View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19261_high_11 (Length: 251)
Name: NF19261_high_11
Description: NF19261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19261_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5259964 - 5260199
Alignment:
| Q |
1 |
tttcctagcccccatgtgtaactgcaagatccagggaaggaacaaatataaatagtgatgaaacattttcacaagctaaattccataactaatcattttt |
100 |
Q |
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| T |
5259964 |
tttcctagcccccatgtgtaactgcaagatccagg-aaggaacaaatataaatagtgatgaaacattttcacaagctaaattccataactaatcattttt |
5260062 |
T |
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| Q |
101 |
aatatggcttat--ggttcccaaataacatataactggaacaaaccactccttgcacagcctggttaaatacaagtatgtttccatgtatcagatgagca |
198 |
Q |
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| T |
5260063 |
agtatggcttatatggttcccaaataacatataactggaacaaaccactccttgcacagcctggttaaatacaagtatgtctccatgtatcagatgagca |
5260162 |
T |
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| Q |
199 |
aaagaaactgaattgaagcgaaggagcttgaggattt |
235 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
5260163 |
aaagaaactgaattgaagcgaaggagcttgaggattt |
5260199 |
T |
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