View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1925R-Insertion-8 (Length: 230)
Name: NF1925R-Insertion-8
Description: NF1925R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1925R-Insertion-8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 230
Target Start/End: Complemental strand, 24580295 - 24580074
Alignment:
| Q |
9 |
gataaaacccaacaagaccttttatcttttgggaagcagaaatgtagaaacatcatgtgtcaattaataatagggaaatgattcttagacatgaaaattt |
108 |
Q |
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| T |
24580295 |
gataaaaaccaacaagaccttttatcttttgggaagcagaaaagtagaaacatcatgtgtcaattaataatagggaaatgattcttagacatgaaaattt |
24580196 |
T |
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| Q |
109 |
tgaaaagaaaaagttgtctgatttttgtgagtattttattaaagagatcaaaggaaatgttacattaaaagcatcttcaatgatagtatctaagtgagtt |
208 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24580195 |
tgaaaagaaaaagttgtttgatttttgtgagtattttattaaagagatcaaaggaaatgttacattaaaagcatcttcaatgatagtatctaagtgagtt |
24580096 |
T |
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| Q |
209 |
tcatagaatgaagaatcgtttt |
230 |
Q |
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| T |
24580095 |
tcatagaatgatgaatcgtttt |
24580074 |
T |
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