View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19257_low_3 (Length: 444)

Name: NF19257_low_3
Description: NF19257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19257_low_3
NF19257_low_3
[»] chr7 (9 HSPs)
chr7 (20-384)||(28287646-28288006)
chr7 (20-118)||(28321269-28321367)
chr7 (20-105)||(28310695-28310780)
chr7 (20-94)||(28297207-28297281)
chr7 (274-330)||(43542440-43542496)
chr7 (20-114)||(28331748-28331842)
chr7 (274-330)||(33117877-33117933)
chr7 (274-330)||(27986229-27986284)
chr7 (269-321)||(32595209-32595261)
[»] chr2 (3 HSPs)
chr2 (268-323)||(18497212-18497267)
chr2 (277-330)||(28694387-28694440)
chr2 (274-323)||(38766288-38766337)
[»] chr8 (6 HSPs)
chr8 (274-324)||(373750-373800)
chr8 (277-330)||(5374616-5374669)
chr8 (270-330)||(37288371-37288431)
chr8 (277-330)||(40439758-40439811)
chr8 (277-329)||(23052267-23052319)
chr8 (269-323)||(34944143-34944197)
[»] chr1 (5 HSPs)
chr1 (277-330)||(12967283-12967336)
chr1 (269-322)||(33816370-33816423)
chr1 (269-322)||(33875840-33875893)
chr1 (269-324)||(2603108-2603163)
chr1 (269-321)||(21938051-21938103)
[»] chr3 (7 HSPs)
chr3 (269-329)||(118775-118835)
chr3 (277-327)||(52551092-52551142)
chr3 (274-323)||(1214775-1214825)
chr3 (269-330)||(11225837-11225898)
chr3 (269-330)||(11236093-11236154)
chr3 (283-324)||(25630149-25630190)
chr3 (278-330)||(46879408-46879460)
[»] chr4 (4 HSPs)
chr4 (269-324)||(31063634-31063689)
chr4 (277-329)||(27918229-27918281)
chr4 (275-330)||(19529675-19529730)
chr4 (277-329)||(42170691-42170743)
[»] chr5 (1 HSPs)
chr5 (277-330)||(15711034-15711087)
[»] chr6 (1 HSPs)
chr6 (285-330)||(32109584-32109629)


Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 20 - 384
Target Start/End: Complemental strand, 28288006 - 28287646
Alignment:
Q  20 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaaggaaatt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288006 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaaggaaatt 28287907  T
Q  120 agtatcaaaagcttttggtagtccatggcttctggctcttccacaccttaattttcagtgtgatataaagatatatatattaaagtggaccttataggta 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  28287906 agtatcaaaagcttttggtagtccatggcttctggctcttccacaccttaattttctgtgtgatataaagatatatatagtaaagtggaccttataggta 28287807  T
Q  220 atagatttactctatgtgacactccttccatccaaaattatatgttttaatgacttattttacaaaaatatcttttattaatggcatggaaaacataaat 319  Q
    ||||||||||| || |||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28287806 atagatttactgtacgtgacactccttccatccaaaat--tacgttttaatgagttattttacaaaaatatcttttattaatggcatggaaaatataaat 28287709  T
Q  320 taaaataattgnnnnnnnnntaaagtaataactagtaaattgcatgatggaaaaataatcattaa 384  Q
    |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  28287708 taaaataattg--aaaaaaataaagtaataactagtaaattgcatgatggaaaaataatcattaa 28287646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 28321269 - 28321367
Alignment:
Q  20 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaaggaaat 118  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||| ||| |||||||||||||||||||    
T  28321269 gggaagtggctttggccctggtggaagtttagtagaattttgggtttggtttgattttctaagaatgaagatgagaatggttgcacttacaaaggaaat 28321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 28310695 - 28310780
Alignment:
Q  20 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcac 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||| ||||    
T  28310695 gggaagtggttttggccctggtggaagttttgtagaattttgagtttggtttaattttttaaaaatgaagatgagaatgctcgcac 28310780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 28297207 - 28297281
Alignment:
Q  20 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgag 94  Q
    ||||||||| | |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||    
T  28297207 gggaagtgggtatggccctggtggaagtttagtagaattttgggtttggattaattttctaagaatgaagatgag 28297281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 43542496 - 43542440
Alignment:
Q  274 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  43542496 ttattttacaaaaatatcatttattaatagcatggaaaacgtaaattaaaagaattg 43542440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 28331748 - 28331842
Alignment:
Q  20 gggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaagg 114  Q
    ||||| ||| ||||||||||||||||| || || |||||||| ||||| || | |||||||| ||| | |||||| |||||||||||| ||||||    
T  28331748 gggaaatgggtttggccctggtggaagcttggtggaattttgggtttgtttaacttttctaataataaagatgagaatgcttgcacttgcaaagg 28331842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 33117877 - 33117933
Alignment:
Q  274 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||||||||||||||||||||||||||||  ||||||||||| || ||||| |||||    
T  33117877 ttattttacaaaaatatcttttattaatgaaatggaaaacatgaactaaaagaattg 33117933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 27986284 - 27986229
Alignment:
Q  274 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||||||| ||||| ||||||||||||||| ||| |||||||||||||||| |||||    
T  27986284 ttattttaaaaaaa-atcttttattaatggaatgaaaaacataaattaaaagaattg 27986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 32595209 - 32595261
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaatta 321  Q
    |||| |||||||| ||||||||| ||||||||||| ||  |||||||||||||    
T  32595209 atgagttattttataaaaatatcctttattaatggtataaaaaacataaatta 32595261  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 18497267 - 18497212
Alignment:
Q  268 aatgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 323  Q
    ||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  18497267 aatgagttattttacaaaaatatattttattaatggtttggaaaacataaattaaa 18497212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 28694387 - 28694440
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  28694387 ttttacaaaaatattctttattaatggtatgaaaaacataaattaaaataattg 28694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 38766337 - 38766288
Alignment:
Q  274 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 323  Q
    ||||||||||||| |||| || ||||||||||||| ||| ||||||||||    
T  38766337 ttattttacaaaactatccttcattaatggcatgggaaaaataaattaaa 38766288  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 373750 - 373800
Alignment:
Q  274 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 324  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  373750 ttattttacaaaaatatcttttattaattgtatggaaaatataaattaaaa 373800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 5374669 - 5374616
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||||||||||| ||||||||||  |||||||||||||| |||||||||||    
T  5374669 ttttacaaaaatatcatttattaatgatatggaaaacataaaataaaataattg 5374616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 37288371 - 37288431
Alignment:
Q  270 tgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||||| |||||||||||||| |||||||||| | ||| |||| |||||||||||||||||    
T  37288371 tgacttgttttacaaaaatattttttattaattgtatgaaaaatataaattaaaataattg 37288431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 40439758 - 40439811
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||| |||||    
T  40439758 ttttacaaaaatatccttcactaatggtatggaaaacataaattaaaagaattg 40439811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 23052319 - 23052267
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 329  Q
    ||||||||| ||||| || |||||||| ||||||||||| |||||||||||||    
T  23052319 ttttacaaagatatccttcattaatggtatggaaaacattaattaaaataatt 23052267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 34944197 - 34944143
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 323  Q
    |||| ||||||||| |||||||| || |||||||  |||||||||||||||||||    
T  34944197 atgagttattttactaaaatatccttcattaatgatatggaaaacataaattaaa 34944143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 12967336 - 12967283
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||    
T  12967336 ttttacaaaaatatcctttattaatggtatggaaaacataaataaaaagaattg 12967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 33816423 - 33816370
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaa 322  Q
    |||| ||||| ||| |||||||| || |||||||||||||||||||||||||||    
T  33816423 atgagttattatacgaaaatatcattcattaatggcatggaaaacataaattaa 33816370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 33875893 - 33875840
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaa 322  Q
    |||| ||||| ||| |||||||| || |||||||||||||||||||||||||||    
T  33875893 atgagttattatacgaaaatatcattcattaatggcatggaaaacataaattaa 33875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 2603163 - 2603108
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 324  Q
    |||| |||||||||||||||||| || ||||| |  ||||||||||||||||||||    
T  2603163 atgagttattttacaaaaatatcattcattaacgatatggaaaacataaattaaaa 2603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 21938103 - 21938051
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaatta 321  Q
    |||| ||||||||||||||||||||| |||| ||| |||  ||||||||||||    
T  21938103 atgaattattttacaaaaatatctttcattagtggtatgataaacataaatta 21938051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 118835 - 118775
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 329  Q
    |||| |||||||||||||||||| || |||||||| |||| ||||||||||||||| ||||    
T  118835 atgagttattttacaaaaatatcattaattaatggtatggtaaacataaattaaaagaatt 118775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 52551092 - 52551142
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataa 327  Q
    |||| |||||||||| ||||||||||| ||| |||||||||||||||||||    
T  52551092 ttttgcaaaaatatcatttattaatggtatgaaaaacataaattaaaataa 52551142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 1214775 - 1214825
Alignment:
Q  274 ttattttacaaaaa-tatcttttattaatggcatggaaaacataaattaaa 323  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||||||||    
T  1214775 ttattttacaaaaaatatcctttattattggtatggaaaacataaattaaa 1214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 11225898 - 11225837
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||| ||||||||||||||||||||| ||||||   |||||||| ||| ||||||| |||||    
T  11225898 atgaattattttacaaaaatatctttcattaatcatatggaaaaaatacattaaaagaattg 11225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 11236154 - 11236093
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||| ||||||||| |||| |||||||||||||   |||||||| ||||||||||| |||||    
T  11236154 atgagttattttactaaaacatcttttattaattatatggaaaatataaattaaaagaattg 11236093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 25630190 - 25630149
Alignment:
Q  283 aaaaatatcttttattaatggcatggaaaacataaattaaaa 324  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  25630190 aaaaatatcctttattaatggtatcgaaaacataaattaaaa 25630149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 46879408 - 46879460
Alignment:
Q  278 tttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    |||| ||||||||| |||||||||   |||||||||||||||||||| |||||    
T  46879408 tttataaaaatatcatttattaataatatggaaaacataaattaaaagaattg 46879460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 31063689 - 31063634
Alignment:
Q  269 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 324  Q
    |||| |||||||||||||||||| || | |||||| ||||||||||||||||||||    
T  31063689 atgagttattttacaaaaatatccttcactaatggtatggaaaacataaattaaaa 31063634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 27918229 - 27918281
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 329  Q
    ||||||| ||||||| ||||||||| | |||||||||||||||||||| ||||    
T  27918229 ttttacataaatatcatttattaatagtatggaaaacataaattaaaagaatt 27918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 19529675 - 19529730
Alignment:
Q  275 tattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||||||||||||  ||||||||||| ||||||||| ||||| |||| |||||    
T  19529675 tattttacaaaaatattctttattaatggtatggaaaacctaaataaaaagaattg 19529730  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 42170743 - 42170691
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 329  Q
    ||||||||||||||| ||  |||||||  ||||||||||||||||||| ||||    
T  42170743 ttttacaaaaatatcattcgttaatggtgtggaaaacataaattaaaagaatt 42170691  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 15711034 - 15711087
Alignment:
Q  277 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||| ||||||||| || |||||||| |||||||||||||||||||| |||||    
T  15711034 ttttataaaaatatcattcattaatggtatggaaaacataaattaaaagaattg 15711087  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 32109584 - 32109629
Alignment:
Q  285 aaatatcttttattaatggcatggaaaacataaattaaaataattg 330  Q
    ||||||| || |||||||| |||||||||||||||||||| |||||    
T  32109584 aaatatcattcattaatggtatggaaaacataaattaaaagaattg 32109629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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