View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19257_high_9 (Length: 240)
Name: NF19257_high_9
Description: NF19257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19257_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44542714 - 44542931
Alignment:
| Q |
1 |
gtgtgatatgtgtatattaattaattgttatatcatacgatgtggcatcctcctcaagttgggatgttgaattttgaagagagtctttatcgtgagccaa |
100 |
Q |
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| T |
44542714 |
gtgtgatatgtgtatattaattaattgttatatcatacgatgtggcatcctcctcaagttgggatgttgaattttgaagagagtgtttatcgtcagccaa |
44542813 |
T |
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| Q |
101 |
taataattgttggtggtgagactgaggatggatgatgggttttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatggccaat |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44542814 |
taataattgttggtgg------tgaggatggatgatgggttttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatagccaat |
44542907 |
T |
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| Q |
201 |
gctccaccgaacacaagaagtccc |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
44542908 |
gctccaccgaacacaagaagtccc |
44542931 |
T |
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