View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19262_high_4 (Length: 354)

Name: NF19262_high_4
Description: NF19262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19262_high_4
NF19262_high_4
[»] chr7 (1 HSPs)
chr7 (14-308)||(37515215-37515509)


Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 14 - 308
Target Start/End: Complemental strand, 37515509 - 37515215
Alignment:
Q  14 gaacagaattagaacaatgtcaaacgtcggtaaggggcagaacaaccatgttctagaggaagcaaattatgttaacaagatggaaaatcataatgaccat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515509 gaacagaattagaacaatgtcaaacgtcggtaaggggcagaacaaccatgttctagaggaagcaaattatgttaacaagatggaaaatcataatgaccat 37515410  T
Q  114 ttttcagattttattgtacaagctaagaagaggattagaactacatcaaatgttggaaaaactagttccttgaaaagaggttaagatgtatagtgtgaac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515409 ttttcagattttattgtacaagctaagaagaggattagaactacatcaaatgttggaaaaactagttccttgaaaagaggttaagatgtatagtgtgaac 37515310  T
Q  214 attcgttggtggttttcattttcaatgtgttaggtgtctaatattcgtttttgagtggattggattgaaaaataaggtctataatgatatatgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37515309 attcgttggtggttttcattttcaatgtgttaggtgtctaatattcgtttttgagtggattggattgaaaaataaggtctataatgatatatgtt 37515215  T

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