View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19259_high_23 (Length: 243)

Name: NF19259_high_23
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19259_high_23
NF19259_high_23
[»] chr3 (26 HSPs)
chr3 (7-155)||(21658838-21658987)
chr3 (156-243)||(51465802-51465889)
chr3 (156-241)||(55400097-55400182)
chr3 (159-243)||(52937279-52937363)
chr3 (156-241)||(21005064-21005149)
chr3 (156-241)||(24482851-24482936)
chr3 (156-241)||(46852020-46852105)
chr3 (156-241)||(3953363-3953448)
chr3 (150-241)||(46253720-46253809)
chr3 (167-237)||(20080174-20080245)
chr3 (154-241)||(34057839-34057926)
chr3 (155-241)||(24095293-24095379)
chr3 (154-243)||(21196220-21196309)
chr3 (156-243)||(6999266-6999353)
chr3 (158-241)||(39697112-39697195)
chr3 (156-241)||(50206858-50206943)
chr3 (155-243)||(36412219-36412308)
chr3 (160-241)||(46019560-46019641)
chr3 (166-218)||(18741237-18741289)
chr3 (166-241)||(26645124-26645199)
chr3 (161-211)||(9719341-9719391)
chr3 (156-241)||(23183511-23183596)
chr3 (160-241)||(24480343-24480424)
chr3 (146-235)||(55282568-55282657)
chr3 (156-243)||(37410971-37411058)
chr3 (156-233)||(37927092-37927170)
[»] chr1 (34 HSPs)
chr1 (155-241)||(15704949-15705035)
chr1 (156-243)||(36577300-36577387)
chr1 (155-241)||(52362580-52362666)
chr1 (156-241)||(40316832-40316917)
chr1 (156-241)||(50328029-50328114)
chr1 (152-243)||(10889930-10890021)
chr1 (155-241)||(13489760-13489846)
chr1 (155-241)||(34254238-34254324)
chr1 (157-241)||(15015496-15015579)
chr1 (155-243)||(35136940-35137028)
chr1 (155-243)||(48326064-48326151)
chr1 (157-243)||(33358047-33358133)
chr1 (156-241)||(32914960-32915045)
chr1 (156-241)||(46543331-46543415)
chr1 (156-241)||(50781458-50781543)
chr1 (159-241)||(52714792-52714874)
chr1 (156-241)||(29154876-29154961)
chr1 (155-243)||(34040385-34040475)
chr1 (156-243)||(50881998-50882085)
chr1 (152-241)||(8200173-8200262)
chr1 (154-241)||(8447834-8447921)
chr1 (156-243)||(48220032-48220119)
chr1 (156-237)||(47215617-47215699)
chr1 (156-241)||(6143781-6143866)
chr1 (174-243)||(25259179-25259248)
chr1 (167-243)||(45417868-45417944)
chr1 (161-211)||(51571239-51571289)
chr1 (150-217)||(29147755-29147823)
chr1 (155-243)||(45383856-45383944)
chr1 (156-243)||(47721505-47721592)
chr1 (156-243)||(47728497-47728584)
chr1 (156-231)||(50824849-50824924)
chr1 (177-243)||(44294111-44294177)
chr1 (157-233)||(50433875-50433952)
[»] chr5 (22 HSPs)
chr5 (155-243)||(8675320-8675408)
chr5 (155-241)||(32912136-32912222)
chr5 (156-243)||(10649531-10649618)
chr5 (156-239)||(19481070-19481153)
chr5 (155-241)||(15478756-15478842)
chr5 (156-241)||(189591-189676)
chr5 (160-243)||(38704089-38704172)
chr5 (156-241)||(19839874-19839959)
chr5 (156-241)||(34270425-34270510)
chr5 (156-241)||(43441836-43441921)
chr5 (159-243)||(15952936-15953020)
chr5 (156-239)||(41175594-41175677)
chr5 (155-241)||(34124719-34124805)
chr5 (157-243)||(3640086-3640172)
chr5 (155-241)||(43213946-43214032)
chr5 (161-241)||(1839238-1839318)
chr5 (156-241)||(10658992-10659076)
chr5 (156-241)||(18397053-18397138)
chr5 (156-199)||(189522-189565)
chr5 (166-241)||(30004689-30004764)
chr5 (159-243)||(9226396-9226481)
chr5 (160-224)||(6517836-6517900)
[»] chr4 (35 HSPs)
chr4 (156-243)||(22819745-22819832)
chr4 (156-241)||(17683439-17683524)
chr4 (159-243)||(46405865-46405949)
chr4 (153-243)||(13086118-13086208)
chr4 (151-241)||(26718466-26718556)
chr4 (151-241)||(26731094-26731184)
chr4 (157-241)||(13139246-13139329)
chr4 (156-241)||(39344868-39344953)
chr4 (157-241)||(45143562-45143646)
chr4 (157-241)||(45152331-45152415)
chr4 (155-239)||(47099120-47099204)
chr4 (151-241)||(14010001-14010091)
chr4 (156-241)||(31657744-31657829)
chr4 (150-242)||(43769808-43769900)
chr4 (156-243)||(38338810-38338897)
chr4 (156-241)||(2999210-2999295)
chr4 (156-243)||(9362566-9362654)
chr4 (156-241)||(52846117-52846202)
chr4 (156-243)||(12138949-12139036)
chr4 (160-243)||(18882867-18882950)
chr4 (159-224)||(21172395-21172460)
chr4 (160-241)||(56271458-56271539)
chr4 (156-243)||(1815889-1815976)
chr4 (165-243)||(49896563-49896641)
chr4 (156-241)||(53654637-53654723)
chr4 (156-243)||(12799810-12799897)
chr4 (156-243)||(32696277-32696364)
chr4 (166-211)||(20760383-20760429)
chr4 (166-211)||(20766774-20766820)
chr4 (161-211)||(42491202-42491252)
chr4 (161-211)||(50831648-50831698)
chr4 (161-217)||(12595523-12595580)
chr4 (157-241)||(39312504-39312589)
chr4 (201-241)||(27326685-27326725)
chr4 (156-211)||(40609742-40609798)
[»] chr6 (18 HSPs)
chr6 (156-241)||(754326-754411)
chr6 (159-243)||(1369456-1369540)
chr6 (155-243)||(13143269-13143357)
chr6 (156-241)||(35213449-35213534)
chr6 (156-243)||(6531068-6531155)
chr6 (156-243)||(18141189-18141276)
chr6 (156-241)||(32459404-32459489)
chr6 (160-236)||(32046801-32046877)
chr6 (154-240)||(3832562-3832648)
chr6 (160-241)||(20822761-20822841)
chr6 (166-241)||(5028164-5028239)
chr6 (155-236)||(2688951-2689033)
chr6 (154-233)||(868838-868917)
chr6 (166-241)||(2943532-2943607)
chr6 (156-218)||(23628482-23628545)
chr6 (166-243)||(6856061-6856139)
chr6 (166-211)||(31883201-31883246)
chr6 (166-241)||(30621837-30621913)
[»] chr2 (36 HSPs)
chr2 (156-241)||(32869924-32870009)
chr2 (156-241)||(13765498-13765583)
chr2 (156-243)||(15269957-15270044)
chr2 (155-241)||(35589274-35589360)
chr2 (156-241)||(6170728-6170813)
chr2 (156-241)||(6998956-6999041)
chr2 (156-241)||(24562905-24562990)
chr2 (159-243)||(39449363-39449447)
chr2 (154-241)||(39213656-39213743)
chr2 (159-241)||(2563802-2563884)
chr2 (156-242)||(3012740-3012826)
chr2 (156-241)||(23352795-23352880)
chr2 (159-243)||(22525887-22525971)
chr2 (157-241)||(37105736-37105820)
chr2 (159-241)||(13347705-13347788)
chr2 (160-241)||(9634328-9634409)
chr2 (147-243)||(7574531-7574627)
chr2 (159-243)||(36211951-36212035)
chr2 (156-243)||(2221089-2221176)
chr2 (156-243)||(40936952-40937039)
chr2 (156-218)||(36643972-36644034)
chr2 (160-241)||(44254699-44254780)
chr2 (155-243)||(11091246-11091334)
chr2 (156-241)||(10711822-10711907)
chr2 (151-243)||(5054704-5054796)
chr2 (148-243)||(34119532-34119627)
chr2 (157-224)||(36517311-36517378)
chr2 (160-241)||(28245826-28245906)
chr2 (156-243)||(1836109-1836196)
chr2 (160-218)||(1415930-1415988)
chr2 (150-223)||(7258443-7258517)
chr2 (157-218)||(4023239-4023300)
chr2 (150-237)||(4061844-4061931)
chr2 (156-243)||(17898121-17898209)
chr2 (201-237)||(18876854-18876890)
chr2 (157-241)||(25881642-25881726)
[»] chr8 (23 HSPs)
chr8 (151-243)||(42569612-42569704)
chr8 (156-243)||(16872044-16872131)
chr8 (155-241)||(31597046-31597132)
chr8 (156-243)||(30439394-30439481)
chr8 (155-240)||(34018907-34018992)
chr8 (156-243)||(36885376-36885463)
chr8 (156-241)||(12707247-12707333)
chr8 (155-237)||(2733089-2733172)
chr8 (156-237)||(9208166-9208248)
chr8 (156-241)||(28646770-28646856)
chr8 (156-241)||(28651354-28651440)
chr8 (160-241)||(7472919-7472999)
chr8 (157-241)||(45508626-45508715)
chr8 (167-241)||(41541955-41542029)
chr8 (159-212)||(45519683-45519736)
chr8 (153-233)||(36568067-36568147)
chr8 (166-212)||(3441305-3441351)
chr8 (153-211)||(36514449-36514507)
chr8 (159-224)||(4658145-4658210)
chr8 (167-216)||(41701289-41701338)
chr8 (156-243)||(29440410-29440498)
chr8 (166-237)||(36424499-36424571)
chr8 (146-233)||(42110060-42110148)
[»] chr7 (23 HSPs)
chr7 (156-241)||(28036842-28036927)
chr7 (156-241)||(43573431-43573516)
chr7 (156-241)||(11352862-11352947)
chr7 (146-243)||(12645788-12645885)
chr7 (155-241)||(41894013-41894099)
chr7 (156-241)||(13729824-13729909)
chr7 (156-243)||(7817732-7817819)
chr7 (154-236)||(34757356-34757439)
chr7 (160-243)||(35588783-35588866)
chr7 (151-243)||(41458692-41458784)
chr7 (166-241)||(44184457-44184532)
chr7 (159-241)||(3343221-3343303)
chr7 (159-241)||(42555662-42555744)
chr7 (157-233)||(10055521-10055597)
chr7 (155-243)||(21822486-21822574)
chr7 (166-241)||(46532600-46532676)
chr7 (167-241)||(16980394-16980468)
chr7 (155-241)||(33180597-33180683)
chr7 (160-218)||(25067344-25067402)
chr7 (160-241)||(3062428-3062509)
chr7 (178-243)||(8920577-8920642)
chr7 (160-243)||(35452464-35452548)
chr7 (149-181)||(37899093-37899125)
[»] scaffold0141 (1 HSPs)
scaffold0141 (156-241)||(12030-12115)
[»] scaffold0136 (1 HSPs)
scaffold0136 (156-241)||(38523-38608)
[»] scaffold0532 (1 HSPs)
scaffold0532 (156-243)||(11060-11147)
[»] scaffold0221 (1 HSPs)
scaffold0221 (192-241)||(8312-8361)


Alignment Details
Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 21658987 - 21658838
Alignment:
Q  7 aatatatctatacctaacttttataaaactatatagaatcaatttccaatgcaacctctctccatnnnnnnnnnnnnnn-gcatctcttgtgcttgtaag 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||    
T  21658987 aatatatctatacctaacttttataaaactatatagaatcaatttccaatgcaacctctctccataaaaaaaacaaaaaagcatctcttgtgcttgtaag 21658888  T
Q  106 tcaatgacatagtggaagatgctgtttccaaacttttctcaatatttttt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658887 tcaatgacatagtggaagatgctgtttccaaacttttctcaatatttttt 21658838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 51465802 - 51465889
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  51465802 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 51465889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 55400182 - 55400097
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| ||| ||||||||||||||||||    
T  55400182 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaaattggtatttgcacgaaaa 55400097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 52937363 - 52937279
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||| ||||||||||||| ||||||    
T  52937363 gagtgttatttgaacaaccatttggttgataatttttgagacaaccataatttacaaagaaaaaattggtatttgcacaaaaatc 52937279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 21005064 - 21005149
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||  ||||||| ||||||||||||||||| |||||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  21005064 gaggagtgatatttgaagaaccatttggttgataacttttgggacaatcataatttataaagaaaaagttgatatttgcacgaaaa 21005149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 24482851 - 24482936
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||| | || |||||||| |||||||| ||| ||||| ||||||||||||||||||||||    
T  24482851 gaggagtgttatttgaacaaccatttggtttacaacttttgggacaaccataacttacaaagaaaaagttggtatttgcacgaaaa 24482936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 46852020 - 46852105
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| || ||||||||| ||||| ||||||| ||||||||||||||    
T  46852020 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaatcataatttacaaagaaaaagttgatatttgcacgaaaa 46852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 3953363 - 3953448
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||| ||||||||||| |||||||| || || ||||||||||||||| ||||||| |||||||| |||||    
T  3953363 gaggagtgttatttgaacaatcatttggttgacaatttttgagacaatcataatttataaagaaaaagttgatatttgcatgaaaa 3953448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 46253809 - 46253720
Alignment:
Q  150 ttttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||||| ||||||||||||||  | |||| || |||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  46253809 ttttttgaggagtgttatttgaacaaccat--gattgacaacttttgggacaaccataatttacaaagaaaatgttggtatttgcacgaaaa 46253720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 20080245 - 20080174
Alignment:
Q  167 tttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    |||||||||||| |||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||    
T  20080245 tttgaacaaccaatttggttgataatttttgtgacaaccataatttataaagaaaaagtaggtatttgcacg 20080174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 34057839 - 34057926
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||||  |||||||||||||||| |||| || |||| ||| ||| |||||||||||||| |||||||||| |||||||||||    
T  34057839 ttgaggagtgttgtttgaacaaccatttgattgacaacttttaggacaactataatttataaagaaaaagttggtaattgcacgaaaa 34057926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 24095293 - 24095379
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||| |||||||||||| || ||||  || |||||||||||| ||||| ||||| ||||||||||||||||    
T  24095293 tgaggagtgttatttgaacatccatttggttgacaacttttatgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaa 24095379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 21196309 - 21196220
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||||| ||||||||||||||||| |||| ||||| |||||||| ||||||||| ||||| ||| |  |||||||||||||||||    
T  21196309 ttgagaagtgttatttgaacaaccatttgattgacaatttatgggataatcataatttacaaagaaaaaatatgtatttgcacgaaaatc 21196220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 6999353 - 6999266
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || || ||||| |||||||||||| || || ||| |  |||||||||||||||||    
T  6999353 gaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataatttacaatgaaaaaatatgtatttgcacgaaaatc 6999266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 39697112 - 39697195
Alignment:
Q  158 ggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||| ||||||||||| ||||| |||| || |||||||| |||||||||||| ||||| ||| ||| ||||||||||||||    
T  39697112 ggagtgttatttgaacaactatttgattgacaacttttgggacaaccataatttacaaagaaaaaattgatatttgcacgaaaa 39697195  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 50206858 - 50206943
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||| |||||| |||| ||||| || |||| ||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  50206858 gaggagtgttatttaaacaactatttagttgacaacttttaggacaaccataatttacaaagaaaaagttgatatttgcacgaaaa 50206943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 36412308 - 36412219
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttgg-ttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||| |||||||||||||||||| |||| || || ||||| |||||||||||| ||||| | | |  |||||||||||||||||    
T  36412308 tgaggagtgttatttgaacaaccatttggtttgacaacttatgggacaaccataatttacaaagaaagaatatgtatttgcacgaaaatc 36412219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 46019641 - 46019560
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||||||||||||||||| || |||||| | |||||||||||| ||||| ||  | |||||||| |||||||    
T  46019641 agtgttatttgaacaaccatttggttgacaacttttggaacaaccataatttacaaagaaaagataggtatttgtacgaaaa 46019560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 18741289 - 18741237
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaaga 218  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  18741289 atttgaacaaccatttggtggataatttatgggacaaccataatttacaaaga 18741237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 26645199 - 26645124
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||| |||||| ||| ||||| |||||||| ||||||||| ||||| ||||| | |||||||| |||||    
T  26645199 atttgaacaactatttggatgacaatttatgggataatcataatttacaaagaaaaagtagatatttgcatgaaaa 26645124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 9719341 - 9719391
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    |||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  9719341 gtgttatttgaacaaccatttgattgacaacttttgggataaccataattt 9719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 23183596 - 23183511
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||| |||| || || |   | ||||||||||| |||||| |||||||||||||  |||||||    
T  23183596 gaggagtgttatttgaacaaccatttgattgacaacttattatacaaccataatttgtaaagaaaaagttggtatttaaacgaaaa 23183511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 24480343 - 24480424
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||||||||||  ||||||||||||| |||| | | || ||||||||| ||||| ||||| ||||||||||| ||||    
T  24480343 agtgttatttgaacaattatttggttgataactttttgcacaatcataatttacaaagaaaaagtaggtatttgcacaaaaa 24480424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 55282568 - 55282657
Alignment:
Q  146 aatattttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgca 235  Q
    |||| |||| || |||||| ||||||| |||||||||||||| || || || || |||  ||||||| ||||| ||||||||||||||||    
T  55282568 aataattttagaagagtgttatttgaataaccatttggttgacaacttatgagacaactgtaatttacaaagaaaaagttggtatttgca 55282657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 37411058 - 37410971
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||| ||||| ||  | ||  | |||||||||||| ||||  ||||| ||||||||| ||||||||    
T  37411058 gaggagtgttatttgaacaaccatttagttgacaacctatgaaacaaccataatttacaaagtaaaagtaggtatttgcgcgaaaatc 37410971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 37927092 - 37927170
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    ||||||||| ||||||||||||| |||| |||| || || || || |||||||||||||||||| ||| | ||||||||    
T  37927092 gaggagtgttatttgaacaaccaatttgattgacaacttgtgtgacaaccataatttataaagaaaaaataggtatttg 37927170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 15704949 - 15705035
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  15704949 tgaggagtgttatttgaacaaccatttggttgataacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaa 15705035  T

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Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 36577300 - 36577387
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  36577300 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaatc 36577387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 52362666 - 52362580
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  52362666 tgaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaa 52362580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 40316832 - 40316917
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  40316832 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaagttggtatttgcacgaaaa 40316917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 50328029 - 50328114
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  50328029 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 50328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 10889930 - 10890021
Alignment:
Q  152 ttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||||||| ||||||||||| |||||||||| || ||||| || |||||||||||| ||||| ||||||||||| ||||||||||||    
T  10889930 ttttgaggagtgttatttgaacaactatttggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatc 10890021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 13489846 - 13489760
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||||| |||||||||| || || ||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  13489846 tgaggagtgttatttgaacaactatttggttgacaacttctgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 13489760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 34254238 - 34254324
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||| ||||| |||||| |||||||||||||||    
T  34254238 tgaggagtgttatttgaacaatcatttggttgataacttttgggacaactataatttacaaagaaaaagtttgtatttgcacgaaaa 34254324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 15015579 - 15015496
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||| ||||| ||||||||||||||||||||||    
T  15015579 aggagtgttatttgaacaactatttggttgataattat-gggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 15015496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 35137028 - 35136940
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||| |||||||||| ||||||||||| ||||||| ||| |||||||||||| ||||| |||||| |||||||||| ||||||    
T  35137028 tgaggagtgttatttgaacaatcatttggttgacaatttttaggacaaccataatttacaaagaaaaagtttgtatttgcacaaaaatc 35136940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 48326151 - 48326064
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||| |||||||||||||||||||||| || |||||| | |||||||||||| ||||| |||||||||||||| |||||||||    
T  48326151 tgaggagtgttatttgaacaaccatttggttgacaacttttgg-acaaccataatttacaaagaaaaagttggtatttgtacgaaaatc 48326064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 33358047 - 33358133
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||| |||||||||||||||||||||| || || || || |||||||||||| ||||| ||||| ||||||||||||||||||    
T  33358047 aggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatc 33358133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 32914960 - 32915045
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||| |||||||||| || |||||| | || ||||||||| ||||| ||||||||||||||||||||||    
T  32914960 gaggagtgttatttgaacaactatttggttgacaacttttggaacaatcataatttacaaagaaaaagttggtatttgcacgaaaa 32915045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 46543331 - 46543415
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||| ||| | ||||||| ||||||||||||||    
T  46543331 gaggagtgttatttgaacaaccatttggttgataatttttgggacaattataattta-aaaaaaaaagttgatatttgcacgaaaa 46543415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 50781458 - 50781543
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||||| || || |||| ||| || ||||||||||||||| ||| ||||||||||||||||||    
T  50781458 gaggagtgttatttgaacaaccatttggtagacaacttttaggacaatcataatttataaagaaaaaattggtatttgcacgaaaa 50781543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 52714792 - 52714874
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| ||||||||||||||||| |||| || |||||||| ||| |||||||| ||||| |||||||||| |||||||||||    
T  52714792 gagtgttatttgaacaaccatttgattgacaacttttgggacaacaataatttacaaagaaaaagttggtaattgcacgaaaa 52714874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 29154961 - 29154876
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || || ||||| ||| |||||||| ||||| || || ||||||||||||||||    
T  29154961 gaggagtgttatttgaacaaccatttggttgacaacttatgggacaacgataatttacaaagaaaacgtaggtatttgcacgaaaa 29154876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 34040385 - 34040475
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttgg--tatttgcacgaaaatc 243  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||| |||| |  |||| ||||| ||||||||  ||||||||||||||||    
T  34040385 tgagaagtgtaatttgaacaaccatttgattgataatttttgggacaaccgtcgtttacaaagaaaaagttggtatatttgcacgaaaatc 34040475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 50881998 - 50882085
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||||||||| |||| ||||| || || || ||||||||||||||| ||| |  |||||||||||||||||    
T  50881998 gaggagtgttatttgaacaaccatttgattgacaatttatgtgacaatcataatttataaagaaaaaatgagtatttgcacgaaaatc 50882085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 8200262 - 8200173
Alignment:
Q  152 ttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||| ||||||||| || ||||||||| || || ||||| |||||||||||| ||||| |||||  ||| |||||||||||    
T  8200262 ttttgaggagtgttatttgaacagccttttggttgacaacttatgggacaaccataatttacaaagaaaaagtacgtagttgcacgaaaa 8200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 8447921 - 8447834
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||| |||||||||| ||||| |||||||| || || || || ||||||||| ||||| ||||||| ||||||||| ||||    
T  8447921 ttgaggagtgttatttgaacaatcatttagttgataacttatgtgacaatcataatttacaaagaaaaagttgatatttgcacaaaaa 8447834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 48220032 - 48220119
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||| ||||||||||| || || ||||| | ||||||| |  ||||| ||||||||||||||||| ||||||    
T  48220032 gaggagtgttatttgaacaatcatttggttgacaacttatgggaaagccataatcttcaaagaaaaagttggtatttgcacaaaaatc 48220119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 47215617 - 47215699
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    ||||||||| ||||||||||| | |||||||||||| ||||| || |||||||||||||||||| ||| |  |||||||||||    
T  47215617 gaggagtgttatttgaacaactaatttggttgataacttttgtgacaaccataatttataaagaaaaaatatgtatttgcacg 47215699  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 6143866 - 6143781
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||| |||||||||| ||||||||||| ||  |||  || |||||||||||| ||||| ||||| ||||||||||||||||    
T  6143866 gaggattgttatttgaacaatcatttggttgacaacatttaagacaaccataatttacaaagaaaaagtaggtatttgcacgaaaa 6143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 25259248 - 25259179
Alignment:
Q  174 aaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||||| | || |||| ||| |||||||||||||||||| ||| |||||||||||| |||||||    
T  25259248 aaccatttggtttaaaacttttaggacaaccataatttataaagaaaaaattggtatttgcatgaaaatc 25259179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 45417944 - 45417868
Alignment:
Q  167 tttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||||||||| |||| || || || || |||||||||||||||||| ||| |  |||||||||||||||||    
T  45417944 tttgaacaaccatttgattgacaacttatgtgacaaccataatttataaagaaaaaatatgtatttgcacgaaaatc 45417868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 51571239 - 51571289
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    |||| ||||||||||||||||| |||| ||||||||||| |||||||||||    
T  51571239 gtgttatttgaacaaccatttgattgacaatttttgggacaaccataattt 51571289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 29147755 - 29147823
Alignment:
Q  150 ttttttgaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaag 217  Q
    ||||| ||||||||| |||||||||| || ||||||||||||||| || || |||||||||||| ||||    
T  29147755 tttttagaggagtgttatttgaacaatcaatttggttgataatttatgtgacaaccataatttacaaag 29147823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 45383856 - 45383944
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||||  ||||||||||||||| |||||||| || ||  |||| ||||||||| ||||| ||| |   ||||||||||||||||    
T  45383856 tgaggagtgttgtttgaacaaccatttagttgataacttatgaaataatcataatttacaaagaaaaaatatatatttgcacgaaaatc 45383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 47721592 - 47721505
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||| ||||||||||| || || || || ||||| |||||||||||| ||||| |||||  |||||  ||||||||||    
T  47721592 gaggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataatttacaaagaaaaagtaagtattgacacgaaaatc 47721505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 47728584 - 47728497
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||| ||||||||||| || || || || ||||| |||||||||||| ||||| |||||  |||||  ||||||||||    
T  47728584 gaggagtgttatttaaacaaccatttagtggacaacttatgggacaaccataatttacaaagaaaaagtaagtattgacacgaaaatc 47728497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 50824924 - 50824849
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatt 231  Q
    ||||||||| ||||||||||||||||||| || || || ||  | |||||||||||| ||||| ||||| ||||||    
T  50824924 gaggagtgttatttgaacaaccatttggtggacaacttatgatacaaccataatttacaaagaaaaagtaggtatt 50824849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 44294177 - 44294111
Alignment:
Q  177 catttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| |||| || |||||||| ||| |||||||||||||| ||| ||  ||||||||||||||||    
T  44294177 catttgattgacaacttttgggacaactataatttataaagaaaaaattaatatttgcacgaaaatc 44294111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 50433952 - 50433875
Alignment:
Q  157 aggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    |||||||| ||||||||||| | |||| |||| || || || || |||||||||||||||||| ||||| ||||||||    
T  50433952 aggagtgttatttgaacaacgaatttgattgacaacttgtgtgacaaccataatttataaagaaaaagtaggtatttg 50433875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 8675320 - 8675408
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  8675320 tgaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 8675408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 32912222 - 32912136
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||||||| ||||||||    
T  32912222 tgaggagtgttatttgaacaaccatttggttgacaacttttgggacaatcataatttataaagaaaaagttggtatttacacgaaaa 32912136  T

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Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 10649618 - 10649531
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || ||||| || |||||||||||| ||||| ||||||||||| ||||||||||||    
T  10649618 gaggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaatc 10649531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 19481070 - 19481153
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaa 239  Q
    ||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||||| ||||| ||||||||||||||||||||    
T  19481070 gaggagtgttatttgaacaatcatttggttgataacttttgggacaactataatttacaaagaaaaagttggtatttgcacgaa 19481153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 15478842 - 15478756
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||||| |||||||||| ||||||||| | |||||||||||| ||||| ||||||| ||||||||||||||    
T  15478842 tgaggagtgttatttgaacaactatttggttgacaatttttggaacaaccataatttacaaagaaaaagttgatatttgcacgaaaa 15478756  T

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Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 189591 - 189676
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||| ||||||||||| || |||||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  189591 gaggagtgttatttgaacaatcatttggttgacaacttttgggacaatcataatttataaagaaaaagttgatatttgcacgaaaa 189676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 38704089 - 38704172
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||||||||||||||||| || | || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  38704089 agtgttatttgaacaaccatttgattaacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 38704172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 19839874 - 19839959
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| |||| ||||||||||| ||||||||||||| |||||||| |||||||||||| ||||| ||| ||| ||||||||||||||    
T  19839874 gaggcgtgttatttgaacaactatttggttgataacttttgggacaaccataatttacaaagaaaaaattgatatttgcacgaaaa 19839959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 34270510 - 34270425
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || ||||| || |||||||||||| ||||  ||||| ||||||||||||||||    
T  34270510 gaggagtgttatttgaacaaccatttggttgacaaattttgagacaaccataatttacaaaggaaaagtaggtatttgcacgaaaa 34270425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 43441921 - 43441836
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || ||||  || |||||||||||| ||||| ||| ||||||||||||||||||    
T  43441921 gaggagtgttatttgaacaaccatttggttgacaacttttaagacaaccataatttacaaagaaaaaattggtatttgcacgaaaa 43441836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 15952936 - 15953020
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| |||||||||||||||||||||| || || || || |||||||||||| ||||| ||||| ||||||||||||||||||    
T  15952936 gagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatc 15953020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 41175594 - 41175677
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaa 239  Q
    ||||||||| |||||||||||||||||||||| || || || || |||||||||||| ||||| ||||| ||||||||||||||    
T  41175594 gaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaa 41175677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 34124805 - 34124719
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||||||||||  |||| |||||||  || |||||||||||| ||||| ||||||||||||| ||||||||    
T  34124805 tgaggagtgttatttgaacaaccatttaattgacaatttttaagacaaccataatttacaaagaaaaagttggtatttacacgaaaa 34124719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 3640086 - 3640172
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||| |||||||| ||||||| ||||| || || || || |||||||||||||||||| ||||| |||||||||| |||||||    
T  3640086 aggagtgttatttgaactaccatttagttgacaacttatgtgacaaccataatttataaagaaaaagtgggtatttgcatgaaaatc 3640172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 43213946 - 43214032
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||||||||||||||| || ||||   | ||| |||||||||||||| ||| | ||||||||||||||||    
T  43213946 tgaggagtgttatttgaacaaccatttggttgacaacttttaaaacaactataatttataaagaaaaaataggtatttgcacgaaaa 43214032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 1839238 - 1839318
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| ||||||| | |||||||||||||||||| ||||| |||||||||||| ||||| ||| | | ||||||||||||||    
T  1839238 gtgttatttgaaaagccatttggttgataatttatgggacaaccataatttacaaagaaaaaatagatatttgcacgaaaa 1839318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 10658992 - 10659076
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||| |||| || |||||| | |||| ||||||||||||| ||| | | ||||||||||||||    
T  10658992 gaggagtgttatttgaacaaccatttgattgacaacttttggcacaaccgtaatttataaaga-aaaatagatatttgcacgaaaa 10659076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 18397053 - 18397138
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||| ||||||||||  |||||||||||||||||||| | ||  |||||||| ||||| ||| | ||||||||||||||||    
T  18397053 gaggaatgttatttgaacaattatttggttgataatttttggaacaattataatttacaaagaaaaaataggtatttgcacgaaaa 18397138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 189522 - 189565
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttggga 199  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||    
T  189522 gaggagtgttatttgaacaatcatttggttgacaatttttggga 189565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 30004689 - 30004764
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||||| ||||||||| || |||||| | ||| |||||||| ||||| ||||| ||||| || |||||||    
T  30004689 atttgaacaaccgtttggttgacaacttttggaacaactataatttacaaagaaaaagtaggtatgtgaacgaaaa 30004764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 9226481 - 9226396
Alignment:
Q  159 gagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| ||||||||||||| ||||||||| || ||||| || ||  |||||||| ||||| |||||  ||||||||||| |||||    
T  9226481 gagtgttatttgaacaaccaatttggttgacaacttttgtgacaattataatttacaaagaaaaagtaagtatttgcacggaaatc 9226396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 6517900 - 6517836
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagt 224  Q
    ||||| ||||||||||||||||  ||||||| ||||  |||||| |||||||| ||||| |||||    
T  6517900 agtgttatttgaacaaccatttaattgataacttttaagataactataatttacaaagaaaaagt 6517836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 22819832 - 22819745
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  22819832 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 22819745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 17683524 - 17683439
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  17683524 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 17683439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 46405865 - 46405949
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  46405865 gagtgttatttgaacaatcatttggttgataattttttggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 46405949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 13086208 - 13086118
Alignment:
Q  153 tttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||||| |||||||||||| |||| || |||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  13086208 tttgaggagtgttatttgaacaaccgtttgattaataacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 13086118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 26718556 - 26718466
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||||| || ||||||||| ||||| ||||||||||||||||| ||||    
T  26718556 tttttaaggagtgttatttgaataaccatttggttgataatttttgggacaatcataatttacaaagaaaaagttggtatttgcacaaaaa 26718466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 26731184 - 26731094
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||||| || ||||||||| ||||| ||||||||||||||||| ||||    
T  26731184 tttttaaggagtgttatttgaataaccatttggttgataatttttgggacaatcataatttacaaagaaaaagttggtatttgcacaaaaa 26731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 13139329 - 13139246
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  13139329 aggagtgttatttgaacaaccatttggttgataattttt-ggacaactataatttacaaagaaaaagttggtatttgcacgaaaa 13139246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 39344868 - 39344953
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||| ||||| ||| ||||||||||||||||||    
T  39344868 gaggagtgttatttgaacaaccatttggttgataacttttgagacaatcataatttacaaagaaaaaattggtatttgcacgaaaa 39344953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 45143562 - 45143646
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| ||| ||||||||||| |||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  45143562 aggattgttatttgaacaactatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 45143646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 45152331 - 45152415
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| ||| ||||||||||| |||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  45152331 aggattgttatttgaacaactatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 45152415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 47099204 - 47099120
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaa 239  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||  || |||||||||||||    
T  47099204 tgaggagtgttatttgaacaaccatttggttgataacttttgggacaaccataatttacaaagaaaatattagtatttgcacgaa 47099120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 14010001 - 14010091
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| ||||||||| ||||||| ||  |||||||||| || |||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  14010001 ttttagaggagtgttatttgaataattatttggttgacaacttttgggacaaccataatttataaagaaaaaattggtatttgcacgaaaa 14010091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 31657829 - 31657744
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||| |||||| ||||| | ||| ||||||||||||| ||||||||    
T  31657829 gaggagtgttatttaaacaaccatttggttgacaatttttgggacaaccatcatttacatagaaaaagttggtatttacacgaaaa 31657744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 43769900 - 43769808
Alignment:
Q  150 ttttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaat 242  Q
    |||| |||||||||| ||||||||||| |||| |||||||| || || || |||||||||||| ||||| ||||| |||||||||||||||||    
T  43769900 ttttctgaggagtgttatttgaacaactattttgttgataacttatgcgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaat 43769808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 38338810 - 38338897
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||| | ||| |||||| ||||||||||||||||||||| | |||||||||||||||||| ||| | ||||||||||| ||||||    
T  38338810 gaggagtattattcgaacaatcatttggttgataatttttggaacaaccataatttataaagaaaaaataggtatttgcacaaaaatc 38338897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 2999295 - 2999210
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||  |||| || |||| ||| |||||||||||| ||||| |||||||||||||||| |||||    
T  2999295 gaggagtgttatttgaacaaccatttaattgacaacttttaggacaaccataatttacaaagaaaaagttggtatttgcatgaaaa 2999210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 9362566 - 9362654
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||||| ||| |||||||| ||||| || ||||||| |||||||||| ||||| |||||||||||| |||||    
T  9362566 gaggagtgttatttgaacaaccaatttagttgataacttttgtgacaaccatagtttataaagaaaaagtaggtatttgcacggaaatc 9362654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 52846117 - 52846202
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||| |||| ||||||||||| ||||| |||| ||||||| ||| || ||||||||| ||||| |||||| |||||||||||||||    
T  52846117 gaggggtgttatttgaacaactatttgattgacaatttttaggacaatcataatttacaaagaaaaagtttgtatttgcacgaaaa 52846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 12139036 - 12138949
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||| ||||||||||||||||| ||||||| || ||  | |||||||||||| ||||| ||||| ||||||||||| ||||||    
T  12139036 gaggaatgttatttgaacaaccatttgattgataacttatgtaacaaccataatttacaaagaaaaagtaggtatttgcacaaaaatc 12138949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 18882867 - 18882950
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| |||||||||||||||||||||| || |||||| | || ||||||||| ||||| ||| | |||||||| |||||||||    
T  18882867 agtgttatttgaacaaccatttggttgacaacttttggaaaaatcataatttacaaagaaaaaataggtatttgtacgaaaatc 18882950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 21172460 - 21172395
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagt 224  Q
    |||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||| ||||| |||||    
T  21172460 gagtgttatttgaacaactatttagttgataatttatgggataatcataatttacaaagaaaaagt 21172395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 56271539 - 56271458
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||||||||| ||||||| |||| || ||||  || |||||||||||| ||||| ||||| ||||||||||||||||    
T  56271539 agtgttatttgaacatccatttgtttgacaacttttatgacaaccataatttacaaagaaaaagtaggtatttgcacgaaaa 56271458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 1815889 - 1815976
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||| ||||||| || || || || | |||||||||| ||||| ||||| | ||||||||| ||||||    
T  1815889 gaggagtgttatttgaacaaccatctggttgacaacttatgtgacagccataatttacaaagaaaaagtggatatttgcacaaaaatc 1815976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 49896563 - 49896641
Alignment:
Q  165 catttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||||||||||||| || || |  || || |||||||||||| ||||| ||||||||||||  ||||||||||    
T  49896563 catttgaacaaccatttggtggacaactcatgagacaaccataatttacaaagaaaaagttggtattgacacgaaaatc 49896641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 53654637 - 53654723
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||| ||||| |||| |||||||||| ||||| |||||||||||| ||||| | ||| |||| |||||| ||||    
T  53654637 gaggagtgttatttgaataaccaatttgattgataatttatgggacaaccataatttacaaagaaatagtaggtagttgcacaaaaa 53654723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 12799897 - 12799810
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||| |||||||||||||||||||| | || || || || || ||||||||| ||||| ||| | ||||||| ||||||||||    
T  12799897 gaggaatgttatttgaacaaccatttggttaacaacttatgtgacaatcataatttacaaagaaaaaataggtatttacacgaaaatc 12799810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 32696364 - 32696277
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||| ||||||||||||| ||||| || || ||  |||| |||||||||||| ||||| ||||| | |||| |||||||||||    
T  32696364 gaggaatgttatttgaacaaccaattggtggacaacttaagggacaaccataatttacaaagaaaaagtagatattggcacgaaaatc 32696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 20760429 - 20760383
Alignment:
Q  166 atttgaacaaccatttggttgataat-ttttgggataaccataattt 211  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||    
T  20760429 atttgaacaaccatttgattgataattttttgggacaaccataattt 20760383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 20766820 - 20766774
Alignment:
Q  166 atttgaacaaccatttggttgataat-ttttgggataaccataattt 211  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||    
T  20766820 atttgaacaaccatttgattgataattttttgggacaaccataattt 20766774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 42491252 - 42491202
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    |||| ||||||||||||||||| |||| || |||||||| |||||||||||    
T  42491252 gtgttatttgaacaaccatttgattgacaacttttgggacaaccataattt 42491202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 50831648 - 50831698
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    |||| ||||||||||||||||| |||| || |||||||| |||||||||||    
T  50831648 gtgttatttgaacaaccatttgattgacaacttttgggacaaccataattt 50831698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 12595523 - 12595580
Alignment:
Q  161 gtgtcatttgaacaaccatttggttgataatttttgggataaccat-aatttataaag 217  Q
    |||| |||||||||||||||| | ||| ||||||||||| |||||| |||||||||||    
T  12595523 gtgttatttgaacaaccattttgatgacaatttttgggacaaccataaatttataaag 12595580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 39312504 - 39312589
Alignment:
Q  157 aggagtgtcatttgaacaacc-atttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| |||||||| ||| ||||| |||| | ||| ||  | |||||||||||||||||| ||| | ||||||||||||||||    
T  39312504 aggagtgttatttgaaccacctatttgcttgacattttatgtaacaaccataatttataaagaaaaaataggtatttgcacgaaaa 39312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 27326685 - 27326725
Alignment:
Q  201 aaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| ||||| ||||| ||||||||||||||||||||||    
T  27326685 aaccatcatttacaaagaaaaagttggtatttgcacgaaaa 27326725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 40609798 - 40609742
Alignment:
Q  156 gaggagtgtcatttgaacaacc-atttggttgataatttttgggataaccataattt 211  Q
    ||||||||| |||||||||||| |||||||||| || ||||| || |||||||||||    
T  40609798 gaggagtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataattt 40609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 754326 - 754411
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  754326 gaggagtgttatttgaacaaccatttggttgacaatttttggaacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 754411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 1369540 - 1369456
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| |||||||||||||||||||||| |||||||| || |||||||||||| ||||| ||||||||||||||||||||||||    
T  1369540 gagtgttatttgaacaaccatttggttgacaatttttgagacaaccataatttacaaagaaaaagttggtatttgcacgaaaatc 1369456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 13143269 - 13143357
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| |||||| |||||||||||||||||    
T  13143269 tgaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagtttgtatttgcacgaaaatc 13143357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 35213449 - 35213534
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| || ||||||||| ||||| ||||||||||||||||||||||    
T  35213449 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaatcataatttacaaagaaaaagttggtatttgcacgaaaa 35213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 6531068 - 6531155
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||| |||||||||||| ||||| |||||  |||||||||||||||||    
T  6531068 gaggagtgttatttgaacaaccatttggttgataactaatgggacaaccataatttacaaagaaaaagtatgtatttgcacgaaaatc 6531155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 18141189 - 18141276
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || ||||| || |||||||||||| |||||  |||||||||| ||||||||||||    
T  18141189 gaggagtgttatttgaacaaccatttggttgacaacttttgtgacaaccataatttacaaagaataagttggtatgtgcacgaaaatc 18141276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 32459404 - 32459489
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||| ||||| |||| || |||| ||| |||||||||||| ||||| ||||||||||||||||||||||    
T  32459404 gaggagtgttatttgaacaacaatttgattgacaacttttaggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 32459489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 32046877 - 32046801
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcac 236  Q
    ||||| |||||||||||||||||||||| || || ||||| |||||||||||||||||| ||||||| |||||||||    
T  32046877 agtgttatttgaacaaccatttggttgacaacttatgggacaaccataatttataaagaaaaagttgttatttgcac 32046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 3832648 - 3832562
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaa 240  Q
    ||||||||||| ||||||||||||||||| |||| || || ||||| |||||||||||| ||||| | ||||| |||||||| ||||    
T  3832648 ttgaggagtgttatttgaacaaccatttgattgacaacttatgggacaaccataatttacaaagaaagagttgttatttgcatgaaa 3832562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 20822761 - 20822841
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||  ||||||||||||||||||    
T  20822761 agtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaa-aaaatattggtatttgcacgaaaa 20822841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 5028164 - 5028239
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||||||| || || || |||||||||||||||||| ||||| | ||||| ||||||||    
T  5028164 atttgaacaatcatttggttgataacttatgagacaaccataatttataaagaaaaagtagatatttacacgaaaa 5028239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 2688951 - 2689033
Alignment:
Q  155 tgaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcac 236  Q
    |||||| ||| |||||||||| || ||||||||| || ||||| || |||||||||||||||||| ||||| |||||||||||    
T  2688951 tgaggaatgttatttgaacaatcaatttggttgacaacttttgtgacaaccataatttataaagaaaaagtaggtatttgcac 2689033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 868838 - 868917
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    ||||||||||| |||||||||||||||||||||| |  ||    ||||||||||||||| ||||| |||||  |||||||    
T  868838 ttgaggagtgttatttgaacaaccatttggttgacaccttacatgataaccataatttacaaagaaaaagtaagtatttg 868917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 2943607 - 2943532
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||||||||||||| | ||||| |   | ||||||| |||||||||| ||||| | ||||||||||||||    
T  2943607 atttgaacaaccatttggttaacaatttataaaacaaccatattttataaagaaaaagtagatatttgcacgaaaa 2943532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 23628545 - 23628482
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaaga 218  Q
    ||||||||| |||| |||||||| ||||||||| |||||||  || ||||||||||||||||||    
T  23628545 gaggagtgttatttaaacaaccaatttggttgacaatttttatgacaaccataatttataaaga 23628482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 6856061 - 6856139
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccata-atttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||||||||||||||||| ||||| || || || |||| ||||||||||| ||| | |||||| ||| |||||||    
T  6856061 atttgaacaaccatttggttgacaatttatgagacaaacatagatttataaagaaaaaataggtattggcaagaaaatc 6856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 31883201 - 31883246
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    ||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  31883201 atttgaacaactatttgattgacaatttttgggacaaccataattt 31883246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 30621913 - 30621837
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccata-atttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||||||| ||||||| || ||| ||||||||| ||||| ||||| ||||| | ||||  ||||||||    
T  30621913 atttgaacaaccatttgattgataacttatggaataaccatatatttacaaagaaaaagtagatattgacacgaaaa 30621837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 32870009 - 32869924
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||    
T  32870009 gaggagtgttatttgaacaaccatttggttgacaatttttgggacaaccataatttacaaagaaaaaattggtatttgcacgaaaa 32869924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 13765583 - 13765498
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||| | ||||||||||||||||||||||    
T  13765583 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaataaaaagttggtatttgcacgaaaa 13765498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 15270044 - 15269957
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||| ||||||||||||||| ||||  ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  15270044 gaggagtgttatttgaacatccatttggttgataacttttatgataaccataatttacaaagaaaaagtaggtatttgcacgaaaatc 15269957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 35589274 - 35589360
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||| |||||| |||| ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  35589274 tgaggagtgttatttaaacaactatttagttgataatttttgggacaaccataatttacaaagaaaaagttgatatttgcacgaaaa 35589360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 6170813 - 6170728
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||| | ||| ||||||||||||||||||    
T  6170813 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaaaaaaaaattggtatttgcacgaaaa 6170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 6998956 - 6999041
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||| ||||||||||||||||| || |||| ||| |||||||||||||||||| ||| ||||||||||||||||||    
T  6998956 gaggagtgttatttaaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaaattggtatttgcacgaaaa 6999041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 24562905 - 24562990
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| || |||||||||| ||||||||    
T  24562905 gaggagtgttatttgaacaaccatttggttgacaacttttaggacaaccataatttataaagaaaaggttggtatttacacgaaaa 24562990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 39449447 - 39449363
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| |||| |||||||||||| |||| ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||    
T  39449447 gagtgttatttaaacaaccatttgattgacaatttttggaacaaccatcatttataaagaaaaagttggtatttgcacgaaaatc 39449363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 39213656 - 39213743
Alignment:
Q  154 ttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||| |||| |||||||||||| |||| || |||||||| |||||| ||||| ||||| ||||||||||||||||||||||    
T  39213656 ttgaggagtgttatttaaacaaccatttgattgacaacttttgggacaaccatcatttacaaagaaaaagttggtatttgcacgaaaa 39213743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 2563884 - 2563802
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| |||||||||| ||||||||||| || |||| ||| || ||||||||||||||| ||||||||||||||||||||||    
T  2563884 gagtgttatttgaacaatcatttggttgacaacttttaggacaatcataatttataaagaaaaagttggtatttgcacgaaaa 2563802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 3012740 - 3012826
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaat 242  Q
    ||||||||| |||||||||||||||||||||| || || ||||| ||||||||||| |||||| ||||| ||||||||||| |||||    
T  3012740 gaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataatttttaaagaaaaagtaggtatttgcacaaaaat 3012826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 23352795 - 23352880
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || || ||||| |||||||||||| ||||| |||||  |||||||||||||||    
T  23352795 gaggagtgttatttgaacaaccatttggttgacaacttatgggacaaccataatttacaaagaaaaagtatgtatttgcacgaaaa 23352880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 22525887 - 22525971
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| ||||||||||||||||| ||||||| ||||| || |||||||||||| ||||| ||||| || |||||||||||||||    
T  22525887 gagtgttatttgaacaaccatttgattgataacttttgagacaaccataatttacaaagaaaaagtaggcatttgcacgaaaatc 22525971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 37105820 - 37105736
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| ||||||||||| |||||||||| || ||||| || |||||||||||| ||||| ||||||||||| ||||||||||    
T  37105820 aggagtgttatttgaacaactatttggttgacaacttttgtgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaa 37105736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 13347705 - 13347788
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagaca-aagttggtatttgcacgaaaa 241  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||| | | ||||||||| |||||||||||    
T  13347705 gagtgttatttgaacaaccatttggttgacaatttttgggacaaccataatttacaaaaaaataagttggtaattgcacgaaaa 13347788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 9634328 - 9634409
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||||| ||||||||||| || |||| | | |||||||||||| ||||| ||||||||||||||||||||||    
T  9634328 agtgttatttgaacaatcatttggttgacaactttttgaacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 9634409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 7574627 - 7574531
Alignment:
Q  147 atattttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||||  ||| ||||| |||||||||||||||||||||| ||||||||| | ||| |||||||| || || ||| | ||||||||||||||||||    
T  7574627 atattttaagagaagtgttatttgaacaaccatttggttgacaatttttggaacaactataatttacaaggaaaaaataggtatttgcacgaaaatc 7574531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 36211951 - 36212035
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| ||||||||||||||||||||||||| || || || || ||||||||||||||| |||||   ||||||||||||||||    
T  36211951 gagtgttatttgaacaaccatttggttgataaattatgtgacaatcataatttataaagaaaaagtaaatatttgcacgaaaatc 36212035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 2221176 - 2221089
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||  |||| ||||| || || || ||||||||||||||||||||| ||||| |||||||||||| |||||    
T  2221176 gaggagtgttatttgaacaataattttgttgacaacttatgtgataaccataatttataaagaaaaagtaggtatttgcacggaaatc 2221089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 40936952 - 40937039
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||| |||||||| | ||| ||||| || || |||||||||||| ||||| ||||| ||||||||||||||||||    
T  40936952 gaggagtgttatttgaataaccatttagctgacaatttatgtgacaaccataatttacaaagaaaaagtgggtatttgcacgaaaatc 40937039  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 36643972 - 36644034
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaaga 218  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||| |||||    
T  36643972 gaggagtgttatttgaacaaccatttggttgacaatttatgggacaaccataatttacaaaga 36644034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 44254780 - 44254699
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||||||||||||||||| |||| || || |||||||||||||||||| ||||| ||||| | |||||||| |||||    
T  44254780 agtgttatttgaacaaccatttgattgacaacttatgggataaccataatttacaaagaaaaagtagttatttgcaggaaaa 44254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 11091246 - 11091334
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| |||| ||||||||||| |||||||||||||||| || || |||||||||||| || || ||||| ||||||| || |||||||    
T  11091246 tgaggggtgttatttgaacaacaatttggttgataatttatgagacaaccataatttacaaggaaaaagtaggtatttacaagaaaatc 11091334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 10711907 - 10711822
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||| ||||||||||||| |||||  | || ||||||||| ||||| ||| | ||||||| ||||||||    
T  10711907 gaggagtgttatttgaacaactatttggttgataacttttgaaacaatcataatttacaaagaaaaaataggtatttacacgaaaa 10711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 5054796 - 5054704
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||| ||| ||||| ||||||| ||| |||||||||| || || || || ||| |||||||| ||||| ||||| ||||||||||||||||||    
T  5054796 ttttagagaagtgttatttgaataactatttggttgacaacttatgtgacaacaataatttacaaagaaaaagtaggtatttgcacgaaaatc 5054704  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 34119532 - 34119627
Alignment:
Q  148 tattttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||| ||||||||| |||||||||||||||||||||| || || || || |  ||||||||| ||||| |||||  |||||  ||||||||||    
T  34119532 tatttttagaggagtgtaatttgaacaaccatttggttgacaacttatgagacactcataatttacaaagaaaaagtaagtattcacacgaaaatc 34119627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 36517378 - 36517311
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagt 224  Q
    |||||||| ||||||||||| ||||| ||||||| |||||||| || ||||||||| ||||| |||||    
T  36517378 aggagtgttatttgaacaactatttgattgataacttttgggacaatcataatttacaaagaaaaagt 36517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 28245906 - 28245826
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||||||||||||||||| || |||||  | |||| ||||||| ||||| ||| | ||||||||||||||||    
T  28245906 agtgttatttgaacaaccatttggttgacaacttttgaaacaaccttaatttacaaaga-aaaataggtatttgcacgaaaa 28245826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 1836196 - 1836109
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| |||||||| |||||| |||| |||||||| || || || |||||||||||| ||||| ||| | | ||||| ||||||||||    
T  1836196 gaggaatgtcatttaaacaactatttagttgataaattatgagacaaccataatttacaaagaaaaattagatatttacacgaaaatc 1836109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 1415930 - 1415988
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaaga 218  Q
    ||||| ||||||||||  |||| ||||||||||| | ||| ||||||||||||||||||    
T  1415930 agtgttatttgaacaattatttagttgataatttataggacaaccataatttataaaga 1415988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7258443 - 7258517
Alignment:
Q  150 ttttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataa-tttataaagacaaag 223  Q
    |||||||||  |||| ||||||||||||||||| || | ||||||||||| ||| |||| |||||||||| ||||    
T  7258443 ttttttgagttgtgttatttgaacaaccatttgattaacaatttttgggacaactataattttataaagaaaaag 7258517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 4023239 - 4023300
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaaga 218  Q
    |||||||| |||| ||||||||||||||||| ||||| || || || ||||||||| |||||    
T  4023239 aggagtgttatttcaacaaccatttggttgacaatttatgagacaatcataatttacaaaga 4023300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 4061844 - 4061931
Alignment:
Q  150 ttttttgaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    ||||| ||||||||| ||| ||||||| | |||| |||| |||||| | || |||||||||||||||||| |||||  |||||||||||    
T  4061844 tttttagaggagtgttattcgaacaactaatttgattgacaatttt-gtgacaaccataatttataaagaaaaagtatgtatttgcacg 4061931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 17898121 - 17898209
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||| |||| ||||||||| || || | |||||||||||||||| ||||| | ||| | || ||||||| |||||    
T  17898121 gaggagtgttatttgaaccaccaatttggttgacaacttatcggataaccataatttacaaagaaatagtagttagttgcacggaaatc 17898209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 18876854 - 18876890
Alignment:
Q  201 aaccataatttataaagacaaagttggtatttgcacg 237  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18876854 aaccataatttataaagaaaaagtaggtatttgcacg 18876890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 25881726 - 25881642
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| | |||||||||||||||||||||| || |||||  | | |||||||||| ||||| ||| | |||||||  |||||||    
T  25881726 aggagtcttatttgaacaaccatttggttgacaacttttgaaacagccataatttacaaagaaaaaataggtatttatacgaaaa 25881642  T

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Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 42569612 - 42569704
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||| ||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||||||||    
T  42569612 ttttagaggagtattatttgaacaaccatttggttgataatttttaggacaaccataatttataaagaaaaagttgatatttacacgaaaatc 42569704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 16872044 - 16872131
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||||| || |||||||||||||||||||| | || |||||||| |||||||||||| ||||| ||||||| ||||||||||||||||    
T  16872044 gaggagggttatttgaacaaccatttggttaacaacttttgggacaaccataatttacaaagaaaaagttgatatttgcacgaaaatc 16872131  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 31597132 - 31597046
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| ||||||||||||||||| ||||||| ||||| || || ||||||||| ||||| ||||||||||||||||| ||||    
T  31597132 tgaggagtgttatttgaacaaccatttgattgataacttttgagacaatcataatttacaaagaaaaagttggtatttgcacaaaaa 31597046  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 30439394 - 30439481
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||||||||||||||||| || || || |||||||||||| ||||| ||| |  |||||||||||||||||    
T  30439394 gaggagtgttatttgaacaaccatttggttgataacttatgtgacaaccataatttacaaagaaaaaatgagtatttgcacgaaaatc 30439481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 34018992 - 34018907
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaa 240  Q
    |||||||||| |||||| ||||||||||||| | || ||| |||| |||||||||||| ||||| |||||||||| ||||||||||    
T  34018992 tgaggagtgttatttgatcaaccatttggttaacaactttcgggacaaccataatttacaaagaaaaagttggtaattgcacgaaa 34018907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 36885376 - 36885463
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| ||||||||||||||||||| || || || ||||| |||||||||||| ||||| ||||| ||||||  ||||||||||    
T  36885376 gaggagtgttatttgaacaaccatttggtggacaacttatgggacaaccataatttacaaagaaaaagtaggtattgacacgaaaatc 36885463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 12707333 - 12707247
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaag-acaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||||||||||||  | || ||||| |||||||||||| |||| | ||||||||||||| ||||||||    
T  12707333 gaggagtgttatttgaacaaccatttggttgagcacttatgggacaaccataatttacaaagaaaaaagttggtatttacacgaaaa 12707247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 2733172 - 2733089
Alignment:
Q  155 tgaggagtgtcatttgaacaaccattt-ggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    |||||||||| ||||||||||||| || |||| | |||||||| || || ||||||||||||||| ||||| ||||||||||||    
T  2733172 tgaggagtgttatttgaacaaccaattcggttaacaatttttgtgacaatcataatttataaagaaaaagtaggtatttgcacg 2733089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 9208248 - 9208166
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    ||||||||| ||||||||||||| ||||||||| || ||||| || ||| ||||| |||||||| ||||| ||||||||||||    
T  9208248 gaggagtgttatttgaacaaccaatttggttgacaacttttgtgacaactataatatataaagaaaaagtaggtatttgcacg 9208166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28646856 - 28646770
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||| |||| |||| || || || ||||||||||||||||||||| ||||| | |||||| |||||||    
T  28646856 gaggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataatttataaagaaaaagtagatatttgtacgaaaa 28646770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28651440 - 28651354
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||||| |||| |||| || || || ||||||||||||||||||||| ||||| | |||||| |||||||    
T  28651440 gaggagtgttatttgaacaaccaatttgattgacaacttatgtgataaccataatttataaagaaaaagtagatatttgtacgaaaa 28651354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 7472919 - 7472999
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| ||||||||||| |||||||||| || |||| | |||||||||||||| ||||| ||| | ||||||||||||||||    
T  7472919 agtgttatttgaacaactatttggttgacaacttttagaataaccataatttacaaaga-aaaataggtatttgcacgaaaa 7472999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 45508715 - 45508626
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaa-----gttggtatttgcacgaaaa 241  Q
    |||||||| ||||||||||| |||| ||||||||||| ||||| |||||||||||| ||| | |||     |||||||||||||||||||    
T  45508715 aggagtgttatttgaacaacaatttagttgataatttatgggacaaccataatttacaaaaaaaaaaaaatgttggtatttgcacgaaaa 45508626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 41542029 - 41541955
Alignment:
Q  167 tttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||||||||||| || || ||||| |||||||||||||||| | ||| |  |||||||||| ||||    
T  41542029 tttgaacaaccatttggttgacaacttatgggacaaccataatttataaataaaaaataagtatttgcacaaaaa 41541955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 45519736 - 45519683
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataattta 212  Q
    |||||| |||||||||||||||||||||| ||| | || |||||||||||||||    
T  45519736 gagtgttatttgaacaaccatttggttgacaatgtatgagataaccataattta 45519683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 36568147 - 36568067
Alignment:
Q  153 tttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    |||| ||||||| ||||||||||||||||| |||| || || ||||| |||||||||||| | | | ||||| ||||||||    
T  36568147 tttggggagtgttatttgaacaaccatttgattgacaacttatgggacaaccataatttacacaaaaaaagtaggtatttg 36568067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 3441351 - 3441305
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataattta 212  Q
    ||||||||||| |||| ||||||||||| ||||| ||||||||||||    
T  3441351 atttgaacaactatttagttgataatttatgggacaaccataattta 3441305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 36514449 - 36514507
Alignment:
Q  153 tttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataattt 211  Q
    ||||||| ||||  ||||||||||||||||  ||||||||||||||| |||| ||||||    
T  36514449 tttgaggtgtgttgtttgaacaaccatttgtgtgataatttttgggagaaccgtaattt 36514507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 4658145 - 4658210
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagt 224  Q
    |||||| ||||||||||||||||  |||| || |||| ||| |||||||||||| ||||| |||||    
T  4658145 gagtgttatttgaacaaccatttaattgacaacttttaggacaaccataatttacaaagaaaaagt 4658210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 41701338 - 41701289
Alignment:
Q  167 tttgaacaaccatttggttgataatttttgggataaccataatttataaa 216  Q
    ||||||||||| ||||||||||||||| | ||| || |||||||||||||    
T  41701338 tttgaacaaccgtttggttgataatttattggacaatcataatttataaa 41701289  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 29440410 - 29440498
Alignment:
Q  156 gaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||| || |||| |||| |||||  | || |||||||||||||| ||| |||||  ||||||||||| |||||    
T  29440410 gaggagtgttatttgaacaatcaatttgattgacaatttacgtgacaaccataatttatacagaaaaagtaagtatttgcacggaaatc 29440498  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 36424499 - 36424571
Alignment:
Q  166 atttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacg 237  Q
    ||||||||||| | |||| ||||||| ||||| || |||||||||||||||||| ||| |  |||||||||||    
T  36424499 atttgaacaactaatttgattgataacttttgtgacaaccataatttataaagaaaaaatatgtatttgcacg 36424571  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 42110060 - 42110148
Alignment:
Q  146 aatattttttgaggagtgtcatttgaacaac-catttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    |||||||||| |||||||| |||||||||||  |||||||||| || || || ||  | ||||||||| ||||| |||||| |||||||    
T  42110060 aatatttttttaggagtgttatttgaacaactaatttggttgacaacttatgtgacgatcataatttacaaagaaaaagttagtatttg 42110148  T

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Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28036927 - 28036842
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| | |||||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  28036927 gaggagtgttaattgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaagttggtatttgcacgaaaa 28036842  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 43573431 - 43573516
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||| ||||||||||| |||||||| || |||||||||||||||||| ||| ||||||||||||||||||    
T  43573431 gaggagtgttatttgaacaatcatttggttgacaatttttgagacaaccataatttataaagaaaaaattggtatttgcacgaaaa 43573516  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 11352862 - 11352947
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||| ||| ||||||||| ||||||||    
T  11352862 gaggagtgttatttgaacaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaatttggtatttacacgaaaa 11352947  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 12645788 - 12645885
Alignment:
Q  146 aatattttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||| |||| ||||||||  ||||||||||| |||||||||| || ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  12645788 aataattttagaggagtgatatttgaacaactatttggttgacaacttttgagataaccataatttacaaagaaaaagttgatatttgcacgaaaatc 12645885  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 41894099 - 41894013
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||| |||||||||||||||| ||||| |||||||| || |||||||||||| ||||  ||||||||||| ||||||||||    
T  41894099 tgaggagtgttatttgaacaaccatttagttgacaatttttgtgacaaccataatttacaaaggaaaagttggtatatgcacgaaaa 41894013  T

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Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 13729909 - 13729824
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||| | ||||||||||||||| || |||||||| |||||||||||| ||||| ||| ||||||||||||||||||    
T  13729909 gaggagtgttatttcagcaaccatttggttgacaacttttgggacaaccataatttacaaagaaaaaattggtatttgcacgaaaa 13729824  T

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Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 7817819 - 7817732
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||||||||||||| || || || || |||||||||||| ||||| ||||| | ||||||||||||||||    
T  7817819 gaggagtgttatttgaacaaccatttggttgacaacttatgtgacaaccataatttacaaagaaaaagtggatatttgcacgaaaatc 7817732  T

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Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 34757356 - 34757439
Alignment:
Q  154 ttgaggagtgtcatttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcac 236  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||| || |||||||||||||||||| ||||| |||||||||||    
T  34757356 ttgaggagtgttatttgaacaaccaatttggttgacaacttttgtgacaaccataatttataaagaaaaagtaggtatttgcac 34757439  T

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Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 35588783 - 35588866
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| ||||||||||||||||  ||||||||||||| || ||  |||||||| ||||| ||||||||||||||||||||||||    
T  35588783 agtgttatttgaacaaccatttaattgataatttttgagacaattataatttacaaagaaaaagttggtatttgcacgaaaatc 35588866  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 41458784 - 41458692
Alignment:
Q  151 tttttgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||| ||||||||| |||||||||||||||||||||| || ||    || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  41458784 ttttagaggagtgttatttgaacaaccatttggttgacaacttacatgacaaccataatttataaagaaaaagtaggtatttgcacaaaaatc 41458692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 44184457 - 44184532
Alignment:
Q  166 atttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||||||||||||||||| || |||||| | |||||||||||| ||||| ||| | ||||||||||||||||    
T  44184457 atttgaacaaccatttggttgacaacttttggaacaaccataatttacaaagaaaaaataggtatttgcacgaaaa 44184532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 3343221 - 3343303
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| ||||||||||| ||||| |||| || ||||  || |||||||||||||||||| |||||||| |||||||||||||    
T  3343221 gagtgttatttgaacaactatttgattgacaacttttaagacaaccataatttataaagaaaaagttgggatttgcacgaaaa 3343303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 42555744 - 42555662
Alignment:
Q  159 gagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||| |||||||||||||||||||||| || ||||| || |||||||||||||||||  ||||| || ||||| |||||||    
T  42555744 gagtgttatttgaacaaccatttggttgacaacttttgagacaaccataatttataaaggaaaagtaggcatttgtacgaaaa 42555662  T

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Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 10055521 - 10055597
Alignment:
Q  157 aggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttg 233  Q
    |||||||| |||| ||||||||||||||||| || || ||||| ||| |||||||| ||||| ||||||||||||||    
T  10055521 aggagtgttatttaaacaaccatttggttgacaacttatgggacaactataatttacaaagaaaaagttggtatttg 10055597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 21822486 - 21822574
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    |||| ||||| |||||||||||||||| ||||| || ||||   | |||||||||||| ||||| ||| ||||||||| ||||||||||    
T  21822486 tgagaagtgttatttgaacaaccatttagttgacaacttttaaaacaaccataatttacaaagaaaaaattggtatttacacgaaaatc 21822574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 46532676 - 46532600
Alignment:
Q  166 atttgaacaacca-tttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||| ||||||||| || ||||| || |||||||||||||||||| ||| | ||||||| ||||||||    
T  46532676 atttgaacaaccaatttggttgacaacttttgtgacaaccataatttataaagaaaaattaggtatttacacgaaaa 46532600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 16980468 - 16980394
Alignment:
Q  167 tttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||||||||| ||||| || ||||| || || ||||||||| ||||| ||| ||||||||||| ||||||    
T  16980468 tttgaacaaccatttagttgacaacttttgagacaatcataatttacaaagaaaaaattggtatttgcccgaaaa 16980394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 33180597 - 33180683
Alignment:
Q  155 tgaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| | |||||||||||||||||||||| || || || || ||  |||||||||||||| ||| |  |||||||||||||||    
T  33180597 tgaggagtattatttgaacaaccatttggttgacaacttatgagacaatgataatttataaagagaaattatgtatttgcacgaaaa 33180683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 25067402 - 25067344
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaaga 218  Q
    ||||| |||| ||||||||||||||||| ||||| |  ||||||||||||||| |||||    
T  25067402 agtgttatttaaacaaccatttggttgacaatttatatgataaccataatttacaaaga 25067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 3062509 - 3062428
Alignment:
Q  160 agtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||| |||||||||||||||||||||| || ||    || |||||||||||| ||||| ||| | ||||||||||| ||||    
T  3062509 agtgttatttgaacaaccatttggttgacaacttacatgacaaccataatttacaaagaaaaaataggtatttgcacaaaaa 3062428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 8920577 - 8920642
Alignment:
Q  178 atttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| |||| || ||||| || |||||||||||||||||| || || |||||||||||| |||||    
T  8920577 atttgattgacaacttttgtgacaaccataatttataaagaaaacgtaggtatttgcacggaaatc 8920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 35452464 - 35452548
Alignment:
Q  160 agtgtcatttgaacaaccatt-tggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||| |||||||||| || | ||||||| || || || || |||||||||||||||||| ||||  |||||||||||| |||||    
T  35452464 agtgttatttgaacaatcaatctggttgacaacttgtgtgacaaccataatttataaagaaaaagaaggtatttgcacggaaatc 35452548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 37899093 - 37899125
Alignment:
Q  149 attttttgaggagtgtcatttgaacaaccattt 181  Q
    |||||||||||||||| ||||||||||||||||    
T  37899093 attttttgaggagtgttatttgaacaaccattt 37899125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 12115 - 12030
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| ||||||||||| |||||||||| || ||||| || |||||||||||| ||||| ||||||||||| ||||||||||    
T  12115 gaggagtgttatttgaacaactatttggttgacaacttttgcgacaaccataatttacaaagaaaaagttggtatgtgcacgaaaa 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 38608 - 38523
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    ||||||||| |||||||||||||||| ||||| || |||||||| ||| |||||||| ||||| |||||||||||| |||||||||    
T  38608 gaggagtgttatttgaacaaccatttagttgacaacttttgggacaactataatttacaaagaaaaagttggtattcgcacgaaaa 38523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 11147 - 11060
Alignment:
Q  156 gaggagtgtcatttgaacaaccatttggttgataatttttgggataaccataatttataaagacaaagttggtatttgcacgaaaatc 243  Q
    ||||||||| |||||||||||| ||||||||| || || || || || ||||||||| ||||| ||||| ||||||||||||||||||    
T  11147 gaggagtgttatttgaacaaccttttggttgacaacttatgtgacaatcataatttacaaagaaaaagtgggtatttgcacgaaaatc 11060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 8361 - 8312
Alignment:
Q  192 ttttgggataaccataatttataaagacaaagttggtatttgcacgaaaa 241  Q
    |||||||| |||||| ||||| ||||| ||||||| ||||||||||||||    
T  8361 ttttgggacaaccatcatttacaaagaaaaagttgatatttgcacgaaaa 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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