View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1925_high_2 (Length: 248)
Name: NF1925_high_2
Description: NF1925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1925_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 2730696 - 2730457
Alignment:
| Q |
1 |
cttcttgattcaaagttcagtgaattcatagattttacggtgatacaattcaaaggaaccatctagatgtggcatagatcctagtgtttttctcttaaaa |
100 |
Q |
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| T |
2730696 |
cttcttgattcaaagttcagagaattcatagattttacagtgatacaattcaaaggaaccatctagatgtggcatagatcctagtgtttttctcttaaaa |
2730597 |
T |
|
| Q |
101 |
cggggttgataggtggatctttcaccatttcaattgtaggtaaaaggtacaagatatgggtgaaggaagaagatttacggtggatgaatgggcggaggaa |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2730596 |
tggggttaataggtggatctttcaccatttcaattgtaggtataaggtacaagatatgggtgaaggaagaagatttacggtggatgaatgggcggaggaa |
2730497 |
T |
|
| Q |
201 |
caacggtgaaggtagttcgattgagggtgatggttcatct |
240 |
Q |
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|||| ||||||||||||||||||||||||||||||||||| |
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| T |
2730496 |
caacagtgaaggtagttcgattgagggtgatggttcatct |
2730457 |
T |
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