View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19259_high_3 (Length: 506)

Name: NF19259_high_3
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19259_high_3
NF19259_high_3
[»] chr5 (56 HSPs)
chr5 (19-313)||(1951563-1951836)
chr5 (244-351)||(15808958-15809065)
chr5 (244-351)||(30688007-30688114)
chr5 (244-313)||(3960768-3960837)
chr5 (246-313)||(27005210-27005277)
chr5 (244-311)||(30486097-30486164)
chr5 (244-313)||(4736782-4736851)
chr5 (244-313)||(11448720-11448789)
chr5 (244-313)||(14795679-14795748)
chr5 (244-313)||(17210003-17210072)
chr5 (244-313)||(26905885-26905954)
chr5 (244-293)||(33833204-33833253)
chr5 (244-311)||(7014513-7014580)
chr5 (272-347)||(8318124-8318199)
chr5 (246-313)||(17605031-17605097)
chr5 (244-351)||(33026215-33026322)
chr5 (264-309)||(6260978-6261023)
chr5 (264-309)||(6436573-6436618)
chr5 (264-309)||(17232903-17232948)
chr5 (244-293)||(29302255-29302304)
chr5 (244-351)||(14369752-14369857)
chr5 (264-306)||(858040-858082)
chr5 (244-310)||(1921448-1921513)
chr5 (264-306)||(4083888-4083930)
chr5 (264-306)||(4738082-4738124)
chr5 (264-306)||(32736410-32736452)
chr5 (254-351)||(4083732-4083828)
chr5 (244-351)||(31240336-31240441)
chr5 (244-294)||(4737917-4737966)
chr5 (264-306)||(7944437-7944479)
chr5 (264-306)||(9124854-9124896)
chr5 (244-294)||(12910170-12910219)
chr5 (264-306)||(14369917-14369959)
chr5 (244-294)||(22213126-22213176)
chr5 (264-306)||(28747913-28747955)
chr5 (265-306)||(33696204-33696245)
chr5 (260-301)||(39038666-39038707)
chr5 (254-294)||(2695243-2695283)
chr5 (244-288)||(30667733-30667777)
chr5 (254-294)||(33696047-33696087)
chr5 (264-311)||(1797420-1797467)
chr5 (244-351)||(25912134-25912239)
chr5 (244-294)||(3038872-3038921)
chr5 (264-306)||(17210166-17210207)
chr5 (264-306)||(25912032-25912074)
chr5 (264-302)||(31752266-31752304)
chr5 (264-306)||(33832868-33832910)
chr5 (244-313)||(37468530-37468599)
chr5 (244-278)||(38661209-38661243)
chr5 (264-306)||(39548832-39548874)
chr5 (244-294)||(40234222-40234271)
chr5 (264-301)||(38952339-38952376)
chr5 (244-345)||(39548938-39549037)
chr5 (244-351)||(7944272-7944378)
chr5 (264-312)||(11351802-11351850)
chr5 (264-312)||(22701728-22701776)
[»] chr2 (51 HSPs)
chr2 (266-414)||(43660829-43660977)
chr2 (244-351)||(324991-325098)
chr2 (244-311)||(22302121-22302188)
chr2 (244-351)||(39906373-39906480)
chr2 (244-313)||(7682145-7682214)
chr2 (244-313)||(22711174-22711243)
chr2 (244-313)||(33173495-33173564)
chr2 (244-312)||(30406603-30406671)
chr2 (244-351)||(2586377-2586484)
chr2 (244-351)||(9689479-9689586)
chr2 (244-351)||(44542845-44542952)
chr2 (247-313)||(3769453-3769519)
chr2 (244-313)||(6332417-6332486)
chr2 (244-351)||(4293307-4293414)
chr2 (244-311)||(15554165-15554232)
chr2 (244-311)||(20939853-20939920)
chr2 (244-314)||(8741635-8741705)
chr2 (244-293)||(38986955-38987004)
chr2 (264-356)||(11675089-11675181)
chr2 (247-311)||(39904653-39904717)
chr2 (244-351)||(34082656-34082761)
chr2 (244-311)||(44257454-44257521)
chr2 (264-306)||(16513236-16513278)
chr2 (264-306)||(33739534-33739576)
chr2 (264-306)||(34082554-34082596)
chr2 (264-306)||(37169544-37169586)
chr2 (246-351)||(9690261-9690366)
chr2 (260-313)||(10137254-10137309)
chr2 (264-311)||(1750353-1750400)
chr2 (264-306)||(8386684-8386726)
chr2 (244-294)||(11675298-11675347)
chr2 (268-306)||(13002191-13002229)
chr2 (244-294)||(16513074-16513123)
chr2 (264-306)||(23387292-23387334)
chr2 (270-308)||(29452967-29453005)
chr2 (260-306)||(29511953-29511999)
chr2 (244-294)||(29512075-29512124)
chr2 (264-306)||(42850003-42850045)
chr2 (244-294)||(42850161-42850210)
chr2 (264-306)||(45629724-45629766)
chr2 (244-293)||(23234048-23234097)
chr2 (264-309)||(44288905-44288950)
chr2 (256-351)||(13002033-13002127)
chr2 (264-306)||(768710-768752)
chr2 (264-306)||(1576640-1576682)
chr2 (244-294)||(1750189-1750238)
chr2 (270-344)||(23664698-23664771)
chr2 (264-306)||(41528061-41528103)
chr2 (244-345)||(18370327-18370426)
chr2 (270-306)||(29512248-29512284)
chr2 (254-294)||(37169701-37169741)
[»] chr7 (55 HSPs)
chr7 (244-351)||(24720261-24720368)
chr7 (244-351)||(20516920-20517027)
chr7 (244-311)||(27597020-27597087)
chr7 (244-351)||(45225260-45225367)
chr7 (244-313)||(8048097-8048166)
chr7 (244-313)||(18199568-18199637)
chr7 (247-351)||(45225396-45225500)
chr7 (244-351)||(11327596-11327703)
chr7 (244-313)||(4655045-4655114)
chr7 (244-313)||(14777927-14777996)
chr7 (244-313)||(15230065-15230134)
chr7 (244-313)||(33889082-33889151)
chr7 (244-313)||(43711912-43711981)
chr7 (244-351)||(7437889-7437996)
chr7 (244-311)||(12080699-12080766)
chr7 (244-351)||(38876258-38876365)
chr7 (244-350)||(27811942-27812048)
chr7 (244-313)||(22479207-22479275)
chr7 (264-361)||(28912248-28912345)
chr7 (244-313)||(32577505-32577574)
chr7 (247-351)||(28605445-28605549)
chr7 (244-351)||(938896-939001)
chr7 (246-293)||(14719142-14719188)
chr7 (244-311)||(26380206-26380273)
chr7 (264-306)||(939061-939103)
chr7 (264-306)||(9401644-9401686)
chr7 (264-306)||(15957202-15957244)
chr7 (264-306)||(38796811-38796853)
chr7 (264-309)||(11766287-11766332)
chr7 (264-309)||(38367841-38367886)
chr7 (244-313)||(48454673-48454742)
chr7 (264-344)||(25818651-25818731)
chr7 (244-343)||(27168351-27168448)
chr7 (246-313)||(48193155-48193222)
chr7 (264-306)||(454270-454312)
chr7 (264-306)||(2362916-2362958)
chr7 (264-306)||(2509309-2509351)
chr7 (244-294)||(6559358-6559407)
chr7 (264-306)||(6559520-6559562)
chr7 (264-306)||(19069562-19069604)
chr7 (264-306)||(23740205-23740247)
chr7 (244-294)||(41407343-41407392)
chr7 (244-313)||(1325358-1325427)
chr7 (244-345)||(2936641-2936740)
chr7 (244-345)||(28912083-28912182)
chr7 (244-291)||(34986526-34986572)
chr7 (243-294)||(41037358-41037408)
chr7 (244-294)||(2509466-2509515)
chr7 (264-306)||(6736501-6736543)
chr7 (244-294)||(15957360-15957409)
chr7 (264-298)||(18352311-18352345)
chr7 (244-294)||(38368002-38368051)
chr7 (265-306)||(2633880-2633921)
chr7 (254-294)||(6736657-6736697)
chr7 (254-294)||(18352462-18352502)
[»] scaffold0002 (1 HSPs)
scaffold0002 (244-313)||(452496-452565)
[»] scaffold0074 (1 HSPs)
scaffold0074 (244-311)||(26184-26251)
[»] chr8 (71 HSPs)
chr8 (244-351)||(31071645-31071752)
chr8 (244-311)||(25281082-25281149)
chr8 (246-351)||(9483741-9483846)
chr8 (244-351)||(19971429-19971536)
chr8 (244-351)||(21021277-21021384)
chr8 (244-351)||(21442221-21442327)
chr8 (244-313)||(2178705-2178773)
chr8 (244-313)||(5642518-5642587)
chr8 (244-313)||(5644459-5644528)
chr8 (244-293)||(14826289-14826338)
chr8 (244-335)||(41942964-41943055)
chr8 (260-306)||(184096-184142)
chr8 (244-293)||(3154105-3154154)
chr8 (244-293)||(30578019-30578068)
chr8 (244-351)||(26042940-26043045)
chr8 (244-351)||(32486926-32487031)
chr8 (260-306)||(1201659-1201705)
chr8 (264-306)||(26043105-26043147)
chr8 (264-306)||(26630019-26630061)
chr8 (264-306)||(27545750-27545792)
chr8 (264-306)||(34102990-34103032)
chr8 (264-306)||(42556672-42556714)
chr8 (269-310)||(44873139-44873180)
chr8 (246-294)||(10777121-10777168)
chr8 (264-312)||(30633229-30633277)
chr8 (264-344)||(32068974-32069054)
chr8 (244-351)||(10616383-10616488)
chr8 (267-310)||(29377557-29377600)
chr8 (267-306)||(39922442-39922481)
chr8 (244-294)||(184255-184304)
chr8 (264-306)||(2823766-2823808)
chr8 (264-306)||(7089995-7090037)
chr8 (264-306)||(8258486-8258528)
chr8 (264-306)||(17691205-17691247)
chr8 (244-298)||(23053849-23053902)
chr8 (264-306)||(26868088-26868130)
chr8 (244-294)||(29125709-29125758)
chr8 (244-306)||(29377881-29377942)
chr8 (244-294)||(35550591-35550640)
chr8 (260-306)||(35550752-35550798)
chr8 (244-345)||(27545858-27545957)
chr8 (244-313)||(42556464-42556532)
chr8 (254-294)||(1201817-1201857)
chr8 (260-300)||(10776971-10777011)
chr8 (264-312)||(25123643-25123691)
chr8 (264-312)||(25127853-25127901)
chr8 (244-351)||(3369804-3369908)
chr8 (244-351)||(8258321-8258426)
chr8 (244-311)||(9869574-9869641)
chr8 (264-299)||(13468466-13468501)
chr8 (271-306)||(29126156-29126191)
chr8 (244-294)||(2823601-2823650)
chr8 (264-306)||(3369702-3369744)
chr8 (244-294)||(5946786-5946835)
chr8 (264-306)||(5946951-5946993)
chr8 (264-306)||(9484085-9484127)
chr8 (272-306)||(10616281-10616315)
chr8 (244-294)||(17952629-17952678)
chr8 (244-294)||(23161318-23161367)
chr8 (264-306)||(23544957-23544999)
chr8 (244-294)||(25128019-25128068)
chr8 (264-306)||(30207157-30207199)
chr8 (264-309)||(9413795-9413840)
chr8 (266-311)||(30400528-30400572)
chr8 (269-306)||(36899727-36899764)
chr8 (264-312)||(13290480-13290528)
chr8 (266-306)||(17883956-17883996)
chr8 (254-294)||(30633073-30633113)
chr8 (244-351)||(32069114-32069217)
chr8 (244-292)||(36901237-36901284)
chr8 (254-294)||(44874142-44874182)
[»] chr6 (36 HSPs)
chr6 (244-351)||(4184352-4184459)
chr6 (244-351)||(11100473-11100580)
chr6 (244-311)||(15962870-15962937)
chr6 (244-351)||(31132969-31133076)
chr6 (244-313)||(1370029-1370098)
chr6 (244-311)||(9955928-9955995)
chr6 (244-311)||(27828444-27828511)
chr6 (244-351)||(29646214-29646321)
chr6 (244-345)||(10778042-10778143)
chr6 (244-313)||(10315333-10315403)
chr6 (244-351)||(8171874-8171981)
chr6 (254-301)||(32194221-32194268)
chr6 (264-306)||(14488460-14488502)
chr6 (264-306)||(18102851-18102893)
chr6 (264-306)||(25061815-25061857)
chr6 (244-309)||(11742465-11742529)
chr6 (264-306)||(4838443-4838485)
chr6 (264-306)||(4898435-4898477)
chr6 (264-306)||(21969883-21969925)
chr6 (264-306)||(33730680-33730722)
chr6 (264-313)||(5703834-5703883)
chr6 (244-293)||(15882036-15882085)
chr6 (244-313)||(16599200-16599269)
chr6 (264-313)||(20755486-20755535)
chr6 (264-296)||(3881415-3881447)
chr6 (263-310)||(32889671-32889716)
chr6 (244-351)||(4898537-4898642)
chr6 (243-294)||(15718204-15718254)
chr6 (244-351)||(18102685-18102790)
chr6 (244-351)||(25061652-25061756)
chr6 (244-351)||(33730518-33730623)
chr6 (264-306)||(3437982-3438024)
chr6 (244-294)||(11010063-11010112)
chr6 (244-294)||(21970041-21970090)
chr6 (244-294)||(30525501-30525550)
chr6 (254-294)||(3438140-3438180)
[»] chr3 (58 HSPs)
chr3 (244-313)||(6114775-6114844)
chr3 (244-313)||(21727639-21727708)
chr3 (244-351)||(4043622-4043729)
chr3 (244-351)||(7848521-7848628)
chr3 (244-351)||(47461688-47461795)
chr3 (243-313)||(995160-995230)
chr3 (244-313)||(11460144-11460213)
chr3 (244-313)||(12896631-12896700)
chr3 (244-313)||(21408614-21408683)
chr3 (244-351)||(26158326-26158433)
chr3 (244-351)||(27728185-27728292)
chr3 (244-313)||(6748781-6748850)
chr3 (244-293)||(7521352-7521401)
chr3 (244-293)||(8815326-8815375)
chr3 (244-293)||(17226326-17226375)
chr3 (244-345)||(45059632-45059733)
chr3 (244-351)||(2868257-2868364)
chr3 (244-311)||(6109298-6109365)
chr3 (253-351)||(26152291-26152389)
chr3 (243-351)||(994815-994924)
chr3 (244-313)||(27800458-27800527)
chr3 (244-293)||(37504535-37504584)
chr3 (244-293)||(51148163-51148212)
chr3 (264-312)||(50912989-50913037)
chr3 (246-313)||(48649332-48649399)
chr3 (264-307)||(53467345-53467388)
chr3 (264-306)||(12127696-12127738)
chr3 (264-306)||(13349290-13349332)
chr3 (264-306)||(17605628-17605670)
chr3 (260-306)||(22894542-22894588)
chr3 (264-306)||(50801729-50801771)
chr3 (264-306)||(50874109-50874151)
chr3 (244-313)||(17065720-17065789)
chr3 (259-312)||(32203299-32203352)
chr3 (244-345)||(53581549-53581648)
chr3 (244-351)||(13349125-13349230)
chr3 (244-351)||(31039654-31039759)
chr3 (244-351)||(38797972-38798079)
chr3 (264-306)||(1375992-1376034)
chr3 (244-294)||(3800186-3800235)
chr3 (244-294)||(22894902-22894951)
chr3 (264-306)||(29239589-29239631)
chr3 (264-306)||(33837804-33837846)
chr3 (264-306)||(36824110-36824152)
chr3 (244-313)||(3544282-3544351)
chr3 (244-292)||(17604922-17604969)
chr3 (264-312)||(48765199-48765247)
chr3 (270-309)||(8814939-8814978)
chr3 (270-309)||(8815149-8815188)
chr3 (244-351)||(36823945-36824050)
chr3 (264-306)||(3269525-3269567)
chr3 (264-306)||(3800352-3800394)
chr3 (244-294)||(27317629-27317678)
chr3 (260-306)||(27360146-27360192)
chr3 (264-306)||(31039552-31039594)
chr3 (264-306)||(54244776-54244818)
chr3 (244-288)||(33837973-33838016)
chr3 (254-294)||(48765366-48765406)
[»] chr1 (65 HSPs)
chr1 (247-351)||(39424358-39424462)
chr1 (244-351)||(12864280-12864387)
chr1 (244-313)||(16960410-16960479)
chr1 (244-313)||(27255780-27255849)
chr1 (242-351)||(27389473-27389582)
chr1 (244-351)||(14387490-14387597)
chr1 (244-351)||(14494459-14494566)
chr1 (244-351)||(43236252-43236359)
chr1 (244-313)||(1804976-1805045)
chr1 (244-313)||(13943390-13943459)
chr1 (244-293)||(20411345-20411394)
chr1 (244-313)||(28094419-28094488)
chr1 (244-293)||(32716394-32716443)
chr1 (249-313)||(47130907-47130971)
chr1 (246-293)||(12010512-12010559)
chr1 (244-311)||(36817780-36817847)
chr1 (264-309)||(463003-463048)
chr1 (251-351)||(13385729-13385829)
chr1 (127-179)||(40631217-40631269)
chr1 (244-351)||(463403-463508)
chr1 (244-351)||(27787891-27787996)
chr1 (264-306)||(3977960-3978002)
chr1 (264-306)||(10558200-10558242)
chr1 (264-306)||(10764764-10764806)
chr1 (264-306)||(16073426-16073468)
chr1 (264-306)||(20201688-20201730)
chr1 (244-294)||(23413637-23413686)
chr1 (264-306)||(26842986-26843028)
chr1 (264-306)||(28704515-28704557)
chr1 (244-294)||(47130855-47130905)
chr1 (244-293)||(10764596-10764645)
chr1 (244-345)||(13157656-13157755)
chr1 (244-313)||(32374528-32374596)
chr1 (244-313)||(51465010-51465079)
chr1 (264-312)||(14387237-14387285)
chr1 (264-356)||(23413800-23413892)
chr1 (244-351)||(13264531-13264636)
chr1 (267-306)||(16005733-16005772)
chr1 (244-351)||(26843088-26843193)
chr1 (261-312)||(42200015-42200066)
chr1 (261-312)||(42208883-42208934)
chr1 (264-306)||(158402-158444)
chr1 (264-306)||(3273498-3273540)
chr1 (260-306)||(5491590-5491636)
chr1 (264-306)||(6192412-6192454)
chr1 (264-306)||(13157269-13157311)
chr1 (264-306)||(28454870-28454912)
chr1 (264-306)||(28764537-28764579)
chr1 (244-294)||(34515277-34515326)
chr1 (254-351)||(16005573-16005669)
chr1 (272-309)||(27787830-27787867)
chr1 (244-309)||(42199853-42199916)
chr1 (244-309)||(42208721-42208784)
chr1 (254-294)||(6192572-6192612)
chr1 (254-294)||(34306590-34306630)
chr1 (263-306)||(13264750-13264793)
chr1 (264-359)||(51432012-51432107)
chr1 (264-306)||(13157545-13157587)
chr1 (264-306)||(34515117-34515159)
chr1 (264-306)||(45818946-45818988)
chr1 (264-309)||(33676179-33676224)
chr1 (270-306)||(24770619-24770655)
chr1 (270-306)||(32379607-32379643)
chr1 (254-294)||(33675830-33675870)
chr1 (264-296)||(50559248-50559280)
[»] scaffold0068 (1 HSPs)
scaffold0068 (244-351)||(57893-58000)
[»] chr4 (65 HSPs)
chr4 (244-311)||(578891-578958)
chr4 (244-351)||(6214002-6214109)
chr4 (244-351)||(42808003-42808110)
chr4 (244-351)||(48560017-48560124)
chr4 (244-313)||(7630076-7630145)
chr4 (244-351)||(12584378-12584485)
chr4 (244-311)||(14203002-14203069)
chr4 (244-351)||(17180969-17181076)
chr4 (244-351)||(34683140-34683247)
chr4 (246-312)||(51784101-51784167)
chr4 (244-293)||(5157017-5157066)
chr4 (244-313)||(10981431-10981500)
chr4 (244-313)||(17745167-17745236)
chr4 (244-313)||(18470276-18470345)
chr4 (244-293)||(30820639-30820688)
chr4 (247-351)||(13211837-13211941)
chr4 (246-310)||(50182196-50182260)
chr4 (244-351)||(49970614-49970721)
chr4 (244-313)||(5046770-5046839)
chr4 (260-309)||(26335904-26335953)
chr4 (264-356)||(142786-142878)
chr4 (247-311)||(41172432-41172496)
chr4 (244-311)||(13621117-13621184)
chr4 (244-351)||(13621406-13621513)
chr4 (244-351)||(21519750-21519857)
chr4 (264-306)||(6192957-6192999)
chr4 (264-306)||(23383928-23383970)
chr4 (245-311)||(47382181-47382247)
chr4 (264-306)||(49425762-49425804)
chr4 (264-306)||(49606163-49606205)
chr4 (244-294)||(52437586-52437635)
chr4 (244-313)||(17377512-17377581)
chr4 (264-312)||(38425648-38425696)
chr4 (244-351)||(26335743-26335848)
chr4 (246-293)||(30258349-30258396)
chr4 (264-306)||(11777498-11777540)
chr4 (244-294)||(26958558-26958607)
chr4 (264-306)||(45875926-45875968)
chr4 (264-306)||(46106841-46106883)
chr4 (264-306)||(52306935-52306977)
chr4 (264-313)||(40496137-40496186)
chr4 (260-312)||(4712821-4712873)
chr4 (264-312)||(38425555-38425603)
chr4 (244-351)||(4712659-4712764)
chr4 (244-343)||(6137499-6137597)
chr4 (244-351)||(6946647-6946752)
chr4 (244-351)||(14862975-14863079)
chr4 (264-306)||(102249-102291)
chr4 (264-306)||(9744134-9744176)
chr4 (264-306)||(14948289-14948331)
chr4 (264-306)||(15725346-15725388)
chr4 (244-294)||(16553427-16553476)
chr4 (264-306)||(16553592-16553634)
chr4 (264-306)||(20458834-20458876)
chr4 (244-294)||(52306770-52306819)
chr4 (258-351)||(9744236-9744328)
chr4 (271-312)||(33811285-33811326)
chr4 (258-299)||(53975200-53975241)
chr4 (264-356)||(54742619-54742711)
chr4 (269-313)||(3818788-3818832)
chr4 (266-306)||(13211542-13211582)
chr4 (254-294)||(40496303-40496343)
chr4 (254-294)||(43638988-43639028)
chr4 (244-288)||(45801823-45801867)
chr4 (270-306)||(54818630-54818666)
[»] scaffold0015 (2 HSPs)
scaffold0015 (244-351)||(9824-9929)
scaffold0015 (267-306)||(9721-9760)
[»] scaffold0627 (2 HSPs)
scaffold0627 (264-306)||(4224-4266)
scaffold0627 (244-294)||(4060-4109)
[»] scaffold0217 (2 HSPs)
scaffold0217 (264-356)||(20558-20650)
scaffold0217 (244-351)||(20711-20816)
[»] scaffold0325 (2 HSPs)
scaffold0325 (244-351)||(6539-6644)
scaffold0325 (272-306)||(6712-6746)
[»] scaffold1808 (2 HSPs)
scaffold1808 (264-306)||(729-771)
scaffold1808 (254-294)||(573-613)
[»] scaffold0418 (2 HSPs)
scaffold0418 (264-313)||(5848-5897)
scaffold0418 (254-294)||(5692-5732)
[»] scaffold1717 (1 HSPs)
scaffold1717 (269-306)||(1369-1406)
[»] scaffold1527 (1 HSPs)
scaffold1527 (269-306)||(1615-1652)
[»] scaffold0193 (1 HSPs)
scaffold0193 (244-293)||(22765-22813)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 5e-88; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 19 - 313
Target Start/End: Complemental strand, 1951836 - 1951563
Alignment:
Q  19 caagctgctcttgttaatattggcactctaggaacaaagcaagatttaataacaaagtaattccttggaagtctgcagcagcttacattacattatttga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||    
T  1951836 caagctgctcttgttaatattggcactctaggaacaaagcaagatttaataacaaagtaattccttggaagtctgcagcagc-----ttacgttatttga 1951742  T
Q  119 aatgtttctctttcaagt---gtagcatagaccctcccaaagataatatcatcaaggaagttttgtggtatccccccactatcaattggaataactaaat 215  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  1951741 aatgtttctctttcaagtgtagtagcatagaccctcccaaagataatatcatcaaggaagttttgtggtat-cccccattatcaattggactaactaaat 1951643  T
Q  216 gtaactgtgacggtgcatgtaactgtgatgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |                  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  1951642 g------------------taactgtgatgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 1951563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 15808958 - 15809065
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  15808958 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattaatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 15809057  T
Q  344 atccctat 351  Q
    || |||||    
T  15809058 atgcctat 15809065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 30688114 - 30688007
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  30688114 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 30688015  T
Q  344 atccctat 351  Q
    || |||||    
T  30688014 atgcctat 30688007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 3960837 - 3960768
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  3960837 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattcatttgctaaaatactcct 3960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 27005277 - 27005210
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||   |||||||||||||||||    
T  27005277 ttttagcaaagctacaccttaaggtctatttaaccactttttagttattcatttgctaaaatactcct 27005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 30486097 - 30486164
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  30486097 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcaattgctaaaatactc 30486164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 4736782 - 4736851
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  4736782 tgttttagcaaagctacatcttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 4736851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 11448720 - 11448789
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||    ||||||||||||||||    
T  11448720 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagatattcacttgctaaaatactcct 11448789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 14795679 - 14795748
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    ||||||||||||||||    
T  14795679 tgttttagcaaagctacaccttaaggtttatttaaccactttttagttattcacttgctaaaatactcct 14795748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 17210072 - 17210003
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||   |||||||||||||||||    
T  17210072 tgttttagcaaagctacaccttagggtgtatttaaccattttttagttattgatttgctaaaatactcct 17210003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 26905885 - 26905954
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||   |||||||||||||||||    
T  26905885 tgttttagcaaagctacaccttagggtgtatttaacaactttttagttattcatttgctaaaatactcct 26905954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 33833253 - 33833204
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33833253 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 33833204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 7014513 - 7014580
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||   |||||||||||||||    
T  7014513 tgttttagcaaagctacaccttagggtgtatttaaccattttttagttattcatttgctaaaatactc 7014580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 8318124 - 8318199
Alignment:
Q  272 tatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatcc 347  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| || |||   |||||||| ||||||||||    
T  8318124 tatttaaccactttttagttatatctttgctaaaatacttcttataaaaaccaagcgggtgtatcatagcaaatcc 8318199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 17605031 - 17605097
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |  ||| ||||||||||||    
T  17605031 ttttagcaaagctacactt-aaggtgtatttaaccactttttagttatttacttgttaaaatactcct 17605097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 33026215 - 33026322
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||  ||| ||||||||||||||||||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  33026215 tgttttagcaaaactacatcttagggtgtatttaaccactttttagttattaatttgctaaaatactccttctaaaaaataagtcggtgtattctagcaa 33026314  T
Q  344 atccctat 351  Q
    || |||||    
T  33026315 atgcctat 33026322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 6261023 - 6260978
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  6261023 ttaaggtgtatttaaccactttttagttatatttttgctaaaatac 6260978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 6436573 - 6436618
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  6436573 ttaaggtgtatttaacaactttttagttatatctttgctaaaatac 6436618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 17232948 - 17232903
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  17232948 ttaaggtgtatttaacaactttttagttatatctttgctaaaatac 17232903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 29302304 - 29302255
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29302304 tgttttagcaaagctacaccttaaggtgtatttaaccaccttttagttat 29302255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 14369752 - 14369857
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  14369752 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaa 14369849  T
Q  344 atccctat 351  Q
    || |||||    
T  14369850 atgcctat 14369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 858040 - 858082
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  858040 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 1921448 - 1921513
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatact 310  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    |||||||||||||    
T  1921448 tgttttagcaa-gctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatact 1921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 4083888 - 4083930
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4083888 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 4083930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 4738082 - 4738124
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4738082 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 4738124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 32736410 - 32736452
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  32736410 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 32736452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 4083732 - 4083828
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctat 351  Q
    |||||||||||||||||||||||||| |||||||||||||| | ||| ||||| || |||  ||| ||| || | |||||||| |||||||| |||||    
T  4083732 aagctacactttaaggtgtatttaactactttttagttataac-ttgttaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctat 4083828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 31240441 - 31240336
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||  |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  31240441 tgttttagcaa-gctacatcttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 31240344  T
Q  344 atccctat 351  Q
    || |||||    
T  31240343 atgcctat 31240336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 4737917 - 4737966
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  4737917 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 4737966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 7944437 - 7944479
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  7944437 ttaaagtgtatttaacaactttttagttatatctttgctaaaa 7944479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 9124854 - 9124896
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  9124854 ttaaggtgtatttaacaaatttttagttatatctttgctaaaa 9124896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 12910219 - 12910170
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  12910219 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 12910170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 14369917 - 14369959
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  14369917 ttaaggtgtagttaacaactttttagttatatctttgctaaaa 14369959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22213176 - 22213126
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||| |||||    
T  22213176 tgttttaacaaagctacaatttagggtgtatttaaccactttttaattata 22213126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 28747913 - 28747955
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  28747913 ttaagatgtatttaacaactttttagttatatctttgctaaaa 28747955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 33696204 - 33696245
Alignment:
Q  265 taaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  33696204 taaggtgtatttaacaactttttagttatatctttgttaaaa 33696245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 39038666 - 39038707
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgc 301  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  39038666 cactttaaggtgtatttaacaactttttagttaaatctttgc 39038707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 2695283 - 2695243
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  2695283 aagctacaccttaaggtgtatttaactactttttagttata 2695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 30667777 - 30667733
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccacttttta 288  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||    
T  30667777 tgttttagcaaagctacacgttaaagtgtatttaatcacttttta 30667733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 33696047 - 33696087
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  33696047 aagctacaccttaaggtgtatttaactactttttagttata 33696087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 1797420 - 1797467
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||    
T  1797420 ttaaggtgtatttaaccactttttagttattcacttgctaaaatactc 1797467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 25912239 - 25912134
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| | ||||| |||||||||||||||  |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  25912239 tgttttagcaa-gttacaccttaaggtgtatttaattactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 25912142  T
Q  344 atccctat 351  Q
    || |||||    
T  25912141 atgcctat 25912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 3038872 - 3038921
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  3038872 tgttttagcaa-gctacaccttaagatgtatttaactactttttagttata 3038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 17210166 - 17210207
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  17210166 ttaaggtgtattta-caactttttagttatatctttgctaaaa 17210207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 25912074 - 25912032
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||||| ||| |||||    
T  25912074 ttaaggtgtatttaacaactttttagttatatcgttgttaaaa 25912032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 31752266 - 31752304
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgct 302  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  31752266 ttaatgtgtatttaacaactttttagttatatctttgct 31752304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 33832868 - 33832910
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  33832868 ttaagatgtatttaacaactttttagttatatttttgctaaaa 33832910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 37468530 - 37468599
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatc-tttgctaaaatactcct 313  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||||||||  ||||  ||||||||||||||||    
T  37468530 tgttttagcaa-gctacaccttagggtgcatttaaccactttttagtgttatcacttgctaaaatactcct 37468599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 38661209 - 38661243
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaa 278  Q
    ||||||||||||||||||| |||||||||||||||    
T  38661209 tgttttagcaaagctacaccttaaggtgtatttaa 38661243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 39548874 - 39548832
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| |||||||| |||||||||||||||||    
T  39548874 ttaagatgtatttaacaactttttaattatatctttgctaaaa 39548832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 40234271 - 40234222
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||||| |||||| |||| ||||||||||| ||||||||||||||    
T  40234271 tgttttagcaaa-ctacaccttaaagtgtatttaactactttttagttata 40234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 38952339 - 38952376
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgc 301  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  38952339 ttaaagtgtatttaacaactttttagttatatctttgc 38952376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 39549037 - 39548938
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||  ||||||| |||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  39549037 tgttttagcaa-gctacatcttaaggtatatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 39548940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 7944272 - 7944378
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaac-cactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagca 342  Q
    ||||||||||| | ||||||||||||||||||||||  |||||||||||||| | ||||||||| || | |  ||| ||| || | |||||||| |||||    
T  7944272 tgttttagcaa-gttacactttaaggtgtatttaacttactttttagttataac-ttgctaaaacacacattctaaaaaataagtgggtgtatcctagca 7944369  T
Q  343 aatccctat 351  Q
    ||| |||||    
T  7944370 aatgcctat 7944378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 11351850 - 11351802
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||| ||  |||||||| ||||||||||||||||| |||||    
T  11351850 ttaaggtgtattcaataactttttaattatatctttgctaaaacactcc 11351802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 22701776 - 22701728
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||| |||||||| || |||||||||||||||||||| ||||| |||||    
T  22701776 ttaaagtgtatttcacaactttttagttatatctttgttaaaacactcc 22701728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 9e-62; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 266 - 414
Target Start/End: Original strand, 43660829 - 43660977
Alignment:
Q  266 aaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtataaatgtcttt 365  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  43660829 aaggtgtatttaaccactttttagttatatctttcctaaaatactcctcataaaaaacaattgggtgtatcttagcaaatccctatatataagtgtcttt 43660928  T
Q  366 ctttgaggaaagaaaatagggacctccgaatacagcggtaataatgttg 414  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43660929 ttttgaggaaagaaaatagggacctcagaatacagcggtaataatgttg 43660977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 325098 - 324991
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||| ||||||||||||  ||| ||| || |||||||||  ||||||    
T  325098 tgttttagcaaagctacaccttatggtgtatttaaccactttttagttattcatttgttaaaatactccttctaaaaaataagttggtgtattctagcaa 324999  T
Q  344 atccctat 351  Q
    || |||||    
T  324998 atgcctat 324991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 22302188 - 22302121
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||    
T  22302188 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttattcacttgctaaaatactc 22302121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 39906480 - 39906373
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  39906480 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 39906381  T
Q  344 atccctat 351  Q
    || |||||    
T  39906380 atgcctat 39906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 7682214 - 7682145
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  7682214 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 7682145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 22711243 - 22711174
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  22711243 tgttttaacaaagctacaccttaaggtgtatttaaccactttttagttatttatttactaaaatactcct 22711174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 33173495 - 33173564
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  33173495 tgttttagcaaagctacacattagggtgtatttaaccactttttagttattcatttgctaaaatactcct 33173564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 30406671 - 30406603
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   ||||||||||||||||    
T  30406671 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattgatttgctaaaatactcc 30406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 2586377 - 2586484
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  2586377 tgttttagcaaagctacaccttagggtgtatttaaccacttttttgttattcatttgctaaaatactccttctaaaaaataagtaggtgtattctagcaa 2586476  T
Q  344 atccctat 351  Q
    || |||||    
T  2586477 atgcctat 2586484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 9689586 - 9689479
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  9689586 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagtaattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 9689487  T
Q  344 atccctat 351  Q
    || |||||    
T  9689486 atgcctat 9689479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 44542845 - 44542952
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||| |  ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  44542845 tgttttagcaaagctacaccttaaggtgtatttaaccactccttagttatttacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 44542944  T
Q  344 atccctat 351  Q
    || |||||    
T  44542945 atgcctat 44542952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 3769453 - 3769519
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  3769453 tttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 3769519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 6332486 - 6332417
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||   |||||||||||||||||    
T  6332486 tgttttagcaaagctacaccttagggtgtatttaactactttttagttattcatttgctaaaatactcct 6332417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 4293414 - 4293307
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||  ||| ||||||||||| ||||||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  4293414 tgttttagcaaagctacatcttagggtgtatttaatcactttttagttattgatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 4293315  T
Q  344 atccctat 351  Q
    || |||||    
T  4293314 atacctat 4293307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 15554232 - 15554165
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||||||   |||||||||||||||    
T  15554232 tgttttagcaaagttacactttaaggtgtatttaataactttttagttattcatttgctaaaatactc 15554165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 20939920 - 20939853
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    ||||||||||||||    
T  20939920 tgttttagcaaagctacaccttaagatgtatttaaccactttttagttattcacttgctaaaatactc 20939853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 8741705 - 8741635
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctc 314  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||    |||||||||||||||||    
T  8741705 tgttttagcaaagctacaccttaaagtatatttaaccactttttagttattcacttgctaaaatactcctc 8741635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 38986955 - 38987004
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  38986955 tgttttagcaaagctacaccttaaggtgtatttaaccaatttttagttat 38987004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 11675181 - 11675089
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtata 356  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||| |  | |||| | | |||||||| ||||||| |||||| ||||    
T  11675181 ttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtatcctagcaaacccctatatata 11675089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 39904653 - 39904717
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    ||||||||||||||    
T  39904653 tttagcaaagctacaccttaaggtgtatttaaccactttttaattattcacttgctaaaatactc 39904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 34082761 - 34082656
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  34082761 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataaatgggtgtatcctagcaa 34082664  T
Q  344 atccctat 351  Q
    || |||||    
T  34082663 atgcctat 34082656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 44257454 - 44257521
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||    ||||||||||||||    
T  44257454 tgttttagcaaagctacaccttaaggtgtattgaaccattttttagttattcacttgctaaaatactc 44257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 16513236 - 16513278
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  16513236 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 16513278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 33739576 - 33739534
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  33739576 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 33739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 34082596 - 34082554
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  34082596 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 34082554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 37169586 - 37169544
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  37169586 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 37169544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 9690366 - 9690261
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaat 345  Q
    ||||| ||||||||||| ||| | ||||||||||||||||||||||||   |||| ||||||||||||  ||| ||| || | |||||||  ||||||||    
T  9690366 ttttaacaaagctacaccttaggatgtatttaaccactttttagttattgatttgttaaaatactccttctaaaaaataagtgggtgtattctagcaaat 9690267  T
Q  346 ccctat 351  Q
     |||||    
T  9690266 gcctat 9690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 10137254 - 10137309
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagtta--tatctttgctaaaatactcct 313  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||    
T  10137254 cactttaatgtgtatttaaccactttttagttatctatcttttctaaaatactcct 10137309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 1750353 - 1750400
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  1750353 ttaaggtgtatttaacaactttttagttatatttttgctaaaacactc 1750400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 8386726 - 8386684
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  8386726 ttaaagtgtatttaacaactttttagttatatctttgctaaaa 8386684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 11675347 - 11675298
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  11675347 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 11675298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 13002191 - 13002229
Alignment:
Q  268 ggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  13002191 ggtgtatttaacaactttttagttatatctttgctaaaa 13002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 16513074 - 16513123
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  16513074 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 16513123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 23387292 - 23387334
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  23387292 ttaaggtgtatttaacaactttttagttatatctttgttaaaa 23387334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 29453005 - 29452967
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaata 308  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  29453005 tgtatttatccactttttagttatatctttgctaaaata 29452967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 29511999 - 29511953
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  29511999 cactttaagatgtatttaacaactttttagttatatctttgttaaaa 29511953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 29512075 - 29512124
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  29512075 tgttttagcaa-gctacaccttaaagtgtatttaaccactttttagttata 29512124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 42850045 - 42850003
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  42850045 ttaagatgtatttaacaactttttagttatatctttgctaaaa 42850003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 42850210 - 42850161
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  42850210 tgttttagcaa-gctacactttagggtgtatttaactactttttagttata 42850161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 45629766 - 45629724
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  45629766 ttaaggtgtatttaacaactttttagttatatctttggtaaaa 45629724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 23234048 - 23234097
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| | | | ||||||||||||||||||||||||    
T  23234048 tgttttagcaaagctacacctcaggatgtatttaaccactttttagttat 23234097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 44288905 - 44288950
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||    
T  44288905 ttaagatgtatttaacaattttttagttatatctttgctaaaatac 44288950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 13002033 - 13002127
Alignment:
Q  256 gctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctat 351  Q
    ||||||| ||| ||||||||||||||||||||||||||  | ||||||||| ||||||  ||| ||| ||   ||||||| ||||||||| |||||    
T  13002033 gctacaccttagggtgtatttaaccactttttagttatcac-ttgctaaaacactccttctaaaaaataagagggtgtattttagcaaatgcctat 13002127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 768710 - 768752
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||    
T  768710 ttaaggtatatttaacaactttttagttatatttttgctaaaa 768752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 1576682 - 1576640
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||    
T  1576682 ttaaggtgtattcaacaactttttagttatatctttactaaaa 1576640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 1750189 - 1750238
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  1750189 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttata 1750238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 23664771 - 23664698
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaa 344  Q
    |||||||||| | |||||| ||||||||||||||||| ||||| ||||| |||| | ||||| |||| |||||||    
T  23664771 tgtatttaacaattttttaattatatctttgctaaaacactccacataa-aaactagttggtatatcctagcaaa 23664698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 41528061 - 41528103
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| |||| |||||    
T  41528061 ttaaggtgtatttaacaactttttagttatatttttgttaaaa 41528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 18370426 - 18370327
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| | ||||| |||||||||||||||| |||||||| ||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  18370426 tgttttagcaa-gttacaccttaaggtgtatttaactactttttaattataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 18370329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 29512248 - 29512284
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| | ||||||||||||||||||||||||    
T  29512248 tgtatttaacaattttttagttatatctttgctaaaa 29512284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 37169741 - 37169701
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  37169741 aagctacaccttagggtgtatttaactactttttagttata 37169701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 24720261 - 24720368
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  24720261 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 24720360  T
Q  344 atccctat 351  Q
    || |||||    
T  24720361 atgcctat 24720368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 20516920 - 20517027
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  20516920 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 20517019  T
Q  344 atccctat 351  Q
    || |||||    
T  20517020 atgcctat 20517027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 27597020 - 27597087
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  27597020 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttatttgctaaaatactc 27597087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 45225260 - 45225367
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  45225260 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattaacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 45225359  T
Q  344 atccctat 351  Q
    || |||||    
T  45225360 atgcctat 45225367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 8048166 - 8048097
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  8048166 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattcatttgctaaaatactcct 8048097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 18199568 - 18199637
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  18199568 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 18199637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 45225396 - 45225500
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatc 346  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||||     
T  45225396 tttagcaaagctacaccttaaggtgtatttaaccactttttagttattaacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 45225495  T
Q  347 cctat 351  Q
    |||||    
T  45225496 cctat 45225500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 11327596 - 11327703
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  11327596 tgttttagcaaagctataccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 11327695  T
Q  344 atccctat 351  Q
    || |||||    
T  11327696 atgcctat 11327703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 4655045 - 4655114
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    ||||||||||||||||    
T  4655045 tgttttagcaaagctacaccttaagatgtatttaaccactttttagttattcacttgctaaaatactcct 4655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 14777927 - 14777996
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||    
T  14777927 tgttttagcaaagctacaccttaaggtgtgtttaaccactttttagttattcacttgctaaaatactcct 14777996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 15230065 - 15230134
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||    
T  15230065 tgttttagcaaagctacaccttaaggtgtgtttaaccactttttagttattcacttgctaaaatactcct 15230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 33889082 - 33889151
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    ||||||||||||||||    
T  33889082 tgttttagcaaagctacaccttaaggtgtatttaacccctttttagttattcacttgctaaaatactcct 33889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 43711912 - 43711981
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||    ||||||||||||||||    
T  43711912 tgttttagcaaaactacactttaaagtgtatttaaccactttttagttattcacttgctaaaatactcct 43711981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 7437996 - 7437889
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||    |||||||||||||| |  ||| ||| |||| |||||||  ||||||    
T  7437996 tgttttagcaaagctacaccttaaggtgggtttaaccactttttagttattcacttgctaaaatactcattctaaaaaataattgggtgtattctagcaa 7437897  T
Q  344 atccctat 351  Q
    || |||||    
T  7437896 atgcctat 7437889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 12080699 - 12080766
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||    
T  12080699 tgttttagcaaagctacaccttaaggtgtgtttaaccactttttagttattcacttgctaaaatactc 12080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 38876365 - 38876258
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  38876365 tgttttaacaaagctacaccttaagatgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 38876266  T
Q  344 atccctat 351  Q
    || |||||    
T  38876265 atgcctat 38876258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 350
Target Start/End: Original strand, 27811942 - 27812048
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||    ||| ||||||||||||  ||| ||| || | |||||||  ||||||    
T  27811942 tgttttagcaaagctacaccttaaggtgtatttaactactttttagttattcacttgttaaaatactccttctaaaaaataagtgggtgtattctagcaa 27812041  T
Q  344 atcccta 350  Q
    || ||||    
T  27812042 atgccta 27812048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 22479207 - 22479275
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||   |||||||||||||||||    
T  22479207 tgttttagcaaagctacactt-agggtgaatttaaccactttttagttattcatttgctaaaatactcct 22479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 28912248 - 28912345
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtataaatgt 361  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||| |  | |||| | | |||||||| ||||||| |||||| |||| ||||    
T  28912248 ttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgtatcctagcaaacccctatatatatatgt 28912345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 32577505 - 32577574
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| | |||||||||| |||||||||||||   |||||||||||||||||    
T  32577505 tgttttagcaaagctacaccttaggatgtatttaacaactttttagttattgatttgctaaaatactcct 32577574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 28605445 - 28605549
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatc 346  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||||     
T  28605445 tttagtaaagctacaccttaaggtgtgtttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaata 28605544  T
Q  347 cctat 351  Q
    |||||    
T  28605545 cctat 28605549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 938896 - 939001
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  938896 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaa 938993  T
Q  344 atccctat 351  Q
    || |||||    
T  938994 atgcctat 939001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 14719188 - 14719142
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14719188 ttttagcaaagctacactt-aaggtgtatttaaccactttttagttat 14719142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 26380273 - 26380206
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||||||||    ||||||||||||||    
T  26380273 tgttttagcaaagttacaccttaagttgtatttaaccactttttagttattcacttgctaaaatactc 26380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 939061 - 939103
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  939061 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 939103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 9401686 - 9401644
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  9401686 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 9401644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 15957244 - 15957202
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  15957244 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 15957202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 38796853 - 38796811
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  38796853 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 38796811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 11766287 - 11766332
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  11766287 ttaaggtgtatttaacaactttttaattatatctttgctaaaatac 11766332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 38367886 - 38367841
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  38367886 ttaaggtgtatttaacaactttttaattatatctttgctaaaatac 38367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 48454742 - 48454673
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||| |    ||||||||||||||||    
T  48454742 tgttttagcaaagctacaccttagggtgcatttaaccactttttagttcttcacttgctaaaatactcct 48454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 25818651 - 25818731
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaa 344  Q
    |||||||||||| ||| |||||||||||||||||||||||||| || ||| |  | |||| | | ||||||||||||||||    
T  25818651 ttaaggtgtattaaacaactttttagttatatctttgctaaaacacaccttaataaaaactagtaggtgtatcttagcaaa 25818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 343
Target Start/End: Complemental strand, 27168448 - 27168351
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | ||||||| |||||||    
T  27168448 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaa 27168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 48193155 - 48193222
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||   |||| ||||||||||||    
T  48193155 ttttagcaaagctacatcttggggtgtatttaaccactttttagttattcatttgttaaaatactcct 48193222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 454270 - 454312
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  454270 ttaaggtgtatttaacaactttttagttatatatttgctaaaa 454312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 2362916 - 2362958
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  2362916 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 2509351 - 2509309
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  2509351 ttaagatgtatttaacaactttttagttatatctttgctaaaa 2509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 6559358 - 6559407
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  6559358 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 6559407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 6559520 - 6559562
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  6559520 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 6559562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 19069562 - 19069604
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  19069562 ttaaggtgtatttaacaactttttagttatatctttactaaaa 19069604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 23740205 - 23740247
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  23740205 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 23740247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 41407343 - 41407392
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  41407343 tgttttagcaa-gctacacattaaggtgtatttaactactttttagttata 41407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 1325427 - 1325358
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||  |||| ||| ||||||| |||||||||||||    ||||||||||||||||    
T  1325427 tgttttagcaaagctacatcttaacgtgcatttaactactttttagttattcacttgctaaaatactcct 1325358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 2936641 - 2936740
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| | ||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  2936641 tgttttagcaa-gttacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 2936738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 28912083 - 28912182
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||| | |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  28912083 tgttttagcaa-gctacgccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 28912180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 34986526 - 34986572
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagtt 291  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  34986526 tgttttagcaaagttacgcttta-ggtgtatttaaccactttttagtt 34986572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 41037358 - 41037408
Alignment:
Q  243 atgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  41037358 atgttttagcaa-gctacaccttaaggtgcatttaactactttttagttata 41037408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 2509515 - 2509466
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||||||||||    
T  2509515 tgttttagcaa-gctacaccttaaggtacatttaaccactttttagttata 2509466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 6736543 - 6736501
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| ||||| | ||||||||||||||||||||||||    
T  6736543 ttaaggtgtagttaacaattttttagttatatctttgctaaaa 6736501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 15957409 - 15957360
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  15957409 tgttttagcaa-gctacaccttaagatgtatttaactactttttagttata 15957360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 298
Target Start/End: Complemental strand, 18352345 - 18352311
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctt 298  Q
    |||||||||||||||| ||||||||||||||||||    
T  18352345 ttaaggtgtatttaacaactttttagttatatctt 18352311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 38368051 - 38368002
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| | ||||| |||||||||||||||| ||||||||||||||    
T  38368051 tgttttagcaa-gttacaccttaaggtgtatttaactactttttagttata 38368002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 2633921 - 2633880
Alignment:
Q  265 taaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||    
T  2633921 taaggtgtatttaacaactttttcgttatatctatgctaaaa 2633880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 6736697 - 6736657
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||| ||||| ||||||||||||||    
T  6736697 aagctacaccttaaggtgtacttaactactttttagttata 6736657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 18352502 - 18352462
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  18352502 aagctacaccttaaggtgcatttaactactttttagttata 18352462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 452565 - 452496
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  452565 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatatacttgctaaaatactcct 452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 26251 - 26184
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  26251 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttatttgctaaaatactc 26184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 31071752 - 31071645
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||  ||| ||| || |||||||||  ||||||    
T  31071752 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattgatttgctaaaatactccttctaaaaaataagttggtgtattctagcaa 31071653  T
Q  344 atccctat 351  Q
    || |||||    
T  31071652 atgcctat 31071645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 25281149 - 25281082
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||    
T  25281149 tgttttagcaaagctacaccttaaggtgtatttaagcactttttagttatttatttgctaaaatactc 25281082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 351
Target Start/End: Complemental strand, 9483846 - 9483741
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaat 345  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||||    
T  9483846 ttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaat 9483747  T
Q  346 ccctat 351  Q
     |||||    
T  9483746 gcctat 9483741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 19971429 - 19971536
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  19971429 tgttttagcaaagctacaccttagggtgtatttaaccattttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 19971528  T
Q  344 atccctat 351  Q
    || |||||    
T  19971529 atgcctat 19971536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 21021384 - 21021277
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  21021384 tgttttagcaaagctacaccttagggtgtatttaaccattttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 21021285  T
Q  344 atccctat 351  Q
    || |||||    
T  21021284 atgcctat 21021277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 21442327 - 21442221
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||||||  ||||||||  ||||||    
T  21442327 tgttttagcaaatctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaacaa-gtggtgtattctagcaa 21442229  T
Q  344 atccctat 351  Q
    || |||||    
T  21442228 atgcctat 21442221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 2178705 - 2178773
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  2178705 tgttttagcaaacctacactt-aaggtgtatttaaccactttttagttattcatttgctaaaatactcct 2178773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 5642518 - 5642587
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||    
T  5642518 tgttctagcaaagctacactttaaggtgtatttaaccactttttaattattcacttgctaaaatactcct 5642587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 5644459 - 5644528
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||||||||    
T  5644459 tgttctagcaaagctacactttaaggtgtatttaaccactttttaattattcacttgctaaaatactcct 5644528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 14826289 - 14826338
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14826289 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 14826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 41943055 - 41942964
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtat 335  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||    ||||||||||||||||| ||| ||| || | |||||||    
T  41943055 tgttttagcaaagttacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactcctcctaaaaaataagtgggtgtat 41942964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 184142 - 184096
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  184142 cactttaaggtgtatttaacaactttttagttatatctttgctaaaa 184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 3154105 - 3154154
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3154105 tgttttagcaaaactacaccttaaggtgtatttaaccactttttagttat 3154154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 30578068 - 30578019
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30578068 tgttttagcaaagctacaccttatggtgtatttaaccactttttagttat 30578019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 26042940 - 26043045
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  26042940 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaa 26043037  T
Q  344 atccctat 351  Q
    || |||||    
T  26043038 atgcctat 26043045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 32486926 - 32487031
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||| | |||||||||||| | |  ||| ||| || | |||||||| ||||||    
T  32486926 tgttttagcaa-gctgcactttaaggtgtatttaactactttttagttataac-ttgctaaaatacactttctaaaaaataagtgggtgtatcctagcaa 32487023  T
Q  344 atccctat 351  Q
    || |||||    
T  32487024 atgcctat 32487031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 1201705 - 1201659
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||    
T  1201705 cactttaaggtgtattttacaactttttagttatatctttgctaaaa 1201659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 26043105 - 26043147
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  26043105 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 26043147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 26630061 - 26630019
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  26630061 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 26630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 27545792 - 27545750
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  27545792 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 27545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 34103032 - 34102990
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  34103032 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 34102990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 42556714 - 42556672
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  42556714 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 42556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 44873139 - 44873180
Alignment:
Q  269 gtgtatttaaccactttttagttatatctttgctaaaatact 310  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  44873139 gtgtatttaactactttttagttatatctttgctaaaatact 44873180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 10777168 - 10777121
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  10777168 ttttagcaaa-ctacactttaaggtgtatttaactactttttagttata 10777121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 30633229 - 30633277
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  30633229 ttaaggtgtatttaacaactttttagttatatttttgctaaaacactcc 30633277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 32069054 - 32068974
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaa 344  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || ||| |  | |||| | |||||||||| |||||||    
T  32069054 ttaaggtttatttaacaactttttagttatatctttgctaaaacacaccttaataaaaactagttggtgtatcctagcaaa 32068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 10616488 - 10616383
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||| |||||||||||||||| | |||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  10616488 tgttttagcaaa-ctacaccttaaggtgtatttaactattttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 10616391  T
Q  344 atccctat 351  Q
    || |||||    
T  10616390 atgcctat 10616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 29377600 - 29377557
Alignment:
Q  267 aggtgtatttaaccactttttagttatatctttgctaaaatact 310  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  29377600 aggtgtatttaaccactttttaattatatttttgctaaaatact 29377557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 39922442 - 39922481
Alignment:
Q  267 aggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  39922442 aggtgtatttaacaactttttagttatatctttgctaaaa 39922481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 184304 - 184255
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  184304 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 184255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 2823766 - 2823808
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  2823766 ttaagatgtatttaacaactttttagttatatctttgctaaaa 2823808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 7089995 - 7090037
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  7089995 ttaaggtgtatttaacaactttttagttatatcttcgctaaaa 7090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 8258486 - 8258528
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  8258486 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 8258528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 17691247 - 17691205
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  17691247 ttaaggtgtatttaacaactttttagttatatttttgctaaaa 17691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 23053849 - 23053902
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctt 298  Q
    ||||||||||| |||| || |||||||||||||||| ||||||||||||||||||    
T  23053849 tgttttagcaa-gctataccttaaggtgtatttaactactttttagttatatctt 23053902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 26868088 - 26868130
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  26868088 ttaaggtgtatttaacaactttttagttttatctttgctaaaa 26868130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 29125709 - 29125758
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  29125709 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 29125758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 29377881 - 29377942
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| | ||||| |||||||||||||||| |||||| |||||||||||| ||||||    
T  29377881 tgttttagcaa-gttacaccttaaggtgtatttaacaacttttcagttatatctttactaaaa 29377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 35550591 - 35550640
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  35550591 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 35550640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 35550752 - 35550798
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  35550752 cactttaaggtgtatttaacaactttttacttatatctttgttaaaa 35550798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 27545957 - 27545858
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||  |||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  27545957 tgttttagcaat-ctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 27545860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 42556532 - 42556464
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||| | ||||| ||||| ||||||||||||||||||||||||    ||||||||||||||||    
T  42556532 tgttttagcaa-gatacaccttaagatgtatttaaccactttttagttattcacttgctaaaatactcct 42556464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 1201857 - 1201817
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  1201857 aagctacaccttaaggtgtatttaactactttttagttata 1201817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 10777011 - 10776971
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttg 300  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  10777011 cactttaaggtgtatttaacaactttttagttatatatttg 10776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 25123691 - 25123643
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||| ||||||||||| ||||||||||||||||| |||||||| |||||    
T  25123691 ttaaagtgtatttaacaactttttagttatatctatgctaaaacactcc 25123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 25127901 - 25127853
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| |||||||| |||||| |||||||||| |||||    
T  25127901 ttaaggtgtatttaacaactttttaattatatttttgctaaaacactcc 25127853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 3369908 - 3369804
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| ||||||| |||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  3369908 tgttttagcaa-gctacaccttaaggtatatttaactactttttagttataac-ttgctaaaacacaccttttaa-aaataagtgggtgtatcctagcaa 3369812  T
Q  344 atccctat 351  Q
    || |||||    
T  3369811 atgcctat 3369804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 8258321 - 8258426
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||| ||||||  |||||||||| ||| ||  ||| ||| || | |||||||  ||||||    
T  8258321 tgttttagcaa-gctacaccttaaggtgtatttaactactttttggttata-atttgctaaaacacttcttctaaaaaataagtgggtgtattctagcaa 8258418  T
Q  344 atccctat 351  Q
    || |||||    
T  8258419 atgcctat 8258426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 9869574 - 9869641
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||  |||| ||||| | |||||||||||||||||||||||||||| |   |||||||||||||    
T  9869574 tgttttatgaaagatacacgtaaaggtgtatttaaccactttttagttatttacatgctaaaatactc 9869641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 13468466 - 13468501
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatcttt 299  Q
    |||||||||||||||| |||||||||||||||||||    
T  13468466 ttaaggtgtatttaacaactttttagttatatcttt 13468501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 29126156 - 29126191
Alignment:
Q  271 gtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||| ||||||||||||||||||||||||||    
T  29126156 gtatttaacaactttttagttatatctttgctaaaa 29126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 2823601 - 2823650
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| |||| || |||||||||||||||| ||||||||||||||    
T  2823601 tgttttagcaa-gctataccttaaggtgtatttaactactttttagttata 2823650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 3369744 - 3369702
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||    
T  3369744 ttaaggtgtatttaacaactttttagctatatatttgctaaaa 3369702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 5946786 - 5946835
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||||||||    
T  5946786 tgttttagcaa-gctacatcttaaggtgtatttaactactttttagttata 5946835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 5946951 - 5946993
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||    
T  5946951 ttaaggtttatttaacaactttttagttatatatttgctaaaa 5946993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 9484085 - 9484127
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||    
T  9484085 ttaaggtgtatttaacaactttttagttatatatttgccaaaa 9484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 10616315 - 10616281
Alignment:
Q  272 tatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||| ||||||||||||||||||||||||||    
T  10616315 tatttaacaactttttagttatatctttgctaaaa 10616281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 17952629 - 17952678
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||||||||    
T  17952629 tgttttagcaa-gctacattttagggtgtatttaactactttttagttata 17952678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23161318 - 23161367
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||    
T  23161318 tgttttagcaa-gctacaccttaatgtgtatttaactactttttagttata 23161367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 23544957 - 23544999
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  23544957 ttaagatgtatttaacaactttttagttatatcttcgctaaaa 23544999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 25128068 - 25128019
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  25128068 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttata 25128019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 30207199 - 30207157
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||    
T  30207199 ttaaggtgtatttaacaactttttagttatatatttactaaaa 30207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 9413840 - 9413795
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    ||||| |||||||||| | ||||||||||||| |||||||||||||    
T  9413840 ttaagatgtatttaacaattttttagttatatttttgctaaaatac 9413795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 30400572 - 30400528
Alignment:
Q  266 aaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||    
T  30400572 aaggtgtatttaactactttttagttataac-ttgctaaaatactc 30400528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 36899764 - 36899727
Alignment:
Q  269 gtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  36899764 gtgtatttaacaactttttagttatatctttactaaaa 36899727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 13290528 - 13290480
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| |||||||| || ||| |||||||||| |||||    
T  13290528 ttaaggtgtatttaacaactttttaattttatttttgctaaaacactcc 13290480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 17883996 - 17883956
Alignment:
Q  266 aaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| || | ||||||||||||||||||||||||    
T  17883996 aaggtgtattttacaattttttagttatatctttgctaaaa 17883956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 30633073 - 30633113
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  30633073 aagctacaccttaaggtgcatttaactactttttagttata 30633113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 32069217 - 32069114
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| ||  |||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  32069217 tgttttagcaa-gctacaccttaaggtgtatttaactac--tttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 32069122  T
Q  344 atccctat 351  Q
    || |||||    
T  32069121 atgcctat 32069114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 36901284 - 36901237
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagtta 292  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||||||    
T  36901284 tgttttagcaa-gctacatcttaaggtgtatttaactactttttagtta 36901237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 44874142 - 44874182
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||  |||||||||||||||| ||||||||||||||    
T  44874142 aagctacatcttaaggtgtatttaactactttttagttata 44874182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 4184459 - 4184352
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || |||||||||  ||||||    
T  4184459 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaa 4184360  T
Q  344 atccctat 351  Q
    || |||||    
T  4184359 atgcctat 4184352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 11100580 - 11100473
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  11100580 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 11100481  T
Q  344 atccctat 351  Q
    || |||||    
T  11100480 atgcctat 11100473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 15962937 - 15962870
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||    
T  15962937 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatacacttgctaaaatactc 15962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 31133076 - 31132969
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  31133076 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 31132977  T
Q  344 atccctat 351  Q
    || |||||    
T  31132976 atgcctat 31132969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 1370098 - 1370029
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  1370098 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 1370029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 9955995 - 9955928
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||| ||||||||||    
T  9955995 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcatttgttaaaatactc 9955928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 27828511 - 27828444
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  27828511 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactc 27828444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 29646214 - 29646321
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  29646214 tgttttaacaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 29646313  T
Q  344 atccctat 351  Q
    || |||||    
T  29646314 atgcctat 29646321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 10778143 - 10778042
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||    ||||||||||||||||  ||| || ||| | |||||||| ||||||    
T  10778143 tgttttagcaaagctacatcttaaggtgtatttaaacactttttagttattcacttgctaaaatactccttctaaaaaccaagtgggtgtatcctagcaa 10778044  T
Q  344 at 345  Q
    ||    
T  10778043 at 10778042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 10315403 - 10315333
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatc-tttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| |||||||||||| || |||||||||| || |||||||||||||||||    
T  10315403 tgttttagcaaagctacacattagggtgtatttaacaaccttttagttatttcatttgctaaaatactcct 10315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 8171874 - 8171981
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||||||| |  |||  ||||||||||||||| ||||||||| | |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  8171874 tgttttagcaaagctataacttagagtgtatttaaccactgtttagttatttatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 8171973  T
Q  344 atccctat 351  Q
    || |||||    
T  8171974 atgcctat 8171981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 32194221 - 32194268
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttatatctttgc 301  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32194221 aagctacaccttaaggtgtatttaactactttttagttatatctttgc 32194268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 14488460 - 14488502
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  14488460 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 14488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 18102851 - 18102893
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  18102851 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 18102893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 25061815 - 25061857
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  25061815 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 25061857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 11742465 - 11742529
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    ||||||||||||  ||||| ||||  |||||||||| |||||||||||||||||||||||||||||    
T  11742465 tgttttagcaaaa-tacaccttaaaatgtatttaacaactttttagttatatctttgctaaaatac 11742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 4838443 - 4838485
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  4838443 ttaaggtgtatttaacaactttttagttatatctttactaaaa 4838485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 4898477 - 4898435
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  4898477 ttaaagtgtatttaacaactttttagttatatctttgctaaaa 4898435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 21969925 - 21969883
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  21969925 ttaaggtgtatttaacaacattttagttatatctttgctaaaa 21969883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 33730680 - 33730722
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  33730680 ttaaggtgtatttaacaactttttagttatatcttcgctaaaa 33730722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 5703883 - 5703834
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||||||| ||||||||||||||| |||| ||||| ||||||    
T  5703883 ttaaggtgtatttaacaactttttagttatatatttgttaaaaaactcct 5703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 15882085 - 15882036
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||| ||||||||||| ||| | ||||||||||||||||||||||||    
T  15882085 tgttttaacaaagctacaccttatgatgtatttaaccactttttagttat 15882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 16599269 - 16599200
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||| ||||||||||| ||||||||||||||   |||||||||||||    ||||||||||||||||    
T  16599269 tgttttaccaaagctacaccttaaggtgtatttattaactttttagttattcacttgctaaaatactcct 16599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 20755535 - 20755486
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  20755535 ttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 20755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 3881415 - 3881447
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatc 296  Q
    |||||||||||||||||||||||||||||||||    
T  3881415 ttaaggtgtatttaaccactttttagttatatc 3881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 32889716 - 32889671
Alignment:
Q  263 tttaaggtgtatttaaccactttttagttatatctttgctaaaatact 310  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||    
T  32889716 tttaaggtgtatttaaccac--tttagttatatctttgttaaaatact 32889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 4898642 - 4898537
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||  |||||||||||||| | ||||||||| || | |  ||| ||| || | |||||||| ||||||    
T  4898642 tgttttagcaa-gctacaccttaaggtgtatttaattactttttagttataac-ttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaa 4898545  T
Q  344 atccctat 351  Q
    || |||||    
T  4898544 atgcctat 4898537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 15718204 - 15718254
Alignment:
Q  243 atgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  15718204 atgttttagcaa-gctacaccttaaggtgcatttaactactttttagttata 15718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 18102685 - 18102790
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| | |||||||||||||| ||| |||||||||| | |||||||||||| | |  ||| ||| || | |||||||| ||||||    
T  18102685 tgttttagcaa-gctacacctgaaggtgtatttaactactctttagttataac-ttgctaaaatacacattctaaaaaataagtgggtgtatcatagcaa 18102782  T
Q  344 atccctat 351  Q
    || |||||    
T  18102783 atgcctat 18102790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 25061652 - 25061756
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| ||||  |||||||||| |||||||||||||| | ||| ||||| || |||  ||||||| || |||||||||| ||||||    
T  25061652 tgttttagcaa-gctacaccttaaa-tgtatttaactactttttagttataac-ttgttaaaacacaccttctaacaaataagttggtgtatcctagcaa 25061748  T
Q  344 atccctat 351  Q
    || |||||    
T  25061749 atgcctat 25061756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 33730518 - 33730623
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||| ||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||  ||||||    
T  33730518 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaa 33730615  T
Q  344 atccctat 351  Q
    || |||||    
T  33730616 atgcctat 33730623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 3438024 - 3437982
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||| |||||| ||||||||||    
T  3438024 ttaaggtgtatttaacaactttttaattatatatttgctaaaa 3437982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 11010112 - 11010063
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  11010112 tgttttagcaa-gctacaccttaagatgtatttaactactttttagttata 11010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 21970090 - 21970041
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||||||||    
T  21970090 tgttttagcaa-gctacatcttaaggtgtatttaactactttttagttata 21970041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 30525550 - 30525501
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||||||||||    
T  30525550 tgttttagcaa-gctgcaccttaaggtgtatttaactactttttagttata 30525501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 3438180 - 3438140
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| |||||||| |||||    
T  3438180 aagctacaccttaaggtgtatttaactactttttaattata 3438140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 6114775 - 6114844
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  6114775 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttacttgctaaaatactcct 6114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 21727639 - 21727708
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  21727639 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttacttgctaaaatactcct 21727708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 4043622 - 4043729
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || |||||||||  ||||||    
T  4043622 tgttttagcaaatctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaa 4043721  T
Q  344 atccctat 351  Q
    || |||||    
T  4043722 atgcctat 4043729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 7848521 - 7848628
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  7848521 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 7848620  T
Q  344 atccctat 351  Q
    || |||||    
T  7848621 atgcctat 7848628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 47461688 - 47461795
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  47461688 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 47461787  T
Q  344 atccctat 351  Q
    || |||||    
T  47461788 atgcctat 47461795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 995230 - 995160
Alignment:
Q  243 atgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  995230 atgttttagcaaagctacaccttatggtgtatttaaccactttttagttattcatttgctaaaatactcct 995160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 11460144 - 11460213
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  11460144 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 11460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 12896631 - 12896700
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  12896631 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 12896700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 21408683 - 21408614
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  21408683 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 21408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 26158433 - 26158326
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  26158433 tgttttagcaaatctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtaggtgtattctagcaa 26158334  T
Q  344 atccctat 351  Q
    || |||||    
T  26158333 atgcctat 26158326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 27728185 - 27728292
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||| ||||  ||| ||  || | ||||||||| |||||    
T  27728185 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatattccttctaaaaactaagtgggtgtatctaagcaa 27728284  T
Q  344 atccctat 351  Q
    || |||||    
T  27728285 atgcctat 27728292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 6748850 - 6748781
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  6748850 tgttttagcaaagttacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 6748781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 7521352 - 7521401
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7521352 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 7521401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 8815326 - 8815375
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8815326 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 8815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 17226375 - 17226326
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17226375 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 17226326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 45059733 - 45059632
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    |||||||||||||| |  ||| ||| || | |||||||| ||||||    
T  45059733 tgttttagcaaagctacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaa 45059634  T
Q  344 at 345  Q
    ||    
T  45059633 at 45059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 2868364 - 2868257
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||    ||||||||| |||| |  ||| ||| || | |||||||| ||||||    
T  2868364 tgttttagcaaagctacaccttaaggtgtatttaaccactttttatttattcacttgctaaaacactcattctaaaaaataagtgggtgtatcctagcaa 2868265  T
Q  344 atccctat 351  Q
    || |||||    
T  2868264 atgcctat 2868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 6109365 - 6109298
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  6109365 tgttttagcaacgctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactc 6109298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 26152389 - 26152291
Alignment:
Q  253 aaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctat 351  Q
    |||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | ||||||||||| ||||| |||||    
T  26152389 aaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcttaccaaatgcctat 26152291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 994924 - 994815
Alignment:
Q  243 atgttttagcaaagctacactttaag-gtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagc 341  Q
    ||||||||||||||||||||  | || |||||||||||||||||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||    
T  994924 atgttttagcaaagctacacccttagagtgtatttaaccactttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagc 994825  T
Q  342 aaatccctat 351  Q
    |||| |||||    
T  994824 aaatgcctat 994815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 27800458 - 27800527
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  27800458 tgttttagcaaagttacatcttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 27800527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 37504535 - 37504584
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  37504535 tgttttagcaaagctacaccttaaggtgtgtttaaccactttttagttat 37504584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 51148212 - 51148163
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  51148212 tgttttagcaaagctacaccttaagttgtatttaaccactttttagttat 51148163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 50913037 - 50912989
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  50913037 ttaaggtgtatttaacaactttttagttatatttttgctaaaatactcc 50912989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 48649332 - 48649399
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||| |  ||||||||||||||||    
T  48649332 ttttagcaaagctacatcataaggtgtatttgaccactttttagttatttacttgctaaaatactcct 48649399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 53467388 - 53467345
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaat 307  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  53467388 ttaaggtgtatttaacaactttttagttatatctttgctaaaat 53467345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 12127696 - 12127738
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  12127696 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 12127738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 13349290 - 13349332
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  13349290 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 13349332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 17605628 - 17605670
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  17605628 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 17605670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 22894588 - 22894542
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  22894588 cactttaaggtgtatttaacaattttttagttatatctttgctaaaa 22894542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 50801729 - 50801771
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  50801729 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 50801771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 50874151 - 50874109
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  50874151 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 50874109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 17065720 - 17065789
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||  ||  |||||||||||||| |||||||||||   |||||||||||||||||    
T  17065720 tgttttagcaaagctacatcttcgggtgtatttaaccattttttagttattcatttgctaaaatactcct 17065789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 32203299 - 32203352
Alignment:
Q  259 acactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  32203299 acaccttaaggtgtatttaacaattttttagttatatctttgctaaaacactcc 32203352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 53581549 - 53581648
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| ||||| |||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||||||||||    
T  53581549 tgttttagcaa-gctacaccttaagatgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcttagcaa 53581646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 13349125 - 13349230
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||| ||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  13349125 tgttttagcaa-gctccaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacgccttctaaaaaataagtgggtgtatcctagcaa 13349222  T
Q  344 atccctat 351  Q
    || |||||    
T  13349223 atgcctat 13349230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 31039759 - 31039654
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| ||  ||  ||| ||| || | |||||||| ||||||    
T  31039759 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaa 31039662  T
Q  344 atccctat 351  Q
    || |||||    
T  31039661 atgcctat 31039654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 38797972 - 38798079
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||| |||||||| || |||| |||||||||||||||||||||||||    ||| ||||||||||||  ||| ||| || | | ||||| |||||||    
T  38797972 tgttttaacaaagctataccttaatgtgtatttaaccactttttagttattcacttgttaaaatactccttctaaaaaataagtggatgtattttagcaa 38798071  T
Q  344 atccctat 351  Q
    || |||||    
T  38798072 atgcctat 38798079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 1376034 - 1375992
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  1376034 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 1375992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 3800186 - 3800235
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  3800186 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 3800235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22894951 - 22894902
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  22894951 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 22894902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 29239631 - 29239589
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  29239631 ttaaggtgtatttaacagctttttagttatatctttgctaaaa 29239589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 33837846 - 33837804
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  33837846 ttaagatgtatttaacaactttttagttatatctttgctaaaa 33837804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 36824110 - 36824152
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  36824110 ttaaggtgtatttaacaactttttaattatatctttgctaaaa 36824152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 3544282 - 3544351
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||| || |    ||||||||||||||||    
T  3544282 tgttttagtaaagctacaccttagggtgtatttaaccactttttaattcttcacttgctaaaatactcct 3544351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 17604922 - 17604969
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagtta 292  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  17604922 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagtta 17604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 48765247 - 48765199
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||| |||||||||| ||||||||||||||||||| |||||| |||||    
T  48765247 ttaagatgtatttaacaactttttagttatatctttactaaaacactcc 48765199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 8814939 - 8814978
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  8814939 tgtatttaacaattttttagttatatctttgctaaaatac 8814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 8815149 - 8815188
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  8815149 tgtatttaacaattttttagttatatctttgctaaaatac 8815188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 36823945 - 36824050
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||| ||||| | ||||||||| || |||  ||| |||||| ||  |||||  ||||||    
T  36823945 tgttttagcaa-gctacaccttaaggtgtatttaactactttttaattataac-ttgctaaaacacaccttctaaaaaacaagttcttgtattctagcaa 36824042  T
Q  344 atccctat 351  Q
    || |||||    
T  36824043 atgcctat 36824050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 3269525 - 3269567
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||| ||||||||||| |||||    
T  3269525 ttaaggtgtatttaacaactttttaattatatctttgataaaa 3269567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 3800352 - 3800394
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| |||||||||||||||| |||||||||    
T  3800352 ttaagatgtatttaacaactttttagttatatcattgctaaaa 3800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 27317629 - 27317678
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||| ||||||| ||||||||||||||    
T  27317629 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttata 27317678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 27360146 - 27360192
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||||||  |||||||||||||||||||| |||||    
T  27360146 cactctaaggtgtatttaataactttttagttatatctttgttaaaa 27360192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 31039594 - 31039552
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||| ||| | ||||||||||||||||||||||||    
T  31039594 ttaaggtgtattgaacaaatttttagttatatctttgctaaaa 31039552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 54244776 - 54244818
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| |||| |||||    
T  54244776 ttaaggtgtatttaacaactttttagttatatttttgttaaaa 54244818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 33838016 - 33837973
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccacttttta 288  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  33838016 tgttttagcaa-gctacaccttaaggtgtatttaactacttttta 33837973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 48765406 - 48765366
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  48765406 aagctacaccttaaggtgcatttaactactttttagttata 48765366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 351
Target Start/End: Complemental strand, 39424462 - 39424358
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatc 346  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || |||||||||  ||||||||     
T  39424462 tttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatg 39424363  T
Q  347 cctat 351  Q
    |||||    
T  39424362 cctat 39424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 12864280 - 12864387
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  12864280 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttttaaaaaataagtgggtgtattctagcaa 12864379  T
Q  344 atccctat 351  Q
    || |||||    
T  12864380 atgcctat 12864387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 16960479 - 16960410
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  16960479 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 16960410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 27255849 - 27255780
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  || |||||||||||||    
T  27255849 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatttacttcctaaaatactcct 27255780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 351
Target Start/End: Original strand, 27389473 - 27389582
Alignment:
Q  242 gatgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagc 341  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||    
T  27389473 gatgttttagcaaagctacaccttaaggtgtgtttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagc 27389572  T
Q  342 aaatccctat 351  Q
    |||| |||||    
T  27389573 aaatgcctat 27389582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 14387597 - 14387490
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||| |||||||||||  ||| ||| || | |||||||  ||||||    
T  14387597 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgccaaaatactccttctaaaaaataagtgggtgtattctagcaa 14387498  T
Q  344 atccctat 351  Q
    || |||||    
T  14387497 atgcctat 14387490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 14494566 - 14494459
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  14494566 tgttttagcaaagctacaccttaaggtttatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 14494467  T
Q  344 atccctat 351  Q
    || |||||    
T  14494466 atgcctat 14494459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 43236359 - 43236252
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    ||||||||||||| ||  ||| ||| || | |||||||| ||||||    
T  43236359 tgttttagcaaagcaacacattaaggtgtatttaaccactttttagttatccacttgctaaaatacttcttctaaaaaataagtgggtgtatcctagcaa 43236260  T
Q  344 atccctat 351  Q
    || |||||    
T  43236259 atgcctat 43236252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 1804976 - 1805045
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||   |||||||||||||||||    
T  1804976 tgttttagcaaagctacaccttaggatgtatttaaccactttttagttattgatttgctaaaatactcct 1805045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 13943459 - 13943390
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  13943459 tgttttaacaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 13943390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 20411394 - 20411345
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20411394 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 20411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 28094419 - 28094488
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||   ||| |||||||||||||    
T  28094419 tgttttagcaaagctacaccttagggtgtatttaaccactttttagttattcatttactaaaatactcct 28094488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 32716394 - 32716443
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32716394 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 32716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 47130907 - 47130971
Alignment:
Q  249 tagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||    
T  47130907 tagcaaagctacaccttagggtgtatttaaccactttttagttattgatttgctaaaatactcct 47130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 12010512 - 12010559
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12010512 ttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 12010559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 36817847 - 36817780
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||    ||||||||||||||    
T  36817847 tgttttagcaaagctacaccttaaggtgaatttaaccactttttagttattcacttgctaaaatactc 36817780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 463048 - 463003
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  463048 ttaaggtgtatttaacaactttttagttatatctttgctaaaatac 463003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 13385729 - 13385829
Alignment:
Q  251 gcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatcccta 350  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| |||||||| ||||    
T  13385729 gcaaagttacaccttaaggtgtatttaaccactttttagttattcaattgctaaaatactccttctaaaaactaagtgggtgtatcctagcaaatgccta 13385828  T
Q  351 t 351  Q
    |    
T  13385829 t 13385829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 40631217 - 40631269
Alignment:
Q  127 tctttcaagtgtagcatagaccctcccaaagataatatcatcaaggaagtttt 179  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  40631217 tctttcaagtgtaacataaaccctcccaaatataatatcatcaaggaagtttt 40631269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 463508 - 463403
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  463508 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 463411  T
Q  344 atccctat 351  Q
    || |||||    
T  463410 atgcctat 463403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 27787996 - 27787891
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  27787996 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 27787899  T
Q  344 atccctat 351  Q
    || |||||    
T  27787898 attcctat 27787891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 3978002 - 3977960
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3978002 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 3977960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 10558242 - 10558200
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  10558242 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 10558200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 10764764 - 10764806
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  10764764 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 10764806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 16073468 - 16073426
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  16073468 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 16073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 20201730 - 20201688
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  20201730 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 20201688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23413637 - 23413686
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  23413637 tgttttagcaa-gctacaccttaaggtgtatttaaccactttttagttata 23413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 26843028 - 26842986
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  26843028 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 26842986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 28704515 - 28704557
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  28704515 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 28704557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 47130905 - 47130855
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  47130905 tgttttagcaaagctacaccttagggtgtatttaactactttttagttata 47130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 10764596 - 10764645
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  10764596 tgttttaacaaagctacaccttagggtgtatttaaccactttttagttat 10764645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 13157755 - 13157656
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  13157755 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 13157658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 32374528 - 32374596
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  32374528 tgttttagcaa-gttacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 32374596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 51465010 - 51465079
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||| ||||| ||| | |||||||||||| |||||||||||   |||||||||||||||||    
T  51465010 tgttttagcaaagttacaccttaggctgtatttaaccattttttagttattgatttgctaaaatactcct 51465079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 14387285 - 14387237
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  14387285 ttaaggtgtattcaacaactttttagttatatctttgctaaaacactcc 14387237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 23413800 - 23413892
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtata 356  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||| |  | |||| | |||||||||| ||||||| |||||| ||||    
T  23413800 ttaaggtgtatttaacaattttttagttatatatttgctaaaacacaccttaataaaaactagttggtgtatcctagcaaacccctatatata 23413892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 13264531 - 13264636
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||| ||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  13264531 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 13264628  T
Q  344 atccctat 351  Q
    || |||||    
T  13264629 atgcctat 13264636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 16005733 - 16005772
Alignment:
Q  267 aggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  16005733 aggtgtatttaacaactttttagttatatctttgctaaaa 16005772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 26843193 - 26843088
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||  |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  26843193 tgttttagcaa-gctacaacttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 26843096  T
Q  344 atccctat 351  Q
    || |||||    
T  26843095 atgcctat 26843088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 42200015 - 42200066
Alignment:
Q  261 actttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||| |||||    
T  42200015 actttaaggtgtatttaacaactttttacttatatttttgctaaaacactcc 42200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 42208883 - 42208934
Alignment:
Q  261 actttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||| |||||    
T  42208883 actttaaggtgtatttaacaactttttacttatatttttgctaaaacactcc 42208934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 158444 - 158402
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  158444 ttaaggtgtatttaacaactttttagttttatctttgctaaaa 158402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 3273498 - 3273540
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  3273498 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 3273540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 5491636 - 5491590
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  5491636 cactttaagatgtatttaacaactttttagttatatttttgctaaaa 5491590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 6192454 - 6192412
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  6192454 ttaaggtgtatttaacaactttttagttatatctttgccaaaa 6192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 13157311 - 13157269
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  13157311 ttaaagtgtatttaacaactttttagttatatctttgctaaaa 13157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 28454870 - 28454912
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  28454870 ttaagatgtatttaacaactttttagttatatctttgctaaaa 28454912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 28764579 - 28764537
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  28764579 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 28764537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 34515326 - 34515277
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  34515326 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 34515277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 16005573 - 16005669
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctat 351  Q
    ||||||||  |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| |||||||| |||||    
T  16005573 aagctacatcttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctat 16005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 27787867 - 27787830
Alignment:
Q  272 tatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||| |||||||||||||||||||||||||||||    
T  27787867 tatttaacaactttttagttatatctttgctaaaatac 27787830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 42199853 - 42199916
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    ||||||||||| ||||||| |||||||| ||||||| |||||||||||||| | ||||||||||||    
T  42199853 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttataac-ttgctaaaatac 42199916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 42208721 - 42208784
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    ||||||||||| ||||||| |||||||| ||||||| |||||||||||||| | ||||||||||||    
T  42208721 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttataac-ttgctaaaatac 42208784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 6192612 - 6192572
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  6192612 aagctacaccttaaggtgtatttaactactttttagttata 6192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 34306630 - 34306590
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  34306630 aagctacaccttaaggtgtatttaactactttttagttata 34306590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 13264793 - 13264750
Alignment:
Q  263 tttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||    
T  13264793 tttaaggtgcatttaacaattttttagttatatctttgctaaaa 13264750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 359
Target Start/End: Original strand, 51432012 - 51432107
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtataaat 359  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| || ||| |  | |||| | | |||||||| ||||||| || ||| |||||||    
T  51432012 ttaaagtgtatttaacaactttttagttatatcttcgctaaaacacaccttaataaaaactagtgggtgtatcctagcaaacccttatatataaat 51432107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 13157587 - 13157545
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||| |||||| ||||||||||    
T  13157587 ttaaggtgtatttaacaactttttaattatatttttgctaaaa 13157545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 34515159 - 34515117
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||| || |||||||||||||||||| |||||||    
T  34515159 ttaaggtgtattttacaactttttagttatatcttcgctaaaa 34515117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 45818946 - 45818988
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| || |||||||||||| ||||||||||    
T  45818946 ttaaggtgtatttaacaacattttagttatatatttgctaaaa 45818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 33676179 - 33676224
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||    
T  33676179 ttaaggtgtatttaacaacttattaattatatctttgttaaaatac 33676224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 24770655 - 24770619
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| |||||||| |||||||||||||||||    
T  24770655 tgtatttaacaactttttaattatatctttgctaaaa 24770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 32379607 - 32379643
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| |||||||||||| |||||||||||||    
T  32379607 tgtatttaacaactttttagttacatctttgctaaaa 32379643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 33675830 - 33675870
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||||| |||||||||| ||||||||||||||    
T  33675830 aagctacaccttaagatgtatttaactactttttagttata 33675870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 50559280 - 50559248
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatc 296  Q
    |||||||||||||||| ||||||||||||||||    
T  50559280 ttaaggtgtatttaacaactttttagttatatc 50559248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 57893 - 58000
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||   |||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  57893 tgttttagcaaagctacaccttaaggtgtatttaaccattttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 57992  T
Q  344 atccctat 351  Q
    || |||||    
T  57993 atgcctat 58000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 578958 - 578891
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||    
T  578958 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcatttgctaaaatactc 578891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 6214002 - 6214109
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||  ||| ||  || | |||||||| ||||||    
T  6214002 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttattcacttgctaaaatacttcttctaaaaactaagtgggtgtatcctagcaa 6214101  T
Q  344 atccctat 351  Q
    || |||||    
T  6214102 atgcctat 6214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 42808110 - 42808003
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  42808110 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 42808011  T
Q  344 atccctat 351  Q
    || |||||    
T  42808010 atgcctat 42808003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 48560017 - 48560124
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  48560017 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattaaattgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 48560116  T
Q  344 atccctat 351  Q
    || |||||    
T  48560117 atgcctat 48560124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 7630076 - 7630145
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  7630076 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 7630145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 12584485 - 12584378
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||    
T  12584485 tgttctagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaa 12584386  T
Q  344 atccctat 351  Q
    || |||||    
T  12584385 atgcctat 12584378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 14203069 - 14203002
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||||||||||||    
T  14203069 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttatccacttgctaaaatactc 14203002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 17180969 - 17181076
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||| |||||||||||  ||| ||| || | |||||||  ||||||    
T  17180969 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttattaaattgcaaaaatactccttctaaaaaataagtgggtgtattctagcaa 17181068  T
Q  344 atccctat 351  Q
    || |||||    
T  17181069 atgcctat 17181076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 34683247 - 34683140
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||| || ||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||  ||| ||  || | |||||||| ||||||    
T  34683247 tgttttagcagagttacaccttaaggtgtatttaaccactttttagttatttaattgctaaaatactccttctaaaaactaagtgggtgtatcctagcaa 34683148  T
Q  344 atccctat 351  Q
    || |||||    
T  34683147 atgcctat 34683140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 51784167 - 51784101
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| ||||||||||||    
T  51784167 ttttagcaaagctacaccttaaggtgtatttaatcactttttagttatttatttactaaaatactcc 51784101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 5157017 - 5157066
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5157017 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 5157066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 10981500 - 10981431
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    ||||||||||||||||    
T  10981500 tgttttagcaaagctacaccttaatgtgtatttaaccactttttagttattcacttgctaaaatactcct 10981431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 17745167 - 17745236
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||    ||||||||||||||||    
T  17745167 tgttttagcaaagctacaccttaaggtgtatttaaccattttttagttattcacttgctaaaatactcct 17745236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 18470276 - 18470345
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||    ||||||||||||||||    
T  18470276 tgttttagcaaaactacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcct 18470345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 30820688 - 30820639
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30820688 tgttttagcaaagctacaccttaaggtgtatttaaccactttttagttat 30820639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 13211837 - 13211941
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatc 346  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||    ||||||||||||||||  ||| ||| || | |||||||  ||||||||     
T  13211837 tttagcaaagctacaccttaaggtgtatttgaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatg 13211936  T
Q  347 cctat 351  Q
    |||||    
T  13211937 cctat 13211941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 50182196 - 50182260
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatact 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||    
T  50182196 ttttagcaaagctacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatact 50182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 49970614 - 49970721
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||   ||| |||||||||||||  ||| ||| || | |||||||  ||||||    
T  49970614 tgttttagcaaatctacacattagggtgtatttaaccactttttagttattcattttctaaaatactccttctaaaaaataagtgggtgtattctagcaa 49970713  T
Q  344 atccctat 351  Q
    || |||||    
T  49970714 atgcctat 49970721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 5046839 - 5046770
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||||    ||||||||||||||||    
T  5046839 tgttttagcaaagttacaccttaaggtgtatttaaccattttttagttattcacttgctaaaatactcct 5046770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 26335904 - 26335953
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaatac 309  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26335904 cactttaaggtgtatttaacaattttttagttatatctttgctaaaatac 26335953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 142786 - 142878
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtata 356  Q
    |||||||||||||||| ||||||||||||||||||| |||||| || ||| |  | |||| | |||||||||| ||||||| |||||| ||||    
T  142786 ttaaggtgtatttaacaactttttagttatatctttcctaaaacacaccttagtaaaaactagttggtgtatcctagcaaacccctatatata 142878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 41172432 - 41172496
Alignment:
Q  247 tttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    ||||||||||||||    
T  41172432 tttagcaaagctacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactc 41172496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 13621117 - 13621184
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||    ||||||||||||||    
T  13621117 tgttttagcaaagctaaaaattaaggtgtatttaaccactttttagttattcacttgctaaaatactc 13621184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 13621513 - 13621406
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||||||||  ||  ||||||||||||||||||||||||||    |||||||||||||| |  ||| ||| || | |||||||| ||||||    
T  13621513 tgttttagcaaagctacatcttgtggtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaa 13621414  T
Q  344 atccctat 351  Q
    || |||||    
T  13621413 atgcctat 13621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 21519750 - 21519857
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||   |||||||||||||| ||  ||| ||| || | |||||||  ||||||    
T  21519750 tgttttagtaaagctactccttagggtgtatttaaccactttttagttattgatttgctaaaatacttcttctaaaaaataagtgggtgtattctagcaa 21519849  T
Q  344 atccctat 351  Q
    || |||||    
T  21519850 atgcctat 21519857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 6192999 - 6192957
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  6192999 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 6192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 23383970 - 23383928
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  23383970 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 23383928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 47382181 - 47382247
Alignment:
Q  245 gttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactc 311  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||    ||||||||||||||    
T  47382181 gttttagcaaagctacaccttaaggtgtatttaatcactttttggttattcacttgctaaaatactc 47382247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 49425804 - 49425762
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  49425804 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 49425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 49606163 - 49606205
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  49606163 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 49606205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 52437635 - 52437586
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  52437635 tgttttagcaaa-ctacaccttaaggtgtatttaaccactttttagttata 52437586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 17377512 - 17377581
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||||||||||||||| |||||||||||| ||| | |||||||||||    ||||||||||||||||    
T  17377512 tgttttagcaaagctacaccttaaggtgtattaaactattttttagttattcacttgctaaaatactcct 17377581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 38425696 - 38425648
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  38425696 ttaaggtgtatttaacaacttttcagttatatctttgctaaaacactcc 38425648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 26335743 - 26335848
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| || |||    
T  26335743 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaa 26335840  T
Q  344 atccctat 351  Q
    || |||||    
T  26335841 atgcctat 26335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 30258349 - 30258396
Alignment:
Q  246 ttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  30258349 ttttagcaaagctacaccttaggatgtatttaaccactttttagttat 30258396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 11777540 - 11777498
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  11777540 ttaaggtgtatttaacaactttttagttatacctttgctaaaa 11777498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 26958558 - 26958607
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  26958558 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttata 26958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 45875926 - 45875968
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  45875926 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 45875968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 46106841 - 46106883
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  46106841 ttaaggtgtatttaacaattttttagttatatctttgctaaaa 46106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 52306935 - 52306977
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  52306935 ttaaggtgtatttaacaactttttagttatatatttgctaaaa 52306977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 40496186 - 40496137
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  40496186 ttaaggtatatttaacaactttttagttatatcttttctaaaacactcct 40496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 4712821 - 4712873
Alignment:
Q  260 cactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||||||| | ||| ||||||||||||| | ||||||||||    
T  4712821 cactttaaggtgtatttaacaaatttctagttatatctttacgaaaatactcc 4712873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 38425603 - 38425555
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||    
T  38425603 ttaaggtgtatttaacaactttttagttatatttttactaaaacactcc 38425555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 4712659 - 4712764
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||| ||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | ||||||| ||||| |    
T  4712659 tgttttagcaa-gctacaccttaaggtgcatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtattttagcga 4712756  T
Q  344 atccctat 351  Q
    || |||||    
T  4712757 atgcctat 4712764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 6137499 - 6137597
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||||| || || |||||||| ||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | ||||||| |||||||    
T  6137499 tgttttagcaaagatataccttaaggtgcatttaactactttttagttata-ccttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaa 6137597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 6946647 - 6946752
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||||| | ||||||||| ||  ||  ||| ||| || | |||||||| ||||||    
T  6946647 tgttttagcaa-gctacaccttaaagtgtatttaactactttttagttataac-ttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaa 6946744  T
Q  344 atccctat 351  Q
    || |||||    
T  6946745 atgcctat 6946752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 14862975 - 14863079
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||| ||||| | ||||||||| || | || ||| ||| || | |||||||| ||||||    
T  14862975 tgttttagcaa-gctacaccttaaggtgtatttaactactttttaattataac-ttgctaaaacacacttc-taaaaaataagtgggtgtatcctagcaa 14863071  T
Q  344 atccctat 351  Q
    || |||||    
T  14863072 atgcctat 14863079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 102291 - 102249
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||| ||||||||||| |||||||||||||||||||| |||||    
T  102291 ttaatgtgtatttaacaactttttagttatatctttgttaaaa 102249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 9744176 - 9744134
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||    
T  9744176 ttaaggtgtatctaacaactttttagttatatctttactaaaa 9744134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 14948289 - 14948331
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||    
T  14948289 ttaagatgtatttaacaactttttagttatatctttactaaaa 14948331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 15725346 - 15725388
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| |||||||||||||||||||| |||||    
T  15725346 ttaagatgtatttaacaactttttagttatatctttgttaaaa 15725388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 16553427 - 16553476
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| ||||||| |||||||||||||||  ||||||||||||||    
T  16553427 tgttttagcaa-gctacaccttaaggtgtatttaattactttttagttata 16553476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 16553592 - 16553634
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  16553592 ttaagatgtatttaacaactttttagttatatatttgctaaaa 16553634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 20458876 - 20458834
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  20458876 ttaaggtgtatttaacaactttttaactatatctttgctaaaa 20458834  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 52306770 - 52306819
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    |||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  52306770 tgttttagcaac-ctacaccttaaggtgtatttaactactttttagttata 52306819  T

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Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 9744328 - 9744236
Alignment:
Q  258 tacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctat 351  Q
    ||||| |||||||||||||||| |||||||| ||||| | ||||||||| || |||  ||| ||| || | |||||||| |||||||| |||||    
T  9744328 tacaccttaaggtgtatttaactactttttatttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctat 9744236  T

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Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 33811285 - 33811326
Alignment:
Q  271 gtatttaaccactttttagttatatctttgctaaaatactcc 312  Q
    ||||||||| ||||||||||||||| |||||||||| |||||    
T  33811285 gtatttaacaactttttagttatatttttgctaaaacactcc 33811326  T

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Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 53975241 - 53975200
Alignment:
Q  258 tacactttaaggtgtatttaaccactttttagttatatcttt 299  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||    
T  53975241 tacaccttaagatgtatttaaccacttttaagttatatcttt 53975200  T

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Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 54742619 - 54742711
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatact-cctcataacaaacaatttggtgtatcttagcaaatccctatgtata 356  Q
    ||||| |||||||||| | ||||| |||||||||||||||||| ||| || | ||| |||| | || ||||||| |||||||||||||| ||||    
T  54742619 ttaagatgtatttaacaaatttttcgttatatctttgctaaaacactcccacgtaa-aaactagttagtgtatcctagcaaatccctatatata 54742711  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 3818788 - 3818832
Alignment:
Q  269 gtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    |||||||||||||||||||||||||    ||||||||||||||||    
T  3818788 gtgtatttaaccactttttagttattcacttgctaaaatactcct 3818832  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 13211582 - 13211542
Alignment:
Q  266 aaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||| ||||||||||||||| |||| |||||    
T  13211582 aaggtgtatttaacaactttttagttatatttttgttaaaa 13211542  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 40496343 - 40496303
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  40496343 aagctacaccttaaggtatatttaactactttttagttata 40496303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 43638988 - 43639028
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||||||||||||||||  |||||||||||||    
T  43638988 aagctacaccttaaggtgtatttaactgctttttagttata 43639028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 45801823 - 45801867
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccacttttta 288  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  45801823 tgttttaacaaagctacacattagagtgtatttaaccacttttta 45801867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 54818630 - 54818666
Alignment:
Q  270 tgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  54818630 tgtatttaacaactttttagttatatgtttgctaaaa 54818666  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 9929 - 9824
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||| || |||  ||| ||| || | |||||||| ||||||    
T  9929 tgttttagcaa-gctacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaa 9832  T
Q  344 atccctat 351  Q
    || |||||    
T  9831 atgcctat 9824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 306
Target Start/End: Complemental strand, 9760 - 9721
Alignment:
Q  267 aggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  9760 aggtgtatttaacaactttttagttatatctttactaaaa 9721  T

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Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 4224 - 4266
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4224 ttaaggtgtatttaacaactttttagttatatctttgctaaaa 4266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 4060 - 4109
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||||| | ||||| |||||||||||||||| ||||||||||||||    
T  4060 tgttttagcaa-gttacaccttaaggtgtatttaactactttttagttata 4109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 20650 - 20558
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaaatccctatgtata 356  Q
    |||||||||||||||| ||||||||||||||| |||||||||| || ||| |  | |||| | | |||||||| ||||||| |||||| ||||    
T  20650 ttaaggtgtatttaacaactttttagttatatttttgctaaaacacaccttaataaaaactactgggtgtatcctagcaaacccctatatata 20558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 20816 - 20711
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| | ||||| |||||||||||||||| |||||||||||||| | ||||||||| |  |||  ||| ||| || | |||||||| ||||||    
T  20816 tgttttagcaa-gatacaccttaaggtgtatttaactactttttagttataac-ttgctaaaacataccttctaaaaaataagtgggtgtatcctagcaa 20719  T
Q  344 atccctat 351  Q
    || |||||    
T  20718 atgcctat 20711  T

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Target: scaffold0325 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 351
Target Start/End: Original strand, 6539 - 6644
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttatatctttgctaaaatactcctcataacaaacaatttggtgtatcttagcaa 343  Q
    ||||||||||| ||||||| |||||||||||||||  |||||||||||||| | |||||||||||| |||  ||| ||| || | | |||||| ||||||    
T  6539 tgttttagcaa-gctacaccttaaggtgtatttaattactttttagttataac-ttgctaaaatacaccttctaaaaaataaatagatgtatcctagcaa 6636  T
Q  344 atccctat 351  Q
    || |||||    
T  6637 atgcctat 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 306
Target Start/End: Original strand, 6712 - 6746
Alignment:
Q  272 tatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||| ||||||||||||||||||||||||||    
T  6712 tatttaacaactttttagttatatctttgctaaaa 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 729 - 771
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  729 ttaaggtgtaattaacaactttttagttatatctttgctaaaa 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 573 - 613
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  573 aagctacaccttaaggtgtttttaactactttttagttata 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 5848 - 5897
Alignment:
Q  264 ttaaggtgtatttaaccactttttagttatatctttgctaaaatactcct 313  Q
    ||||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  5848 ttaaggtatatttaacaactttttagttatatcttttctaaaacactcct 5897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 5692 - 5732
Alignment:
Q  254 aagctacactttaaggtgtatttaaccactttttagttata 294  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  5692 aagctacaccttaaggtatatttaactactttttagttata 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1717
Description:

Target: scaffold1717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 1406 - 1369
Alignment:
Q  269 gtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  1406 gtgtatttaacaactttttagttatatcttcgctaaaa 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1527 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1527
Description:

Target: scaffold1527; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 1652 - 1615
Alignment:
Q  269 gtgtatttaaccactttttagttatatctttgctaaaa 306  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  1652 gtgtatttaacaactttttagttatatcttcgctaaaa 1615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 22813 - 22765
Alignment:
Q  244 tgttttagcaaagctacactttaaggtgtatttaaccactttttagttat 293  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||| ||||    
T  22813 tgttttagcaa-gctacaccttagggtgtatttaaccactttttaattat 22765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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