View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19259_high_14 (Length: 307)

Name: NF19259_high_14
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19259_high_14
NF19259_high_14
[»] chr4 (52 HSPs)
chr4 (19-294)||(3175752-3176026)
chr4 (187-264)||(21157736-21157813)
chr4 (162-242)||(54325084-54325164)
chr4 (164-242)||(2996518-2996596)
chr4 (166-248)||(51630058-51630140)
chr4 (176-245)||(10192241-10192310)
chr4 (187-264)||(23819057-23819134)
chr4 (173-242)||(25885813-25885882)
chr4 (165-290)||(52735068-52735192)
chr4 (173-238)||(53626730-53626795)
chr4 (176-240)||(55870390-55870454)
chr4 (164-239)||(24160545-24160620)
chr4 (162-208)||(3155546-3155592)
chr4 (186-264)||(29263337-29263415)
chr4 (162-244)||(46415837-46415919)
chr4 (162-204)||(51044544-51044586)
chr4 (176-241)||(437480-437545)
chr4 (183-244)||(19429533-19429594)
chr4 (161-242)||(49219081-49219162)
chr4 (165-241)||(17884014-17884090)
chr4 (178-242)||(28581957-28582021)
chr4 (164-240)||(46796963-46797039)
chr4 (176-240)||(49085946-49086010)
chr4 (162-242)||(56480291-56480371)
chr4 (187-242)||(927260-927315)
chr4 (162-208)||(4191682-4191729)
chr4 (162-241)||(6364092-6364171)
chr4 (162-241)||(11802478-11802556)
chr4 (173-236)||(24929447-24929510)
chr4 (173-240)||(30207620-30207686)
chr4 (161-208)||(34368819-34368866)
chr4 (176-243)||(43372015-43372082)
chr4 (162-201)||(54277402-54277441)
chr4 (162-208)||(4798640-4798686)
chr4 (166-240)||(28232492-28232566)
chr4 (182-244)||(44319912-44319974)
chr4 (162-204)||(47970261-47970303)
chr4 (162-208)||(52645830-52645876)
chr4 (181-242)||(927438-927499)
chr4 (175-208)||(3662304-3662337)
chr4 (183-236)||(22471295-22471348)
chr4 (181-242)||(52746887-52746948)
chr4 (162-198)||(1203208-1203244)
chr4 (164-204)||(2702985-2703025)
chr4 (173-241)||(4071836-4071904)
chr4 (173-237)||(8130128-8130192)
chr4 (162-202)||(19040202-19040242)
chr4 (168-208)||(19670876-19670916)
chr4 (173-217)||(20936074-20936118)
chr4 (162-202)||(21193941-21193981)
chr4 (176-240)||(40174520-40174584)
chr4 (164-232)||(42321936-42322004)
[»] chr5 (42 HSPs)
chr5 (167-264)||(14295454-14295551)
chr5 (163-248)||(9202789-9202874)
chr5 (162-239)||(12407711-12407788)
chr5 (163-242)||(26516344-26516423)
chr5 (173-244)||(28586811-28586882)
chr5 (183-242)||(41277397-41277456)
chr5 (162-248)||(32172596-32172682)
chr5 (184-236)||(32059642-32059694)
chr5 (162-241)||(16889678-16889757)
chr5 (189-244)||(41957496-41957551)
chr5 (173-271)||(18875315-18875413)
chr5 (164-242)||(39594753-39594830)
chr5 (162-208)||(40590470-40590516)
chr5 (162-271)||(4855641-4855750)
chr5 (162-203)||(7096213-7096254)
chr5 (183-260)||(14257429-14257506)
chr5 (184-248)||(26209454-26209519)
chr5 (162-263)||(30217025-30217126)
chr5 (176-253)||(36639479-36639556)
chr5 (162-207)||(39128582-39128627)
chr5 (162-198)||(4014515-4014551)
chr5 (162-242)||(12425514-12425594)
chr5 (162-202)||(12595538-12595578)
chr5 (181-253)||(36539708-36539780)
chr5 (162-238)||(37063125-37063201)
chr5 (181-233)||(39750105-39750157)
chr5 (182-241)||(27772686-27772745)
chr5 (173-208)||(29117011-29117046)
chr5 (166-237)||(42569032-42569103)
chr5 (173-271)||(12595758-12595856)
chr5 (162-208)||(28578835-28578881)
chr5 (162-204)||(35135747-35135789)
chr5 (162-236)||(42583092-42583166)
chr5 (163-208)||(11615452-11615497)
chr5 (165-239)||(14599353-14599429)
chr5 (173-210)||(35095862-35095899)
chr5 (164-245)||(35960359-35960439)
chr5 (218-246)||(8089803-8089831)
chr5 (168-208)||(10280657-10280697)
chr5 (162-290)||(12460000-12460127)
chr5 (219-271)||(25705677-25705729)
chr5 (162-242)||(39105407-39105487)
[»] chr6 (40 HSPs)
chr6 (166-290)||(25099990-25100114)
chr6 (162-237)||(29274281-29274356)
chr6 (162-271)||(33500499-33500608)
chr6 (162-209)||(4420560-4420607)
chr6 (163-244)||(281893-281974)
chr6 (164-239)||(9093606-9093681)
chr6 (173-240)||(10154175-10154242)
chr6 (165-242)||(1402942-1403019)
chr6 (181-245)||(3155138-3155202)
chr6 (162-245)||(33068604-33068688)
chr6 (162-242)||(33787792-33787872)
chr6 (165-240)||(2027455-2027530)
chr6 (164-243)||(4006659-4006738)
chr6 (162-241)||(10016488-10016567)
chr6 (162-245)||(32975921-32976004)
chr6 (163-245)||(22742310-22742392)
chr6 (162-231)||(323754-323823)
chr6 (162-247)||(33911324-33911408)
chr6 (165-237)||(4247113-4247185)
chr6 (162-242)||(7354147-7354227)
chr6 (164-244)||(24782004-24782084)
chr6 (185-265)||(25426136-25426216)
chr6 (162-206)||(30865425-30865469)
chr6 (178-241)||(3785748-3785811)
chr6 (173-264)||(26491628-26491719)
chr6 (166-239)||(326399-326473)
chr6 (162-204)||(2514645-2514687)
chr6 (162-244)||(2727901-2727983)
chr6 (164-238)||(3204593-3204667)
chr6 (161-290)||(8010299-8010428)
chr6 (162-208)||(20671946-20671992)
chr6 (162-208)||(24836280-24836326)
chr6 (181-242)||(1497943-1498004)
chr6 (163-208)||(24774702-24774747)
chr6 (163-208)||(27857319-27857364)
chr6 (163-204)||(30784501-30784542)
chr6 (162-263)||(33067102-33067202)
chr6 (176-244)||(14492259-14492327)
chr6 (164-245)||(31807890-31807972)
chr6 (182-237)||(33817823-33817879)
[»] chr1 (64 HSPs)
chr1 (182-290)||(30257646-30257754)
chr1 (176-264)||(44940300-44940386)
chr1 (162-248)||(37842396-37842482)
chr1 (162-240)||(49517013-49517091)
chr1 (182-271)||(5150900-5150989)
chr1 (164-244)||(33527192-33527272)
chr1 (161-236)||(40304107-40304182)
chr1 (176-270)||(4363651-4363745)
chr1 (162-264)||(48830101-48830203)
chr1 (163-264)||(16322793-16322894)
chr1 (174-247)||(34179914-34179987)
chr1 (162-242)||(4276683-4276763)
chr1 (182-242)||(4548684-4548744)
chr1 (173-245)||(9656604-9656676)
chr1 (182-242)||(12477334-12477394)
chr1 (182-242)||(45205031-45205091)
chr1 (162-241)||(43029450-43029528)
chr1 (176-242)||(15566683-15566749)
chr1 (167-241)||(17631149-17631223)
chr1 (163-245)||(25944377-25944458)
chr1 (166-271)||(30259504-30259610)
chr1 (163-264)||(35080094-35080196)
chr1 (163-208)||(6265038-6265083)
chr1 (162-242)||(23544686-23544767)
chr1 (162-207)||(23895279-23895324)
chr1 (163-239)||(1393069-1393145)
chr1 (162-238)||(1730835-1730910)
chr1 (181-241)||(10581125-10581185)
chr1 (162-290)||(17269193-17269321)
chr1 (181-241)||(27738228-27738288)
chr1 (162-242)||(34952158-34952238)
chr1 (181-245)||(37272630-37272694)
chr1 (162-242)||(45999335-45999415)
chr1 (176-236)||(46980182-46980242)
chr1 (166-241)||(1255479-1255554)
chr1 (182-245)||(7218118-7218181)
chr1 (162-289)||(7262518-7262645)
chr1 (173-208)||(15360848-15360883)
chr1 (173-248)||(45769785-45769859)
chr1 (162-201)||(50319235-50319274)
chr1 (192-242)||(8130409-8130459)
chr1 (166-244)||(15437910-15437988)
chr1 (162-208)||(23373371-23373417)
chr1 (188-242)||(25006081-25006135)
chr1 (162-208)||(36151586-36151632)
chr1 (173-291)||(44031997-44032115)
chr1 (166-271)||(3924571-3924676)
chr1 (162-263)||(6932987-6933088)
chr1 (176-253)||(7273975-7274052)
chr1 (162-242)||(17422985-17423066)
chr1 (176-237)||(30371105-30371166)
chr1 (163-208)||(38867914-38867959)
chr1 (163-208)||(46499935-46499980)
chr1 (162-248)||(49557084-49557172)
chr1 (173-242)||(51695542-51695610)
chr1 (162-202)||(289183-289223)
chr1 (162-198)||(3887723-3887759)
chr1 (162-198)||(7028235-7028271)
chr1 (162-198)||(9572199-9572235)
chr1 (162-242)||(15579426-15579505)
chr1 (176-240)||(28467356-28467420)
chr1 (164-208)||(34380390-34380434)
chr1 (162-242)||(43420201-43420281)
chr1 (173-237)||(48064263-48064327)
[»] scaffold0020 (1 HSPs)
scaffold0020 (175-264)||(159998-160086)
[»] chr2 (61 HSPs)
chr2 (20-129)||(44011421-44011530)
chr2 (163-246)||(15377709-15377792)
chr2 (163-245)||(17952745-17952827)
chr2 (182-290)||(29300608-29300716)
chr2 (169-248)||(33256690-33256769)
chr2 (162-244)||(34054946-34055028)
chr2 (182-248)||(43141834-43141900)
chr2 (162-247)||(13866832-13866917)
chr2 (181-238)||(33942112-33942169)
chr2 (173-253)||(42817412-42817492)
chr2 (162-237)||(39567846-39567921)
chr2 (162-244)||(29935946-29936028)
chr2 (173-262)||(3673761-3673850)
chr2 (166-271)||(9878700-9878805)
chr2 (181-242)||(11513860-11513921)
chr2 (181-242)||(14666510-14666571)
chr2 (162-271)||(28933767-28933876)
chr2 (162-242)||(5133715-5133795)
chr2 (162-242)||(10143115-10143195)
chr2 (162-242)||(18962085-18962165)
chr2 (183-242)||(5043607-5043666)
chr2 (173-264)||(6988069-6988160)
chr2 (162-253)||(10563594-10563685)
chr2 (164-290)||(1742031-1742157)
chr2 (162-244)||(32694155-32694237)
chr2 (173-247)||(37053548-37053622)
chr2 (181-239)||(40145424-40145482)
chr2 (163-271)||(1939350-1939458)
chr2 (163-208)||(32098389-32098434)
chr2 (183-248)||(35485881-35485946)
chr2 (173-253)||(15281441-15281521)
chr2 (166-242)||(18066075-18066151)
chr2 (162-198)||(26143732-26143768)
chr2 (173-244)||(35099644-35099716)
chr2 (163-203)||(40943853-40943893)
chr2 (184-242)||(7103529-7103588)
chr2 (181-244)||(22681230-22681293)
chr2 (163-202)||(31461382-31461421)
chr2 (162-237)||(35755554-35755629)
chr2 (165-208)||(44438920-44438963)
chr2 (162-204)||(3102636-3102678)
chr2 (162-208)||(5045238-5045284)
chr2 (162-244)||(12215750-12215832)
chr2 (163-245)||(28803550-28803632)
chr2 (162-236)||(29430699-29430772)
chr2 (173-223)||(33192147-33192197)
chr2 (162-208)||(35459853-35459899)
chr2 (182-236)||(35539686-35539740)
chr2 (195-245)||(37276722-37276772)
chr2 (162-208)||(40837509-40837555)
chr2 (164-210)||(43530190-43530236)
chr2 (162-243)||(1869831-1869910)
chr2 (184-241)||(29503131-29503188)
chr2 (173-242)||(36863672-36863741)
chr2 (163-208)||(40758967-40759012)
chr2 (173-238)||(42592293-42592358)
chr2 (219-263)||(32821809-32821853)
chr2 (181-245)||(37292391-37292455)
chr2 (162-202)||(38239638-38239678)
chr2 (173-209)||(41851245-41851281)
chr2 (191-271)||(43205281-43205361)
[»] chr3 (57 HSPs)
chr3 (163-243)||(38462225-38462305)
chr3 (162-290)||(52618946-52619074)
chr3 (163-245)||(24887327-24887409)
chr3 (162-253)||(22232769-22232860)
chr3 (163-264)||(28306102-28306203)
chr3 (162-238)||(3182413-3182489)
chr3 (173-248)||(33405208-33405283)
chr3 (164-242)||(39602257-39602334)
chr3 (162-244)||(40122798-40122879)
chr3 (163-244)||(36646427-36646508)
chr3 (163-208)||(49586997-49587042)
chr3 (182-253)||(20502104-20502176)
chr3 (189-244)||(1217845-1217900)
chr3 (183-242)||(2201092-2201151)
chr3 (162-241)||(24235731-24235810)
chr3 (181-240)||(31337450-31337509)
chr3 (166-241)||(36783382-36783457)
chr3 (190-245)||(41452494-41452549)
chr3 (162-236)||(1395614-1395688)
chr3 (162-208)||(34254890-34254936)
chr3 (186-264)||(48286835-48286913)
chr3 (162-204)||(53457320-53457362)
chr3 (162-231)||(20192664-20192733)
chr3 (189-290)||(20467185-20467286)
chr3 (162-265)||(24158527-24158629)
chr3 (164-208)||(30956707-30956751)
chr3 (164-208)||(30972519-30972563)
chr3 (176-253)||(33965525-33965604)
chr3 (162-201)||(905058-905097)
chr3 (182-241)||(1816546-1816605)
chr3 (165-208)||(22667371-22667414)
chr3 (165-208)||(22724010-22724053)
chr3 (164-239)||(23785200-23785275)
chr3 (162-225)||(24605080-24605143)
chr3 (162-217)||(41028923-41028978)
chr3 (162-221)||(51278225-51278284)
chr3 (162-241)||(52597631-52597710)
chr3 (162-208)||(2128332-2128378)
chr3 (164-238)||(10101527-10101601)
chr3 (164-238)||(10212452-10212526)
chr3 (162-264)||(27792815-27792917)
chr3 (162-208)||(44061104-44061150)
chr3 (162-208)||(44284139-44284185)
chr3 (167-244)||(237345-237422)
chr3 (162-207)||(8007777-8007822)
chr3 (182-239)||(20220403-20220460)
chr3 (173-242)||(29600772-29600841)
chr3 (164-197)||(37689178-37689211)
chr3 (163-208)||(46778308-46778353)
chr3 (164-208)||(15304428-15304472)
chr3 (162-241)||(21865521-21865598)
chr3 (200-248)||(22343589-22343637)
chr3 (184-264)||(23315591-23315671)
chr3 (162-242)||(25183035-25183115)
chr3 (173-241)||(33307500-33307568)
chr3 (162-202)||(34318031-34318071)
chr3 (225-273)||(44284096-44284144)
[»] chr8 (63 HSPs)
chr8 (173-245)||(8799359-8799431)
chr8 (162-245)||(34080310-34080393)
chr8 (176-245)||(30013175-30013244)
chr8 (162-238)||(42597344-42597420)
chr8 (186-241)||(6864507-6864562)
chr8 (181-244)||(34770854-34770917)
chr8 (219-273)||(8578573-8578627)
chr8 (162-247)||(1470898-1470983)
chr8 (184-273)||(6509319-6509408)
chr8 (162-235)||(9699944-9700017)
chr8 (164-241)||(10727142-10727218)
chr8 (163-244)||(29973025-29973106)
chr8 (181-253)||(4763880-4763952)
chr8 (173-233)||(29699208-29699268)
chr8 (162-241)||(11795035-11795114)
chr8 (162-201)||(29056079-29056118)
chr8 (182-264)||(2093242-2093324)
chr8 (162-208)||(3537112-3537158)
chr8 (162-244)||(4558741-4558823)
chr8 (162-264)||(7918798-7918900)
chr8 (162-204)||(14949831-14949873)
chr8 (162-208)||(27465316-27465362)
chr8 (183-245)||(29592576-29592638)
chr8 (162-271)||(13652158-13652267)
chr8 (162-271)||(13710801-13710910)
chr8 (181-241)||(2605981-2606041)
chr8 (168-244)||(27728066-27728142)
chr8 (162-206)||(39392744-39392788)
chr8 (164-208)||(40728499-40728543)
chr8 (162-241)||(7514521-7514600)
chr8 (173-208)||(10437839-10437874)
chr8 (162-241)||(28769387-28769466)
chr8 (162-265)||(39551233-39551336)
chr8 (164-242)||(9836901-9836979)
chr8 (183-237)||(12361156-12361210)
chr8 (162-208)||(14482145-14482191)
chr8 (221-271)||(18931316-18931366)
chr8 (162-204)||(26215439-26215481)
chr8 (162-204)||(26820142-26820184)
chr8 (182-264)||(28784820-28784902)
chr8 (173-202)||(2100759-2100788)
chr8 (163-208)||(6918260-6918305)
chr8 (162-195)||(10114433-10114466)
chr8 (163-208)||(11000642-11000687)
chr8 (173-206)||(11119082-11119115)
chr8 (187-264)||(11813130-11813207)
chr8 (162-211)||(27320259-27320307)
chr8 (164-241)||(33209268-33209345)
chr8 (176-245)||(34551077-34551146)
chr8 (162-211)||(34788505-34788554)
chr8 (162-242)||(35298524-35298605)
chr8 (163-208)||(35534942-35534987)
chr8 (184-248)||(787147-787211)
chr8 (162-202)||(2364560-2364600)
chr8 (164-208)||(2698738-2698782)
chr8 (173-237)||(5071019-5071083)
chr8 (162-242)||(16210933-16211013)
chr8 (176-208)||(20672729-20672761)
chr8 (162-242)||(26056028-26056108)
chr8 (164-196)||(29168145-29168177)
chr8 (162-242)||(30627949-30628029)
chr8 (182-238)||(33912096-33912152)
chr8 (173-237)||(35374425-35374489)
[»] chr7 (67 HSPs)
chr7 (162-245)||(5006553-5006636)
chr7 (163-242)||(27548207-27548286)
chr7 (162-232)||(2894760-2894830)
chr7 (168-245)||(40689030-40689107)
chr7 (162-242)||(27481341-27481421)
chr7 (162-241)||(28340444-28340523)
chr7 (184-263)||(29363483-29363562)
chr7 (166-271)||(44910551-44910656)
chr7 (162-226)||(35536050-35536114)
chr7 (167-242)||(30456497-30456572)
chr7 (181-264)||(44151505-44151588)
chr7 (162-240)||(1417207-1417285)
chr7 (162-208)||(7244645-7244691)
chr7 (162-208)||(10079421-10079467)
chr7 (163-253)||(17989059-17989149)
chr7 (164-239)||(29274884-29274961)
chr7 (166-208)||(30160971-30161013)
chr7 (182-244)||(31338471-31338533)
chr7 (174-239)||(9527140-9527205)
chr7 (162-242)||(2048088-2048167)
chr7 (191-243)||(5369737-5369789)
chr7 (184-248)||(12110325-12110389)
chr7 (181-253)||(23918919-23918991)
chr7 (162-242)||(27492738-27492818)
chr7 (173-237)||(34083577-34083641)
chr7 (176-208)||(46531490-46531522)
chr7 (170-242)||(46825049-46825121)
chr7 (162-241)||(3802187-3802266)
chr7 (183-262)||(7274424-7274503)
chr7 (162-205)||(31341137-31341180)
chr7 (181-244)||(38010676-38010739)
chr7 (163-202)||(42656459-42656498)
chr7 (162-241)||(45593767-45593846)
chr7 (219-273)||(514767-514821)
chr7 (162-264)||(3610765-3610867)
chr7 (181-263)||(4966118-4966200)
chr7 (164-242)||(5628613-5628691)
chr7 (166-244)||(21453241-21453319)
chr7 (165-243)||(22759132-22759210)
chr7 (162-208)||(24975847-24975893)
chr7 (162-204)||(27626209-27626251)
chr7 (173-271)||(28165045-28165143)
chr7 (162-200)||(28178912-28178950)
chr7 (182-244)||(28340889-28340951)
chr7 (181-239)||(31002723-31002781)
chr7 (162-208)||(33894566-33894611)
chr7 (162-204)||(35808989-35809031)
chr7 (162-208)||(43152983-43153029)
chr7 (163-201)||(45813268-45813306)
chr7 (164-253)||(1350278-1350367)
chr7 (184-265)||(3468579-3468660)
chr7 (173-202)||(7453485-7453514)
chr7 (175-243)||(23434204-23434273)
chr7 (166-211)||(24973891-24973936)
chr7 (200-245)||(28702731-28702776)
chr7 (162-195)||(33673021-33673054)
chr7 (163-208)||(39591548-39591593)
chr7 (163-235)||(46081977-46082050)
chr7 (181-253)||(1373576-1373648)
chr7 (164-196)||(4970881-4970913)
chr7 (163-203)||(5715124-5715164)
chr7 (214-242)||(18350754-18350782)
chr7 (168-208)||(19123198-19123238)
chr7 (189-237)||(29278629-29278677)
chr7 (217-265)||(40439052-40439100)
chr7 (162-242)||(47177579-47177659)
chr7 (162-202)||(49060483-49060523)
[»] scaffold0092 (1 HSPs)
scaffold0092 (176-253)||(40188-40265)
[»] scaffold0590 (1 HSPs)
scaffold0590 (162-204)||(1159-1201)
[»] scaffold0275 (1 HSPs)
scaffold0275 (162-204)||(2774-2816)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-242)||(27519-27599)
[»] scaffold0508 (1 HSPs)
scaffold0508 (162-243)||(9821-9902)
[»] scaffold0053 (1 HSPs)
scaffold0053 (176-245)||(5643-5712)
[»] scaffold0110 (1 HSPs)
scaffold0110 (185-241)||(4271-4327)


Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 3175752 - 3176026
Alignment:
Q  19 ccaaagggacttaatccaccatcatcaaacatgttatacttcagtggtccacatttggctcttgctatcaaaactggacttgtcactggaatcttgtctc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3175752 ccaaagggacttaatccaccatcatcaaacatgttatacttcagtggtccacatttggctcttgctatcaaaactggacttgtcactggaatcttgtctc 3175851  T
Q  119 tcactgtaagctttctcaaacttagaaaacataatcaaccatggtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagt 218  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  3175852 tcactgtaagctttctcaaacttagaaa-cataatcaaccatggtataagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagt 3175950  T
Q  219 tataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaataccacatgaacatgtcattgtt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3175951 tataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaataccacatgtacatgtcattgtt 3176026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 21157736 - 21157813
Alignment:
Q  187 ataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||| |||||||||||||||| || ||||| |||||| |||||||||| |||||||||||| |||| | ||||||||    
T  21157736 ataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataag 21157813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 54325164 - 54325084
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| ||||||  |||||||||||||||||||||||||||| ||  |||| |||||||| |||||| ||||||||    
T  54325164 gtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatc 54325084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 2996518 - 2996596
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||| ||| || ||||||||||| ||||||| |||||  |  ||||||||||| |||||||||||||||||    
T  2996518 ataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatc 2996596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 51630058 - 51630140
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||| || ||||||||||||||||||||||| ||| |||||  |  |||| |||||||| ||||||||||||||| |||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaag 51630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 10192241 - 10192310
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||| ||||||||| |||||||||||| ||||| ||  ||||||||||| |||||||| |||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctg 10192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 23819057 - 23819134
Alignment:
Q  187 ataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    |||||||  ||||||||||||| ||  ||||||||||  ||||||||||||||||| ||||| |||| ||||||||||    
T  23819057 ataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataag 23819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 25885813 - 25885882
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||||||| ||| ||||| |  ||||| |||||| |||||||||||| ||||    
T  25885813 ttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatc 25885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 290
Target Start/End: Original strand, 52735068 - 52735192
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||| |||| || |||||||||||||||||||||| |  || ||  ||||||||| | ||||||| ||||||||| ||||| |||| | ||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataag 52735167  T
Q  265 tcgaaaataccacatgaacatgtcat 290  Q
     | |||||| || ||| |||||||||    
T  52735168 -ctaaaataacatatggacatgtcat 52735192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 53626730 - 53626795
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||||| |||||||||||||||| ||||| ||||| ||  |||| ||||||||||||||||||||    
T  53626730 ttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 55870454 - 55870390
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||| |||||||| ||||||||||||||||||| ||  |||| |||||| |||||||||||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 24160620 - 24160545
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||||  ||||||| |||||||||| ||||| ||||||| ||| || ||||| |||||| ||||||||||||||    
T  24160620 ataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 3155546 - 3155592
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||||    
T  3155546 gtataagctatttctatagcaaaagataaaataaagttaaattgttt 3155592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 264
Target Start/End: Original strand, 29263337 - 29263415
Alignment:
Q  186 gataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||||||| | | ||||| ||| ||||  ||||| |||||||||||||||||||| || |||||| ||||||||    
T  29263337 gataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataag 29263415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 46415919 - 46415837
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||| ||| ||| ||||||||||||||   ||||||||||| ||   |||||||||| | |||||||||||||||||    
T  46415919 gtataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctatcct 46415837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 51044586 - 51044544
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  51044586 gtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 437545 - 437480
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||||||||||||| ||| ||| | ||  |||||| |||| ||||||||||||||||    
T  437545 tatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 19429594 - 19429533
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||||||||||||||||||||||  |  |||||  |||||| |||||||||||||||||    
T  19429594 aaagataaaataaagtcaaactgtttttatataagtcgtaagctcttttcataagctatcct 19429533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 49219081 - 49219162
Alignment:
Q  161 ggtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| || ||||||| ||||| |||||||||||||||| | ||| ||  |||| |||||| ||||||||||| |||||    
T  49219081 ggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 17884014 - 17884090
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||| ||||||| |||||||||||||||||| ||| |||||     |||||||| || ||||||||||||||||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctat 17884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 28582021 - 28581957
Alignment:
Q  178 tagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||||||||||||||| ||| ||  || ||||| || |||||||| ||||||||    
T  28582021 tagcaaaagataaaataaagtcaaactattttcagatatgttatgagttgttttcaaaagctatc 28581957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 46796963 - 46797039
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||||||| ||  ||| |||| ||||||||||| ||||  ||||||||  ||||||||||| |||||||||||||||    
T  46796963 ataagctattttcataacaaacgataaaataaattcaatatgtttccatataagttataagttgttttcataagcta 46797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 49085946 - 49086010
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||| ||||||||||||||| |||||||| ||| ||   |||||||||| |||||||||||||||    
T  49085946 tataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 56480291 - 56480371
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||| ||| ||||||| |||||||||| ||| |||||     ||||||||||||||||||||||| |||||    
T  56480291 gtataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataaactatc 56480371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 927260 - 927315
Alignment:
Q  187 ataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||| ||||||||  ||||||||||| ||||||| |||| ||||    
T  927260 ataaaataaagtcaaattgtttccatataagttataagttgttttcttaagttatc 927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 4191682 - 4191729
Alignment:
Q  162 gtataagctacttctatagcaaaagat-aaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  4191682 gtataagctatttctataacaaaagataaaaataaagtcaaactgttt 4191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 6364092 - 6364171
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||||||| |||||||||||||||||| ||| | | | ||  |||| |||||||  ||||||||||||||    
T  6364092 gtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctat 6364171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 11802478 - 11802556
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||||||| |||||||||||||||||||||| | ||  ||  |||| || ||| ||||||||||||||||    
T  11802478 gtataagcta-ttctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctat 11802556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 24929447 - 24929510
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||| ||||||||||||||||||| |||||||| ||   ||| |||||| |||||||||||    
T  24929447 ttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 30207686 - 30207620
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    ||||||| ||||| |||||||||| ||||||||||| ||  |||| |||||| |||||||||||||||    
T  30207686 ttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 34368819 - 34368866
Alignment:
Q  161 ggtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||||| ||||||| |||||||||||| ||||||||| |||||    
T  34368819 ggtataagctatttctataacaaaagataaaacaaagtcaaattgttt 34368866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 43372082 - 43372015
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    |||| |||||||||||||| |||||||||||||  |  |||| ||||| ||| |||||||||||||||    
T  43372082 tataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataagctatcc 43372015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 54277441 - 54277402
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaa 201  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  54277441 gtataaactacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 4798686 - 4798640
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| ||||||||||||||||||| || |||||    
T  4798686 gtataagctatttctatatcaaaagataaaataaagtctaaatgttt 4798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 28232492 - 28232566
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||||| ||||||||||||||||||||| || ||||| | ||||||  |||| ||||| ||| ||||| ||||||    
T  28232492 aagctatttctatagcaaaagataaaatcaaatcaaattatttccatataagctataaactgctttcagaagcta 28232566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 44319912 - 44319974
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||||||||||| |||||||| ||  |||| || ||||| |||| ||||||||||||    
T  44319912 aaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcct 44319974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 47970261 - 47970303
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||    
T  47970261 gtataagctatttctataacaaaagataaaatgaagtcaaact 47970303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 52645876 - 52645830
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| ||||||||||||| || |||||||||||    
T  52645876 gtataagctatttctataacaaaagataaaatcaattcaaactgttt 52645830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 927438 - 927499
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| ||||||||||||||||||| ||  |||| |||||  ||||| |||||||||||    
T  927438 caaaagatgaaataaagtcaaactgttttcatataagctataacttgtttgcataagctatc 927499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 3662304 - 3662337
Alignment:
Q  175 ctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||| ||||||||||||||||||||||||||||    
T  3662304 ctataacaaaagataaaataaagtcaaactgttt 3662337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 22471295 - 22471348
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||||| ||||| |||||||||| ||  ||||||||||| |||||||||||    
T  22471295 aaagataaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 52746948 - 52746887
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||| ||| |||||    |||||  |||||||||||||||||||||||    
T  52746948 caaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatc 52746887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 1203244 - 1203208
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  1203244 gtataagctatttctatagcaaaacataaaataaagt 1203208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 2702985 - 2703025
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||| || ||||||||||||||||||||||| |||||    
T  2702985 ataagctatttatatagcaaaagataaaataaagttaaact 2703025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 4071836 - 4071904
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||| |||||||||||||||||||||| | ||| ||  |||| |||||| |||| | |||||||||    
T  4071836 ttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 8130128 - 8130192
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    ||||||| |||||||||| ||||||||||| | ||| ||  |||| ||||| |||||||||||||    
T  8130128 ttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 19040242 - 19040202
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| |||| ||| |||||||||||||||||||||    
T  19040242 gtataagctatttctttagaaaaagataaaataaagtcaaa 19040202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 19670916 - 19670876
Alignment:
Q  168 gctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||| ||||||| |||||||||||||||| |||||||||||    
T  19670916 gctatttctatatcaaaagataaaataaattcaaactgttt 19670876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 20936118 - 20936074
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaag 217  Q
    ||||||| |||||||||||||||||||||||| ||| || |||||    
T  20936118 ttctataacaaaagataaaataaagtcaaactattttcatgtaag 20936074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 21193941 - 21193981
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| || ||||| |||||||||||||||||||||    
T  21193941 gtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 40174520 - 40174584
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||||||||| ||||| |||||| ||| ||||| ||   ||| ||||||||||||||||||||||    
T  40174520 tatagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagcta 40174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 42322004 - 42321936
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttc 232  Q
    |||||||| || |||| |||| ||||||||||||||||| ||||| ||  ||| ||||||| |||||||    
T  42322004 ataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 14295454 - 14295551
Alignment:
Q  167 agctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||  |||| |||||||||||||| |||||||||||| || |||| ||||| ||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaag 14295551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 9202874 - 9202789
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||||| |||| ||||||||||||||||||||| ||| ||||| ||  ||||  |||||||||||||||||| |||| |||||    
T  9202874 tataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaag 9202789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 12407788 - 12407711
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||||||| ||||||| |||||||||||||||||| || |||||| || ||||||||||||   ||||||||||||    
T  12407788 gtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 26516344 - 26516423
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||| |||| || ||| ||||||||||||||||||||  || ||  |||||||||| ||||||||||||||||||    
T  26516344 tataagctagttctctaacaatagataaaataaagtcaaactactttcatataagttataaactgttttcataagctatc 26516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 28586882 - 28586811
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||| |||||||||||||||||||||||||||| ||  ||| |||||||||||||| |  |||||||||    
T  28586882 ttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcct 28586811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 41277456 - 41277397
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||||||| ||  ||||||| ||| |||||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatc 41277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 32172596 - 32172682
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||| ||| ||||| | ||||||||||||| |||||||  ||||| ||  |||| |||||||||||||||||||||||| |||||    
T  32172596 gtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaag 32172682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 32059694 - 32059642
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||||||||||||||||||||| ||  |||| ||||||||||||||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 16889678 - 16889757
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||| ||| ||||||||||| | ||||||||||||||  |   ||| |||||||||||||||||||||||    
T  16889678 gtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 41957551 - 41957496
Alignment:
Q  189 aaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||| |||| ||| ||||| || ||||||||||||||||||||||||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatcct 41957496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 18875315 - 18875413
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    ||||||| ||||||| |||||||||||||| || || ||   ||||||||||||||||| ||||| ||||||| || |||| | |||| |||| |||||    
T  18875315 ttctatatcaaaagacaaaataaagtcaaattgatttcatacaagttataagctgttttaataagatatcctggagagcttatggaaacaagttgaaaa 18875413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 39594753 - 39594830
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| |||||||| ||||||||||||||||| ||| ||||| |   |||||| ||||||||||||||||| ||||    
T  39594753 ataagctatttctatagaaaaagataaaataaagt-aaattgttttcgcataagttgtaagctgttttcataagatatc 39594830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 40590470 - 40590516
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||    
T  40590470 gtataagctacttctatagaaaaagataaaataaagttatactgttt 40590516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 4855641 - 4855750
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||| ||||| || |||| ||||| |||||||||||| ||| ||||  ||  ||||||||||| ||||||||||| ||||||  ||| ||||  ||||||    
T  4855641 gtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttacagaaat 4855740  T
Q  262 aagtcgaaaa 271  Q
    ||| ||||||    
T  4855741 aagccgaaaa 4855750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 7096254 - 7096213
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaac 203  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  7096254 gtataagctatttctataacaaaagataaaataaagtcaaac 7096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 14257429 - 14257506
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaa 260  Q
    ||||| |||||||| ||||| ||||||||  ||||||||||| ||||||||||| ||||| || || |||||| ||||    
T  14257429 aaagacaaaataaattcaaaatgtttccatataagttataaggtgttttcataaactatcttggagagcttgtggaaa 14257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 26209519 - 26209454
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaag-taagttataagctgttttcataagctatcctgaag 248  Q
    |||||||||||||||| || ||||| |||  |||| |||||||||||||||||||||||| |||||    
T  26209519 aagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatcatgaag 26209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 30217025 - 30217126
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||| | |||||| |||| ||||||||||||||| || |  || || ||||  ||||||||| ||||||||||||||||| || |||| | |||||    
T  30217025 gtataagccatttctatcgcaagagataaaataaagtctaattaatttcacgtaatctataagctgctttcataagctatcctggagagcttatggaaat 30217124  T
Q  262 aa 263  Q
    ||    
T  30217125 aa 30217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 36639479 - 36639556
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||| |||||||||||||||| ||||| ||||| ||   ||||||||  |||||||||||||||||| ||||| ||||    
T  36639479 tataacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagctt 36639556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 39128582 - 39128627
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtt 207  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||    
T  39128582 gtataagctaattctataacaaaagataaaataaagtcaaattgtt 39128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 4014551 - 4014515
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4014551 gtataagctatttctatagcaaaagataaaataaagt 4014515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 12425514 - 12425594
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| || ||||| ||||||||||||||||| ||| ||||| |   |||| ||||||||||||||| ||||||||    
T  12425514 gtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatc 12425594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 12595578 - 12595538
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  12595578 gtataagctatttctatagcaaaagataaaataaattcaaa 12595538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 36539708 - 36539780
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||||||||||||||||||| |||||| ||  |||| |||||| |||||| ||||| ||| |||||| ||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 37063201 - 37063125
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    |||||| ||| ||||||| |||||||||||||||||||||||| ||| ||  ||||||   ||||| ||||||||||    
T  37063201 gtataaactatttctataacaaaagataaaataaagtcaaactattttcatataagttgccagctggtttcataagc 37063125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 39750105 - 39750157
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttca 233  Q
    |||||||||||||||||||||||| ||| ||  |||||||||| |||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataagttataacctgttttca 39750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 27772745 - 27772686
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||| |||||| |||||  |||||||| ||| ||||||||||| ||||||||||||||||    
T  27772745 aaaatataaaacaaagtataactgttttcaaataagttataagttgttttcataagctat 27772686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 29117046 - 29117011
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29117046 ttctataacaaaagataaaataaagtcaaactgttt 29117011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 42569103 - 42569032
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||| ||||||||||||||||||||||||||| || ||||| |   |||| ||||| ||||||| |||||    
T  42569103 aagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataatctgttttgataag 42569032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 12595856 - 12595758
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    ||||||| |||||||||||||||||| ||| ||||| ||  |||  ||| ||||| |||||||||||| | | ||| |||| ||||||| ||| |||||    
T  12595856 ttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaatcagttgaaaa 12595758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 28578835 - 28578881
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| || |||||||||||||||||| ||||||    
T  28578835 gtataagctatttctataacataagataaaataaagtcaagctgttt 28578881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 35135789 - 35135747
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    ||||||| || ||||||| ||||||||||||||||||||||||    
T  35135789 gtataagatatttctataacaaaagataaaataaagtcaaact 35135747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 42583092 - 42583166
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||| || ||||||| |||||||| ||||||||| ||| ||||| |  |||||  |||||||||||||||||    
T  42583092 gtataaggtatttctataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataa 42583166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 11615452 - 11615497
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| || |||| |||||||||||||||||||||| |||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaattgttt 11615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 14599429 - 14599353
Alignment:
Q  165 taagctacttctatagcaaaa--gataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    ||||||| ||||||| |||||  |||||||| |||||||||||||| ||  ||||||||||| |||||  |||||||    
T  14599429 taagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgtttcgataagct 14599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 35095899 - 35095862
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttcc 210  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  35095899 ttctataacaaaagataaaataaagtcaaattgtttcc 35095862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 35960359 - 35960439
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||| ||| |||||||  ||||||||||||||||||||||| ||| ||  |||  |||||| || |||||||||||||||||    
T  35960359 ataaactatttctataataaaagataaaataaagtcaaactattt-catataaactataagttgatttcataagctatcctg 35960439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 8089803 - 8089831
Alignment:
Q  218 ttataagctgttttcataagctatcctga 246  Q
    |||||||||||||||||||||||||||||    
T  8089803 ttataagctgttttcataagctatcctga 8089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 10280697 - 10280657
Alignment:
Q  168 gctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||| ||||||| ||||||||| ||||||||||||||||||    
T  10280697 gctatttctataacaaaagatagaataaagtcaaactgttt 10280657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 12460127 - 12460000
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||||| ||||||||||||| |||| | | ||||| ||| |||  |||||| ||| |||| |||||||| || || |||| |  ||||    
T  12460127 gtataagctatttctataacaaaagataaaat-aagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaat 12460029  T
Q  262 aagtcgaaaataccacatgaacatgtcat 290  Q
    ||| | |||| | || |||||||||||||    
T  12460028 aagccaaaaacaacatatgaacatgtcat 12460000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 25705729 - 25705677
Alignment:
Q  219 tataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    |||||||||||||||||||||||||  |||| |||||  |||||||| |||||    
T  25705729 tataagctgttttcataagctatccaaaaggtcttgtgaaaataagttgaaaa 25705677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 39105407 - 39105487
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||||| ||| || |||| |||| ||| ||||| |   |||| ||||| ||||||||||||||||||    
T  39105407 gtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatc 39105487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 25099990 - 25100114
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||| ||||| ||||||| || ||||| ||||||| ||||| ||   |||||||||| ||||||||||||||||| | ||| |||| |||||||||||    
T  25099990 aagctatttctaaagcaaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataagt 25100089  T
Q  266 cgaaaataccacatgaacatgtcat 290  Q
     ||||||| || |||||||||||||    
T  25100090 tgaaaatagcaaatgaacatgtcat 25100114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 29274356 - 29274281
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| ||  |||| ||||| |||||||||||||    
T  29274356 gtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 33500608 - 33500499
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||||| ||||||||||| |||| |||||||||||| |  ||||||||||||||||| |  |||||||| || ||  ||| | |||||    
T  33500608 gtataagctatttctataacaaaagataaagtaaaatcaaactgtttcaatataagttataagctgtttccgcaagctatcatgtagaacttatggaaat 33500509  T
Q  262 aagtcgaaaa 271  Q
    ||||||||||    
T  33500508 aagtcgaaaa 33500499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 4420560 - 4420607
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttc 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  4420560 gtataagctacttctataacaaaagataaaataaagtcaaactgtttc 4420607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 281974 - 281893
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||||| | ||||| |||||||||||||||||||||  ||||| ||  |||| |||||||||| |||||||||||||||    
T  281974 tataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcct 281893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 9093681 - 9093606
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||||| ||||||| |||||||||||||||||| ||| ||||| |   |||| |||||||||||||||||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10154175 - 10154242
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||||||| ||||||||||||||||||||||||||| ||  |||||||||||||  ||||||| ||||    
T  10154175 ttctatagaaaaagataaaataaagtcaaactgttttcatataagttataagctactttcataggcta 10154242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 1402942 - 1403019
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||| ||  |||| |||||  |||||||||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatc 1403019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 3155138 - 3155202
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||||| ||||||||||||||||||  |||  |||||||| |||||||||| |||||||    
T  3155138 caaaagataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctg 3155202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 33068688 - 33068604
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagct-gttttcataagctatcctg 245  Q
    ||||||| || ||||||| |||||||||||||||  ||||||||||| ||| |||| ||||||||  |||||||||||| |||||    
T  33068688 gtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataagatataagctatttttcataagctgtcctg 33068604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 33787872 - 33787792
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| ||||||| ||||| |||||| ||||||||| || || ||  |||||||||||||||||||||||| ||||    
T  33787872 gtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatc 33787792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 2027530 - 2027455
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    ||||||| || |||| |||||||||||||||||||||||| ||| ||  |||  ||||||||||| ||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagcta 2027455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 4006659 - 4006738
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||| || ||||||| |||| ||||||||||||||||| |||||  |  |||| |||||| ||||||||||||||||||    
T  4006659 ataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatcc 4006738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 10016488 - 10016567
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||||| | |||||||||||||||| | ||||||||  ||  ||||  ||||||||||||||||||||||    
T  10016488 gtataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagccataagctgttttcataagctat 10016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 32975921 - 32976004
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||| || |||| || ||||| ||||||||||||||||||||||| |   |||  ||||| ||||||||||||||||||||    
T  32975921 gtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatcctg 32976004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 22742310 - 22742392
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||| || |||| |||| ||||||||||||||||| ||||| ||  |||| |||||||| |||| ||||| |||||||    
T  22742310 tataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataagttatcctg 22742392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 323754 - 323823
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgtttt 231  Q
    |||||||||| |||||||  ||||||||||||||| ||||||||||| ||  |||||||| |||| ||||    
T  323754 gtataagctatttctatattaaaagataaaataaattcaaactgttttcatataagttatgagctatttt 323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 33911408 - 33911324
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaa 247  Q
    |||||| ||| || |||| |||||||| ||||||||| |||||| | |||  ||| ||||||||||||||||||| ||||||||||    
T  33911408 gtataatctatttttataacaaaagatcaaataaagttaaactgat-ccatataatttataagctgttttcataaactatcctgaa 33911324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 4247185 - 4247113
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    ||||||| ||||||| |||||||||||||| |||    |||||| ||  ||||||||||||||||||||||||    
T  4247185 taagctatttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttcataag 4247113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 7354147 - 7354227
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| ||||||| |||||||||||||||| || |||| ||| ||  |||| || ||||||||||||||| |||||    
T  7354147 gtataaactatttctataacaaaagataaaataaaatcgaactattttcatataagatacaagctgttttcataaactatc 7354227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 24782004 - 24782084
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||| ||||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||  ||| |||| |||||||    
T  24782004 ataagctatttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatcct 24782084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 25426136 - 25426216
Alignment:
Q  185 agataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||||||||||||||| || || || ||||| |||||||| |||| ||||||||||||| ||   || |||||||||||    
T  25426136 agataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatcctggagaatttatagaaataagt 25426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 30865425 - 30865469
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgt 206  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  30865425 gtatgagctatttctataacaaaagataaaataaagtcaaactgt 30865469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 3785811 - 3785748
Alignment:
Q  178 tagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||||||||||| ||||||||| |   |||| |||||||||||||  ||||||||    
T  3785811 tagcaaaagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctat 3785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 26491628 - 26491719
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||||||||||||||||||||||  |||||| ||  | || ||||  || || |||||||||| ||||||| |||| | ||||||||    
T  26491628 ttctatagcaaaagataaaataaagtcatcctgttttcatatgagatatatactattatcataagctaacctgaagagcttatggaaataag 26491719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 326399 - 326473
Alignment:
Q  166 aagctacttctatagcaaaagataaaat-aaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||| ||||||| ||||||||||||  ||||||||||||||| ||  |||| ||||| || ||||||||||||    
T  326399 aagctatttctataacaaaagataaaaggaaagtcaaactgtttacatttaagctataatcttttttcataagct 326473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 2514645 - 2514687
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  2514645 gtataagctatttctataataaaagataaaataaagtcaaact 2514687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 2727983 - 2727901
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||||| |||||||| |||||||||||  ||| ||||| ||| |  |  |||| |||||| |||||||||||||||||||    
T  2727983 gtataagctgcttctataacaaaagataaacaaaaatcaaattgtattgatataagctataagttgttttcataagctatcct 2727901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 3204667 - 3204593
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    |||| |||||||||||  |||||||||||||||||| |||||||| ||  |||| || ||  |||||||||||||    
T  3204667 ataaactacttctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttcataagc 3204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 8010299 - 8010428
Alignment:
Q  161 ggtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagt-aagttataagctgttttcataagctatcctgaagggcttgtagaa 259  Q
    ||||||||||| ||||||| ||| | ||||||||||||||| ||  || ||  | ||||||||||||||||| ||||| ||||||| ||  ||| |||||    
T  8010299 ggtataagctatttctataacaaca-ataaaataaagtcaatctactttcattttaagttataagctgttttaataagttatcctggagaacttatagaa 8010397  T
Q  260 ataagtcgaaaataccacatgaacatgtcat 290  Q
    ||||   ||||||| |  |||||||||||||    
T  8010398 ataaactgaaaatagcttatgaacatgtcat 8010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 20671992 - 20671946
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||| | |||||||||||||||||||||| |||||    
T  20671992 gtataagctatttctagatcaaaagataaaataaagtcaaattgttt 20671946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 24836326 - 24836280
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||| || ||||||| |||||||||||||||||||||| |||||    
T  24836326 gtataagttatttctataacaaaagataaaataaagtcaaattgttt 24836280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 1497943 - 1498004
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||||||||||||||||||||| ||  | |||||||||  |||||||||| |||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatc 1498004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 24774702 - 24774747
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  24774702 tataaactatttctataacaaaatataaaataaagtcaaactgttt 24774747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 27857319 - 27857364
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||| ||||| | || ||||||||||||||||||||||||||||    
T  27857319 tataagttacttttgtaacaaaagataaaataaagtcaaactgttt 27857364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 30784501 - 30784542
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    ||||||||  ||||||| ||||||||||||||||||||||||    
T  30784501 tataagctttttctataacaaaagataaaataaagtcaaact 30784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 33067102 - 33067202
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| | |||||  |||||  ||||||||||| || ||||| ||  || | |||||| ||||||||||||||||| || || ||||||||||||    
T  33067102 gtataagctattactataagaaaagcgaaaataaagtcgaattgttttcattta-gctataagttgttttcataagctatcttggagagcttgtagaaat 33067200  T
Q  262 aa 263  Q
    ||    
T  33067201 aa 33067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 14492259 - 14492327
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||| ||||||||||||| |||||||| |||||  |   ||| ||||||||||||||||||| ||||||    
T  14492259 tataccaaaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagttatcct 14492327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 31807972 - 31807890
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataag--ctgttttcataagctatcctg 245  Q
    |||||||  ||||| | ||||| |||||||||||||||| ||||||  | ||| |||||||  |||||||||||||||||||||    
T  31807972 ataagctctttctagaacaaaaaataaaataaagtcaaaatgtttcata-taaattataagagctgttttcataagctatcctg 31807890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 33817879 - 33817823
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaa-gttataagctgttttcataag 237  Q
    ||||||||||||||||| || |||||| || |||| |||||||| ||||||||||||    
T  33817879 aaaagataaaataaagtaaacctgttttcatgtaaagttataagttgttttcataag 33817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 30257646 - 30257754
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaataccacatga 281  Q
    ||||||||||||||||||||||||||||||  |||| | |||| ||||||||||| |||||||| ||||||| ||||||||||  ||||| | |  ||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatga 30257745  T
Q  282 acatgtcat 290  Q
    |||||||||    
T  30257746 acatgtcat 30257754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 44940300 - 44940386
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    |||||||||||||||||||||||||  |||||| ||| ||||||||||| ||||||||||| ||||||||||| | |||| ||||||||    
T  44940300 tatagcaaaagataaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatcctgaagaggttgtggaaataag 44940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 37842482 - 37842396
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||| | | | |||| |||||| ||||||||||||||||| |||||    
T  37842482 gtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaag 37842396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 49517013 - 49517091
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    ||||||| || ||||||| |||||||||||||||||||||| ||||| ||  |||| ||||||||||||||||||||||    
T  49517013 gtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 5150900 - 5150989
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    |||| |||||||||||||||||| ||| ||  |||||| |||  ||||||||||||||||| ||||| |||| ||||||||||| |||||    
T  5150900 aaaatataaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatcatgaagagcttatagaaataagttgaaaa 5150989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 33527272 - 33527192
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||| ||||| | |||||||||||||| ||||||||||||| ||  |||  ||||||||||||||||||| ||||||    
T  33527272 ataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcct 33527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 40304182 - 40304107
Alignment:
Q  161 ggtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||||||| || |||| |||||||||||||||| ||| | ||||| ||  |||||||||||||||||||||||    
T  40304182 ggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 4363745 - 4363651
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaa 270  Q
    |||| |||||||| |||||| |||||||||||| ||  |||| ||||| || ||||||||||||||||||||| | |||| ||| |||| |||||    
T  4363745 tataacaaaagattaaataatgtcaaactgttttcatataagctataacctattttcataagctatcctgaagagtttgttgaagtaagccgaaa 4363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 48830203 - 48830101
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    ||||||| || ||||||  | |||||||||||||||||||||| ||| ||  |||| ||||| ||||||||||||||||| || ||| |||  |||||||    
T  48830203 gtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagctaatagaaat 48830104  T
Q  262 aag 264  Q
    |||    
T  48830103 aag 48830101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 16322793 - 16322894
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaata 262  Q
    ||||| ||| || |||| |||||||||||||| ||||||||| ||| ||   ||||||||||||||||||||| |||||  ||||| |||| | ||||||    
T  16322793 tataaactatttttatatcaaaagataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaata 16322892  T
Q  263 ag 264  Q
    ||    
T  16322893 ag 16322894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 34179987 - 34179914
Alignment:
Q  174 tctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaa 247  Q
    |||||| |||||||||||||||||||||| |||||  |  |||| ||||| |||||||||||| ||||||||||    
T  34179987 tctataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaa 34179914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 4276763 - 4276683
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| ||||||| |||||||||| ||||||||| ||||||| ||  |||| ||||| ||||| ||||||||||||    
T  4276763 gtataaactatttctataacaaaagataatataaagtcatactgttttcacataagctataacctgttctcataagctatc 4276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 4548684 - 4548744
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||||||||  |   |||| |||||||||||||||||||||||    
T  4548684 aaaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataagctatc 4548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 9656604 - 9656676
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||||||| |||||||||||| ||| | ||| ||  |||| |||||||||| ||||||||||||||||    
T  9656604 ttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 9656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 12477394 - 12477334
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||||||||||||||| || ||||| |||| ||| |||| ||||||||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatc 12477334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 45205031 - 45205091
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||||||||||| ||||||  |||| || ||| |||||||||||||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatc 45205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 43029528 - 43029450
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||| ||| ||||| | |||||||||||||||| ||||||||||||| | |||||||| || | ||||||||||||||    
T  43029528 gtataacctatttctacaacaaaagataaaataaattcaaactgtttccta-taagttatgaggtattttcataagctat 43029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 15566749 - 15566683
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||| ||||||||||||||||||||||||  |   |||||||||| || |||||||||||||||    
T  15566749 tatagcataagataaaataaagtcaaactgttctcctttaagttataatctattttcataagctatc 15566683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 17631223 - 17631149
Alignment:
Q  167 agctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| || ||||  | | ||||||| |||||||||||    
T  17631223 agctatttctataacaaaagataaaataaagtctaactgttttcatgtaaactttgagctgttctcataagctat 17631149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 25944377 - 25944458
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||| |||||||  |||| |||| ||||| ||||||  |||| | ||||||||||||| |||||||||||||||||||    
T  25944377 tataagctagttctataataaaaaataagataaaatcaaaccatttc-atgtaagttataagcggttttcataagctatcctg 25944458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 271
Target Start/End: Complemental strand, 30259610 - 30259504
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcat-aagctatcctgaagggcttgtagaaataag 264  Q
    |||||| ||||||| ||||| ||||||||||||||||||| ||  |  |||| |||||||||||| ||| |||||||| || || |||| | ||||||||    
T  30259610 aagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataag 30259511  T
Q  265 tcgaaaa 271  Q
    | |||||    
T  30259510 ttgaaaa 30259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 35080196 - 35080094
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagc-tgttttcataagctatcctgaagggcttgtagaaat 261  Q
    ||||||| | ||||||| ||||| |||||||||||||||||||||||||  ||||   ||||| | ||||||| ||||||| || || |||||| |||||    
T  35080196 tataagcaatttctataacaaaaaataaaataaagtcaaactgtttccatataagcgctaagctttttttcatgagctatcatggagagcttgtcgaaat 35080097  T
Q  262 aag 264  Q
    |||    
T  35080096 aag 35080094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 6265038 - 6265083
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  6265038 tataagctacttctataacaaaaaataaaataaagtcaaattgttt 6265083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 23544767 - 23544686
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagtta-taagctgttttcataagctatc 242  Q
    |||||||||| |||||| | |||||||||||| |||||||| ||||| ||  |||| || ||| ||||||||||||||||||    
T  23544767 gtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatc 23544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 23895279 - 23895324
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtt 207  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  23895279 gtataagctatttctataacaaaagataaaataaattcaaactgtt 23895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 1393145 - 1393069
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    ||||||||| || |||| |||||| ||||||||||| || |||||| || ||||||||||||   ||||||||||||    
T  1393145 tataagctatttatataacaaaagttaaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 1393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 1730835 - 1730910
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    |||||||||| || | || | |||||||||||||||||||||| ||| || |||||||||||| | |||||||||||    
T  1730835 gtataagctatttttttaaccaaagataaaataaagtcaaactattt-catgtaagttataagttattttcataagc 1730910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 10581185 - 10581125
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||| ||||||||||||||||||| ||| ||  |||| |||||| ||||||||||||||||    
T  10581185 caaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 17269193 - 17269321
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    ||||||| || ||||| | ||||||  |||||||||||||| ||||| ||  ||||  ||||| |||||||||||||||||||| || ||||   | |||    
T  17269193 gtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagcttacggtaat 17269292  T
Q  262 aagtcgaaaataccacatgaacatgtcat 290  Q
    ||||  |||| | | ||||||||||||||    
T  17269293 aagttaaaaacaactcatgaacatgtcat 17269321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 27738288 - 27738228
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||||||||||||||| ||||| ||  |||| |||||  ||||||||||||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 34952158 - 34952238
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||| |||| ||| ||||||||||| ||| ||||| | | |||| | |||| |||||||||||||||||    
T  34952158 gtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatc 34952238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 37272694 - 37272630
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||| |||||||||||||| |||||| ||  |||| ||||||||||||||||||  |||||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctg 37272630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 45999415 - 45999335
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| || ||  |||| ||||| |  ||||| |||||||||    
T  45999415 gtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctatc 45999335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 46980242 - 46980182
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    |||| ||||||||||||||||| |||||||||| ||  ||||||||||  |||||||||||    
T  46980242 tatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 1255554 - 1255479
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||| |||||||| ||||||| |||| |||||||| | ||| ||   |||||||||||||||||||| ||||||    
T  1255554 aagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 1255479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 7218181 - 7218118
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||| ||||||||||||||| ||||| ||  |||| |||||| ||||||||||| ||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctg 7218118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 289
Target Start/End: Complemental strand, 7262645 - 7262518
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||| ||| ||||||  |||||  || |||||||| ||||||||| ||  | |  |||||| | ||||||||||||||||||||| |||||| |||||    
T  7262645 gtataaactatttctatgacaaaatgtataataaagttaaactgttttcattttaagtataagttcttttcataagctatcctgaagagcttgtggaaat 7262546  T
Q  262 aagtcgaaaataccacatgaacatgtca 289  Q
    |||  ||||| | |  ||||||||||||    
T  7262545 aaggtgaaaacagcttatgaacatgtca 7262518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 15360848 - 15360883
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15360848 ttctataacaaaagataaaataaagtcaaactgttt 15360883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 45769859 - 45769785
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||| |||||||||||||||| |||  || |||| |  ||||||||||||| |||| ||||||||||||||||    
T  45769859 ttctataacaaaagataaaataaactcat-ctatttcaagataagttataagctattttgataagctatcctgaag 45769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 50319235 - 50319274
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaa 201  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  50319235 gtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 8130409 - 8130459
Alignment:
Q  192 ataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||||| ||  |||| |||||| |||||||||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 15437910 - 15437988
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||| ||| | ||  | ||| |||||||||| ||||||||    
T  15437910 aagctatttctataacaaaaaataaaattaagtcaaactgttttcaaatcagccagaagttgttttcataggctatcct 15437988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 23373417 - 23373371
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||| ||||| ||||||| ||||||||||||||||||||| ||||||    
T  23373417 gtattagctatttctatatcaaaagataaaataaagtcaatctgttt 23373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 25006135 - 25006081
Alignment:
Q  188 taaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||| ||||| ||  |||| |||||| |||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 25006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 36151632 - 36151586
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||| ||| |||||||||||||||||||||| |||||    
T  36151632 gtataagctatttcaataacaaaagataaaataaagtcaaattgttt 36151586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 44032115 - 44031997
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaat 272  Q
    ||||||| |||||| ||||||||||||||| ||||| ||  |||| ||||| || ||||| |||| |||| ||||| |||| | ||||| ||  ||||||    
T  44032115 ttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaat 44032016  T
Q  273 accacatgaacatgtcatt 291  Q
    | |  ||| ||||||||||    
T  44032015 agcttatggacatgtcatt 44031997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 3924571 - 3924676
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||| ||||||| || |||||||||| ||| |||||||||| |   |||  ||| || |||||| |||||||||||||||| | || | ||||||||     
T  3924571 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagc 3924670  T
Q  266 cgaaaa 271  Q
    ||||||    
T  3924671 cgaaaa 3924676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 6933088 - 6932987
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||| | || |||| ||||| |||||||||||||||| ||||| ||   ||||||| || | |||||||||| | |||||||| |||| | |||||    
T  6933088 gtataagccatttttataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagttgtcctgaagagcttatggaaat 6932989  T
Q  262 aa 263  Q
    ||    
T  6932988 aa 6932987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 7274052 - 7273975
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||| |||||||| ||||||||||||| ||||| ||   |||||||||||||||| ||||| ||| | ||||| ||||    
T  7274052 tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaagagctt 7273975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 17423066 - 17422985
Alignment:
Q  162 gtataagctacttctatagcaaaa-gataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||  ||||||| ||||| |||||||||||||||| ||| || ||  |||| |||||| |||||||||| ||||||    
T  17423066 gtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcatatgctatc 17422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 30371105 - 30371166
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||| |||||||||||||||| ||||| ||||| ||  |||| |||||| ||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 38867959 - 38867914
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||||||| |||||||| ||||||||||||| |||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttt 38867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 46499980 - 46499935
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| |||||||  ||||||||||||||||||||| |||||    
T  46499980 tataagctatttctataagaaaagataaaataaagtcaaattgttt 46499935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 49557084 - 49557172
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttc--ataagctatcctgaag 248  Q
    ||||||| || ||||||| |||||||||||||||||| |||  || | ||  |||| |||||| |||||||  ||||||||||||||||    
T  49557084 gtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcatataagctatcctgaag 49557172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 51695610 - 51695542
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| ||||||||||||||||| ||| ||||| |   |||||||| || |||||||||||||||||    
T  51695610 ttctatagtaaaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatc 51695542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 289183 - 289223
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| || | |||||||||||||||||||||||||    
T  289183 gtataagctatttttgtagcaaaagataaaataaagtcaaa 289223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 3887759 - 3887723
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3887759 gtataagctatttcaatagcaaaagataaaataaagt 3887723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 7028235 - 7028271
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  7028235 gtataaactatttctatagcaaaagataaaataaagt 7028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 9572235 - 9572199
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  9572235 gtattagctatttctatagcaaaagataaaataaagt 9572199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 15579426 - 15579505
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||| | |||| | ||||||| ||||| ||||| || ||||| ||||||||||| || |||||||||    
T  15579426 gtataagctatttctataactaaagttcaaataaa-tcaaattgttttcatgtaagctataagctgttctcgtaagctatc 15579505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 28467420 - 28467356
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||| |||||||||||||||||||||| | ||| ||  |||| || ||| |||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 34380390 - 34380434
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||    
T  34380390 ataagctatttctaaaacaaaagatacaataaagtcaaactgttt 34380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 43420201 - 43420281
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||| ||| | |||||||||||||||||||||| |||  |  ||||||  ||| | |||||||||||||||    
T  43420201 gtataagctatttccataacgaaagataaaataaagtcaaactttttttatataagttgcaagttattttcataagctatc 43420281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 48064263 - 48064327
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||||||||||||||||||||| ||||| |||     ||||||||||| || |||||||||    
T  48064263 ttctatagcaaaagataaaataaagtaaaactatttttgtataagttataagttgatttcataag 48064327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 160086 - 159998
Alignment:
Q  175 ctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    |||||||||||||||||||||||||||||||  ||  | ||||||||||| ||||||||||||||||||| ||| |||||| ||||||||    
T  160086 ctatagcaaaagataaaataaagtcaaactgaatcata-taagttataagatgttttcataagctatcctaaagagcttgtggaaataag 159998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 44011530 - 44011421
Alignment:
Q  20 caaagggacttaatccaccatcatcaaacatgttatacttcagtggtccacatttggctcttgctatcaaaactggacttgtcactggaatcttgtctct 119  Q
    |||||||| ||||||||||||||  |||| |||||||||||| ||||||  | |||||||||||||||||||| ||  ||||||| |||||| | |||||    
T  44011530 caaagggagttaatccaccatcagtaaacctgttatacttcaatggtccttacttggctcttgctatcaaaacaggcattgtcacaggaatcctatctct 44011431  T
Q  120 cactgtaagc 129  Q
    ||| ||||||    
T  44011430 cacagtaagc 44011421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 15377709 - 15377792
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctga 246  Q
    ||||||||||||||||| |||| ||||||||||||| | | ||||| ||  |||||||||||||||||||||||||||| ||||    
T  15377709 tataagctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataagctattctga 15377792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 17952827 - 17952745
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||| ||  |||| || ||| ||||||||||||||||||||    
T  17952827 tataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctg 17952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 29300608 - 29300716
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaataccacatga 281  Q
    ||||||||||||||||   || ||||| || |||||||||||| ||||||||||||||||||| ||  |||| | ||||||||| ||||||| |  ||||    
T  29300608 aaaagataaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatccttaaatgcttatggaaataagtagaaaatagctaatga 29300707  T
Q  282 acatgtcat 290  Q
    |||||||||    
T  29300708 acatgtcat 29300716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 33256690 - 33256769
Alignment:
Q  169 ctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||  |||  ||||||| |||||||||||| |||||||||    
T  33256690 ctacttctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaag 33256769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 34055028 - 34054946
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||| |||| ||||||| ||||||||||||||||| |||||||||| ||  || | |||||| |||||||||||||||||||    
T  34055028 gtataggctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcct 34054946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 43141834 - 43141900
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||||||| |||||||||| ||||||||  |||| |||||| |||||||||||||||||||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaag 43141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 13866832 - 13866917
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaa 247  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||  |  |||  |||||||| ||||||| ||||||||||||    
T  13866832 gtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctatcctgaa 13866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 33942112 - 33942169
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    |||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 42817492 - 42817412
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||||| ||||||||||||| ||||||| |||||| ||  ||||| |||| ||||||||||||||||| |||||| ||||    
T  42817492 ttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagctt 42817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 39567846 - 39567921
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    ||||||| || ||||||| |||||||||||||||||| ||| |||||| |  |||| |||||||||||||||||||    
T  39567846 gtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataag 39567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 29935946 - 29936028
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||| ||| ||||||| ||| | ||||||||| |||||| |||||||| ||||| |||||| | |||||||||||||||||    
T  29935946 gtataaactatttctataacaacaaataaaataacgtcaaattgtttccatgtaagctataagtttttttcataagctatcct 29936028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 3673761 - 3673850
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaata 262  Q
    ||||||| ||||| |||||||||||| ||| ||||| ||  ||||||||||| | ||||||| ||||||| ||||| ||||| |||||||    
T  3673761 ttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagcttgcagaaata 3673850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 271
Target Start/End: Complemental strand, 9878805 - 9878700
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||  |  || | |||||| |||||||||  ||||||| | || ||||| ||||||||||    
T  9878805 aagctatttctataacaaaagataaaataaactcaaactatttttacatatgctataagttgttttcattcgctatcccggagagcttgaagaaataagt 9878706  T
Q  266 cgaaaa 271  Q
    ||||||    
T  9878705 cgaaaa 9878700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 11513860 - 11513921
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||| ||||| ||  |||| |||||| |||||||||||||||||    
T  11513860 caaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 14666510 - 14666571
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||||||||||||||| || ||  ||||||||||| |||||||| ||||||||    
T  14666510 caaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 28933767 - 28933876
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| || |||| ||||||||||||| || ||||| | ||| ||  ||||||||||  |||||||||||||||||||  || |||  |||||||    
T  28933767 gtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctagagagctgatagaaat 28933866  T
Q  262 aagtcgaaaa 271  Q
    |||| |||||    
T  28933867 aagttgaaaa 28933876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 5133715 - 5133795
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||||  |  |||| ||||||||||||||| ||| ||||    
T  5133715 gtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatc 5133795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 10143115 - 10143195
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||  |  |||| |||||| | |||||||||||||||    
T  10143115 gtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatc 10143195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 18962165 - 18962085
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||| ||||| || |||| |||||||||||||||||| ||||||||| ||  |||| ||||| || |||||||||||||||    
T  18962165 gtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatc 18962085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 5043666 - 5043607
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||||||| ||  |||| || ||| |||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 6988069 - 6988160
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||| |||||||||||||||||||||| | ||| |     ||||||||| ||||||||||||||||| ||||| | || ||||||||||    
T  6988069 ttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataag 6988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 10563685 - 10563594
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||||||||| ||||||| |||||||||  ||| ||| ||| |||||    |||||||||||| |||||||||||||||| |||||| ||||    
T  10563685 gtataagctatttctataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataagctatgctgaagagctt 10563594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 1742157 - 1742031
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataa 263  Q
    |||| ||| ||||||| ||||| ||||||| |||||||||| |||  |  |||| |||||||||||||||||| ||||| ||||| | || | |||||||    
T  1742157 ataaactatttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaataa 1742058  T
Q  264 gtcgaaaataccacatgaacatgtcat 290  Q
    || ||| ||| |  ||| |||||||||    
T  1742057 gttgaagatagcttatgcacatgtcat 1742031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 32694155 - 32694237
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||| ||||||| |||||||||||||||| ||| ||| |||  |  ||| ||||||| ||||| |||||||||||||    
T  32694155 gtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttgtttgcataagctatcct 32694237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 37053548 - 37053622
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaa 247  Q
    ||||||| || || |||||||||||||||||||||| ||  ||||||||||| | ||||||| ||||||| ||||    
T  37053548 ttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcattagctatcatgaa 37053622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 40145424 - 40145482
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||||||||||||||||||  |||||  | |||||||||||| ||||||||||||||    
T  40145424 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct 40145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 1939458 - 1939350
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttcca-agtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||| || ||||||| |||||||||||||||||| ||||| ||| || | | || ||||| ||||||||||||||||| ||| || |||| | |||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaat 1939360  T
Q  262 aagtcgaaaa 271  Q
    |||| |||||    
T  1939359 aagttgaaaa 1939350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 32098434 - 32098389
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  32098434 tataagctatttctataacaaaagataaaataaagtcaaagtgttt 32098389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 35485881 - 35485946
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||||||||||||||||||| ||||    |||| |||||| |||||| ||||||||||||||||    
T  35485881 aaagataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaag 35485946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 15281441 - 15281521
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||||| |||||||||||||||| || |||||||| || ||| |||||||| |  ||| ||||||||| |||||| ||||    
T  15281441 ttctatatcaaaagataaaataaattccaactgtttgcatgtaggttataagtttcttttataagctattctgaagagctt 15281521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 18066075 - 18066151
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||||| || |||| || ||||||||| ||| ||||| ||  |||| ||||||||||||||||||||||||    
T  18066075 aagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatc 18066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 26143768 - 26143732
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagt 198  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26143768 gtataagctatttctatagcaaaagataaaataaagt 26143732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 35099716 - 35099644
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaa-ctgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||| |||||||||||||||| ||||| || ||| ||   ||||||||||||| ||||||||||||||||    
T  35099716 ttctataacaaaagataaaataaaatcaaaactattttcattaaagttataagctgctttcataagctatcct 35099644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 40943853 - 40943893
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaac 203  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  40943853 tataagctacttctataacaaaaaataaaataaagtcaaac 40943893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 7103588 - 7103529
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctg-ttttcataagctatc 242  Q
    |||||||||||||||||||||||||  |  |||| ||||||||| |||||||||||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatc 7103529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 22681293 - 22681230
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||||| |||| |||| ||||| ||  |||| |||||||||||||||||| |||||||    
T  22681293 caaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 22681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 31461382 - 31461421
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  31461382 tataagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 35755629 - 35755554
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||||| |||||||   ||| | |||||||||||||| ||||| || ||||| |||||| ||||||||||||    
T  35755629 gtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 44438963 - 44438920
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||| |||  |||||||||||||||||||||||||||||||    
T  44438963 taagctatttccgtagcaaaagataaaataaagtcaaactgttt 44438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 3102636 - 3102678
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| || |||||||||| ||||||||||||||||||    
T  3102636 gtataagctatttttatagcaaaatataaaataaagtcaaact 3102678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 5045284 - 5045238
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| || |||| ||||||||||||||||||||| ||||||    
T  5045284 gtataagctatttttataacaaaagataaaataaagtcaagctgttt 5045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 12215750 - 12215832
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||| ||| ||||| | ||||||||||||||||||| | | |||||||  || | ||||||||||||| |||||| |||||    
T  12215750 gtataaactatttctacaacaaaagataaaataaagtcgacccgtttccatatatgctataagctgtttttataagccatcct 12215832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 28803632 - 28803550
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||| || ||| ||| ||||||||||||||||||||||||| || ||  |||| || ||| ||||||| ||| ||||||||    
T  28803632 tataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctg 28803550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 29430699 - 29430772
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||| |   |||| ||||||||||| ||||||    
T  29430699 gtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgttctcataa 29430772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 33192147 - 33192197
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataa 223  Q
    ||||||| || ||||||||||||||||||||||||| ||  ||||||||||    
T  33192147 ttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 35459853 - 35459899
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| || |||| |||||||||||||||||||||| |||||    
T  35459853 gtataagctatttgtataccaaaagataaaataaagtcaaattgttt 35459899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 35539686 - 35539740
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    ||||||||||||||| ||||||| ||| ||  ||||||||||||| |||||||||    
T  35539686 aaaagataaaataaaatcaaactattttcatataagttataagctattttcataa 35539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 37276722 - 37276772
Alignment:
Q  195 aagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||||||| ||  ||||||||||| |||||||||||| |||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctg 37276772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 40837555 - 40837509
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| ||||||||||| |||||||||| |||||    
T  40837555 gtataagctatttctataacaaaagataaattaaagtcaaattgttt 40837509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 43530236 - 43530190
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttcc 210  Q
    |||||||| |||||||| | |||||||||||||||||||||| ||||    
T  43530236 ataagctatttctataggacaagataaaataaagtcaaactgcttcc 43530190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 1869831 - 1869910
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||||| || ||||||| ||||||||||  |||| ||||||||||| ||  || ||||||||||||||||| |||||||||    
T  1869831 gtataagatatttctataacaaaagataat-taaaatcaaactgttttcatcta-gttataagctgttttcacaagctatcc 1869910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 29503188 - 29503131
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||||||||||| ||| |||  |||||||||| ||||| ||||| ||||    
T  29503188 aagataaaataaagtcaaactattttcaaagaagttataagatgtttccataaactat 29503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 36863741 - 36863672
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||| ||| ||||||||||||||||||||||  |||  |  ||||||||||  |||||||||||||||||    
T  36863741 ttctctagtaaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatc 36863672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 40758967 - 40759012
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||| ||| |||||||||||||||||||||| |||||    
T  40758967 tataagctatttccataacaaaagataaaataaagtcaaattgttt 40759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 42592293 - 42592358
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||||| ||||||||||||| |||| ||  ||||| ||  |||| ||||||||||||||||||||    
T  42592293 ttctataccaaaagataaaattaagttaacttgttttcatataagctataagctgttttcataagc 42592358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 32821809 - 32821853
Alignment:
Q  219 tataagctgttttcataagctatcctgaagggcttgtagaaataa 263  Q
    ||||| |||||||||||||||||||| ||| |||| |||||||||    
T  32821809 tataaactgttttcataagctatcctaaagagcttatagaaataa 32821853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 37292455 - 37292391
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||||||||||| ||||| ||| ||  |||| ||| || ||||||| ||||||||||||    
T  37292455 caaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctg 37292391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 38239678 - 38239638
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| ||||||| ||||||||||||| ||||||||    
T  38239678 gtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 41851281 - 41851245
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttc 209  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  41851281 ttctatagaaaaagataaaataaagtcaaattgtttc 41851245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 43205281 - 43205361
Alignment:
Q  191 aataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    ||||||| |||||||||| ||  |||| ||||| ||||||||||||||||||  | || |||| | ||||||||| |||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataagttgaaaa 43205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 38462225 - 38462305
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||  || | ||||| |||||||||||||||||||    
T  38462225 tataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 52618946 - 52619074
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||| | |||| ||| ||||||||| ||| ||||| ||  |||||||||||||||||||| |||||||| ||||| ||||||  ||||    
T  52618946 gtataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaat 52619045  T
Q  262 aagtcgaaaataccacatgaacatgtcat 290  Q
    |||  ||||||| |  |||||||||||||    
T  52619046 aaggtgaaaatagcttatgaacatgtcat 52619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 24887409 - 24887327
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||| | ||  |||| || ||||||||||||||||||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctg 24887327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 22232769 - 22232860
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||||||||| || |||| |||| ||||||||||||||||||||||| ||  |||||  |||||| ||||||||||||||| || |||||||    
T  22232769 gtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtagggctt 22232860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 28306102 - 28306203
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaata 262  Q
    |||||||||  |||||| |||||  ||||||||||||||||||||| ||  ||||||| ||| |||||||||||||||| | |||| ||||  |||||||    
T  28306102 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacagaaata 28306201  T
Q  263 ag 264  Q
    ||    
T  28306202 ag 28306203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 3182489 - 3182413
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||| ||   |||||||| ||||||||| |||||    
T  3182489 gtataagttacttctatagaaaaagataaaataaagtcaaattgttttcatacaagttataggctgttttcgtaagc 3182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 33405283 - 33405208
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    |||||||||||||| ||||||||||| ||  ||||| ||  |||| |||||||||||||||||||||||| |||||    
T  33405283 ttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaag 33405208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 39602334 - 39602257
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| |||||||| ||||||||| ||||||| ||| |||| |  | |||||||||||||||||||||||||||||    
T  39602334 ataagctatttctatagaaaaagataacataaagttaaattgttgcgta-taagttataagctgttttcataagctatc 39602257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 40122879 - 40122798
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||| | |  ||| |||||| |||||| ||||||||||||    
T  40122879 gtataagctatttcaataacaaaagataaaataaagtcaaactgttttc-ataaagctataagttgtttttataagctatcct 40122798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 36646508 - 36646427
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||||| ||||||  ||||||||||||||||||  || ||||| ||  ||||||||||  |||||||||||||||||||    
T  36646508 tataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcct 36646427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 49587042 - 49586997
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttt 49586997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 20502176 - 20502104
Alignment:
Q  182 aaaagataaaataaagtcaaa-ctgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||||| ||||||||||||| |||||| ||  || | |||||||||||||||||||||||||||||| ||||    
T  20502176 aaaagatcaaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatcctgaagagctt 20502104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 1217900 - 1217845
Alignment:
Q  189 aaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||| |||| ||| ||||| || ||||||||||||||||||||||||||||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatcct 1217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 2201092 - 2201151
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||||||||||| ||  |||| |||||||||||||||| |||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatc 2201151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 24235810 - 24235731
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||| || ||||||| |||||||||| ||||||||||||| |||  |  |||| |||||| ||||||||||||||||    
T  24235810 gtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 31337509 - 31337450
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    ||||||||||||||||||||||||||||  |  ||||||||||| ||| |||||||||||    
T  31337509 caaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 36783457 - 36783382
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||| ||||||| |||||||||||||||||| ||| ||||| ||  |||  ||| |||||||||||||||||||    
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 41452494 - 41452549
Alignment:
Q  190 aaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||||||||||||| ||  | |||| |||||||||||||||||||||||||    
T  41452494 aaataaagtcaaactgttttcatattagttgtaagctgttttcataagctatcctg 41452549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 1395614 - 1395688
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataa 236  Q
    |||||||||| ||||||| |||||||||||||||||||||| | ||| ||  |||| ||| | ||||||||||||    
T  1395614 gtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 34254936 - 34254890
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||    
T  34254936 gtataagctatttctgtagcaaatgataaaataaagtcaaactgttt 34254890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 48286913 - 48286835
Alignment:
Q  186 gataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    |||| |||||||| ||| ||||||||  |||||||||| ||||||||||||| |||| || || |||| ||||||||||    
T  48286913 gatagaataaagttaaattgtttccatataagttataaactgttttcataagttatcatgtagagcttatagaaataag 48286835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 53457320 - 53457362
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  53457320 gtataagctacttcgataacaaaagataaaataaagtcaaact 53457362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 20192733 - 20192664
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgtttt 231  Q
    |||||||||| || |||| ||||||||||||||||||||||| |||| ||  |||  |||||||||||||    
T  20192733 gtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 20467286 - 20467185
Alignment:
Q  189 aaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaataccacatgaacatgtc 288  Q
    |||||| | ||||||| ||| |||||||| ||||||||||||||||||| ||||||   | ||||||  |||| || |||||| | || |||||||||||    
T  20467286 aaaatatattcaaactatttacaagtaagctataagctgttttcataagatatcctagcgagcttgtcaaaattagccgaaaacagcatatgaacatgtc 20467187  T
Q  289 at 290  Q
    ||    
T  20467186 at 20467185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 24158629 - 24158527
Alignment:
Q  162 gtataagctacttctatagcaaaaga-taaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaa 260  Q
    ||||||| || ||||||| |||| || |||| |||||| |||||||||  |  ||||| |||||||||||||||||||||||||| || |||| | ||||    
T  24158629 gtataagttatttctataacaaatgaataaagtaaagtgaaactgtttata--taagtaataagctgttttcataagctatcctggagagcttatggaaa 24158532  T
Q  261 taagt 265  Q
    |||||    
T  24158531 taagt 24158527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 30956751 - 30956707
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgttt 30956707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 30972563 - 30972519
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgttt 30972519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 33965604 - 33965525
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagt--aagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||| |||||| ||||||||||||||||||||| ||  |  ||| |||||| ||||||||||||||||| ||||| ||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagctt 33965525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 905097 - 905058
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaa 201  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  905097 gtataagctatttctataacaaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 1816546 - 1816605
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||||||||||||||||||||     |||| |||||| ||||||||||||||||    
T  1816546 aaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctat 1816605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 22667371 - 22667414
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  22667371 taagctacttctataacaaaagataaaatgaagccaaactgttt 22667414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 22724010 - 22724053
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  22724010 taagctacttctataacaaaagataaaatgaagccaaactgttt 22724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 23785200 - 23785275
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    ||||| || ||||| |||| ||||||||||||||||||||||| | ||  |||| ||||| ||||||||| |||||    
T  23785200 ataagttatttctacagcagaagataaaataaagtcaaactgtattcatataagctataaactgttttcacaagct 23785275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 24605143 - 24605080
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagc 225  Q
    ||||||| || ||||||| |||||||| ||||||||||||||  ||| || |||||||||||||    
T  24605143 gtataagttatttctataacaaaagatgaaataaagtcaaaccatttgcatgtaagttataagc 24605080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 41028978 - 41028923
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaag 217  Q
    |||||||||| ||||||| ||||||| ||||||||||||| |||||| ||| ||||    
T  41028978 gtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataag 41028923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 51278284 - 51278225
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttat 221  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||||| ||  ||||||||    
T  51278284 gtataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaagttat 51278225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 52597631 - 52597710
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||| |||| |||||||||| | |||| | | ||||| ||  ||||||||||| ||||||||||||||||    
T  52597631 gtataagctatttccatagtaaaagataaagtgaagtaacattgttttcatataagttataagatgttttcataagctat 52597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 2128378 - 2128332
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  2128378 gtataagctatttctataacaaaagataaaataaagttaaattgttt 2128332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 10101601 - 10101527
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||| || ||||||| |||||||||||||||||| ||| ||||| ||  |||| || ||| |||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 10212526 - 10212452
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||| || ||||||| |||||||||||||||||| ||| ||||| ||  |||| || ||| |||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 264
Target Start/End: Original strand, 27792815 - 27792917
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||| | | ||||||||||||||| |||||||| ||| ||  |||| |  ||| ||||||||||| ||||| || || |||| |||||||    
T  27792815 gtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaat 27792914  T
Q  262 aag 264  Q
    |||    
T  27792915 aag 27792917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 44061150 - 44061104
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||||||||||||||||||| || ||| |||||    
T  44061150 gtataagctatttctatagcaaaagataaaataaggttaaattgttt 44061104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 44284185 - 44284139
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| ||||| |||||| |||||||||||||||    
T  44284185 gtataagctatttctataacaaaaaataaaacaaagtcaaactgttt 44284139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 237345 - 237422
Alignment:
Q  167 agctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||| ||||||| || ||||||||||||| | ||| | | | || |||||||||||| |||||||||||| ||||||    
T  237345 agctatttctataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcataagttatcct 237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 8007822 - 8007777
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtt 207  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||    
T  8007822 gtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 8007777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 20220403 - 20220460
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    ||||||||||| ||||| |||||||||| ||  ||| ||||||||||||| |||||||    
T  20220403 aaaagataaaacaaagtaaaactgtttctaaacaagctataagctgtttttataagct 20220460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 29600841 - 29600772
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||||| |||||||||| ||||  ||||| ||| |||| ||||| | |||||||||| |||||    
T  29600841 ttctatagcaaaacataaaataaaatcaatttgttttcaaataagctataaaccgttttcataacctatc 29600772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 37689178 - 37689211
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaag 197  Q
    |||||||| |||||||||||||||||||||||||    
T  37689178 ataagctatttctatagcaaaagataaaataaag 37689211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 46778353 - 46778308
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||||||||||| |||||||||||||| ||| |||||    
T  46778353 tataagctatttctatagcaagagataaaataaagttaaattgttt 46778308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 15304472 - 15304428
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| ||||||| |||||||||||||||||| ||| |||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttt 15304428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 21865521 - 21865598
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||||||| |||||||||||| || |||||  ||||| ||  |||| |||||| |||||| |||||||||    
T  21865521 gtataagctagttctataacaaaagataaaacaaggtcaa--tgttttcatataagctataagttgttttgataagctat 21865598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 22343589 - 22343637
Alignment:
Q  200 aaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||||| ||  ||||||||||||||||| |||||||||| ||||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaag 22343637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 23315591 - 23315671
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||||||||||||| ||||| ||  || | |||||| ||||| |||||||||| || ||| |||| | ||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataag 23315671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 25183115 - 25183035
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| || |||| |||||||| ||||||||| || || ||| ||  | || ||||||||||||||||||||||||    
T  25183115 gtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataagctgttttcataagctatc 25183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 33307568 - 33307500
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||| |||||||||||||| || | |||||| |||  |  ||||||||||| ||||||||||||||||    
T  33307568 ttctagagcaaaagataaaacaatgccaaactatttttatataagttataagatgttttcataagctat 33307500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 34318031 - 34318071
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  34318031 gtataagctatttctataacaaaatataaaataaagtcaaa 34318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 44284144 - 44284096
Alignment:
Q  225 ctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaata 273  Q
    ||||||||||||||||||||| || |||| ||||||||||  |||||||    
T  44284144 ctgttttcataagctatcctggagagcttatagaaataagctgaaaata 44284096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 8799359 - 8799431
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||| |||||||||||||||||||||||| ||||||  ||| ||||||| |||||| |||||||||||||    
T  8799359 ttctataacaaaagataaaataaagtcaaactatttccagataaattataaggtgtttttataagctatcctg 8799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 34080393 - 34080310
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||| ||   |||| ||||||||||||||||| |||||||||    
T  34080393 gtataagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctatcctg 34080310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 30013175 - 30013244
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||| |||||| | |||| |||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  30013175 tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 42597344 - 42597420
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||||| || | ||| |||||| |||||||||||||    
T  42597344 gtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 6864562 - 6864507
Alignment:
Q  186 gataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctat 6864507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 34770854 - 34770917
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||||||||||||||| ||||| ||  |||| |||||| |||||||||||||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcct 34770917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 8578573 - 8578627
Alignment:
Q  219 tataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaata 273  Q
    ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||    
T  8578573 tataagctgttttcataagctatcccggagagcttgtagaaataagccgaaaata 8578627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 1470983 - 1470898
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaa 247  Q
    |||||||||| |||||||  ||||||||||||||||||||| |  || ||  |||| |||||||||||||||||| ||||| ||||    
T  1470983 gtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaa 1470898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 6509408 - 6509319
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaata 273  Q
    ||||||||||||||||||| ||| |  |  |||| ||||||||||||||||||||||||||| || |||| | ||||||||  |||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaata 6509319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 9699944 - 9700017
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcata 235  Q
    |||||||||| ||| ||| |||||| |||||||| |||||| ||||| ||| ||| ||||||||||||||||||    
T  9699944 gtataagctatttcgataacaaaagttaaaataaggtcaaattgttttcaaataaattataagctgttttcata 9700017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 10727142 - 10727218
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||| |||||||||||||||| ||||||| ||||| ||||| ||  ||||||||||| |||||| |||||||||    
T  10727142 ataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataagttgtttt-ataagctat 10727218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 29973025 - 29973106
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||||| |||| || || ||| ||||||||||||||||| ||| ||  |||| |||||| |||||||||||||||||||    
T  29973025 tataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatcct 29973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 4763880 - 4763952
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||||||||||||||| |||||| |||| ||  |||| |||||||||||||  ||||||||||||||| ||||    
T  4763880 caaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagagctt 4763952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 29699208 - 29699268
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttca 233  Q
    ||||||| |||||||||||||||||||||| ||||  ||  ||||||||||||||||||||    
T  29699208 ttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 11795035 - 11795114
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||  ||||||  ||||| ||| |||||||||| ||||||| ||  |||||||||||||| |||||||||||||    
T  11795035 gtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctat 11795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 29056118 - 29056079
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaa 201  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  29056118 gtataagctacttctagagcaaaagataaaataaagtcaa 29056079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 2093242 - 2093324
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    |||||||||||||||||||||  |||| |   |||| |||||| ||||||||| ||||||||||||| | || ||||||||||    
T  2093242 aaaagataaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctgaagcgtttatagaaataag 2093324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 3537158 - 3537112
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||    
T  3537158 gtataagcaatttctatagcaaaagataaaataaagtcaaattgttt 3537112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 4558741 - 4558823
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||| |||||||  ||||||||||||||||| ||| | ||| ||  || | |||||||||||| |||||||||||||    
T  4558741 gtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcct 4558823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 7918900 - 7918798
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||| ||| ||||||| | ||| |||||||||||| ||| | ||| |  ||||| |||||| ||||||||||||||||| || || |||||| |||||    
T  7918900 gtataacctatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaat 7918801  T
Q  262 aag 264  Q
    |||    
T  7918800 aag 7918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 14949831 - 14949873
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  14949831 gtataagctacttctataacaaaagataaaatagagtcaaact 14949873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 27465316 - 27465362
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||    
T  27465316 gtataagctatttctatagcaaaagataaaatcaaatcaaactgttt 27465362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 29592638 - 29592576
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||||||||| ||| |||||||   |||| |||||||||||||| ||||||||||||    
T  29592638 aaagataaaataaagtaaaattgtttccttataagctataagctgttttcgtaagctatcctg 29592576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 13652158 - 13652267
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||||||||||||||  ||| |||| ||| ||||| ||  ||||||||||  |||||| ||||||||| ||| || ||||   |||||    
T  13652158 gtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaat 13652257  T
Q  262 aagtcgaaaa 271  Q
    |||| |||||    
T  13652258 aagtagaaaa 13652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 13710801 - 13710910
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||||||||||||||  ||| |||| ||| ||||| ||  ||||||||||  |||||| ||||||||| ||| || ||||   |||||    
T  13710801 gtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgtttttataagctattctggagagcttaaggaaat 13710900  T
Q  262 aagtcgaaaa 271  Q
    |||| |||||    
T  13710901 aagtagaaaa 13710910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 2605981 - 2606041
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||| |||||||||| |||| |  |||||  |||||||||||||||||||||    
T  2605981 caaaagataaaattaagtcaaactatttctatataagtcttaagctgttttcataagctat 2606041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 27728142 - 27728066
Alignment:
Q  168 gctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||| |||||||  ||||||||||||||||||||||| ||| ||  |||  ||| || |||||||||||||||||||    
T  27728142 gctatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagctatcct 27728066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 39392788 - 39392744
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgt 206  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||    
T  39392788 gtataaactatttctataacaaaagataaaataaagtcaaactgt 39392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 40728543 - 40728499
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  40728543 ataagttatttctataacaaaagataaaataaagtcaaactgttt 40728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 7514521 - 7514600
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| |||||||||||||  |||||||| ||  || ||||| ||  |||| || ||||||||||||||||||||    
T  7514521 gtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctat 7514600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 10437839 - 10437874
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10437839 ttctataacaaaagataaaataaagtcaaactgttt 10437874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 28769466 - 28769387
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| | ||||| ||||  ||||||| |||||||||| ||| |   |||| |||||||||||||||||||||||    
T  28769466 gtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 39551336 - 39551233
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||| ||||||| |||  ||||||||||||||||  ||||||| | ||   ||| |||||| |||||||||||||| ||||| || |||| || ||||    
T  39551336 gtataacctacttccataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaat 39551237  T
Q  262 aagt 265  Q
    ||||    
T  39551236 aagt 39551233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 9836979 - 9836901
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| || |||| |||  |||||| |||||||||||| ||| ||  ||||||| || ||||||||||||||||||    
T  9836979 ataagctatttttataacaactgataaagtaaagtcaaactattttcatataagttacaacctgttttcataagctatc 9836901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 12361156 - 12361210
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    ||||||||||| |||||||| ||||| ||  |||| |||||||||||||||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataag 12361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 14482145 - 14482191
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||| ||| ||||||| |||||||||||||||||||||| |||||    
T  14482145 gtataaactatttctataacaaaagataaaataaagtcaaattgttt 14482191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 18931366 - 18931316
Alignment:
Q  221 taagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    ||||||||||||||||||||||||  ||  ||||| |||||||||||||||    
T  18931366 taagctgttttcataagctatcctagagaacttgttgaaataagtcgaaaa 18931316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 26215439 - 26215481
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| |||||||||||||||||| |||||    
T  26215439 gtataagctatttctataacaaaagataaaataaagttaaact 26215481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 26820142 - 26820184
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    ||||||| || ||||||| ||||||||||||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaact 26820184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 28784902 - 28784820
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||||||||||||||| |||||  |  | |||| |||||| ||||||||||||||| |  || ||||||| |||||||    
T  28784902 aaaagataaaataaagtcaaattgttttgatatcagttgtaagctattttcataagctatcttagagagcttgtaaaaataag 28784820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 2100759 - 2100788
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaa 202  Q
    ||||||||||||||||||||||||||||||    
T  2100759 ttctatagcaaaagataaaataaagtcaaa 2100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 6918305 - 6918260
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| || ||||  |||||||||||||||||||||||||||    
T  6918305 tataagctatttatataataaaagataaaataaagtcaaactgttt 6918260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 10114433 - 10114466
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataa 195  Q
    |||||||||| |||||||||||||||||||||||    
T  10114433 gtataagctatttctatagcaaaagataaaataa 10114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 11000687 - 11000642
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| ||| ||| |||||||||||||||||||||| |||||    
T  11000687 tataagctatttccataacaaaagataaaataaagtcaaattgttt 11000642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 11119115 - 11119082
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgt 206  Q
    ||||||| ||||||||||||||||||||||||||    
T  11119115 ttctataacaaaagataaaataaagtcaaactgt 11119082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 11813207 - 11813130
Alignment:
Q  187 ataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||||   ||||||||||||  ||| |||||| |||||||||||||||||| | ||| ||||  |||||||||    
T  11813207 ataaaataaaagaaaactgtttccatataatttataatctgttttcataagctatcttcaagagcttacagaaataag 11813130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 27320259 - 27320307
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttcca 211  Q
    |||||||||| | |||||||||||||| ||||||||||||||| ||||||    
T  27320259 gtataagctattcctatagcaaaagat-aaataaagtcaaactatttcca 27320307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 33209345 - 33209268
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||| |||||||   ||||||||||||||||| |||||||| ||  |||  |||||||| |||| |||||||||    
T  33209345 ataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataagctatttttataagctat 33209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 34551077 - 34551146
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||| |||||||||| || |||||||| ||||| ||  ||||||||||| ||||||| |||| |||||||    
T  34551077 tataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagttatcctg 34551146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 34788554 - 34788505
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttcca 211  Q
    |||||||||| || |||  | |||||||||||||||||||||||||||||    
T  34788554 gtataagctatttttatgaccaaagataaaataaagtcaaactgtttcca 34788505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 35298605 - 35298524
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaa-gtaagttataagctgttttcataagctatc 242  Q
    |||||||||| |||  || ||||||||||||||||| ||||| |||| |||  |||  |||||| |||||||||||||||||    
T  35298605 gtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatc 35298524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 35534987 - 35534942
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    ||||||||| |||||||  ||||| |||||||||||||||||||||    
T  35534987 tataagctatttctataataaaagttaaaataaagtcaaactgttt 35534942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 787211 - 787147
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||||||||||||||| ||||  ||  |||| ||||| ||||||||||||| |||| |||||    
T  787211 aagataaaataaagtcaaattgttatcatataagctataaactgttttcataagttatcttgaag 787147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 2364600 - 2364560
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    ||||| |||| || |||||||||||||||||||||||||||    
T  2364600 gtatacgctatttttatagcaaaagataaaataaagtcaaa 2364560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 2698738 - 2698782
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||| |||||||||||||  |||||||||||| ||||||||    
T  2698738 ataagctatttctatagcaaaaagtaaaataaagtcgaactgttt 2698782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 5071083 - 5071019
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||| |||| |||||||||||||||||| ||| ||  ||| || |||| ||||||||||||    
T  5071083 ttctatagtaaaatataaaataaagtcaaacttttttcatataacttgtaagatgttttcataag 5071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 16211013 - 16210933
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| |||||||| ||| ||||||||||||| | | ||||| ||  |||| |||||| |||||||| || |||||    
T  16211013 gtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttcaaaacctatc 16210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20672729 - 20672761
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||| ||||||||||||||||||||||||||||    
T  20672729 tataacaaaagataaaataaagtcaaactgttt 20672761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 26056028 - 26056108
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||| | |||||||||||||| || |||||||||  ||| |||| ||| | || |||| ||||||||||    
T  26056028 gtataagctaattctaaaacaaaagataaaatatagccaaactgttctcaaataagctattaactatttttataagctatc 26056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 29168177 - 29168145
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaa 196  Q
    |||||||| ||||||||||||||||||||||||    
T  29168177 ataagctatttctatagcaaaagataaaataaa 29168145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 30628029 - 30627949
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| |||| || |||||||||||||||| | ||| |||||    ||||| |||||| |||||||||||| ||||    
T  30628029 gtataagctatttctgtaacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagttatc 30627949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 33912096 - 33912152
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagc 238  Q
    ||||| ||||||||| |||||||||||| |  ||||||||||| ||||| |||||||    
T  33912096 aaaagttaaaataaactcaaactgtttctatataagttataagttgtttacataagc 33912152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 35374489 - 35374425
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    ||||||||| |||||||||||||||| ||| ||||| ||  |||| ||||| ||| |||||||||    
T  35374489 ttctatagcgaaagataaaataaagttaaattgttttcatataagctataatctgatttcataag 35374425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 5006636 - 5006553
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||| ||  |||| |||||  ||||||||||||||| ||||    
T  5006636 gtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctg 5006553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 27548207 - 27548286
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||| |||  |||||||||||||||||||||| || ||||| ||  |||| ||||||||||||||||||||||||    
T  27548207 tataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatc 27548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 2894760 - 2894830
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttc 232  Q
    |||||||||| ||||||| ||||||||||| ||||||  |||||||| ||||||||||||||||| |||||    
T  2894760 gtataagctatttctataacaaaagataaattaaagttgaactgttttcaagtaagttataagctattttc 2894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 40689107 - 40689030
Alignment:
Q  168 gctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    |||| |||||||||||||||||||||||||| ||| | ||| ||  |||| |||||||||| ||||||||||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 40689030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 27481421 - 27481341
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| ||||||| |||| |||||||  |||||||||||||||||  |||| |||||| | |||||||||||||||    
T  27481421 gtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatc 27481341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 28340523 - 28340444
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| ||||  | ||||  |||||||||||||||||||||| || |||||||||||| |||||||| |||||||    
T  28340523 gtataagctatttcttcaacaaacaataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctat 28340444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 29363483 - 29363562
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataa 263  Q
    ||||||||||||||||||||||||| ||  | |||||||||||||| ||||||| ||||||| || |||| | |||||||    
T  29363483 aagataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 44910551 - 44910656
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||| ||   ||| || ||| ||||||||||| ||||| || || |||||| ||||||||     
T  44910551 aagctatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagcttgtggaaataagc 44910650  T
Q  266 cgaaaa 271  Q
    ||||||    
T  44910651 cgaaaa 44910656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 35536050 - 35536114
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagct 226  Q
    |||||||||| ||||||| || ||||||||||||||||||| ||||| ||  |||||||||||||    
T  35536050 gtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagct 35536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 30456572 - 30456497
Alignment:
Q  167 agctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||| ||||| | |||||||||||||||||||||| ||||| ||  |||||||||||  |||||||||| |||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatc 30456497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 44151588 - 44151505
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataag 264  Q
    ||||||||| |||||||| ||||||||||||  |||| |||||| ||||||||||| ||||| ||||  |||| | ||||||||    
T  44151588 caaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataag 44151505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 1417207 - 1417285
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagcta 240  Q
    |||||| ||| || |||| |||||||||||||||||||||| ||||| ||  ||||  ||||| |||||||||||||||    
T  1417207 gtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 7244645 - 7244691
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||    
T  7244645 gtataagctatttctatatcaaaagataaaagaaagtcaaactgttt 7244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 10079467 - 10079421
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||    
T  10079467 gtataagctacttctataacaaaagataaaatataatcaaactgttt 10079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 17989149 - 17989059
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||| ||| || |||| ||||| |||||||||||||||||||||| ||  |||  |||||  |||||||||||||| |||||||| ||||    
T  17989149 tataaactagttttataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagctt 17989059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 29274884 - 29274961
Alignment:
Q  164 ataagctacttctatagcaaaagataaaa--taaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    ||||||||||| |||| ||||||||||||  |||||||||| |||||| | |||||||||||| ||||| || |||||    
T  29274884 ataagctacttttataacaaaagataaaaaataaagtcaaattgtttctatgtaagttataagttgtttgcaaaagct 29274961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 30161013 - 30160971
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  30161013 aagctatttctatggcaaaagataaaataaagtcaaactgttt 30160971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 31338471 - 31338533
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||||||||||||||||||||  |  ||||||||||| ||||| ||||| |||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcct 31338533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 9527205 - 9527140
Alignment:
Q  174 tctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||| ||||||||| |||||||||||||||||| ||  |||  |||||| ||||||||||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 2048167 - 2048088
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||||| |||| || ||||||||||| ||||||||||||| || ||  |||| |||||||| ||| |||||||||||    
T  2048167 gtataagctatttcttta-caaaagataaattaaagtcaaactgatttcagataagctataagctttttacataagctatc 2048088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 5369789 - 5369737
Alignment:
Q  191 aataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    |||||||||||||||||| ||  || | |||||||||||||||||||||||||    
T  5369789 aataaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 12110325 - 12110389
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaag 248  Q
    ||||||||||||||||||| |||||     |||| |||||||||||||||||||||||| |||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaag 12110389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 23918919 - 23918991
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    |||||||||||||||||||||| ||||| ||  |||| ||||| ||||  |||||| |||| |||||||||||    
T  23918919 caaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaagggctt 23918991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 27492738 - 27492818
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||| ||| ||||||| |||||| | ||||||| ||||||| ||| ||  ||||| ||||| |||||||||||||||||    
T  27492738 gtataaactatttctataacaaaagttcaaataaaatcaaacttttttcatataagtaataagatgttttcataagctatc 27492818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 34083641 - 34083577
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||||||||||||||||||||| ||| |||||     |||| |||||||||||||||||||    
T  34083641 ttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 46531490 - 46531522
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||||||||||||||||||||||||||    
T  46531490 tatagcaaaagataaaataaagtcaaactgttt 46531522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 46825049 - 46825121
Alignment:
Q  170 tacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||||||  ||||||||||||||||||||| ||||| ||  ||||  |||| | ||||||||||||||||    
T  46825049 tacttctataaaaaaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatc 46825121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 3802266 - 3802187
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| |||||||  ||||| |||||||||||||||  |||| ||  ||| |||||||||||||| | |||||||    
T  3802266 gtataagctatttctataataaaaggtaaaataaagtcaaatcgttttcatataaattataagctgtttttaaaagctat 3802187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 7274424 - 7274503
Alignment:
Q  183 aaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaata 262  Q
    |||||||||||||||  ||||||||| || ||| | ||| |||| |||||||||||||| ||| || | |||||||||||    
T  7274424 aaagataaaataaaggtaaactgttttcatgtatgctatcagctattttcataagctatactgcagtgtttgtagaaata 7274503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 31341137 - 31341180
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactg 205  Q
    |||||||||| || |||| |||||||||||||||||||||||||    
T  31341137 gtataagctatttgtataacaaaagataaaataaagtcaaactg 31341180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 38010676 - 38010739
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||||||||| |||| |||| ||||| ||  |||| |||||||||||||||||| |||||||    
T  38010676 caaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcct 38010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 42656459 - 42656498
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  42656459 tataagctatttctataacaaaagataaaataaagtcaaa 42656498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 45593846 - 45593767
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    |||||||||| |||| || ||||| |||||||||||||||||||||| ||  |||||||  |||||| |||  |||||||    
T  45593846 gtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagttaggagctgtgttctgaagctat 45593767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 514767 - 514821
Alignment:
Q  219 tataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaata 273  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||  |||||||    
T  514767 tataagctgttttcataagctatcctggagagcttgtcaaaataagctgaaaata 514821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 264
Target Start/End: Complemental strand, 3610867 - 3610765
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaat 261  Q
    |||||||||| ||||| | ||||||||||||| ||| ||||||||||     |||| |||||| ||||||| ||| |||||||  || |||| |||||||    
T  3610867 gtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaat 3610768  T
Q  262 aag 264  Q
    |||    
T  3610767 aag 3610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 4966118 - 4966200
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataa 263  Q
    |||| ||||||||||  |||||| |||| ||  | || |||||||||||||||||||| ||||||||| |||| | |||||||    
T  4966118 caaaggataaaataatatcaaacagttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaataa 4966200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 5628691 - 5628613
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    |||||||| || |||| |||| ||||||||| |||  |||||||| ||  |||| ||||||||||||||||||| ||||    
T  5628691 ataagctatttttataacaaatgataaaatagagttgaactgttttcatttaagatataagctgttttcataagatatc 5628613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 21453241 - 21453319
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    |||||| |||| || |||||||||| ||||||||||  ||||  ||  |||| ||||| ||||||||||||||||||||    
T  21453241 aagctatttctgtaacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctatcct 21453319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 22759132 - 22759210
Alignment:
Q  165 taagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||||| || |||| |||||||||||||||||  ||| ||||| ||  |||| || |||||| |||||||||||||||    
T  22759132 taagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatcc 22759210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 24975847 - 24975893
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||| ||||||||||| ||||||||||||||||| | ||||||||    
T  24975847 gtataatctacttctataacaaaagataaaataaaggcgaactgttt 24975893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 27626251 - 27626209
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| |||||| |||||||||||||||||    
T  27626251 gtataagctatttctatatcaaaagctaaaataaagtcaaact 27626209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 28165045 - 28165143
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagtcgaaaa 271  Q
    ||||||| ||||||||||||| |||||||| |||||  |  |||| ||||| |||| || |||||||||| || || |||| | ||||||||| |||||    
T  28165045 ttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaa 28165143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 28178912 - 28178950
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtca 200  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  28178912 gtataagctatttctataacaaaagataaaataaagtca 28178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 28340951 - 28340889
Alignment:
Q  182 aaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcct 244  Q
    ||||||| |||| |||||||| ||||  ||  |||| ||||||||||||||||||||||||||    
T  28340951 aaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatcct 28340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 31002723 - 31002781
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagct 239  Q
    |||||||||||||||||||||| | ||| ||  |||| ||||||||||||| |||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 33894566 - 33894611
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  33894566 gtataagctatttctataacaaaagataaaat-aagtcaaactgttt 33894611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 35809031 - 35808989
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| |||||||||||||| |||||||||    
T  35809031 gtataagctatttctataacaaaagataaaatatagtcaaact 35808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43153029 - 43152983
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  43153029 gtataagctatttctataacaaaagataaaataaagttaaattgttt 43152983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 45813306 - 45813268
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaa 201  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  45813306 tataagctatttctataccaaaagataaaataaagtcaa 45813268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 1350367 - 1350278
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||| || ||||||| |||  || |||| ||||||||||| ||| ||  |||  |||||||||||||||||| ||||||||||| ||||    
T  1350367 ataagttatttctataacaattgacaaaagaaagtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagctt 1350278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 3468579 - 3468660
Alignment:
Q  184 aagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||||||| |||||||||| ||| |   ||||||||||||| ||||||||| |||||||  ||  ||||| |||||||||    
T  3468579 aagataaaatgaagtcaaactattttcgtataagttataagcttttttcataatctatcctagagaacttgtggaaataagt 3468660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 7453514 - 7453485
Alignment:
Q  173 ttctatagcaaaagataaaataaagtcaaa 202  Q
    ||||||||||||||||||||||||||||||    
T  7453514 ttctatagcaaaagataaaataaagtcaaa 7453485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 23434273 - 23434204
Alignment:
Q  175 ctatagcaaaagataaaataaagtcaaac-tgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||| |||||||||||||||| |||||  ||||| ||| |||| ||| |||| ||||||||||||||||    
T  23434273 ctataacaaaagataaaataaaatcaaaagtgttttcaaataagctattagctattttcataagctatcc 23434204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 24973891 - 24973936
Alignment:
Q  166 aagctacttctatagcaaaagataaaataaagtcaaactgtttcca 211  Q
    |||||| ||||||| |||||||||||||||| ||||| ||||||||    
T  24973891 aagctatttctataacaaaagataaaataaattcaaattgtttcca 24973936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 28702731 - 28702776
Alignment:
Q  200 aaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||||||| || ||||||||||  |||||||||||||||||||||    
T  28702731 aaactgttttcatgtaagttatacactgttttcataagctatcctg 28702776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 33673021 - 33673054
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataa 195  Q
    ||||||||||||||||||||||| ||||||||||    
T  33673021 gtataagctacttctatagcaaaggataaaataa 33673054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 39591593 - 39591548
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||||| || ||||||| |||||||||||||||||||||| |||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttt 39591548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 46081977 - 46082050
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaa-ctgtttccaagtaagttataagctgttttcata 235  Q
    ||||||||| ||||||| | |||| ||||| ||||||||| |||||| ||  ||||||||||| ||||||||||    
T  46081977 tataagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttcata 46082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 1373648 - 1373576
Alignment:
Q  181 caaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||||||||| |||||||||||| ||| ||  ||   ||||| |||||||||||| ||||| ||||||||||    
T  1373648 caaaagataaattaaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggctt 1373576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 4970913 - 4970881
Alignment:
Q  164 ataagctacttctatagcaaaagataaaataaa 196  Q
    |||||||| ||||||||||||||||||||||||    
T  4970913 ataagctatttctatagcaaaagataaaataaa 4970881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 5715164 - 5715124
Alignment:
Q  163 tataagctacttctatagcaaaagataaaataaagtcaaac 203  Q
    ||||||||| ||||||| | |||||||||||||||||||||    
T  5715164 tataagctatttctataacgaaagataaaataaagtcaaac 5715124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 242
Target Start/End: Complemental strand, 18350782 - 18350754
Alignment:
Q  214 taagttataagctgttttcataagctatc 242  Q
    |||||||||||||||||||||||||||||    
T  18350782 taagttataagctgttttcataagctatc 18350754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 19123198 - 19123238
Alignment:
Q  168 gctacttctatagcaaaagataaaataaagtcaaactgttt 208  Q
    |||| ||||||| |||||||||||||||| |||||||||||    
T  19123198 gctatttctatatcaaaagataaaataaattcaaactgttt 19123238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 29278629 - 29278677
Alignment:
Q  189 aaaataaagtcaaactgtttccaagtaagttataagctgttttcataag 237  Q
    |||||||||||||| |||||| | |||||||||||| ||||| ||||||    
T  29278629 aaaataaagtcaaattgtttctatgtaagttataagttgtttccataag 29278677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 40439052 - 40439100
Alignment:
Q  217 gttataagctgttttcataagctatcctgaagggcttgtagaaataagt 265  Q
    |||||||| ||||||||| ||||||||||||| |||| | |||||||||    
T  40439052 gttataagttgttttcattagctatcctgaagagcttatggaaataagt 40439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 47177579 - 47177659
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||| || ||||||| ||||| | |||| ||||| ||| ||||| ||  |||| ||||||||||||||| ||||||||    
T  47177579 gtataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatc 47177659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 49060483 - 49060523
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaa 202  Q
    |||||||||| ||||||| ||||| ||||||||||||||||    
T  49060483 gtataagctatttctataacaaaaaataaaataaagtcaaa 49060523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 40188 - 40265
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctgaagggctt 253  Q
    ||||| |||||||||| |||||||||   ||||||| ||||| |||||| |||||||||||| |||||||||| ||||    
T  40188 tatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagttgttttcataagttatcctgaagagctt 40265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 1201 - 1159
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  1201 gtataagctatttctataacaaaagataaaataaagtcaaact 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 2774 - 2816
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaact 204  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  2774 gtataagctatttctataacaaaagataaaataaagtcaaact 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 27519 - 27599
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatc 242  Q
    ||||||| || ||||||| || ||||||||||||||||||| ||||| ||  |||  |||||| ||||||||||| |||||    
T  27519 gtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 9902 - 9821
Alignment:
Q  162 gtataagctacttctatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcc 243  Q
    ||||||| || ||||||| ||||| ||||||| ||||||||  |||| ||  ||||||||| | ||||||||||| ||||||    
T  9902 gtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgttttcataatctatcc 9821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 5643 - 5712
Alignment:
Q  176 tatagcaaaagataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctatcctg 245  Q
    ||||| |||||||||| |||||||||   ||||||| ||||| ||||||  ||||||||||| |||||||    
T  5643 tatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagtcgttttcataagttatcctg 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 4327 - 4271
Alignment:
Q  185 agataaaataaagtcaaactgtttccaagtaagttataagctgttttcataagctat 241  Q
    ||||||||||||||||||| |||| ||  |||  ||||||||||||| |||||||||    
T  4327 agataaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University