View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19256_low_11 (Length: 364)
Name: NF19256_low_11
Description: NF19256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19256_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 32640788 - 32641088
Alignment:
| Q |
45 |
tgtagtaacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
144 |
Q |
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| T |
32640788 |
tgtagttacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
32640887 |
T |
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| Q |
145 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatattgacgatccggttgcacttcttcattgtaggggactcaaattaaca |
244 |
Q |
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| T |
32640888 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatatttacgatccggttgcacttcttcattgtaggggactcaaattaaca |
32640987 |
T |
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| Q |
245 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcagagtgatcttattgagatcctg |
344 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32640988 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcaaagtgatcttattgagatcctg |
32641087 |
T |
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| Q |
345 |
c |
345 |
Q |
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| T |
32641088 |
c |
32641088 |
T |
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