View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19255_high_14 (Length: 251)
Name: NF19255_high_14
Description: NF19255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19255_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 30607493 - 30607357
Alignment:
| Q |
1 |
cctatcggtgttttaaaaaacgaaccgacatgttcaactgatttagttgagaatcagtctatttaactgattattataatctcatttgaatcagagttta |
100 |
Q |
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| T |
30607493 |
cctatcggtgttttaaaaatcgaaccgacatgttcaactgatttagttgagaatcagtctatttaaccgattattataatctcatttaaatcagagttta |
30607394 |
T |
|
| Q |
101 |
gtcgaacatgaaaatcaaattggggttgaataaacca |
137 |
Q |
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|||||||||||||||| ||||||||||||||||||| |
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| T |
30607393 |
gtcgaacatgaaaatcggattggggttgaataaacca |
30607357 |
T |
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