View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19258_high_1 (Length: 730)

Name: NF19258_high_1
Description: NF19258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19258_high_1
NF19258_high_1
[»] chr1 (15 HSPs)
chr1 (18-730)||(45533674-45534389)
chr1 (551-681)||(35213217-35213343)
chr1 (38-114)||(35216859-35216935)
chr1 (405-444)||(35202747-35202786)
chr1 (26-85)||(35272837-35272896)
chr1 (169-212)||(39130769-39130812)
chr1 (488-586)||(35216625-35216723)
chr1 (168-212)||(30749853-30749897)
chr1 (168-212)||(30771304-30771348)
chr1 (35-114)||(35213469-35213549)
chr1 (32-63)||(35203119-35203150)
chr1 (169-212)||(39953148-39953191)
chr1 (32-111)||(43638196-43638271)
chr1 (175-212)||(7353495-7353532)
chr1 (35-84)||(35222706-35222755)
[»] chr7 (6 HSPs)
chr7 (168-212)||(18213035-18213079)
chr7 (173-212)||(7328693-7328732)
chr7 (169-211)||(2948697-2948739)
chr7 (173-206)||(8160434-8160467)
chr7 (175-212)||(15902842-15902879)
chr7 (173-210)||(27732243-27732280)
[»] chr2 (3 HSPs)
chr2 (168-212)||(34784984-34785028)
chr2 (168-273)||(20242668-20242773)
chr2 (168-212)||(20922930-20922974)
[»] chr5 (2 HSPs)
chr5 (173-212)||(36838561-36838600)
chr5 (168-210)||(39758285-39758327)
[»] chr6 (3 HSPs)
chr6 (173-212)||(7086813-7086852)
chr6 (173-212)||(9195756-9195795)
chr6 (167-212)||(17327657-17327702)
[»] chr8 (2 HSPs)
chr8 (172-218)||(26902171-26902217)
chr8 (168-213)||(18964190-18964235)
[»] chr3 (1 HSPs)
chr3 (167-273)||(35222950-35223056)


Alignment Details
Target: chr1 (Bit Score: 607; Significance: 0; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 607; E-Value: 0
Query Start/End: Original strand, 18 - 730
Target Start/End: Complemental strand, 45534389 - 45533674
Alignment:
Q  18 atgacaaccgctactggaactggattgctatgcctgattccaggtttgatcttaatttttctatttgtcttattttaattgtgttcattaacttaattaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45534389 atgacaaccgctactggaactggattgctatgcctgattccaggtttgatcttaatttttctatttgtcttattttaattgtgttcattaacttaattaa 45534290  T
Q  118 ctgataagtaatatgaagcacggacaccggacacaatac--ga-acacctaaatttttagaaaattacataatttagtgtaagtatatgtgtcggtgtgg 214  Q
    ||||||||||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  45534289 ctgataagtaatatgaagcacggacacgggacacaatactggacacagctaaatttttagaaaatcacataatttagtgtaagtatatatgtcggtgtgg 45534190  T
Q  215 tatggtacatgtgtctgacatagggacacaccttatcctagcagtgtttgtgcttcataattaggtaataaccaaccaatacgagtatcatccatcatta 314  Q
    | ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45534189 tgtggtacatgtgtctgacatagggacacgccttatccgaggagtgtttgtgcttcataattaggtaataaccaaccaatatgagtatcatccatcatta 45534090  T
Q  315 acttaattaacttttattgacattttatttgcacctttatgaatgctagatatgtaaattgacgggtcacactcaacatttttaatgtgttctgtttctc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45534089 acttaattaacttttattgacattttatttgcacctttatgaatgctagatatgtaaattgacgggtcacactcaacatttttaatgtgttctgtttgtc 45533990  T
Q  415 tcttacatttctcctcattttctggttcctcgannnnnnnaagctccaggttggccaannnnnnnccccttcattttctcacttttattggtttctttac 514  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  45533989 tcttacatttctcctcattttctggttcctcgatttttttaagctccaggttggccaattttttttcccttcattttctcacttttattggtttctttac 45533890  T
Q  515 cttctctcttgcatgttttaaaattgttctttctcatttcttggcgaattgttcattccatttcattgaatgtttcatatctgagttcatactgttgatg 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45533889 cttctctcttgcatgttttaaaattgttctttctcatttcttggcgaattgttcattccatttcattgaatgtttcatatctgagttcatactgttgatg 45533790  T
Q  615 gatcctattcccctcgtcaaggaatctttcatctatgcaagatgaaaaacaatgagaggttgaatatgccattagcccttatctcttgtaccgggaacca 714  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45533789 gatcctattcccctcgtcaaggaatctttcatctatgcaagatgaaaaacaatgagaggttgaatatgccattagcccttatctcttgtaccgggaacca 45533690  T
Q  715 actgacttttcatctc 730  Q
    ||||||||||| ||||    
T  45533689 actgacttttcttctc 45533674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 551 - 681
Target Start/End: Complemental strand, 35213343 - 35213217
Alignment:
Q  551 tttcttggcgaattgttcattccatttcattgaatgtttcatatctgagttcatactgttgatggatcctattcccctcgtcaaggaatctttcatctat 650  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||     ||||| ||||||||||||  | ||||| || |||||| | ||    
T  35213343 tttcttggcgaattgttcattccatttccttgaatatttcatatgtgagttca----attgattgatcctattccctccatcaagtaaactttcagcaat 35213248  T
Q  651 gcaagatgaaaaacaatgagaggttgaatat 681  Q
    ||| ||| |||||  ||||||||||||||||    
T  35213247 gcatgataaaaaaacatgagaggttgaatat 35213217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 35216935 - 35216859
Alignment:
Q  38 tggattgctatgcctgattccaggtttgatcttaatttttctatttgtcttattttaattgtgttcattaacttaat 114  Q
    ||||||| | |||||||||  ||||| | |||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  35216935 tggattgttgtgcctgattataggttagctcttaacttttccatttgttttattttaattgtgttcattaacttaat 35216859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 444
Target Start/End: Complemental strand, 35202786 - 35202747
Alignment:
Q  405 tctgtttctctcttacatttctcctcattttctggttcct 444  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  35202786 tctgtttctctcttacaattctcctcattttctggttcct 35202747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 35272896 - 35272837
Alignment:
Q  26 cgctactggaactggattgctatgcctgattccaggtttgatcttaatttttctatttgt 85  Q
    ||||| |||||||||||| ||||||||||||||||||| | |||| | ||||||||||||    
T  35272896 cgctattggaactggatttctatgcctgattccaggttagctctttaattttctatttgt 35272837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 39130812 - 39130769
Alignment:
Q  169 ttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgt 39130769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 488 - 586
Target Start/End: Complemental strand, 35216723 - 35216625
Alignment:
Q  488 ttttctcacttttattggtttctttaccttctctcttgcatgttttaaaattgttctttctcatttcttggcgaattgttcattccatttcattgaatg 586  Q
    ||||||||  ||||||| |||||| |||||| | |||| |||||||||   | ||||||||| ||||||||| |||| ||||||||||||  |||||||    
T  35216723 ttttctcatgtttattgctttcttcaccttcacgcttgtatgttttaactctattctttctcctttcttggcaaattattcattccatttacttgaatg 35216625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 30749853 - 30749897
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||    
T  30749853 tttttagaaaatcacataattcagtgtaattatatgtgtcggtgt 30749897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 30771304 - 30771348
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||    
T  30771304 tttttagaaaatcacataattcagtgtaattatatgtgtcggtgt 30771348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 35213549 - 35213469
Alignment:
Q  35 aactggattgctatgcctgattccaggtttgatcttaatttttctatttgtct-tattttaattgtgttcattaacttaat 114  Q
    |||||||||| | |||||||||| ||||| | |||||| ||||| ||||   | |||||||||||||||||||||||||||    
T  35213549 aactggattgatgtgcctgattctaggttagttcttaacttttcaattttattatattttaattgtgttcattaacttaat 35213469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 63
Target Start/End: Complemental strand, 35203150 - 35203119
Alignment:
Q  32 tggaactggattgctatgcctgattccaggtt 63  Q
    ||||||||||||||||||||||||||||||||    
T  35203150 tggaactggattgctatgcctgattccaggtt 35203119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 39953191 - 39953148
Alignment:
Q  169 ttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||||||||| |||||||||||||||| | |||||||||||||    
T  39953191 ttttagaaaatcacataatttagtgtaattgtatgtgtcggtgt 39953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 43638196 - 43638271
Alignment:
Q  32 tggaactggattgctatgcctgattccaggtttgatcttaattttt-ctatttgtcttattttaattgtgttcattaactt 111  Q
    |||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||||  ||||   |||||||||||||||||    
T  43638196 tggaactgtatttctatgcccgattccaggtttgctcttaattttttctatttgt--tatt---attgtgttcattaactt 43638271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 7353532 - 7353495
Alignment:
Q  175 aaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  7353532 aaaattacataatttagtgtaattatatatgtcggtgt 7353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 35222755 - 35222706
Alignment:
Q  35 aactggattgctatgcctgattccaggtttgatcttaatttttctatttg 84  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||| |||||    
T  35222755 aactggactgctatgcctgattctaggtttgttcttaacttttccatttg 35222706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 18213079 - 18213035
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  18213079 tttttagaaaatcacataatttagtgtaattatatgtgtcggtgt 18213035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 7328732 - 7328693
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  7328732 agaaaataacataatttagtgtaattatatgtgtcggtgt 7328693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 2948697 - 2948739
Alignment:
Q  169 ttttagaaaattacataatttagtgtaagtatatgtgtcggtg 211  Q
    ||||||||||| || ||||||||||||| ||||||||||||||    
T  2948697 ttttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 8160434 - 8160467
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgt 206  Q
    |||||||||||||||||||||||| |||||||||    
T  8160434 agaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 15902842 - 15902879
Alignment:
Q  175 aaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  15902842 aaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 27732280 - 27732243
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgtcggt 210  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  27732280 agaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 34785028 - 34784984
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  34785028 tttttagaaaatcacataatttagtgtaattatatgtgtcggtgt 34784984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 20242773 - 20242668
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgtggtatggtacatgtgtctgacatagggacacaccttatcctagcagtgtttgtgc 267  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||| | |    ||| ||||||||||   |||||| |||||||| |  ||||| |||||    
T  20242773 tttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgc 20242674  T
Q  268 ttcata 273  Q
    ||||||    
T  20242673 ttcata 20242668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 20922974 - 20922930
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||    
T  20922974 tttttagaaaatcacataatttagtgtaattatatgtgtctgtgt 20922930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 36838561 - 36838600
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36838561 agaaaattacataatttagtgtaattatatgtgtcggtgt 36838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 39758285 - 39758327
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggt 210  Q
    |||||||||||| |||||||| ||||||| |||||||||||||    
T  39758285 tttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 7086813 - 7086852
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  7086813 agaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 9195795 - 9195756
Alignment:
Q  173 agaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  9195795 agaaaatgacataatttagtgtaattatatgtgtcggtgt 9195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 17327702 - 17327657
Alignment:
Q  167 atttttagaaaattacataatttagtgtaagtatatgtgtcggtgt 212  Q
    ||||| ||||||| |||||||||||||||| |||||||||| ||||    
T  17327702 attttgagaaaatcacataatttagtgtaactatatgtgtcagtgt 17327657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 26902217 - 26902171
Alignment:
Q  172 tagaaaattacataatttagtgtaagtatatgtgtcggtgtggtatg 218  Q
    |||||||| |||||||| ||||||| ||||||||||||||| |||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatg 26902171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 18964190 - 18964235
Alignment:
Q  168 tttttagaaaattacataatttagtgtaagtatatgtgtcggtgtg 213  Q
    |||||||||||| |||||||| | ||||| ||||||||||||||||    
T  18964190 tttttagaaaatcacataattcaatgtaattatatgtgtcggtgtg 18964235  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 35222950 - 35223056
Alignment:
Q  167 atttttagaaaattacataatttagtgtaagtatatgtgtcggtgtggtatggtacatgtgtctgacatagggacacaccttatcctagcagtgtttgtg 266  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||||| | |    ||| ||||||||||  ||||||| | |||||| || |||||  |||    
T  35222950 atttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtg 35223049  T
Q  267 cttcata 273  Q
    |||||||    
T  35223050 cttcata 35223056  T

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