557 - 27288616
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| ||| ||||||| |||| | ||| ||||||||||||||||||||||||| |||||    
T  27288557 ttatcctataagtgcttatgtaaaagttgtttctataataaaagataaaataaaatcaaa 27288616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 31740078 - 31740035
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||  |||||||||||||||||||| ||||||||||    
T  31740078 tatttctataactaaagataaaataaagtcaaactattttcata 31740035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 40837547 - 40837504
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||    
T  40837547 tatttctataacaaaagataaattaaagtcaaattgttttcata 40837504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 10150679 - 10150749
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||| |||| |||| || |||| | |||||||||||||||||||||||||||| || ||||  ||||||||    
T  10150679 ttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 17775566 - 17775520
Alignment:
Q  174 tggataaacaatttaattaagcacatatagcataaatgtttatcata 220  Q
    ||||||||||| ||||| |||||| ||||||||| ||||||||||||    
T  17775566 tggataaacaacttaatcaagcacttatagcatacatgtttatcata 17775520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 31228966 - 31228893
Alignment:
Q  212 tttatcatatgagtgcttttgtacatgttatttctataat--aaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| |||| || || ||||||||||||||||    |||||||||||||||| |||||| ||||||||    
T  31228966 tttatcatataagtggttatgcacatgttatttctatagctcaaaagataaaataaaggcaaattgttttcata 31228893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 40672917 - 40672871
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| | ||||||||||||||||||| ||| |||||||||    
T  40672917 gttatttctatgaaaaaagataaaataaagtcacattgttttcataa 40672871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 42817550 - 42817464
Alignment:
Q  185 tttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||  | ||||||||||  ||||||||||| |||| |  | || ||||||||||||||  |||||||||||| |||||||    
T  42817550 tttaattaagtgcttatagcataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaa 42817464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 42974235 - 42974345
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||| ||| |||||||||  | |||||||||||   ||||||||| ||||||| |||| |   ||||||||||| ||||| | | ||||||||||    
T  42974235 tttggataagcaacttaattaagagcttatagcataaacacttatcatattagtgcttgtgtataaactatttctataacaaaaggtcatataaagtcaa 42974334  T
Q  272 attattttcat 282  Q
    |  ||||||||    
T  42974335 acaattttcat 42974345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 750098 - 750131
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||| ||||||||||||||||||    
T  750098 gttatttctataatacaagataaaataaagtcaa 750131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 3458606 - 3458651
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||||| ||||||||||||||||||||| | ||||||||    
T  3458606 gttatttttataacaaaagataaaataaagtcaaacttttttcata 3458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 9875629 - 9875548
Alignment:
Q  187 taattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagt 268  Q
    ||||||||| |||||| |||||| | | |||||||||||| || |||| | ||||||||||||  ||||||  |||||||||    
T  9875629 taattaagcgcatataacataaaagctgatcatatgagtgtttatgtataagttatttctatagcaaaagaataaataaagt 9875548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 10143106 - 10143155
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||| |||| | ||||||||||||| |||||||||||| ||||||||    
T  10143106 agtgcttatgtataagttatttctataacaaaagataaaattaagtcaaa 10143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 10646396 - 10646368
Alignment:
Q  252 aaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||||||||||||||||||||    
T  10646396 aaaagataaaataaagtcaaattattttc 10646368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 13736475 - 13736443
Alignment:
Q  177 ataaacaatttaattaagcacatatagcataaa 209  Q
    ||||||||||||||||||| |||||||||||||    
T  13736475 ataaacaatttaattaagcgcatatagcataaa 13736443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Original strand, 34339869 - 34339897
Alignment:
Q  252 aaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||||||||||||||||||||    
T  34339869 aaaagataaaataaagtcaaattattttc 34339897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 5328857 - 5328957
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||| |||||||  |||||||| ||||||||||||||||| ||||||||  |||||||  ||  | ||||||||||||| ||||||||||||||||||||    
T  5328857 tttgaataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaa 5328956  T
Q  272 a 272  Q
    |    
T  5328957 a 5328957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 2514612 - 2514685
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||||| ||||||| | ||||||| |||| | | |||||||||||||||||||||||||||||||||    
T  2514612 tatagcataaatgcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaa 2514685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 10452541 - 10452436
Alignment:
Q  178 taaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatt 277  Q
    ||||||| |||||||||| | |||||||||| ||  |||||||| ||||||| |||| | | ||||||||||| |||| |||||||||| ||||| ||||    
T  10452541 taaacaacttaattaagctcttatagcataagtggctatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactatt 10452442  T
Q  278 ttcata 283  Q
    ||||||    
T  10452441 ttcata 10452436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 8420353 - 8420284
Alignment:
Q  203 gcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| ||| ||||||||| ||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  8420353 gcatatatgcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 27595684 - 27595643
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27595684 tttctataataaaagataaaataaagtcaaattattttcata 27595643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 32386731 - 32386639
Alignment:
Q  191 taagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||||| ||||||||||||||||| ||||||| |||| |   ||||||  ||| |||||||||||||| |||||||| ||||||||    
T  32386731 taagcacttatagtataaatgtttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcata 32386639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 10749347 - 10749304
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  10749347 tatttctataataaaagataaaataaagttaaattattttcata 10749304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 27889990 - 27889920
Alignment:
Q  212 tttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||| |||||| ||||||||||||| || ||||||||| || ||||| ||||||||||    
T  27889990 tttatcatatgagtgcttatgtacaagttatttctataacaacagataaaat-aattcaaactattttcata 27889920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 4325457 - 4325384
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||| ||||||| |||  | ||||||||||||||||| ||||||||| || |||| ||||||||||    
T  4325457 tgtttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcata 4325384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 27693556 - 27693515
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  27693556 tttctataatagaagataaaataaagtcaaattattttcata 27693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 19800603 - 19800523
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaa 266  Q
    |||||||||||| |||||||| |  | ||| ||| | ||||||| |||||| ||||||||||| |||||||||||||||||    
T  19800603 ttaattaagcacttatagcatgagggcttaccatgtaagtgcttatgtacaagttatttctatgataaaagataaaataaa 19800523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 30523858 - 30523918
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||| |||||||||||||| |||||||| | || | |||||||||||||||||    
T  30523858 tgtttatcatataagtgcttttgtacaagttatttccacaacagaagataaaataaagtca 30523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 10154140 - 10154215
Alignment:
Q  208 aatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| |||||||| ||||||| |||||| | | ||||||||  ||||||||||||||||||||| | ||||||||    
T  10154140 aatgtatatcatataagtgcttctgtacaagctgtttctatagaaaaagataaaataaagtcaaactgttttcata 10154215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 3217336 - 3217266
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||| |||| | | ||||| | ||| | ||||||||||||||||||||||||||||||    
T  3217336 ttatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcata 3217266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 24836320 - 24836278
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  24836320 gttatttctataacaaaagataaaataaagtcaaattgttttc 24836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 27615457 - 27615349
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttattt-ctataataaaagataaaataaagtca 270  Q
    ||||||||||||| ||||||||||  ||||  |||| |   ||||||| | ||||||||| ||  |||||||| ||||||||| ||||||||||||||||    
T  27615457 tttggataaacaaattaattaagcttatat--catagacacttatcatgtaagtgcttttata--tgttattttctataataatagataaaataaagtca 27615362  T
Q  271 aattattttcata 283  Q
    |||| ||||||||    
T  27615361 aattcttttcata 27615349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 2027991 - 2027891
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||||||| ||| ||||||| | |||| |||||||| ||||||||| ||  |||  ||| | | ||||| | || |||||||||||||||||||||    
T  2027991 tttggataaacagtttcattaagcgcttatatcataaatgcttatcatattagcacttacgtataagctatttttgtattaaaagataaaataaagtcaa 2027892  T
Q  272 a 272  Q
    |    
T  2027891 a 2027891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 6647288 - 6647373
Alignment:
Q  188 aattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatta 275  Q
    ||||||| || ||||| || | |||| ||||||||||||||| |||| | ||||||||||||| |||| ||  |||||||||||||||    
T  6647288 aattaagtacttataggatcagtgttcatcatatgagtgcttatgtataagttatttctataacaaaaaat--aataaagtcaaatta 6647373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 9027460 - 9027560
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||||||| ||||| ||||| | |||||||| ||   |||| |||| ||||||| | || | | |||||||| |||| ||||||||||||||||||    
T  9027460 tttggataaacagtttaagtaagcgcttatagcatgaacacttattatataagtgcttatctataagctatttctacaatagaagataaaataaagtcaa 9027559  T
Q  272 a 272  Q
    |    
T  9027560 a 9027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 28531687 - 28531627
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaat 273  Q
    ||||||||  |||||| ||||| | ||||||| ||||| ||||||||||||||||||||||    
T  28531687 ttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaat 28531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 32386270 - 32386190
Alignment:
Q  188 aattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagt 268  Q
    |||||||||| ||||| ||||| ||||||||||| ||||||| |||| | | ||||||  | | |||||||||||||||||    
T  32386270 aattaagcacttatagtataaaagtttatcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagt 32386190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 32975865 - 32975961
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||| ||||||||||   ||||||||||  | || |||||| |||| || |||| | ||||||||| ||| |||| ||||||||||||||||    
T  32975865 gataaacaacttaattaagcgtttatagcataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 32980492 - 32980536
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||||||||||| |||||||||||||||| || ||||||||    
T  32980492 tatttctataataaaacataaaataaagtcaaactactttcataa 32980536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 1402947 - 1402990
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  1402947 tatttctataacaaaagataaaataaagttaaactattttcata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 2027525 - 2027482
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||    
T  2027525 tatttttataacaaaagataaaataaagtcaaactattttcata 2027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 5550059 - 5550126
Alignment:
Q  216 tcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| ||||||| |||| ||  |||||| ||||||| |||||| ||||||||||||| ||||||||    
T  5550059 tcatataagtgcttatgtatatagtatttcgataataagagataacataaagtcaaattgttttcata 5550126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 9732386 - 9732469
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    |||||||||||  |||| ||||| ||||||| || | | | |||||||||| |||| |||||||| |||||||||| |||||||    
T  9732386 tatagcataaacatttaccatataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaaattgttttcat 9732469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 29274348 - 29274305
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||    
T  29274348 tatttctatagcaaaagataaaataaagtcaaattgttttcata 29274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 34405056 - 34405095
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  34405056 tatttctataataaaagttaaaataaagtcaaattgtttt 34405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 34429859 - 34429780
Alignment:
Q  190 ttaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    |||| ||| |||||||||| |||||||  ||  |||| || |||| | |||||||||||||||| |||||||||||||||    
T  34429859 ttaatcacttatagcataagtgtttattgtactagtgattatgtataagttatttctataataagagataaaataaagtc 34429780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 323745 - 323805
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||| ||||||| | | |||||||||| |||||||||||||||| ||||| | ||||||||    
T  323745 agtggttttgtataagctatttctatattaaaagataaaataaattcaaactgttttcata 323805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 741055 - 740953
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtaca---tgttatttctataataaaagataaaataaagt 268  Q
    ||||||||||||||||||||| |  | | ||||| ||  ||||||||||| | ||||| |||| |   | || ||||||||| |||||||||||||||||    
T  741055 tttggataaacaatttaattacgtgcctgtagcagaagcgtttatcatataaatgcttatgtataagctattttttctataacaaaagataaaataaagt 740956  T
Q  269 caa 271  Q
    |||    
T  740955 caa 740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 781336 - 781364
Alignment:
Q  240 tatttctataataaaagataaaataaagt 268  Q
    |||||||||||||||||||||||||||||    
T  781336 tatttctataataaaagataaaataaagt 781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 2205687 - 2205643
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||| || ||||||||||| ||||||||||| |||||||||    
T  2205687 tatttctaaaacaaaagataaaacaaagtcaaattgttttcataa 2205643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 3155059 - 3155159
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||| |||||| | ||||||||||  ||||||||||| | || || |||| | | ||| ||| | | ||||||||||| ||||||||    
T  3155059 tttggataaacaacttatttaagcgcttatagcataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaa 3155158  T
Q  272 a 272  Q
    |    
T  3155159 a 3155159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 3204658 - 3204618
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  3204658 ttctataataaaagataaaataaagtcgaactgttttcata 3204618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 7713983 - 7714019
Alignment:
Q  247 ataataaaagataaaataaagtcaaattattttcata 283  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcata 7714019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 11340741 - 11340701
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||| ||||||||||||||||| || |||||||||||    
T  11340741 ttctataacaaaagataaaataaagttaatttattttcata 11340701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 29940749 - 29940789
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||| |||||||||||||||||||| || |||||||    
T  29940749 tttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 30784510 - 30784550
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  30784510 tttctataacaaaagataaaataaagtcaaactactttcat 30784550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 30865433 - 30865465
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||| |||||||||||||||||||||    
T  30865433 tatttctataacaaaagataaaataaagtcaaa 30865465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 31583652 - 31583696
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| || ||||||||| |||||||||| |||||||||    
T  31583652 tatttctataacaagagataaaatgaagtcaaattgttttcataa 31583696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 54775011 - 54775111
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||| |||||||  |||||||| ||||||||||||||||| ||||||||  |||||||  ||  | ||||||||||||| ||||||||||||||||||||    
T  54775011 tttgaataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaa 54775110  T
Q  272 a 272  Q
    |    
T  54775111 a 54775111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 283
Target Start/End: Complemental strand, 21862359 - 21862251
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaata-aagtcaaatt 274  Q
    ||||||||| | |||||||||| ||||||||||| ||||||| ||| |||||||  ||| | | | ||||||| | ||||||||||||| ||||||||||    
T  21862359 gataaacaactcaattaagcacttatagcataaacgtttatcttataagtgcttgcgtataagctgtttctattacaaaagataaaatacaagtcaaatt 21862260  T
Q  275 attttcata 283  Q
     ||||||||    
T  21862259 gttttcata 21862251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 39971202 - 39971314
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||| |||||||||||||||| | |||| ||| ||   ||||||||| ||||||| |||| | |||| || ||||| |||||||||||||||| |||    
T  39971202 tttggattaacaatttaattaagctcttataacatcaacacttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaa 39971301  T
Q  272 attattttcataa 284  Q
    ||| |||| ||||    
T  39971302 attgttttaataa 39971314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 1395622 - 1395665
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  1395622 tatttctataacaaaagataaaataaagtcaaattattttcata 1395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 283
Target Start/End: Original strand, 32703025 - 32703132
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatta 275  Q
    ||||||||| ||| |||||| |||||||||||    |||||||||| | || || |||| | | ||||||||| ||||||||||||||||| |||||||     
T  32703025 gataaacaacttagttaagcgcatatagcatatccatttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattg 32703124  T
Q  276 ttttcata 283  Q
    ||||||||    
T  32703125 ttttcata 32703132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 25195377 - 25195418
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  25195377 tttctataacaaaagataaaataaagtcaaattattttcata 25195418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 16790503 - 16790431
Alignment:
Q  212 tttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||||| ||||||| |||| | | ||||| ||||| || |||||||||||| |||||||||||||||||    
T  16790503 tttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcataa 16790431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 283
Target Start/End: Original strand, 38462167 - 38462275
Alignment:
Q  175 ggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatt 274  Q
    |||||||||| |||||||||| | || ||||||||   ||||||||| |||| || | || | | ||||||||||  ||||||||||||||||||||| |    
T  38462167 ggataaacaagttaattaagcgcctaaagcataaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaact 38462266  T
Q  275 attttcata 283  Q
     ||||||||    
T  38462267 gttttcata 38462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 41029011 - 41028939
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||| |||||| ||||||||| ||||||| |||| | | ||||||||||| |||||| |||||||||||||    
T  41029011 tatagcttaaatgcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 16790248 - 16790181
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaa 266  Q
    ||||||||||  ||||||||||| ||||||| | || | ||||||||||||| |||||||||||||||    
T  16790248 tatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 26990685 - 26990728
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaattcttttcata 26990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 43116615 - 43116504
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||| ||    ||||||||||||||||||||||  |||| || |||  | | ||||||||||| |||||||||||| || ||||    
T  43116615 tttggataaacaacttaatttagtgtttatagcataaatgtttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaa 43116516  T
Q  272 attattttcata 283  Q
    |  |||||||||    
T  43116515 acaattttcata 43116504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 20874487 - 20874433
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtg 226  Q
    ||||||||||||| |||||||||||| |||||||||||||  |||||||| ||||    
T  20874487 tttggataaacaacttaattaagcacttatagcataaatgcatatcatataagtg 20874433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 44374790 - 44374720
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||| |||| | | ||| ||| ||| ||||||||||||||||||||||| ||||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 10101597 - 10101552
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  10101597 gttatttctataacaaaagataaaataaagttaaattgttttcata 10101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 10212522 - 10212477
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  10212522 gttatttctataacaaaagataaaataaagttaaattgttttcata 10212477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 20143874 - 20143918
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  20143874 gttatttctataataaaagataaaat-aagtcaaactattttcata 20143918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 23269315 - 23269271
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  23269315 gttatttctataataaaagataaaat-aagtcaaactattttcata 23269271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 48323770 - 48323811
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  48323770 gttatttctataataaaagataatataaagtcaaattgtttt 48323811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 48397595 - 48397636
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  48397595 gttatttttataataaaagataaaataaagtcaaattgtttt 48397636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 53736234 - 53736189
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  53736234 gttatttctataacaaaagataaaataatgtcaaactattttcata 53736189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 27792794 - 27792866
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||| |||| | | |||||| | || |||||||||||||| |||||| ||||||||||    
T  27792794 gtttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcata 27792866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 33882978 - 33883018
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  33882978 ttatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 48365000 - 48364956
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||    
T  48365000 gttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 49845708 - 49845601
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||||| |||||||||||| |||| ||||||||  ||| |||| | |  || |||  | | ||||||||||||||| || ||||||||||||    
T  49845708 atttggataaacaaattaattaagcacttataacataaatgcctattatataattatttatgt-taggctatttctataataaatgagaaaataaagtca 49845610  T
Q  271 aattatttt 279  Q
    |||| ||||    
T  49845609 aattgtttt 49845601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 15304466 - 15304423
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  15304466 tatttctataacaaaagataaaataaagttaaattgttttcata 15304423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 23785136 - 23785238
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatga--gtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    |||| |||||||| |||||||||  | ||||||||||||||||||||||| |   ||||| || | | |||||||||| |  | ||||||||||||||||    
T  23785136 tttgcataaacaacttaattaagtgcttatagcataaatgtttatcatataaatatgcttatgcataagttatttctacagcagaagataaaataaagtc 23785235  T
Q  270 aaa 272  Q
    |||    
T  23785236 aaa 23785238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 32064364 - 32064435
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||| ||||||  |||| | ||| |||||| || |||| ||||||||||||||||||||||| ||||    
T  32064364 ttatcatattagtgctaatgtataagttctttctaaaacaaaaaataaaataaagtcaaattatttttataa 32064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 49587035 - 49586992
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||    
T  49587035 tatttctataacaaaagataaaataaagtcaaactgttttcata 49586992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 3182508 - 3182438
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| | |||| || |||| | |||| |||||||  ||||||||||||||||||||||| ||||||||    
T  3182508 ttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 6241201 - 6241159
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||    
T  6241201 tttctataacaaaagttaaaataaagtcaaactattttcataa 6241159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 33307726 - 33307656
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||| |||| | | ||||||  ||| |||| || ||||||||||||||||||||||||    
T  33307726 ttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcata 33307656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 10357382 - 10357427
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| |||||||||||||| || ||||| ||||||||    
T  10357382 gttatttctataacaaaagataaaataatgttaaatttttttcata 10357427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 279
Target Start/End: Complemental strand, 23326276 - 23326243
Alignment:
Q  246 tataataaaagataaaataaagtcaaattatttt 279  Q
    |||||||| |||||||||||||||||||||||||    
T  23326276 tataataagagataaaataaagtcaaattatttt 23326243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 23952227 - 23952186
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  23952227 gttatttctataacaaaagataaaattaagtcaaagtatttt 23952186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 28283725 - 28283652
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| ||||||| || | | |||| |||||||| ||||||||||   |||||||| |||||||||||    
T  28283725 gtttatcatataagtgcttatgcataagttacttctataacaaaagataaatgtaagtcaaactattttcataa 28283652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 40122900 - 40122827
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||| ||| ||| ||| |||| | | |||||| |||| ||||||||||||||||||||| | |||||||||    
T  40122900 gtttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataa 40122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 53457335 - 53457372
Alignment:
Q  247 ataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  53457335 ataacaaaagataaaataaagtcaaactattttcataa 53457372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 3364926 - 3364962
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataa 208  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  3364926 tttggataaacaacttaattaaacacatatagcataa 3364962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 24235804 - 24235764
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattt 278  Q
    ||||||||||||| ||||||||| ||||||||||| |||||    
T  24235804 gttatttctataacaaaagataatataaagtcaaactattt 24235764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 32069100 - 32069139
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattt 278  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  32069100 gttatttctataa-aaaagataaaataaagtcaaataattt 32069139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 32555088 - 32555060
Alignment:
Q  252 aaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||||||||||||||||||||    
T  32555088 aaaagataaaataaagtcaaattattttc 32555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 35394820 - 35394792
Alignment:
Q  240 tatttctataataaaagataaaataaagt 268  Q
    |||||||||||||||||||||||||||||    
T  35394820 tatttctataataaaagataaaataaagt 35394792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 12835124 - 12835013
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| || ||||||| | |||| |||||| | ||| | ||||||||||| || | ||| |||||||| || ||||||||||||||||||||    
T  12835124 tttggataaacaacttgattaagcgcttataacataaacgcttagcgtatgagtgcttatgcagatgctatttctacaacaaaagataaaataaagtcaa 12835025  T
Q  272 attattttcata 283  Q
    ||| ||||||||    
T  12835024 attgttttcata 12835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 8680878 - 8680986
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||  | |||||| ||| ||||||||| |||||||||||| ||||  || |||| | ||||||| | ||| |||||||| |||||||||||    
T  8680878 tttggataaacagctcaattaaacacttatagcatagatgtttatcata-gagt--ttatgtataagttatttttgtaacaaaagatataataaagtcaa 8680974  T
Q  272 attattttcata 283  Q
    ||||||||||||    
T  8680975 attattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 2223032 - 2223138
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||||||||| |||  ||||||||||||  ||||| ||| |||| || |||| | | ||||||||||| ||||||||||  ||||||||    
T  2223032 tttggataaacaatttaattaggcatttatagcataaat-cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaa 2223130  T
Q  272 attatttt 279  Q
    ||| ||||    
T  2223131 attgtttt 2223138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 49060423 - 49060530
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||| ||||||  |||||||||||| ||||| ||||  | ||||||||| |||  || |||| | | ||||||||||| |||| |||||||||||||||    
T  49060423 tttgggtaaacagcttaattaagcacttatagtataatggcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T
Q  272 attatttt 279  Q
    ||||||||    
T  49060523 attatttt 49060530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 39591588 - 39591543
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  39591588 gttatttctataacaaaagataaaataaagtcaaattgttttcata 39591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 27481481 - 27481381
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||||||| |  | |||||||||||||||||| |||| |||| || |||| | | ||||||||||| ||| |||||||  |||||||    
T  27481481 tttggataaacaacttaattaggtgcttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaa 27481382  T
Q  272 a 272  Q
    |    
T  27481381 a 27481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 5010655 - 5010548
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||||| |||||| | |||||||||||  |||||||||  ||   || ||| || ||||||| | ||| |||| |||||||||||| ||    
T  5010655 tttggataaacaatttatttaagcgcttatagcataaacatttatcatacaagaagttatgtgcaagttatttatgtaacaaaatataaaataaagtgaa 5010556  T
Q  272 attatttt 279  Q
    ||||||||    
T  5010555 attatttt 5010548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 5269480 - 5269519
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattattt 278  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  5269480 ttatttctttaataaaagataaaataaagtcaaattattt 5269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 6552456 - 6552365
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaata 264  Q
    |||||||| ||| |||||||| ||| || | ||||| |  ||||||||| ||||||| |||||| |||||||||| || |||||||||||||    
T  6552456 ttggataagcaacttaattaaacacttaaatcataagtacttatcatataagtgcttatgtacaagttatttctacaacaaaagataaaata 6552365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 27121705 - 27121662
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  27121705 tatttctataataaatgataaaataaagtcaaattgttttcata 27121662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 47003978 - 47004077
Alignment:
Q  180 aacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||| |||||||||  | ||||||| ||||||||||||||| |||| || | |  | | ||||||||||| || |||||||||||||||||| ||||||    
T  47003978 aacaacttaattaagtgcttatagcaaaaatgtttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttt 47004077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 1431468 - 1431394
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaat 273  Q
    |||||||||| || ||||||||| |||| || |||| | |||||||| ||||| ||| |||||||||||||||||    
T  1431468 tatagcataagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaat 1431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 22388091 - 22387979
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaa---ataaagt 268  Q
    ||||||||||||| |||||||||| | |||| ||||||   ||||||| | ||||||| || | | | ||||||||||| ||||||||||   |||||||    
T  22388091 tttggataaacaacttaattaagcgcttataacataaacacttatcatttaagtgcttatggataagctatttctataacaaaagataaaagtataaagt 22387992  T
Q  269 caaattattttca 281  Q
    |||||| ||||||    
T  22387991 caaattcttttca 22387979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 22759067 - 22759180
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataa--atgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    ||||||||||||| |||||||||||| ||||| ||||  || |||||||||| || | || |||  | | ||||| ||||| ||||||||||||||||      
T  22759067 tttggataaacaacttaattaagcacttatagtataaacatttttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaagga 22759166  T
Q  270 aaattattttcata 283  Q
    ||||| ||||||||    
T  22759167 aaattgttttcata 22759180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 991991 - 992064
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||| |||||||  ||| | ||| ||||||||| |||| ||||||||||| |||| ||||||||||    
T  991991 tgtttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcata 992064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 3501079 - 3501042
Alignment:
Q  246 tataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||||||||||||||||| |||||||||    
T  3501079 tataataaaagataaaataaagtcaaatcattttcata 3501042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 753391 - 753291
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||||||    |||||||||||  |||||||||| || |||| |||| |   ||||||||||| |||| || ||||||||||||    
T  753391 tttggataaacaacttaattaagtgtttatagcataaacatttatcatataagcgcttgtgtatacactatttctataacaaaatatgaaataaagtcaa 753292  T
Q  272 a 272  Q
    |    
T  753291 a 753291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 5373149 - 5373205
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtc 269  Q
    ||||||| | ||||||| |||| ||| ||||||||||| ||||||||||||||||||    
T  5373149 ttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 7244625 - 7244697
Alignment:
Q  212 tttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||||||| ||||||| |||| | | ||||||||||  ||||||||||| ||||||||| | |||||||||    
T  7244625 tttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcataa 7244697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 8445183 - 8445275
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattt 278  Q
    |||||||||  | |||||||| | |||||||||||| ||||||| | || | | ||||| ||||| |||||||||||||||| ||||| ||||    
T  8445183 ttaattaagtgcgtatagcattagtgtttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 8445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 24973870 - 24973938
Alignment:
Q  215 atcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||||||| |||| | | ||||||||||| ||||||||||||||| ||||||| ||| ||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccata 24973938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 31341077 - 31341177
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| ||||| |||| | ||| ||||||  | ||||||| | | ||||| |||| | | ||||| ||||| ||||||||||||||||||||    
T  31341077 tttggataaacaacttaatcaagcgcttattgcataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaa 31341176  T
Q  272 a 272  Q
    |    
T  31341177 a 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 46825052 - 46825092
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  46825052 ttctataaaaaaagataaaataaagtcaaattgttttcata 46825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 48157240 - 48157200
Alignment:
Q  239 ttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  48157240 ttatttctataataaaagataaaataaagtgaaattgtttt 48157200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 1417215 - 1417258
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  1417215 tatttatataacaaaagataaaataaagtcaaattgttttcata 1417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 3802258 - 3802215
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||    
T  3802258 tatttctataataaaaggtaaaataaagtcaaatcgttttcata 3802215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 28178920 - 28178963
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  28178920 tatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 30456569 - 30456526
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||| || ||||||||||||||||||||||| ||||||||    
T  30456569 tatttctaaaacaaaagataaaataaagtcaaattgttttcata 30456526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 33894507 - 33894616
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||||||| |||  | |||  ||| |||||| ||||| | ||||||| |||| | | ||||||||||| |||||||||||| |||||||    
T  33894507 tttggataaacaatttaat-aagtgcttatgacatgaatgttcatcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaa 33894604  T
Q  272 attattttcata 283  Q
    | | ||||||||    
T  33894605 actgttttcata 33894616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 35536058 - 35536101
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||    
T  35536058 tatttctataacataagataaaataaagtcaaattgttttcata 35536101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 40689105 - 40689062
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||    
T  40689105 tatttctatagcaaaagataaaataaagttaaattattttcata 40689062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 42656466 - 42656505
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  42656466 tatttctataacaaaagataaaataaagtcaaatcatttt 42656505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 47046231 - 47046184
Alignment:
Q  236 atgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||| || ||| ||||||||||||||||||| ||||||||    
T  47046231 atgttatttctacaacaaaggataaaataaagtcaaattgttttcata 47046184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 5499350 - 5499296
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtg 226  Q
    |||||||||||||||||||||| ||| ||| ||| || || ||||||||||||||    
T  5499350 tttggataaacaatttaattaaccacttatggcaaaagtgcttatcatatgagtg 5499296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 15328557 - 15328590
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaat 273  Q
    ||||||||||||||||||||||||||||| ||||    
T  15328557 tatttctataataaaagataaaataaagttaaat 15328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 23918906 - 23918951
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||| ||||| | ||||||||||||||||||||||| ||||||||    
T  23918906 gttatctctattacaaaagataaaataaagtcaaattgttttcata 23918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 25511528 - 25511609
Alignment:
Q  190 ttaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||| | ||||||||| | | ||||||||| |||| | ||||| |  |||||||||||| ||||||| ||||||||||||    
T  25511528 ttaagctcttatagcatacaagcttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaa 25511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 26024113 - 26024072
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  26024113 gttatttctattatataagatgaaataaagtcaaattatttt 26024072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 26935723 - 26935626
Alignment:
Q  186 ttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| | |||| |||||  | ||||||||| |||||||||||  | | ||||| ||||| ||| |||||||||| || ||||| ||||||||    
T  26935723 ttaattaagcgcttataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 26935626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 30751438 - 30751511
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||| ||||||| || | |   ||||| | ||| |||| |||||||||||||||||||||||||||    
T  30751438 tgtttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcata 30751511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 39505839 - 39505940
Alignment:
Q  171 atttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||||||||||  | |||||||||  ||||||||||||||||||||  | |||| || |||| | ||||||| | ||  ||||||| ||||| |||||    
T  39505839 atttggataaacagctcaattaagcatttatagcataaatgtttatcaagtaagtgtttatgtataagttatttttgtagcaaaagattaaatagagtca 39505938  T
Q  271 aa 272  Q
    ||    
T  39505939 aa 39505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 2999142 - 2999174
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||| |||||||||||||||||||||    
T  2999142 tatttctataacaaaagataaaataaagtcaaa 2999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Original strand, 3635928 - 3635956
Alignment:
Q  252 aaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||||||||||||||||||||    
T  3635928 aaaagataaaataaagtcaaattattttc 3635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 28165025 - 28165081
Alignment:
Q  223 agtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattatttt 279  Q
    ||||||| |||| | ||| ||||||||| |||||||||||| |||||||||| ||||    
T  28165025 agtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgtttt 28165081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 28702640 - 28702676
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataa 208  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  28702640 tttggataaacaacttaattaagcacttatagcataa 28702676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 30496655 - 30496695
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  30496655 tatttctataacaaaatataaaataaagtcaaattgttttc 30496695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 36532307 - 36532343
Alignment:
Q  245 ctataataaaagataaaataaagtcaaattattttca 281  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  36532307 ctataacaaaagataaaacaaagtcaaattattttca 36532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 36598508 - 36598432
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctat 248  Q
    ||||||||||||| ||||||||| || ||  |||||| |||||||||||| |||| || |||| | | |||||||||    
T  36598508 tttggataaacaacttaattaagaacttacggcataagtgtttatcatattagtgtttatgtataagctatttctat 36598432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 39362027 - 39362063
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataa 208  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  39362027 tttggataaacattttaattaagcacttatagcataa 39362063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 41875868 - 41875908
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattt 278  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  41875868 gttatttctgtactaaaagataaaataaggtcaaattattt 41875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 45593867 - 45593795
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| | ||||| |||| | | ||||||| ||| |||| |||||||||||||||| | ||||||||    
T  45593867 gtttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcata 45593795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 283
Target Start/End: Complemental strand, 5219683 - 5219576
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatta 275  Q
    |||||||||  |||||||| || |||| ||||| || ||||||||| ||||||  |||| ||| ||| ||||||||||||||||||||||||| ||| ||    
T  5219683 gataaacaacataattaagaacttataacataattgattatcatataagtgctcatgtatatgctatctctataataaaagataaaataaagttaaacta 5219584  T
Q  276 ttttcata 283  Q
    ||||||||    
T  5219583 ttttcata 5219576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 7749269 - 7749162
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||| ||||| | |||||||||| |||||| ||||| |||| || |||| | | |||||||||||||||||| |||||||| || |    
T  7749269 tttggataaacaacttaactaagctcttatagcataagtgtttaccatataagtgtttatgtatacgctatttctataataaaagagaaaataaaatcga 7749170  T
Q  272 attatttt 279  Q
    | ||||||    
T  7749169 actatttt 7749162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 49219063 - 49219133
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||||||| ||  ||| | ||||||||||||| |||| |||||||||||||||||||||||||||    
T  49219063 ttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcata 49219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 4071833 - 4071876
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaattattttcata 4071876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 11785165 - 11785272
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    |||||||| |||  |||||||||||| ||||| ||||  ||||||||| | |||| |  |||||| || |||||||||| ||||||| ||||||||||||    
T  11785165 tttggatagacagcttaattaagcacgtatagtataagagtttatcatttaagtgataatgtacaagtgatttctataacaaaagatgaaataaagtcaa 11785264  T
Q  272 attatttt 279  Q
    | ||||||    
T  11785265 actatttt 11785272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 24193468 - 24193579
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||||| ||||| ||||||||||| | ||||||||| ||| ||| |||| | ||||||| || || |||| |||||| | ||| ||    
T  24193468 tttggataaacaacttaattgagcacttatagcataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaa 24193567  T
Q  272 attattttcata 283  Q
    | ||||||||||    
T  24193568 actattttcata 24193579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 485964 - 486073
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaat-aaagtca 270  Q
    ||||||| ||| | |||||||||| | ||||||||||  | ||||||||  ||||||| |||| ||| |||||||| || |||||||||||| |||||||    
T  485964 tttggatgaactacttaattaagcgcttatagcataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaagtca 486063  T
Q  271 aattattttc 280  Q
    |||| |||||    
T  486064 aattgttttc 486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 23676599 - 23676707
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataat-aaaagataaaataaagtca 270  Q
    |||||||||||||||||| ||||  | |||||| |||||| || |||||| |||||||||||| |   ||||| || ||| ||||||||||||||||||     
T  23676599 tttggataaacaatttaactaagtgcttatagcttaaatgcttgtcatataagtgcttttgtataatctatttatacaataaaaagataaaataaagtcg 23676698  T
Q  271 aattatttt 279  Q
    || ||||||    
T  23676699 aactatttt 23676707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 30024622 - 30024694
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||| ||| ||| || | | ||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  30024622 gtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcata 30024694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 4191661 - 4191740
Alignment:
Q  211 gtttatcatatgagtgcttttgtacatgttatttctataataaaagat-aaaataaagtcaaattattttcataatttat 289  Q
    ||||||||||| ||||||| |||| | | ||||||||||| ||||||| |||||||||||||| | ||||||||| ||||    
T  4191661 gtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcataagttat 4191740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 11917506 - 11917553
Alignment:
Q  236 atgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  11917506 atgttatttttgtaacaaaagataaaataaagtcaaattattttcata 11917553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 27672018 - 27671919
Alignment:
Q  173 ttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||||| ||||||| | | | |||||||||| ||  |||| ||| ||||||| |||| | |||||||| | || |||||||||||||||||||||    
T  27672018 ttggataaacattttaattcatcgcttatagcataagtgactatcttataagtgcttgtgtataagttatttccacaacaaaagataaaataaagtcaaa 27671919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 20936121 - 20936079
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  20936121 tatttctataacaaaagataaaataaagtcaaactattttcat 20936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 1404373 - 1404414
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttca 281  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  1404373 tatttctataataaaagataaaataaggtcaaattgttttca 1404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 8130127 - 8130168
Alignment:
Q  242 tttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  8130127 tttctataacaaaagataacataaagtcaaattattttcata 8130168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 31038988 - 31038943
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||    
T  31038988 gttatttctacaataatagataaaataaagtcaaattgttttcata 31038943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 35743246 - 35743299
Alignment:
Q  231 tgtacatgttatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    |||||| ||||||||||||| |||||||||||||||| |||| || ||||||||    
T  35743246 tgtacaagttatttctataacaaaagataaaataaaggcaaactactttcataa 35743299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  216 tcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttca 281  Q
    |||||| ||||||| |||| | | ||||||||||| |||||||||||| |||||||| ||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 7022619 - 7022663
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  7022619 tatttttataagaaaagataaaatagagtcaaattattttcataa 7022663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 9680615 - 9680658
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||| |||||||||||||||||||||||||||| || |||||    
T  9680615 tatttcgataataaaagataaaataaagtcaaattgttctcata 9680658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 19422342 - 19422401
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||||||| | ||||| |||| | ||||||||||||| |||||||| ||||||||||||    
T  19422342 ttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaa 19422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 32724070 - 32724113
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||    
T  32724070 tatttctattacaaaagataaaataaagtcaaactattttcata 32724113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 36734816 - 36734887
Alignment:
Q  212 tttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||| ||||||| |||| |   | ||||||||| ||||| ||||||||||||||| ||||||||||    
T  36734816 tttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcata 36734887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 51556047 - 51555956
Alignment:
Q  179 aaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    |||||| ||||| |||||| |||| |||||   |||||||||| ||||||| |||| | | ||||  ||||| |||||||||||||||||||    
T  51556047 aaacaacttaataaagcacttataacataaccatttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 52735073 - 52735116
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||    
T  52735073 tatttctgtaacaaaagataaaataaagtcaaattactttcata 52735116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 7029374 - 7029416
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||    
T  7029374 tatttctataagaaaagataaaatagagtcaaattgttttcat 7029416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 8423024 - 8422926
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtca 270  Q
    ||||||||||||| |||||||||    ||||||||||   | ||||||||  |||||| |||| | | ||||| ||||| |||||||||||||||||||    
T  8423024 tttggataaacaacttaattaagtgtttatagcataatcatgtatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtca 8422926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 262
Target Start/End: Original strand, 11698846 - 11698936
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaa 262  Q
    |||||| | |||| |||||||| ||| |||||||||   ||||||||||| |||| ||||||| | || |||||||||| |||||| ||||    
T  11698846 tttggacagacaacttaattaaccacgtatagcatacgagtttatcatataagtgattttgtataagtgatttctataaaaaaagagaaaa 11698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 22684662 - 22684592
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| | ||||| |||| | | ||||||||||| ||| | ||||||||||||||||| ||||||||    
T  22684662 ttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcata 22684592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 30770834 - 30770872
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattt 278  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  30770834 tatttttataataaaagataaaataaagttaaattattt 30770872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 43932316 - 43932378
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgta 234  Q
    ||||||||||||  |||||||||||| |||| ||||| |||||||||||  ||||||| ||||    
T  43932316 tttggataaacagattaattaagcacttataacataagtgtttatcatacaagtgcttatgta 43932378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 54325183 - 54325113
Alignment:
Q  213 ttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||| ||||||| |||| |   ||||||||| | ||||||||||||||||||||| | ||||||||    
T  54325183 ttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcata 54325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8469564 - 8469507
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgctt 229  Q
    |||||||||||| | |||||||||||  | |||||||||| ||||||||| |||||||    
T  8469564 tttggataaacagtataattaagcactcacagcataaatgcttatcatataagtgctt 8469507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 51044578 - 51044533
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaa-ttattttcataa 284  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||    
T  51044578 tatttctataacaaaagataaaataaagtcaaacttgttttcataa 51044533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 4193557 - 4193665
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||||||| |||||| | || | |||||||| || ||||||  | ||||  ||| | |||||||||| | ||||||| |||||||| | ||    
T  4193557 tttggataaacaatttacttaagcgcttaaaacataaatgcttttcatatatgcgcttgggtataagttatttctaaagtaaaagagaaaataaaataaa 4193656  T
Q  272 attattttc 280  Q
    ||| |||||    
T  4193657 attgttttc 4193665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 9843371 - 9843332
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttc 280  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  9843371 tatttctataataaa-gattaaataaagtcaaattattttc 9843332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 23815319 - 23815363
Alignment:
Q  238 gttatttctataataaaagataaaataaagtcaaattattttcat 282  Q
    ||||||||||||| |||||||||||||| |||||| | |||||||    
T  23815319 gttatttctataacaaaagataaaataatgtcaaactgttttcat 23815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 24929444 - 24929488
Alignment:
Q  240 tatttctataataaaagataaaataaagtcaaattattttcataa 284  Q
    ||||||||||| |||||||||||||||||| || | |||||||||    
T  24929444 tatttctataacaaaagataaaataaagtctaactgttttcataa 24929488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 35533321 - 35533281
Alignment:
Q  245 ctataataaaagataaaataaagtcaaattattttcataat 285  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  35533321 ctattataaaagataaattaaagtcaaattgttttcataat 35533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 27459 - 27570
Alignment:
Q  172 tttggataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaa 271  Q
    ||||||||||||| |||| ||| | | ||||||||||    ||||||| | ||||||| |||| | ||||||||||||| | ||||||||||||||||||    
T  27459 tttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaa 27558  T
Q  272 attattttcata 283  Q
    ||| ||||||||    
T  27559 attgttttcata 27570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 34110 - 34073
Alignment:
Q  246 tataataaaagataaaataaagtcaaattattttcata 283  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34110 tataataaaagataaaataaagtcaaattattttcata 34073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 42504 - 42592
Alignment:
Q  176 gataaacaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaata 264  Q
    ||||||||| |||||||| ||| ||||||| | |  |||||||||| ||||||| |||| | || |||||||||| |||||||||||||    
T  42504 gataaacaacttaattaaacacttatagcagacacatttatcatataagtgcttatgtataagtcatttctataacaaaagataaaata 42592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 9935 - 9862
Alignment:
Q  199 tatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    ||||| ||||||| |||||||||  |||||| |||| | ||||||||||||| |||| ||||||| ||||||||    
T  9935 tatagaataaatgcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaa 9862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4864 - 4955
Alignment:
Q  181 acaatttaattaagcacatatagcataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaa 272  Q
    |||| |||||||||| | |||||||||||||| |||||||| ||||| | | || | | |||||||||||||| | |||||| ||| |||||    
T  4864 acaacttaattaagcgcttatagcataaatgtctatcatataagtgcctatatataagctatttctataataatatataaaacaaattcaaa 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 69061 - 69019
Alignment:
Q  241 atttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||||  |||| |||||||||||||||||||||||||||    
T  69061 atttctataccaaaatataaaataaagtcaaattattttcata 69019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 1840 - 1800
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||| ||||||||||||||||| || |||||||||||    
T  1840 ttctataacaaaagataaaataaagttaatttattttcata 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 3930 - 3890
Alignment:
Q  243 ttctataataaaagataaaataaagtcaaattattttcata 283  Q
    |||||||| ||||||||||||||||| || |||||||||||    
T  3930 ttctataacaaaagataaaataaagttaatttattttcata 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 10157 - 10129
Alignment:
Q  252 aaaagataaaataaagtcaaattattttc 280  Q
    |||||||||||||||||||||||||||||    
T  10157 aaaagataaaataaagtcaaattattttc 10129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 63434 - 63366
Alignment:
Q  210 tgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaattattt 278  Q
    |||||||||||| ||||||| | || | | ||||| ||||| |||||||||||||||| ||||| ||||    
T  63434 tgtttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 63366  T

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