View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19259_high_16 (Length: 302)
Name: NF19259_high_16
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19259_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 12 - 285
Target Start/End: Complemental strand, 5227670 - 5227392
Alignment:
| Q |
12 |
atgaagctaagaacagaacagtgaccgattgattaagacatggctgttgcatgttacattacaattatacattgttatgcttttttggatttgattaaga |
111 |
Q |
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| T |
5227670 |
atgaagctaagaacagaacagtgaccgattgattaagacatggctgttgcatgttacattacaattatacattgttatgcttttttggatttgattaaga |
5227571 |
T |
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| Q |
112 |
catgtgcatgtaaaatgcaaaatgaaatttaattcgataaatgcttaatttaaagcatattaacagaccttttgtcatt-----gctatactacaattac |
206 |
Q |
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| T |
5227570 |
catgtgcatgtaaaatgcaagatgaaatttaattcgataaatgcttaatttaaagcatattaacagaccttttgtcattgctaagctatactacaattac |
5227471 |
T |
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| Q |
207 |
attctgtatcgatcataacattgtcaacagaactacatatttaacaatgaatttaatgttgatgcagaatgcttatttt |
285 |
Q |
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| T |
5227470 |
attctgtatcgatcataacattgtcaacagaactacatatttaacaatgaatttaatgttgatgcagaatgcttatttt |
5227392 |
T |
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