View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19256_low_4 (Length: 587)

Name: NF19256_low_4
Description: NF19256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19256_low_4
NF19256_low_4
[»] chr7 (34 HSPs)
chr7 (18-284)||(4903050-4903317)
chr7 (18-277)||(4906435-4906694)
chr7 (402-580)||(19830418-19830596)
chr7 (403-580)||(37786766-37786943)
chr7 (404-580)||(19590525-19590701)
chr7 (401-578)||(2659211-2659388)
chr7 (403-580)||(38858642-38858819)
chr7 (407-580)||(29100220-29100393)
chr7 (402-578)||(35289272-35289448)
chr7 (404-578)||(32004985-32005159)
chr7 (407-580)||(4641443-4641616)
chr7 (402-578)||(34534162-34534338)
chr7 (401-564)||(19590909-19591073)
chr7 (410-573)||(23953105-23953268)
chr7 (402-573)||(4478076-4478247)
chr7 (401-564)||(38859025-38859189)
chr7 (18-190)||(4923924-4924099)
chr7 (402-564)||(2658837-2659000)
chr7 (402-564)||(34533789-34533952)
chr7 (402-563)||(32004612-32004774)
chr7 (401-562)||(37787153-37787315)
chr7 (18-186)||(5822946-5823114)
chr7 (417-564)||(29099863-29100011)
chr7 (404-520)||(35288903-35289019)
chr7 (401-544)||(38160948-38161091)
chr7 (402-542)||(28583437-28583577)
chr7 (405-544)||(28584327-28584466)
chr7 (403-564)||(19830804-19830965)
chr7 (401-521)||(23952727-23952848)
chr7 (407-564)||(4641828-4641983)
chr7 (18-175)||(4929259-4929419)
chr7 (407-580)||(35578902-35579074)
chr7 (492-580)||(35579256-35579344)
chr7 (538-573)||(32427397-32427432)
[»] chr5 (46 HSPs)
chr5 (402-580)||(2865124-2865302)
chr5 (404-580)||(5819298-5819474)
chr5 (401-580)||(18183338-18183517)
chr5 (402-580)||(8460928-8461106)
chr5 (404-580)||(8647438-8647614)
chr5 (404-580)||(19359136-19359312)
chr5 (402-580)||(24362205-24362383)
chr5 (403-580)||(29455111-29455288)
chr5 (400-576)||(14215616-14215792)
chr5 (401-580)||(15708968-15709146)
chr5 (401-580)||(164560-164739)
chr5 (401-580)||(15372242-15372421)
chr5 (403-580)||(16018588-16018763)
chr5 (402-564)||(19359520-19359683)
chr5 (402-564)||(5818927-5819090)
chr5 (402-564)||(18182968-18183131)
chr5 (401-564)||(8647822-8647986)
chr5 (403-566)||(25000471-25000635)
chr5 (402-569)||(14463901-14464067)
chr5 (406-580)||(24331929-24332107)
chr5 (403-564)||(8461315-8461477)
chr5 (410-564)||(24361843-24361997)
chr5 (426-580)||(25000112-25000266)
chr5 (404-563)||(164191-164350)
chr5 (406-564)||(2864756-2864915)
chr5 (410-564)||(24325218-24325372)
chr5 (406-564)||(14215243-14215402)
chr5 (401-564)||(24331556-24331722)
chr5 (403-564)||(29454739-29454901)
chr5 (404-544)||(7349422-7349562)
chr5 (402-566)||(16018969-16019134)
chr5 (405-524)||(4222147-4222266)
chr5 (404-564)||(15709353-15709513)
chr5 (404-545)||(4623148-4623287)
chr5 (406-517)||(15371873-15371983)
chr5 (404-542)||(4219663-4219800)
chr5 (404-530)||(7348559-7348685)
chr5 (410-542)||(6019177-6019309)
chr5 (417-543)||(4624631-4624757)
chr5 (405-543)||(6018315-6018452)
chr5 (455-544)||(13814133-13814226)
chr5 (483-564)||(14462683-14462769)
chr5 (492-564)||(10721873-10721945)
chr5 (521-580)||(24325580-24325639)
chr5 (534-564)||(14340793-14340823)
chr5 (534-580)||(16752711-16752757)
[»] chr1 (40 HSPs)
chr1 (403-580)||(50970647-50970824)
chr1 (402-580)||(18984117-18984295)
chr1 (403-573)||(5540194-5540364)
chr1 (403-580)||(29869619-29869796)
chr1 (403-573)||(15646571-15646741)
chr1 (406-580)||(33144288-33144462)
chr1 (407-580)||(5962947-5963120)
chr1 (407-580)||(15173099-15173272)
chr1 (404-573)||(29306953-29307122)
chr1 (404-580)||(8678911-8679086)
chr1 (401-580)||(9018970-9019149)
chr1 (404-580)||(21856412-21856588)
chr1 (404-580)||(17433216-17433392)
chr1 (406-580)||(39154021-39154195)
chr1 (402-578)||(26859431-26859606)
chr1 (404-573)||(29307317-29307487)
chr1 (401-573)||(9019338-9019511)
chr1 (406-566)||(17433597-17433758)
chr1 (402-562)||(50970276-50970437)
chr1 (404-564)||(29870003-29870164)
chr1 (403-544)||(52268289-52268430)
chr1 (405-564)||(5539817-5539977)
chr1 (405-521)||(8678542-8678658)
chr1 (401-564)||(21856039-21856203)
chr1 (405-563)||(4636356-4636515)
chr1 (402-564)||(15173478-15173640)
chr1 (403-530)||(18984538-18984665)
chr1 (403-564)||(39154404-39154566)
chr1 (412-564)||(33143925-33144078)
chr1 (402-564)||(15646190-15646353)
chr1 (404-521)||(26859059-26859176)
chr1 (405-564)||(5962579-5962739)
chr1 (464-578)||(4636033-4636146)
chr1 (406-520)||(52269177-52269291)
chr1 (401-490)||(2733416-2733505)
chr1 (395-504)||(47827033-47827141)
chr1 (404-564)||(17112282-17112442)
chr1 (406-479)||(47826966-47827039)
chr1 (404-484)||(50419726-50419806)
chr1 (540-574)||(17088516-17088550)
[»] scaffold0295 (2 HSPs)
scaffold0295 (401-580)||(4790-4969)
scaffold0295 (406-518)||(5222-5334)
[»] chr4 (62 HSPs)
chr4 (401-580)||(12234326-12234505)
chr4 (402-574)||(25447611-25447783)
chr4 (406-580)||(46193774-46193948)
chr4 (401-580)||(51020794-51020973)
chr4 (406-580)||(33109686-33109860)
chr4 (403-580)||(15523603-15523780)
chr4 (404-580)||(11153516-11153692)
chr4 (401-580)||(22434547-22434724)
chr4 (401-580)||(25937667-25937846)
chr4 (406-573)||(38962195-38962362)
chr4 (403-580)||(22170306-22170482)
chr4 (406-580)||(4219559-4219733)
chr4 (406-580)||(23494445-23494619)
chr4 (407-580)||(2118665-2118837)
chr4 (403-580)||(48526195-48526371)
chr4 (401-580)||(45082429-45082606)
chr4 (402-580)||(54995437-54995614)
chr4 (398-564)||(20470895-20471062)
chr4 (404-566)||(46193405-46193568)
chr4 (404-564)||(22434179-22434340)
chr4 (404-564)||(25447247-25447408)
chr4 (401-520)||(23494872-23494991)
chr4 (402-563)||(15523233-15523395)
chr4 (404-564)||(45082808-45082969)
chr4 (401-564)||(4219943-4220107)
chr4 (402-564)||(54995067-54995230)
chr4 (404-564)||(12234713-12234874)
chr4 (407-564)||(48526565-48526723)
chr4 (472-580)||(12503805-12503913)
chr4 (402-530)||(33109883-33110011)
chr4 (403-530)||(25938090-25938217)
chr4 (403-564)||(11153145-11153307)
chr4 (401-518)||(18763951-18764068)
chr4 (402-564)||(51021180-51021342)
chr4 (407-564)||(18751602-18751760)
chr4 (406-530)||(2118295-2118419)
chr4 (405-544)||(20958266-20958403)
chr4 (405-544)||(44892553-44892692)
chr4 (404-521)||(35363028-35363146)
chr4 (402-544)||(48293592-48293734)
chr4 (404-544)||(48294947-48295088)
chr4 (426-544)||(43243686-43243803)
chr4 (402-540)||(48708293-48708431)
chr4 (402-544)||(48713751-48713893)
chr4 (405-544)||(44890518-44890657)
chr4 (407-540)||(16690939-16691072)
chr4 (421-564)||(12503453-12503597)
chr4 (426-542)||(43281198-43281313)
chr4 (403-530)||(10258306-10258433)
chr4 (411-542)||(20957196-20957327)
chr4 (462-544)||(43242328-43242410)
chr4 (404-540)||(16691481-16691616)
chr4 (403-474)||(16318251-16318322)
chr4 (513-580)||(18751971-18752038)
chr4 (394-580)||(17503964-17504149)
chr4 (404-512)||(55189528-55189636)
chr4 (465-544)||(44220782-44220861)
chr4 (540-580)||(17504329-17504369)
chr4 (540-580)||(35193443-35193483)
chr4 (547-580)||(40160236-40160269)
chr4 (404-544)||(30597926-30598065)
chr4 (407-542)||(55191181-55191318)
[»] scaffold0273 (2 HSPs)
scaffold0273 (402-580)||(4576-4754)
scaffold0273 (443-564)||(4242-4364)
[»] chr6 (36 HSPs)
chr6 (402-580)||(20741098-20741276)
chr6 (404-580)||(10900299-10900475)
chr6 (404-580)||(11276951-11277127)
chr6 (402-580)||(18257135-18257313)
chr6 (403-580)||(15828010-15828187)
chr6 (401-580)||(28472634-28472812)
chr6 (401-580)||(29859823-29860001)
chr6 (402-578)||(12935528-12935704)
chr6 (401-580)||(11444984-11445163)
chr6 (405-580)||(31470685-31470860)
chr6 (404-578)||(1149802-1149977)
chr6 (401-564)||(2319669-2319832)
chr6 (407-580)||(2322588-2322760)
chr6 (407-573)||(10899942-10900109)
chr6 (405-580)||(18505288-18505463)
chr6 (401-564)||(12935154-12935318)
chr6 (401-564)||(11445371-11445535)
chr6 (401-564)||(22219737-22219901)
chr6 (402-564)||(23075512-23075675)
chr6 (403-580)||(23073998-23074164)
chr6 (404-567)||(4811372-4811535)
chr6 (407-564)||(18504922-18505080)
chr6 (403-564)||(31470314-31470476)
chr6 (404-564)||(18257521-18257682)
chr6 (403-564)||(20741485-20741650)
chr6 (403-573)||(11276589-11276760)
chr6 (406-544)||(29033436-29033575)
chr6 (407-540)||(3835135-3835268)
chr6 (405-530)||(15827639-15827766)
chr6 (406-544)||(29035042-29035180)
chr6 (401-544)||(18296142-18296284)
chr6 (402-492)||(1149463-1149553)
chr6 (404-530)||(4811675-4811801)
chr6 (497-579)||(35163557-35163639)
chr6 (404-460)||(22534214-22534270)
chr6 (540-580)||(32836367-32836407)
[»] chr8 (32 HSPs)
chr8 (396-580)||(12571855-12572040)
chr8 (401-580)||(19176659-19176838)
chr8 (395-580)||(44831614-44831799)
chr8 (402-577)||(41681132-41681306)
chr8 (408-580)||(13224645-13224816)
chr8 (397-580)||(31133213-31133396)
chr8 (403-580)||(9930026-9930203)
chr8 (401-578)||(11656452-11656630)
chr8 (407-580)||(33328161-33328334)
chr8 (404-580)||(9178005-9178180)
chr8 (403-564)||(13225023-13225185)
chr8 (401-564)||(19176287-19176451)
chr8 (403-564)||(44831246-44831408)
chr8 (404-521)||(41681562-41681679)
chr8 (401-564)||(33742919-33743082)
chr8 (451-578)||(33743290-33743417)
chr8 (407-580)||(4630161-4630328)
chr8 (407-564)||(9928912-9929070)
chr8 (403-564)||(11656841-11657003)
chr8 (401-530)||(34540967-34541096)
chr8 (405-563)||(31133605-31133764)
chr8 (407-564)||(12572235-12572393)
chr8 (406-564)||(33328524-33328683)
chr8 (402-512)||(11336959-11337069)
chr8 (402-558)||(4629795-4629952)
chr8 (403-544)||(8073957-8074097)
chr8 (401-542)||(10918123-10918264)
chr8 (486-544)||(43958267-43958325)
chr8 (496-564)||(9177724-9177793)
chr8 (402-437)||(9177665-9177700)
chr8 (546-579)||(18805304-18805337)
chr8 (401-449)||(43958206-43958254)
[»] chr3 (59 HSPs)
chr3 (404-580)||(39555946-39556122)
chr3 (402-580)||(31779021-31779199)
chr3 (407-580)||(41046703-41046876)
chr3 (402-580)||(5136978-5137156)
chr3 (400-578)||(20840556-20840734)
chr3 (401-580)||(24300925-24301104)
chr3 (403-580)||(37726928-37727105)
chr3 (403-580)||(23644461-23644638)
chr3 (401-559)||(48452986-48453144)
chr3 (401-580)||(26837725-26837903)
chr3 (401-580)||(30104479-30104657)
chr3 (404-578)||(32535330-32535508)
chr3 (406-580)||(25853596-25853770)
chr3 (403-580)||(27393946-27394123)
chr3 (404-573)||(43973441-43973610)
chr3 (408-580)||(22425182-22425354)
chr3 (401-564)||(43973824-43973988)
chr3 (401-564)||(17464488-17464652)
chr3 (401-580)||(26274936-26275114)
chr3 (403-580)||(17464860-17465038)
chr3 (404-564)||(37727314-37727475)
chr3 (403-564)||(20840945-20841107)
chr3 (403-564)||(27393660-27393822)
chr3 (401-566)||(29801798-29801964)
chr3 (403-564)||(39555577-39555739)
chr3 (402-564)||(4275748-4275911)
chr3 (403-564)||(31778652-31778814)
chr3 (407-544)||(25612382-25612519)
chr3 (404-564)||(23644849-23645010)
chr3 (404-564)||(25853234-25853395)
chr3 (401-564)||(5137365-5137529)
chr3 (403-564)||(30098147-30098309)
chr3 (404-525)||(29801356-29801477)
chr3 (401-564)||(22424811-22424975)
chr3 (407-530)||(32534962-32535085)
chr3 (404-544)||(50116814-50116954)
chr3 (402-564)||(26837358-26837521)
chr3 (407-564)||(24300560-24300717)
chr3 (404-543)||(23228414-23228552)
chr3 (407-564)||(26274570-26274728)
chr3 (407-564)||(41047083-41047239)
chr3 (405-545)||(32697105-32697244)
chr3 (401-544)||(51474738-51474882)
chr3 (405-518)||(51473429-51473542)
chr3 (402-544)||(37220555-37220697)
chr3 (402-542)||(45965936-45966076)
chr3 (406-542)||(25420548-25420684)
chr3 (429-532)||(18010162-18010265)
chr3 (405-544)||(25419145-25419284)
chr3 (402-480)||(37222040-37222118)
chr3 (403-544)||(23227261-23227396)
chr3 (401-581)||(49407793-49407972)
chr3 (509-580)||(55192222-55192293)
chr3 (520-580)||(29801532-29801592)
chr3 (401-580)||(27200062-27200240)
chr3 (497-580)||(37075781-37075864)
chr3 (407-531)||(32695706-32695830)
chr3 (401-457)||(52375824-52375880)
chr3 (401-457)||(55390090-55390146)
[»] chr2 (38 HSPs)
chr2 (402-578)||(11090519-11090695)
chr2 (401-580)||(239350-239528)
chr2 (403-580)||(40027139-40027316)
chr2 (404-580)||(43058333-43058509)
chr2 (401-580)||(18451200-18451379)
chr2 (401-580)||(40815714-40815893)
chr2 (402-580)||(22374318-22374496)
chr2 (402-580)||(1978106-1978284)
chr2 (403-580)||(26538096-26538273)
chr2 (404-578)||(28616613-28616788)
chr2 (407-577)||(14432145-14432315)
chr2 (401-573)||(26538454-26538627)
chr2 (401-580)||(3025463-3025641)
chr2 (407-573)||(8425736-8425902)
chr2 (282-403)||(16194936-16195057)
chr2 (403-578)||(7446341-7446519)
chr2 (403-544)||(20444748-20444889)
chr2 (401-564)||(7446730-7446894)
chr2 (401-544)||(20440437-20440579)
chr2 (403-564)||(18450829-18450991)
chr2 (397-564)||(40815338-40815506)
chr2 (402-564)||(22374709-22374872)
chr2 (407-564)||(40027524-40027682)
chr2 (405-544)||(35781068-35781207)
chr2 (404-544)||(35779708-35779848)
chr2 (401-564)||(43058717-43058880)
chr2 (402-564)||(11090904-11091067)
chr2 (403-564)||(28616998-28617160)
chr2 (405-564)||(239736-239896)
chr2 (402-530)||(1978528-1978656)
chr2 (402-521)||(28847123-28847242)
chr2 (406-544)||(8972239-8972377)
chr2 (407-563)||(8425358-8425514)
chr2 (404-563)||(3025848-3026006)
chr2 (406-545)||(15552458-15552596)
chr2 (406-544)||(15551501-15551639)
chr2 (401-564)||(14432525-14432689)
chr2 (401-580)||(28143400-28143578)
[»] scaffold0951 (2 HSPs)
scaffold0951 (402-578)||(1665-1841)
scaffold0951 (398-564)||(2051-2218)
[»] scaffold0019 (1 HSPs)
scaffold0019 (401-580)||(134042-134221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (403-580)||(64301-64478)
scaffold0007 (407-519)||(64735-64847)
scaffold0007 (406-580)||(205738-205911)
[»] scaffold1223 (2 HSPs)
scaffold1223 (406-580)||(755-928)
scaffold1223 (404-573)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (401-580)||(42528-42706)
scaffold0027 (407-573)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (407-580)||(10242-10414)
scaffold0432 (407-511)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (426-580)||(10643-10797)
scaffold0417 (404-530)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (403-571)||(18834-19001)
scaffold0176 (404-501)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (403-530)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (472-580)||(16564-16672)
scaffold0157 (421-564)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (405-544)||(568-707)
[»] scaffold0057 (2 HSPs)
scaffold0057 (407-544)||(61863-62000)
scaffold0057 (402-478)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (408-544)||(454-588)
[»] scaffold0076 (1 HSPs)
scaffold0076 (407-507)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (453-544)||(7693-7784)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 4903317 - 4903050
Alignment:
Q  18 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaatatagatccaaatgaaagaccag 117  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4903317 attgatcccattctcatgagattaatagcgccgcaatgtttggcagtgttcatggatatcatgaaaagatgcttgaatatagaaccaaatgaaagaccag 4903218  T
Q  118 ctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaaccat 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4903217 ctatgggtgaggttgaggtcgaacttgagcatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaaccat 4903118  T
Q  218 caattctacctagttaaccaccgtaagc-tccaatttgggatgagaataaattttatggattcctttt 284  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  4903117 caattctacctagttaaccactgtaagcttccaatttgggatgagaataaattttatggattcctttt 4903050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 4906694 - 4906435
Alignment:
Q  18 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaatatagatccaaatgaaagaccag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4906694 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaatatagaaccaaatgaaagaccag 4906595  T
Q  118 ctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaaccat 217  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||     
T  4906594 ctatgggtgaggttgaggtcgaacttgagcatgctctggaactgcaggaggaagcagattgtggaaaaagtaatgatgatttttacctttttccaagcac 4906495  T
Q  218 caattctacctagttaaccaccgtaagctccaatttgggatgagaataaattttatggat 277  Q
    || ||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  4906494 cagttctacctaattaaccacggtaagctcccatttgggctgagaataaattttatggat 4906435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 19830418 - 19830596
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 37786766 - 37786943
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 404 - 580
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 401 - 578
Target Start/End: Complemental strand, 2659388 - 2659211
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 38858642 - 38858819
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 402 - 578
Target Start/End: Complemental strand, 35289448 - 35289272
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 404 - 578
Target Start/End: Complemental strand, 32005159 - 32004985
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| || ||||||||| || |||||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 407 - 580
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 402 - 578
Target Start/End: Complemental strand, 34534338 - 34534162
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 19591073 - 19590909
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 410 - 573
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  410 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 509  Q
    |||||| |||||||| ||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  510 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 402 - 573
Target Start/End: Complemental strand, 4478247 - 4478076
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| || |  ||| ||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||||||||||| || ||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 38859189 - 38859025
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 4923924 - 4924099
Alignment:
Q  18 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaata---tagatccaaatgaaagac 114  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||    ||| |||||||||||||    
T  4923924 attgatcccattctcatgagattgatagcgccgcaatgtttggcagtgtttatgaatatcatgaaaagatgcttgaatagtggagaaccaaatgaaagac 4924023  T
Q  115 cagctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaa 190  Q
    || | ||||||||||||||||| ||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||    
T  4924024 caacaatgggtgaggttgaggttgaacttgagcatgctttggcactgcaggaggaagcagatcgtggggaaagtaa 4924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| |||| || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| ||||||||| || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 402 - 563
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    ||||||||||||| |||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 401 - 562
Target Start/End: Complemental strand, 37787315 - 37787153
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 562  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 5822946 - 5823114
Alignment:
Q  18 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaatatagatccaaatgaaagaccag 117  Q
    |||||||||||||||||||||||||||||||||   |||||| | |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||    
T  5822946 attgatcccattctcatgagattgattgcgccgtggtgtttgaaggtgttcatggatgtcatgaaaaaatgcttgaatatagacccaaacgaaagaccag 5823045  T
Q  118 ctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaa 186  Q
    | ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||  ||||||||    
T  5823046 caatgggcgaggttgaggttgaactcgagcatgctctagcactgcaggaggaaacagatgatgggaaaa 5823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 417 - 564
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  417 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtc 516  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  517 ctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||| || ||||| |  | ||| ||||||||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 35288903 - 35289019
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  504 tgcatttttcgtcctac 520  Q
    |||||||||||||||||    
T  35289003 tgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 401 - 544
Target Start/End: Original strand, 38160948 - 38161091
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||| |  ||||||||||||||||||||||||||  ||| ||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  38161048 tgttgcatttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 402 - 542
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| || | |||| |||||||||||||||| || ||||| ||| ||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaa 542  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 405 - 544
Target Start/End: Complemental strand, 28584466 - 28584327
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||||||||||||  ||| |||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    | |||||||||| ||||||||||||||| |||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||  |||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 401 - 521
Target Start/End: Original strand, 23952727 - 23952848
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcc-tattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 499  Q
    |||||||||||||||||||||||| |||||||||| || || |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  500 ttgttgcatttttcgtcctacc 521  Q
    | ||||||||||||||||||||    
T  23952827 tggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    || |||||||||||  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 4929259 - 4929419
Alignment:
Q  18 attgatcccattctcatgagattgattgcgccgcaatgtttggaagtgttcatggatatcatgaaaagatgcttgaatatagat---ccaaatgaaagac 114  Q
    |||||||| ||||||| |||||||||| | ||| ||||||||| ||||||| |  |||||||||||||||||||||||| |||    |||||||||||||    
T  4929259 attgatccaattctcacgagattgatttcaccggaatgtttggcagtgttcgtcaatatcatgaaaagatgcttgaatagagaagaaccaaatgaaagac 4929358  T
Q  115 cagctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcaga 175  Q
    |  | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4929359 cttcaatgggtgaggttgaggttgaacttgagcatgctctagcactgcaggaggaagcaga 4929419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 580
Target Start/End: Original strand, 35578902 - 35579074
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| | |  ||||| ||   |||| ||| ||||||||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    | ||||  ||||||  || |||||   ||||| ||||| |||||||||||| ||||||||||| ||||||||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 35579344 - 35579256
Alignment:
Q  492 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||| ||| ||||| |||| ||| |||| || |||||   ||| ||||||| || ||||| ||||||||||||||||||||||||||    
T  35579344 tatcatgttttttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 538 - 573
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  538 aaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 9e-87; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 2865302 - 2865124
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 18183517 - 18183338
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18183417 tgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 8460928 - 8461106
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 404 - 580
Target Start/End: Original strand, 8647438 - 8647614
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 404 - 580
Target Start/End: Original strand, 19359136 - 19359312
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 24362383 - 24362205
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 29455288 - 29455111
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 400 - 576
Target Start/End: Complemental strand, 14215792 - 14215616
Alignment:
Q  400 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 499  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  14215792 cttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 14215693  T
Q  500 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 576  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215692 ttgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 15708968 - 15709146
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15709068 tgttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 164739 - 164560
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||| | ||||| || || |||||||||| | |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  164639 tgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 15372421 - 15372242
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| || ||||  ||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||    
T  15372321 tgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 16018588 - 16018763
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||| ||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||| ||||||| ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  16018687 ttgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  502 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 8647986 - 8647822
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||| ||||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 403 - 566
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 566  Q
    ||||||||||||||| ||| || ||||| |  ||||||||||| |||||||||||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 569
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||  |  || |||||||||| ||||||||||| || ||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 569  Q
     ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14463967 attgcatttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 406 - 580
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  406 cttaattacactttt-ggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcattttt-g 502  Q
    ||||||||||||||| |||| || ||||||||| || ||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||||||| |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  503 ttgcattttt-cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
     ||||||||||||| |||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 410 - 564
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  410 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 509  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  510 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 426 - 580
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  426 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 525  Q
    ||||||||||||||| |||||||  ||||| |||||| ||||||||||| |||| |||| || ||||||||||||| |||||||||| ||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  526 attttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 404 - 563
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 406 - 564
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| || || ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  506 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 410 - 564
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  410 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatt 509  Q
    |||||||||||||||  | ||||||||||||  |||||||||| || ||||||| ||||||||||||||| |||| ||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  510 tttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 406 - 564
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||  | ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  506 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 24331556 - 24331722
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc--att 498  Q
    |||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  499 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
     |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 404 - 544
Target Start/End: Complemental strand, 7349562 - 7349422
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||||  || |||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||| ||||| |||||||||||||||| | |||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 566
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| || ||||||||| || |||||||| ||||||||| ||||||||| |||| |||| |||  ||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  502 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttagac 566  Q
    |||| ||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  505 gcatttttcgtcctaccccc 524  Q
    ||||||||||||||||||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| | ||||||||||||| ||| |||||| ||| |||||||| ||||||||||||||||||| || | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||||| || || |||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 545
Target Start/End: Original strand, 4623148 - 4623287
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||  |||||||||||||||||  ||| |||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgt 545  Q
     ||||||| |||||||  ||||||||||| ||||||||||||    
T  4623248 ggcattttccgtccta--ccccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 517
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||||||||| || |||| |||||| ||| |||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  506 catttttcgtcc 517  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 404 - 542
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||| || ||||||||||| ||||| || ||| ||||| |||| |||||||||||||||||   ||| || | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaa 542  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  4219763 tgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 404 - 530
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||| |||||||| || |||||| | ||| |||||||| ||||| ||||||||||||||||||||||||  || |||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  504 tgcatttttcgtcctaccccccatttt 530  Q
    |||| ||||||||||||||||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 410 - 542
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  410 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcat- 508  Q
    |||||| |||||||| || ||||||||| || ||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||||||||||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  509 ttttcgtcctaccccccattttattctccaaaaa 542  Q
    ||||||||||||| |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 417 - 543
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  417 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtc 516  Q
    |||| ||| |||||||||  |||| |||||||| ||||| || |  ||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  517 ctaccccccattttattctccaaaaac 543  Q
    |||||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 543
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||||| |||||||  ||||||||||  ||| |||||||||||||| || ||||||||||||||||||||   || |||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattatc-ttcaattatcatttttgtt 6018413  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaac 543  Q
    ||| |||| ||||||||| | |||||   ||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 455 - 544
Target Start/End: Complemental strand, 13814226 - 13814133
Alignment:
Q  455 cctgcccttttaaaacagaacaaaacggtcat-----tcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||| ||||||||||| |||||     ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 564
Target Start/End: Original strand, 14462683 - 14462769
Alignment:
Q  483 tcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctc----caaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |  |||    || |||||||||||||||||||||||||    
T  14462683 tcattcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 564
Target Start/End: Original strand, 10721873 - 10721945
Alignment:
Q  492 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  521 cccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||| ||    ||||||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 564
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  534 ctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 580
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  534 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 9e-84; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 50970824 - 50970647
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 18984117 - 18984295
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 403 - 573
Target Start/End: Complemental strand, 5540364 - 5540194
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 29869619 - 29869796
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 403 - 573
Target Start/End: Complemental strand, 15646741 - 15646571
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 406 - 580
Target Start/End: Complemental strand, 33144462 - 33144288
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 407 - 580
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 8679086 - 8678911
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8678986 tgcatttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 9018970 - 9019149
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||||||||    
T  9019070 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 404 - 580
Target Start/End: Original strand, 17433216 - 17433392
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| || |||||||||||| ||| |||||||  | |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| || ||||||||| || ||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | ||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 402 - 578
Target Start/End: Complemental strand, 26859606 - 26859431
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 404 - 573
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 401 - 573
Target Start/End: Complemental strand, 9019511 - 9019338
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| |||||||||| |||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||||||||||||||||| || ||||| |  | ||| ||||| |||||||| |||||||||||||| ||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 406 - 566
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  506 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 566  Q
    |||||||||||||||| || ||||| |  || || ||||| |||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 402 - 562
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 562  Q
    ||||||||||||||||||||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 403 - 544
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||| |||||||||||||||||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  505 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    | ||||||||||||||| || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  505 gcatttttcgtcctacc 521  Q
    |||||||||||||||||    
T  8678642 gcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 21856039 - 21856203
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||| ||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 405 - 563
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  505 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    ||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 403 - 530
Target Start/End: Complemental strand, 18984665 - 18984538
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  503 ttgcatttttcgtcctaccccccatttt 530  Q
    ||||||||||||||||||| || |||||    
T  18984565 ttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  412 tacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttt 511  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  512 tcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 404 - 521
Target Start/End: Original strand, 26859059 - 26859176
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  504 tgcatttttcgtcctacc 521  Q
    ||||||||||||||||||    
T  26859159 tgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  505 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||| ||||| || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 464 - 578
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  464 ttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 563  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  564 gacctaccccctatg 578  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 520
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |||||||||| | || ||| ||||  ||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  506 catttttcgtcctac 520  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 401 - 490
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 490  Q
    ||||||||||||| |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 47827141 - 47827033
Alignment:
Q  395 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 494  Q
    ||||| || |||||||| ||||||||| ||| | |||||||||||| |||||||| ||||| |||||||||||||||||||||||  ||| || ||||||    
T  47827141 ttaaattttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattat 47827043  T
Q  495 catttttgtt 504  Q
    ||||||||||    
T  47827042 catttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 404 - 564
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||  || |||||||  ||| ||| |||| ||||   |||||||||||| |||| ||||  ||| |||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| ||| |||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 479
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaa 479  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 484
Target Start/End: Complemental strand, 50419806 - 50419726
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 484  Q
    ||||||||| ||||||||||| |||  ||| | || | |||||||| |||||||||| ||||||||  |||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtc 50419726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 574
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  540 aaacgtagagaaatgacagttttagacctaccccc 574  Q
    ||||| |||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 4790 - 4969
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 406 - 518
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  506 catttttcgtcct 518  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 12234326 - 12234505
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 402 - 574
Target Start/End: Complemental strand, 25447783 - 25447611
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccc 574  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 406 - 580
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 51020794 - 51020973
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||||||||| || || |||||||||  |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51020894 tgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 33109686 - 33109860
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||| |||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 15523780 - 15523603
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 11153692 - 11153516
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  11153592 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 22434724 - 22434547
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttt 22434626  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22434625 tgttgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 25937667 - 25937846
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  25937767 tgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 406 - 573
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 22170482 - 22170306
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||| |||| | |||||| || ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||  |||||||||| |||| ||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  48526295 ttgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 45082429 - 45082606
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| |||||||| ||||||||| ||||||||||| ||| ||||||| |||||  ||||||||||||| |||||||||||||| |||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  45082528 tgttgcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 54995614 - 54995437
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||| |||||||||||||||| ||||||| | |||||||| ||||||||||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 398 - 564
Target Start/End: Complemental strand, 20471062 - 20470895
Alignment:
Q  398 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 497  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  20471062 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat 20470963  T
Q  498 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470962 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 404 - 566
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 566  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 404 - 564
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    || ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 404 - 564
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 401 - 520
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  501 tgttgcatttttcgtcctac 520  Q
    ||||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 402 - 563
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
     ||||||||||||||||||| || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 4220107 - 4219943
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| |||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 472 - 580
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  472 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 571  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  572 ccctatgct 580  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 402 - 530
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| || |||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  502 gttgcatttttcgtcctaccccccatttt 530  Q
    |||||||||||||||||||| || |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 403 - 530
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  503 ttgcatttttcgtcctaccccccatttt 530  Q
    |||||||||| |||||||| || |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 401 - 518
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  501 tgttgcatttttcgtcct 518  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 51021342 - 51021180
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| || |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||| ||| || ||||| |  ||||| ||||| ||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 2118295 - 2118419
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  506 catttttcgtcctaccccccatttt 530  Q
    |||||||||||||||| || |||||    
T  2118395 catttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 405 - 544
Target Start/End: Complemental strand, 20958403 - 20958266
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  20958303 gcattttt-gtccta-cccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 405 - 544
Target Start/End: Complemental strand, 44892692 - 44892553
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||| | |||||||| |||||||||| |||| |||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 404 - 521
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  503 ttgcatttttcgtcctacc 521  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 402 - 544
Target Start/End: Original strand, 48293592 - 48293734
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||| || ||||| |  ||||||||| |||||||  ||  ||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||| |||| ||| |||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 404 - 544
Target Start/End: Complemental strand, 48295088 - 48294947
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||||| ||||| ||||  ||||||||| |||||||  ||||||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  504 tgcattttt-cgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||| ||||||||||||||||||||  ||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 426 - 544
Target Start/End: Complemental strand, 43243803 - 43243686
Alignment:
Q  426 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 525  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| ||||||| ||||    
T  43243803 tcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac-cccc 43243705  T
Q  526 attttattctccaaaaacg 544  Q
    ||||||| |||||||||||    
T  43243704 attttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 402 - 540
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||||||   |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaa 540  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 402 - 544
Target Start/End: Complemental strand, 48713893 - 48713751
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| ||||||||||||||  |  ||||||||| ||||| ||| |||| ||||| ||| |||||||||||||||||||  ||| ||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 544
Target Start/End: Original strand, 44890518 - 44890657
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||   || || ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||| || ||||||||||||||| ||| |||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 407 - 540
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||| |||||||| | ||||||||  ||| |||||||| ||||||||||  ||||||||| |||||||   || |||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  507 atttttcgtcctaccccccattttattctccaaa 540  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 421 - 564
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  421 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctac 520  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  521 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 426 - 542
Target Start/End: Complemental strand, 43281313 - 43281198
Alignment:
Q  426 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 525  Q
    ||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||    
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacccccc 43281215  T
Q  526 attttattctccaaaaa 542  Q
    ||||||| ||| |||||    
T  43281214 attttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 403 - 530
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||  ||||  ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  503 ttgcatttttcgtcctaccccccatttt 530  Q
    ||||| |||| ||| ||||||| |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 542
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  411 ttacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcattt 510  Q
    ||||| |||||||| ||| |||||||| || |||||||| ||||| | | ||||||||||| |||||||  ||| ||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  511 ttcgtcctaccccccattttattctccaaaaa 542  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 462 - 544
Target Start/End: Original strand, 43242328 - 43242410
Alignment:
Q  462 ttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||  ||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 404 - 540
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||| ||   |||||||| |||| |||||||| ||||||||||  |||||| || |||||||  ||| || |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaa 540  Q
    ||||||||||||| |||| |||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaa 474  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  513 cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 580
Target Start/End: Original strand, 17503964 - 17504149
Alignment:
Q  394 attaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 493  Q
    |||||| | ||||||||||| ||| |||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||| ||| ||| |  || ||    
T  17503964 attaaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aacta 17504062  T
Q  494 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||| ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17504063 tcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||| | ||||| || |||||||||| ||||||||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  504 tgcattttt 512  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  465 taaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||  ||| |||| |||||||||||||| |||||||||| |||||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 580
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  540 aaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 580
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  540 aaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 580
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  547 gagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 544
Target Start/End: Complemental strand, 30598065 - 30597926
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctg-cccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||| ||||||||||||||| |||||||||| || | ||||| || |||| ||| | |||||||| | ||||||||  |||  | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||| |||| |||||| |||| ||||||   ||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacg 30597926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 542
Target Start/End: Complemental strand, 55191318 - 55191181
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta---tcatttttgt 503  Q
    ||||||| | ||||||| ||||||||||| | || ||| |||| ||||| |||| |||||||| |||| ||||  ||| || |||||   ||||||||||    
T  55191318 ttaattataattttggttttcgtgttttgacatactcatgaaaatggtcatgcc-ttttaaaatagaataaaattgtcttttaattactatcatttttgt 55191220  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaa 542  Q
    |||| ||||||| ||| ||  |||||||| ||| |||||    
T  55191219 tgcacttttcgttctaaccatcattttatcctctaaaaa 55191181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 155; Significance: 5e-82; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 4754 - 4576
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 443 - 564
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  443 cacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaa 541  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  542 acgtagagaaatgacagttttag 564  Q
    | | |||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 5e-82; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 20741098 - 20741276
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 10900475 - 10900299
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 11277127 - 11276951
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 18257135 - 18257313
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 15828187 - 15828010
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 28472634 - 28472812
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28472734 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 29859823 - 29860001
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29859923 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 402 - 578
Target Start/End: Complemental strand, 12935704 - 12935528
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||| ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 11444984 - 11445163
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  11445084 tgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 405 - 580
Target Start/End: Complemental strand, 31470860 - 31470685
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 404 - 578
Target Start/End: Complemental strand, 1149977 - 1149802
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  504 tgcatttttcgtcctaccccccattttattctcca-aaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 407 - 573
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 405 - 580
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||| ||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 11445535 - 11445371
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 22219901 - 22219737
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| ||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  502 gttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||| ||||| || | |||||  ||||||||| | |||||||||||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 23073998 - 23074164
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 404 - 567
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||||||   || |||||| ||| |||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacc 567  Q
    | ||||||||||| |||||||||||||||||| |||||||| ||| |||| |||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 18257682 - 18257521
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    | |||||||||||||||| |  |||||    ||||| | |||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat---tt 499  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  500 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    || ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 403 - 573
Target Start/End: Original strand, 11276589 - 11276760
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||| ||| |||  |||||||||| ||| ||| ||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    || |||||||||||||||| || ||||| |  ||||||||||| ||||||||||||||||||| ||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 406 - 544
Target Start/End: Original strand, 29033436 - 29033575
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |||| |||||||||  |||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  506 catttttcgtcctaccccccattttatt-ctccaaaaacg 544  Q
    ||  |||| |||||||||||||||| || |||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 407 - 540
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||||||||||||   |||||||| |||| |||||||| ||||||||||  |||||||||||||||||  ||| || ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  507 atttttcgtcctaccccccattttattctccaaa 540  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 530
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa--acggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| ||| |||||||||||| ||||||  |||||| ||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  503 ttgcatttttcgtcctaccccccatttt 530  Q
    ||||||||||||||||||| || |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 544
Target Start/End: Complemental strand, 29035180 - 29035042
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||| ||||  |||||||||||||||||||||||  ||| || | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||| |||| ||||||| | |||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 401 - 544
Target Start/End: Original strand, 18296142 - 18296284
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||| | |||| ||| |||||||||| | || |||| ||| || |  |||||||||||||||||||||||| ||| |||| ||||||||||    
T  18296142 ttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttt 18296241  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  18296242 tgttgcatttttcgtccta-cccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 402 - 492
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 492  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 404 - 530
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||| ||||||| || ||||||||||||||| ||| ||||||| || |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  504 tgcatttttcgtcctaccccccatttt 530  Q
    |||||||||| || |||| || |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 497 - 579
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  497 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgc 579  Q
    ||||| ||||| |||| |||||||| || |||||   ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 460  Q
    ||||||||||||||||||||| |||| ||||| || | |||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 580
Target Start/End: Complemental strand, 32836407 - 32836367
Alignment:
Q  540 aaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  32836407 aaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 396 - 580
Target Start/End: Original strand, 12571855 - 12572040
Alignment:
Q  396 taaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 495  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12571855 taaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatc 12571954  T
Q  496 atttttgttgcatttttcgtcct-accccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12571955 atttttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 19176838 - 19176659
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  19176738 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 395 - 580
Target Start/End: Complemental strand, 44831799 - 44831614
Alignment:
Q  395 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 494  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  44831799 ttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattat 44831700  T
Q  495 catttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44831699 catttttgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 402 - 577
Target Start/End: Original strand, 41681132 - 41681306
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctat 577  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  41681232 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 408 - 580
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  408 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 507  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  508 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 397 - 580
Target Start/End: Original strand, 31133213 - 31133396
Alignment:
Q  397 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 496  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||| |||||||| ||| ||||| |||||    
T  31133213 aaacataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatca 31133312  T
Q  497 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31133313 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 9930203 - 9930026
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 401 - 578
Target Start/End: Original strand, 11656452 - 11656630
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  501 tgttgcatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  11656552 tgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 407 - 580
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 9178180 - 9178005
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| || || |||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||    
T  9178080 tgcatttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 404 - 521
Target Start/End: Complemental strand, 41681679 - 41681562
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  504 tgcatttttcgtcctacc 521  Q
    ||||||||||||||||||    
T  41681579 tgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 33742919 - 33743082
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttt 33743017  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    || |||||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 451 - 578
Target Start/End: Complemental strand, 33743417 - 33743290
Alignment:
Q  451 tggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagaga 550  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  551 aatgacagttttagacctaccccctatg 578  Q
    ||| |||||||||||||||| |||||||    
T  33743317 aataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||||  ||||||||||||| | ||||||| |||||||||      ||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 401 - 530
Target Start/End: Complemental strand, 34541096 - 34540967
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  501 tgttgcatttttcgtcctaccccccatttt 530  Q
    ||||||||||||||||||||| || |||||    
T  34540996 tgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 405 - 563
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  505 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    |||||||||||| |||| || ||||| |  ||||| ||| | ||||||||||| ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 406 - 564
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||| |||||||||| ||||||||| ||||| |||||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  506 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||| ||| |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 402 - 512
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  502 gttgcattttt 512  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 402 - 558
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||| |||||||  |  |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacag 558  Q
     |||||||||||||| |||| || ||||| |  ||||| ||||| | |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 403 - 544
Target Start/End: Complemental strand, 8074097 - 8073957
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| || || || ||||||||||||||||||||   || ||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||| ||||  | |||||||||||  |||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 401 - 542
Target Start/End: Original strand, 10918123 - 10918264
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| ||||||||| |||| ||| ||||||||||  ||| |||||||| ||||| ||||   |||||||||| |||||  ||| ||||| |||||||||    
T  10918123 ttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttt 10918222  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaa 542  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  10918223 tgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 43958267 - 43958325
Alignment:
Q  486 ttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  43958267 ttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  496 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 437
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggc 437  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 579
Target Start/End: Original strand, 18805304 - 18805337
Alignment:
Q  546 agagaaatgacagttttagacctaccccctatgc 579  Q
    ||||||||||||||||||||| ||||||||||||    
T  18805304 agagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 43958206 - 43958254
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 449  Q
    |||| |||||||| |||||||||||||||||||||  ||| ||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 8e-81; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 404 - 580
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 31779199 - 31779021
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 407 - 580
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 5136978 - 5137156
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 400 - 578
Target Start/End: Original strand, 20840556 - 20840734
Alignment:
Q  400 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattt 499  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  20840556 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattt 20840655  T
Q  500 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  20840656 ttgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 24301104 - 24300925
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||| ||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24301004 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 37726928 - 37727105
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||| ||  | ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 23644461 - 23644638
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 401 - 559
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 559  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 26837903 - 26837725
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttt 26837805  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  26837804 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 30104479 - 30104657
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| || | ||||||| |||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||    
T  30104579 tgttgcatttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 404 - 578
Target Start/End: Complemental strand, 32535508 - 32535330
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc-----att 498  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  499 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 406 - 580
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||||||||| || ||||||||||  ||| |||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 27394123 - 27393946
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||| | |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| || |  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 408 - 580
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  408 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 507  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  508 tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 43973988 - 43973824
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 26275114 - 26274936
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| ||||||| | |||||| | | |||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  26275114 ttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttt 26275015  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  26275014 tgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 17465038 - 17464860
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||||| |||||||| |||||||||||||||  || ||||||||||   ||||||||||| |||||||||||||| |||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  503 ttgcat-ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 401 - 566
Target Start/End: Complemental strand, 29801964 - 29801798
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29801865  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 566  Q
    ||||||||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||||    
T  29801864 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||| ||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| || |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 25612519 - 25612382
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| ||||||| || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 404 - 564
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||| ||||| || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||| |||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||| | || |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||| || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 404 - 525
Target Start/End: Original strand, 29801356 - 29801477
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  504 tgcatttttcgtcctacccccc 525  Q
    ||||||||||||| ||||||||    
T  29801456 tgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 22424811 - 22424975
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||  ||||||||  ||||| | ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 407 - 530
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| |||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  507 atttttcgtcctaccccccatttt 530  Q
    ||||||||||||||| || |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 404 - 544
Target Start/End: Complemental strand, 50116954 - 50116814
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||| |||||||||||||||||||||| | |||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 402 - 564
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| ||||||||| |||||||| | || |||||||||| |||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  24300560 ttaattacatttttggtct-cgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    | ||||||||| ||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 404 - 543
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| || || |||||||||||||| ||||||||  ||| |||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaac 543  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 407 - 564
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||| ||||| || | || |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| |||| || ||||| |  ||||| ||||| ||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||||| ||| ||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgttgc 41047142  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 545
Target Start/End: Complemental strand, 32697244 - 32697105
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||| | |||  ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacgt 545  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  32697144 gcatttttcgtcctac-ccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 401 - 544
Target Start/End: Complemental strand, 51474882 - 51474738
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||   ||||||||||| || |||||||| ||||| ||||||||||||||| |||||||  ||| || | ||||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttt 51474783  T
Q  501 tgttgcatttttcgtcctacccccca-ttttattctccaaaaacg 544  Q
    |||||||||||||||||||||||| | |||||| |||||||||||    
T  51474782 tgttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 405 - 518
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||| |||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  505 gcatttttcgtcct 518  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 402 - 544
Target Start/End: Original strand, 37220555 - 37220697
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||| |||||||||| |||| | |  | || ||| |||||||||||||| ||||  ||| |||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||| |||||||||||||| ||||||||| |||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 542
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||  |  |||||| ||||||||||| |||||||  ||| ||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaa 542  Q
    |||||||||||||| ||| |||||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 406 - 542
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    |||||||||||||||| || |||| ||||| |||| |||||||| || ||  |||||||||||| |||| ||||  ||| ||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  506 catttttcgtcctaccccccattttattctccaaaaa 542  Q
    ||||||||||| ||||||||||||||| || ||||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 429 - 532
Target Start/End: Complemental strand, 18010265 - 18010162
Alignment:
Q  429 tgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatt 528  Q
    |||||| | ||| |||||||| |||| | ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||| |||||    
T  18010265 tgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccatt 18010166  T
Q  529 ttat 532  Q
    ||||    
T  18010165 ttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 405 - 544
Target Start/End: Original strand, 25419145 - 25419284
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggt-cattcaattatca-tttttg 502  Q
    |||| |||| |||||||||||||||||||| || || |||||||| | || ||||||||||||||||||||||||| || | ||||||||||| |||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||| |||| |||||  |||||||||||  |||||||||||    
T  25419245 ttgcagttttagtccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 480
Target Start/End: Complemental strand, 37222118 - 37222040
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaac 480  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||| |||||||||| |||||||||||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 403 - 544
Target Start/End: Original strand, 23227261 - 23227396
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||| ||||| |||||||||||  |||||||||| || |||||||| |||||||       | ||||||||||||   ||| | ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 401 - 581
Target Start/End: Original strand, 49407793 - 49407972
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| |||  ||||| ||   |||||||| ||||| ||||  ||| ||| |||||||||| |||  | || | |   |||    
T  49407793 ttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttt 49407892  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgcta 581  Q
    |||  || |||| ||| |||| || |||||   ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  49407893 tgta-cagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 580
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  509 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 580
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  520 ccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 27200240 - 27200062
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| | |  ||||| ||   |||||||| |||| |||||  ||| |||  |||||| || ||| |  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    | ||||| |||| ||| |||| || |||||   ||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 580
Target Start/End: Original strand, 37075781 - 37075864
Alignment:
Q  497 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||| ||||| |||| |||||||| |  |||||   ||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 531
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||| |||||||| || | |||||||||| | |||||| || |  || | ||||||||||||||||||  ||| | | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  507 atttttcgtcctaccccccatttta 531  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 457  Q
    |||||||||||||||||||||||| |||  ||||| || | |||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 55390146 - 55390090
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 457  Q
    |||||||||||||||||||||||| |||  ||||  || |||||||||| |||||||    
T  55390146 ttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 8e-81; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 402 - 578
Target Start/End: Original strand, 11090519 - 11090695
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 239350 - 239528
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 40027139 - 40027316
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 404 - 580
Target Start/End: Original strand, 43058333 - 43058509
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||||||||| || ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 18451379 - 18451200
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18451279 tgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 40815893 - 40815714
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  40815793 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 22374318 - 22374496
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| || |||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 402 - 580
Target Start/End: Original strand, 1978106 - 1978284
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 26538096 - 26538273
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 404 - 578
Target Start/End: Original strand, 28616613 - 28616788
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  504 tgcatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    |||| ||||||||||||||||||||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 407 - 577
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctat 577  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 401 - 573
Target Start/End: Complemental strand, 26538627 - 26538454
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||||||||||||||||||||||| |  | ||| ||||| ||||||||||||||||||||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 401 - 580
Target Start/End: Original strand, 3025463 - 3025641
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||| || |||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  3025563 tgttgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 407 - 573
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||  | ||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 16194936 - 16195057
Alignment:
Q  282 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagaccaggtatttcatgta 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16194936 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagactaggtatttcatgta 16195035  T
Q  382 agtgtaacatgtattaaactta 403  Q
    ||||||||||||||||||||||    
T  16195036 agtgtaacatgtattaaactta 16195057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 403 - 578
Target Start/End: Original strand, 7446341 - 7446519
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    ||||||||||||||||||| || ||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacag----ttttagacctaccccctatg 578  Q
    |||||||||||||| || |||||||||||||||||||||||| |||||||||||||    |||||||| |||||||||||    
T  7446441 ttgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 403 - 544
Target Start/End: Original strand, 20444748 - 20444889
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 7446894 - 7446730
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||| ||||| || |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 401 - 544
Target Start/End: Complemental strand, 20440579 - 20440437
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||||    
T  20440479 tgttgcagttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 397 - 564
Target Start/End: Original strand, 40815338 - 40815506
Alignment:
Q  397 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 496  Q
    |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||  |||||||||||    
T  40815338 aaactttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca 40815437  T
Q  497 tttttgttgcatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815438 tttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||| || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 405 - 544
Target Start/End: Complemental strand, 35781207 - 35781068
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||  || |||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 404 - 544
Target Start/End: Original strand, 35779708 - 35779848
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  504 tgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 43058880 - 43058717
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttt 43058782  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058781 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 402 - 564
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  502 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||| ||||||||||||| | || ||||| |  ||||| ||||| ||| |||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  503 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||| |||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 405 - 564
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  505 gcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    || ||||||||| |||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 402 - 530
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  502 gttgcatttttcgtcctaccccccatttt 530  Q
    ||||||||||| |||||||| || |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 402 - 521
Target Start/End: Complemental strand, 28847242 - 28847123
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    |||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  502 gttgcatttttcgtcctacc 521  Q
    ||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 406 - 544
Target Start/End: Original strand, 8972239 - 8972377
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |||||||||||| |  |||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||| |||||||| ||||||| |||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 407 - 563
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| | ||||||||||||| |||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    ||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 404 - 563
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    |||||||||||| |||||||| |||||||||||| || |||||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 563  Q
    |||||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 406 - 545
Target Start/End: Complemental strand, 15552596 - 15552458
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |  |||||||||||| |||||||| || ||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgt 545  Q
     |||||||||||||||| |||||||   ||||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 406 - 544
Target Start/End: Original strand, 15551501 - 15551639
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||| |||||||||||  || |||||||| ||||| |||| |||||||||| |||||||  ||| |||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||| |||| ||||||||| |||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 401 - 564
Target Start/End: Complemental strand, 14432689 - 14432525
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||| |||||||||| |||| ||||||||||||| |||| |||  ||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  501 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    ||||||||||||| ||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 28143578 - 28143400
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||| ||||||||||| |||  ||||| ||   |||||||| ||||||||||  ||| |||  ||||||||  |||  | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    | ||||| |||| |||||||  || |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 402 - 578
Target Start/End: Original strand, 1665 - 1841
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  502 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 578  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 398 - 564
Target Start/End: Complemental strand, 2218 - 2051
Alignment:
Q  398 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 497  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2218 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 2119  T
Q  498 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    |||||||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2118 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 134221 - 134042
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||| || |||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  134121 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 142; Significance: 3e-74; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 403 - 580
Target Start/End: Original strand, 64301 - 64478
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||||||||||||||||||| |||||||||| | || ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  507 atttttcgtccta 519  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 580
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||| ||| ||   ||||| || | |||||||| ||||||||||  ||| |||  ||||||||| |||  | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    || |||| |||||||  || |||||   ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 755 - 928
Alignment:
Q  406 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 505  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  506 catttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 404 - 573
Target Start/End: Complemental strand, 1286 - 1116
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  504 tgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    ||||| |||||||||||| || ||||| |  | ||| ||||| ||| ||||| |||||||||||| |||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 42706 - 42528
Alignment:
Q  401 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 500  Q
    ||||||||||||| |||||||| | ||||||||||| ||| ||| ||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 42607  T
Q  501 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42606 tgtttcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 407 - 573
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||| ||  ||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  507 atttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 573  Q
    |||||| ||| |||| || ||||| |  || || ||||| ||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 407 - 580
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| || ||||||||||| | ||||||||| |||| ||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  507 atttt 511  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 426 - 580
Target Start/End: Original strand, 10643 - 10797
Alignment:
Q  426 tcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctacccccc 525  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  526 attttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 580  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  10743 attttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 404 - 530
Target Start/End: Complemental strand, 11168 - 11042
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 503  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  504 tgcatttttcgtcctaccccccatttt 530  Q
    |||||||||||||||||| || |||||    
T  11068 tgcatttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 403 - 571
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||||| ||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  503 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 571  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  18934 ttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 404 - 501
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  404 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 501  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 403 - 530
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  403 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 502  Q
    |||| ||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  503 ttgcatttttcgtcctaccccccatttt 530  Q
    ||||| |||||||||| |||||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 472 - 580
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  472 gaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 571  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  572 ccctatgct 580  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 421 - 564
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  421 ggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctac 520  Q
    |||| |||||||||| | || ||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  521 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 564  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 405 - 544
Target Start/End: Original strand, 568 - 707
Alignment:
Q  405 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 504  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  505 gcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    | ||||||||||  ||| ||||||| || |||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacg 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 62000 - 61863
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||   |||||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  507 atttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||||||||||||||| | |||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 478
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  402 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaa 478  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 408 - 544
Target Start/End: Original strand, 454 - 588
Alignment:
Q  408 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 507  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||| ||  ||||||||||| |||| ||  ||| ||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  508 tttttcgtcctaccccccattttattctccaaaaacg 544  Q
    |||||||||||| | |||||||||| ||| |||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacg 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 407 - 507
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  407 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 506  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  507 a 507  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 453 - 544
Target Start/End: Complemental strand, 7784 - 7693
Alignment:
Q  453 gtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacg 544  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University