View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19259_low_21 (Length: 260)
Name: NF19259_low_21
Description: NF19259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19259_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 12321659 - 12321891
Alignment:
| Q |
18 |
ctatgaggccaagacctctcatcctcgtaagaggcagtggtagaactaacatatgaatgcgcatttgaccacttttgattctggaaaacaaggacggctc |
117 |
Q |
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| T |
12321659 |
ctatgaggccaagacctctcatcctcgtaagaggcagtggtagaactaacatatgaatgcgcatttgaccacttttgattctggaaaacaaggacgactc |
12321758 |
T |
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| Q |
118 |
aacactcctagtaggcacagtccctcactgaaatggagcaaggatggctcaacactccttgcaggcactacccctcgctaaaatggagcgttaaagaaaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12321759 |
aacactcctagtaggcacagtccctcactgaaatggagcaaggatggctcaacactccttgcaggcactacccctcgctaaaatggagcgttaaagaaaa |
12321858 |
T |
|
| Q |
218 |
tgaagactgaaattccctccgaaaatccctatg |
250 |
Q |
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|||| |||||||||||||||||||||||||||| |
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| T |
12321859 |
tgaaaactgaaattccctccgaaaatccctatg |
12321891 |
T |
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