View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19254_low_8 (Length: 248)
Name: NF19254_low_8
Description: NF19254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19254_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 47253146 - 47252931
Alignment:
| Q |
18 |
aaaccaataaggtaacaattctattatagaaaagaggattcatgtcaaacatagctgttttattaataaataaaagacagagtaattgtttgatttgact |
117 |
Q |
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| T |
47253146 |
aaaccaataaggtaacaattctattaaagaaaagaggattcatgtcaatcatagctgttttattaataaataaaagacagagtaattgtttgatttgact |
47253047 |
T |
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| Q |
118 |
aagatccaagttagtgtgcacgaaataaactgagctggatctggatgttttgtgaaggactgaaattaggtggatttttaataataatgttctttaccta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47253046 |
aagatccaagttagtgtgcacgaaataaactgagctggatctggatgttttgtgaaggactgaaattaggtggatttttaataataatgttctttaccta |
47252947 |
T |
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| Q |
218 |
aatcaaatgtcatatt |
233 |
Q |
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|||||||||||||||| |
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| T |
47252946 |
aatcaaatgtcatatt |
47252931 |
T |
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