View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19259_high_22 (Length: 248)
Name: NF19259_high_22
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19259_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 21434338 - 21434106
Alignment:
| Q |
1 |
acacactcaacattttgtaatccaccccagtagtggcaagtaaatttgtttaaaatgagacatttggagaaattgataaatattgggttcctcaacaagt |
100 |
Q |
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| T |
21434338 |
acacactcaacattttgtaatccaccccagtagtggcaagtaaatttgtttaaaatgagacatttggagaaattgataaatattgggttcctcaacaagt |
21434239 |
T |
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| Q |
101 |
taggttcaagaagtggtaatatcgagaaaaattgaaggtttttagaggaacgatctatacataatgagacagaggatacttcagaaacatggagaggcag |
200 |
Q |
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|||||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
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| T |
21434238 |
taggttcaagaaatggtaatactgagaaaacttgaaggtttctagaggaacgatctatacataatgagatagaggatacttcagaagcatggagaggcag |
21434139 |
T |
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| Q |
201 |
agaaaagaatattcgttcatcacatgttgtaac |
233 |
Q |
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||||||||||| ||||||||||||||||||||| |
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| T |
21434138 |
agaaaagaatactcgttcatcacatgttgtaac |
21434106 |
T |
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