View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19257_high_4 (Length: 360)
Name: NF19257_high_4
Description: NF19257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19257_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 12 - 353
Target Start/End: Complemental strand, 44542103 - 44541762
Alignment:
| Q |
12 |
atgatgatgtcacatacactgacgaagatacctcaaaagcaactgagactacctcccttgatcacaaggaagggctgatagaacaagaattcaagaaata |
111 |
Q |
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| T |
44542103 |
atgatgatgtcacatacaccgacgaagatacctcaaaagcaactgagactacctcccttgatgacaaggaagggctgatagaacaagaattcaagaaata |
44542004 |
T |
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| Q |
112 |
ttactgtgaaagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaa |
211 |
Q |
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| T |
44542003 |
ttactgtgaaagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaa |
44541904 |
T |
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| Q |
212 |
acagtgaatttcactatgctgcaaaaggaacaaccatcaatattgacatcatgggttatgcccatgctgatgttaggattgctaatgctcctagttctgc |
311 |
Q |
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| T |
44541903 |
acagcgaatttcactatgctgcaaaaggaacaaccatcaatattgacatcctgggttatgcccatgctgatgttaggattgctaatgctcctagttctgc |
44541804 |
T |
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| Q |
312 |
tgacccgtggcttacaggaatctcttaatgtttttgatgatg |
353 |
Q |
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| T |
44541803 |
tgacccgtggcttacaggaatctcttaatgttcttgatgatg |
44541762 |
T |
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