View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19259_high_17 (Length: 296)
Name: NF19259_high_17
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19259_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 39537373 - 39537096
Alignment:
| Q |
1 |
gaaaagtgacgaaaaattgaaagagggttgaacaatagcctttgtatgagccaaaactaaaaaccaaaacagcgaaatttacaaagatgggtaaactacc |
100 |
Q |
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| T |
39537373 |
gaaaagtgacgaaaaattgaaagagagttgaacaatagcctttgtatgagccaaaacaaaaaaccaaaacaaggaaatttacaaagataggtaaactacc |
39537274 |
T |
|
| Q |
101 |
tcagtagacagcaaaaatttgaagggcgatttgcacagtaaaataccaaaaagacagcaaagcattgttactttcaaactcataaagtcaattgacgtat |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39537273 |
tcagtagacagcaaaaatttgaagggcaatttgcacagtaaaataccaaaaagacagcaaagcattgttactttcaaactcataaagtcaattgacgtat |
39537174 |
T |
|
| Q |
201 |
tccttttaacaaactgagctatctctgtccagagccatgaacaagggttctttgaccaaatttctgcctgcttggaaa |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
39537173 |
tccttttaacaaactgagctatctctgtccagagccatgaacaagggttctttcaccaaatttctgcctgcttggaaa |
39537096 |
T |
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