View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19255_low_17 (Length: 236)
Name: NF19255_low_17
Description: NF19255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19255_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14680123 - 14680005
Alignment:
| Q |
1 |
ttctctacttttcttgttaaaccaaatctatggtgttgtcctgtcaattcactgtttaattagtgaattgattgcttgaatatgaatccacatgcttctc |
100 |
Q |
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| T |
14680123 |
ttctctacttttcttgttaaaccaaatctatggtgttgtcctgtcaattcactgtttaattagtgaattgattgcttgaatatgaatccccatgcttctc |
14680024 |
T |
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| Q |
101 |
taatctagaaataatcatt |
119 |
Q |
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||||||||||||||||||| |
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| T |
14680023 |
taatctagaaataatcatt |
14680005 |
T |
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