View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19263_high_8 (Length: 248)

Name: NF19263_high_8
Description: NF19263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19263_high_8
NF19263_high_8
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-245)||(166144-166381)
[»] chr7 (30 HSPs)
chr7 (124-245)||(9651025-9651146)
chr7 (133-245)||(8075975-8076087)
chr7 (133-245)||(44423195-44423307)
chr7 (138-245)||(4930164-4930270)
chr7 (144-245)||(26341136-26341236)
chr7 (133-241)||(8268219-8268326)
chr7 (135-245)||(13314294-13314403)
chr7 (136-245)||(42627255-42627364)
chr7 (133-248)||(3879922-3880037)
chr7 (185-243)||(3357692-3357750)
chr7 (139-241)||(27238173-27238275)
chr7 (185-245)||(4579485-4579545)
chr7 (139-248)||(9008086-9008203)
chr7 (185-241)||(10388427-10388483)
chr7 (169-241)||(44510739-44510811)
chr7 (190-245)||(25543420-25543475)
chr7 (187-248)||(29150913-29150974)
chr7 (185-245)||(23246991-23247051)
chr7 (133-245)||(30256780-30256891)
chr7 (152-245)||(23866023-23866105)
chr7 (191-245)||(16372381-16372435)
chr7 (137-177)||(6591083-6591123)
chr7 (207-243)||(47993800-47993836)
chr7 (204-241)||(24528351-24528388)
chr7 (133-185)||(10388495-10388546)
chr7 (185-241)||(12254056-12254112)
chr7 (185-241)||(26287220-26287276)
chr7 (133-185)||(26287288-26287339)
chr7 (207-243)||(33238002-33238038)
chr7 (207-243)||(47998975-47999011)
[»] chr4 (43 HSPs)
chr4 (124-245)||(13522050-13522171)
chr4 (132-245)||(8693636-8693748)
chr4 (133-245)||(31273447-31273558)
chr4 (135-245)||(31268962-31269071)
chr4 (133-245)||(37259935-37260046)
chr4 (133-245)||(37264622-37264733)
chr4 (149-248)||(47574566-47574665)
chr4 (133-242)||(19106545-19106653)
chr4 (133-241)||(8030538-8030645)
chr4 (133-245)||(5271477-5271586)
chr4 (133-245)||(12823953-12824064)
chr4 (133-237)||(32221163-32221266)
chr4 (133-245)||(16420956-16421066)
chr4 (133-242)||(32082151-32082259)
chr4 (133-241)||(5928281-5928388)
chr4 (169-245)||(33463414-33463490)
chr4 (135-248)||(51697841-51697957)
chr4 (138-241)||(33469035-33469137)
chr4 (132-245)||(19101902-19102014)
chr4 (185-245)||(31765863-31765923)
chr4 (133-245)||(55251647-55251756)
chr4 (185-248)||(12878216-12878279)
chr4 (151-245)||(13059354-13059447)
chr4 (151-245)||(47244192-47244285)
chr4 (133-180)||(8652131-8652178)
chr4 (133-180)||(8663938-8663985)
chr4 (190-245)||(42758813-42758868)
chr4 (134-193)||(55810257-55810315)
chr4 (185-242)||(13065829-13065886)
chr4 (133-241)||(48276706-48276807)
chr4 (203-243)||(10120868-10120908)
chr4 (185-237)||(12874516-12874568)
chr4 (139-242)||(51696931-51697036)
chr4 (185-240)||(19906228-19906283)
chr4 (190-248)||(1151353-1151411)
chr4 (207-243)||(653043-653079)
chr4 (204-248)||(24490028-24490072)
chr4 (207-243)||(36354176-36354212)
chr4 (207-243)||(36359294-36359330)
chr4 (207-243)||(39999069-39999105)
chr4 (207-243)||(40004027-40004063)
chr4 (207-243)||(54343203-54343239)
chr4 (207-243)||(54348357-54348393)
[»] scaffold0045 (1 HSPs)
scaffold0045 (133-248)||(82991-83106)
[»] chr5 (35 HSPs)
chr5 (133-245)||(12045197-12045309)
chr5 (130-245)||(3665854-3665969)
chr5 (133-245)||(7451684-7451795)
chr5 (133-245)||(12102950-12103062)
chr5 (133-245)||(29168031-29168142)
chr5 (133-245)||(39518336-39518447)
chr5 (133-245)||(42001360-42001471)
chr5 (128-243)||(36423558-36423672)
chr5 (133-248)||(37652885-37652999)
chr5 (132-245)||(37248853-37248965)
chr5 (133-241)||(556621-556728)
chr5 (133-241)||(561393-561500)
chr5 (133-245)||(41996591-41996702)
chr5 (133-245)||(12501957-12502069)
chr5 (133-245)||(39522974-39523086)
chr5 (133-245)||(6155477-6155588)
chr5 (133-245)||(26667198-26667309)
chr5 (133-245)||(26938795-26938906)
chr5 (138-241)||(36428640-36428742)
chr5 (133-248)||(41587215-41587329)
chr5 (133-245)||(6514659-6514769)
chr5 (162-242)||(36942326-36942406)
chr5 (162-242)||(36937572-36937652)
chr5 (133-241)||(10759882-10759992)
chr5 (133-245)||(12041990-12042101)
chr5 (133-245)||(20181121-20181233)
chr5 (133-245)||(35679933-35680047)
chr5 (133-214)||(37550091-37550170)
chr5 (140-245)||(40147828-40147932)
chr5 (138-241)||(11981340-11981443)
chr5 (185-237)||(12102897-12102949)
chr5 (204-243)||(14374132-14374171)
chr5 (207-243)||(13582749-13582785)
chr5 (207-243)||(24435928-24435964)
chr5 (205-241)||(32461611-32461647)
[»] chr1 (30 HSPs)
chr1 (133-245)||(23192875-23192986)
chr1 (133-245)||(25855097-25855208)
chr1 (138-242)||(3094045-3094148)
chr1 (133-241)||(16649674-16649781)
chr1 (133-245)||(19799071-19799182)
chr1 (135-245)||(18784607-18784716)
chr1 (132-245)||(47455444-47455556)
chr1 (133-245)||(26927780-26927891)
chr1 (133-245)||(40165906-40166017)
chr1 (133-245)||(10135382-10135493)
chr1 (133-245)||(51041520-51041630)
chr1 (133-242)||(47451286-47451394)
chr1 (133-245)||(33301238-33301349)
chr1 (133-245)||(39588425-39588536)
chr1 (133-248)||(16832027-16832141)
chr1 (133-214)||(25843738-25843818)
chr1 (138-245)||(38620624-38620730)
chr1 (185-245)||(10140066-10140126)
chr1 (185-248)||(11806336-11806399)
chr1 (133-245)||(16035528-16035645)
chr1 (199-245)||(2493875-2493922)
chr1 (185-248)||(8900231-8900294)
chr1 (185-248)||(12259973-12260036)
chr1 (204-243)||(10106100-10106139)
chr1 (204-243)||(38734272-38734311)
chr1 (204-241)||(13890810-13890847)
chr1 (219-248)||(33380975-33381004)
chr1 (199-243)||(19422937-19422981)
chr1 (207-243)||(36684774-36684810)
chr1 (133-185)||(46696596-46696647)
[»] scaffold0352 (1 HSPs)
scaffold0352 (130-245)||(7027-7141)
[»] chr3 (40 HSPs)
chr3 (132-245)||(39775786-39775898)
chr3 (133-245)||(7571276-7571387)
chr3 (133-242)||(3672510-3672618)
chr3 (133-242)||(3692542-3692650)
chr3 (133-245)||(23666181-23666292)
chr3 (133-245)||(24038429-24038540)
chr3 (130-245)||(29350161-29350275)
chr3 (133-245)||(8069603-8069715)
chr3 (138-245)||(758426-758532)
chr3 (133-245)||(3418918-3419030)
chr3 (138-242)||(3033573-3033676)
chr3 (133-245)||(8883094-8883205)
chr3 (133-241)||(8887854-8887961)
chr3 (133-245)||(14438753-14438864)
chr3 (133-245)||(18467149-18467260)
chr3 (133-245)||(20519978-20520089)
chr3 (130-245)||(27708800-27708913)
chr3 (135-241)||(12965935-12966040)
chr3 (135-245)||(49971482-49971591)
chr3 (135-248)||(29715570-29715682)
chr3 (136-248)||(55431242-55431353)
chr3 (133-245)||(3657298-3657409)
chr3 (133-226)||(23661527-23661619)
chr3 (133-233)||(18471932-18472031)
chr3 (133-241)||(2207769-2207876)
chr3 (185-245)||(12112699-12112759)
chr3 (162-245)||(32474738-32474819)
chr3 (185-245)||(12971691-12971751)
chr3 (133-188)||(6606772-6606827)
chr3 (199-243)||(25726853-25726897)
chr3 (204-243)||(33089402-33089441)
chr3 (204-243)||(53119524-53119563)
chr3 (199-245)||(26962051-26962097)
chr3 (135-185)||(28125030-28125080)
chr3 (219-248)||(48435882-48435911)
chr3 (207-243)||(15763089-15763125)
chr3 (207-243)||(15768250-15768286)
chr3 (128-164)||(17026255-17026291)
chr3 (207-243)||(20090721-20090757)
chr3 (207-243)||(20095846-20095882)
[»] chr2 (33 HSPs)
chr2 (132-245)||(1935051-1935163)
chr2 (133-242)||(19892527-19892635)
chr2 (133-245)||(9189861-9189972)
chr2 (133-245)||(30650855-30650966)
chr2 (133-248)||(25478352-25478470)
chr2 (139-248)||(28603230-28603338)
chr2 (133-245)||(9180782-9180893)
chr2 (133-245)||(10160782-10160893)
chr2 (133-245)||(18344357-18344468)
chr2 (133-245)||(30658189-30658300)
chr2 (133-242)||(31326665-31326773)
chr2 (133-245)||(35601848-35601959)
chr2 (133-237)||(42926827-42926929)
chr2 (133-237)||(29677694-29677796)
chr2 (133-245)||(30631505-30631616)
chr2 (133-245)||(35639055-35639166)
chr2 (133-244)||(25497384-25497498)
chr2 (133-245)||(29677308-29677418)
chr2 (133-241)||(12796851-12796958)
chr2 (133-241)||(7737913-7738020)
chr2 (133-185)||(20711358-20711410)
chr2 (185-241)||(19578476-19578532)
chr2 (133-214)||(15489803-15489883)
chr2 (185-241)||(19094557-19094613)
chr2 (186-241)||(40847657-40847712)
chr2 (133-178)||(40847735-40847779)
chr2 (185-248)||(17545353-17545417)
chr2 (206-242)||(39542900-39542936)
chr2 (207-243)||(42723510-42723546)
chr2 (207-243)||(42728679-42728715)
chr2 (207-243)||(44096302-44096338)
chr2 (207-243)||(44754655-44754691)
chr2 (207-243)||(44759821-44759857)
[»] chr8 (33 HSPs)
chr8 (133-245)||(40130744-40130855)
chr8 (133-245)||(17025861-17025972)
chr8 (133-245)||(17556353-17556464)
chr8 (132-245)||(33416472-33416584)
chr8 (133-245)||(31449924-31450035)
chr8 (133-248)||(1807398-1807512)
chr8 (138-242)||(4238376-4238479)
chr8 (132-245)||(44925981-44926093)
chr8 (133-245)||(1911027-1911138)
chr8 (138-242)||(4243115-4243218)
chr8 (133-245)||(18876425-18876535)
chr8 (133-245)||(38182295-38182405)
chr8 (133-242)||(34118392-34118500)
chr8 (135-245)||(28559712-28559821)
chr8 (133-214)||(19915073-19915153)
chr8 (185-245)||(24090604-24090664)
chr8 (185-245)||(19166611-19166671)
chr8 (185-245)||(23548690-23548750)
chr8 (189-245)||(40125943-40125999)
chr8 (185-245)||(17953931-17953991)
chr8 (185-245)||(36683556-36683616)
chr8 (204-248)||(31030525-31030569)
chr8 (204-243)||(19430011-19430050)
chr8 (204-243)||(19435513-19435552)
chr8 (204-243)||(19566160-19566199)
chr8 (204-243)||(19571662-19571701)
chr8 (190-248)||(24673380-24673438)
chr8 (207-245)||(32015700-32015738)
chr8 (206-243)||(33616786-33616823)
chr8 (133-162)||(43302851-43302880)
chr8 (176-248)||(2355514-2355586)
chr8 (203-243)||(13584346-13584386)
chr8 (185-245)||(15875726-15875786)
[»] scaffold0002 (2 HSPs)
scaffold0002 (132-245)||(3999-4111)
scaffold0002 (133-214)||(444021-444101)
[»] scaffold0182 (1 HSPs)
scaffold0182 (133-245)||(9945-10056)
[»] chr6 (25 HSPs)
chr6 (133-245)||(6407918-6408029)
chr6 (132-247)||(11534734-11534848)
chr6 (132-247)||(11560244-11560358)
chr6 (145-245)||(11570807-11570906)
chr6 (133-248)||(8747708-8747822)
chr6 (131-242)||(19674237-19674347)
chr6 (135-246)||(12688899-12689009)
chr6 (131-245)||(33687661-33687774)
chr6 (133-245)||(2700164-2700276)
chr6 (133-242)||(21308960-21309065)
chr6 (139-245)||(11427975-11428080)
chr6 (132-178)||(2760379-2760425)
chr6 (187-245)||(12406411-12406469)
chr6 (136-197)||(17964636-17964696)
chr6 (138-248)||(24589219-24589342)
chr6 (187-245)||(13736736-13736794)
chr6 (135-185)||(20748414-20748464)
chr6 (185-237)||(2863518-2863570)
chr6 (203-243)||(12183060-12183100)
chr6 (185-241)||(29892323-29892379)
chr6 (204-243)||(19478145-19478184)
chr6 (134-172)||(12406493-12406531)
chr6 (204-241)||(3901909-3901946)
chr6 (203-248)||(5601027-5601072)
chr6 (207-243)||(22698302-22698338)
[»] scaffold0054 (1 HSPs)
scaffold0054 (133-248)||(25325-25439)
[»] scaffold0057 (1 HSPs)
scaffold0057 (133-248)||(35560-35674)
[»] scaffold0097 (1 HSPs)
scaffold0097 (133-185)||(15197-15249)
[»] scaffold0240 (1 HSPs)
scaffold0240 (185-237)||(3968-4020)
[»] scaffold0132 (2 HSPs)
scaffold0132 (204-248)||(2826-2870)
scaffold0132 (204-248)||(10786-10830)
[»] scaffold0067 (1 HSPs)
scaffold0067 (204-243)||(34028-34067)
[»] scaffold2020 (1 HSPs)
scaffold2020 (131-164)||(281-314)
[»] scaffold0009 (1 HSPs)
scaffold0009 (131-164)||(165181-165214)
[»] scaffold0055 (1 HSPs)
scaffold0055 (207-243)||(3058-3094)
[»] scaffold0052 (1 HSPs)
scaffold0052 (207-243)||(81441-81477)


Alignment Details
Target: scaffold0012 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 166381 - 166144
Alignment:
Q  8 catcgaacctggccagttatatataaacgcataaaaaacgataaaagtattcgatgagggactcaaagtaagcatgatgtgcaaataatacttgtcaaac 107  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  166381 catcaaacctggctagttttatataaacgcataaaaaacgataaaagtattcgatgtgggactaaaagtaagcatgatgtgcaaataatacttgtcaaac 166282  T
Q  108 ttctttcgttgagaagatgaggaactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggtt 207  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  166281 ttctttcgttaagaagatgatgaactgttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaaattgatactaggtt 166182  T
Q  208 gagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  166181 gagtcacaaccaggtcgctctctttaagacgtttcgtg 166144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 9e-51; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 9651146 - 9651025
Alignment:
Q  124 atgaggaactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtc 223  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  9651146 atgatgaattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtc 9651047  T
Q  224 gctctctttaagacgtttcgtg 245  Q
    ||||||||||||||||||||||    
T  9651046 gctctctttaagacgtttcgtg 9651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 8075975 - 8076087
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||| |||| ||||||||||| | |||||||||||||||    
T  8075975 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctactgaagttgttactgggttgagtcacgaccaggtcgctctcttt 8076074  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  8076075 aagacgtttcgtg 8076087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 44423307 - 44423195
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||| || |||||| |||||| |||||||||||||||| | ||| |||||||||||    
T  44423307 tgttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagttgttactaggttgagtcacgatcagatcgctctcttt 44423208  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  44423207 aagacgtttcgtg 44423195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 4930164 - 4930270
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    |||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  4930164 tttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 4930262  T
Q  238 gtttcgtg 245  Q
    ||||||||    
T  4930263 gtttcgtg 4930270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 26341136 - 26341236
Alignment:
Q  144 gattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||||||||||||| || |||||||| ||| || ||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||    
T  26341136 gattttcaaactgttgtattt-ggatttccaaaatctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcg 26341234  T
Q  244 tg 245  Q
    ||    
T  26341235 tg 26341236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 8268219 - 8268326
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||| || ||||||||||||| |||||  ||||||||| | |||||||||||||||    
T  8268219 tgttgtttttggatttccaaactgttgtattt-gcatttccaaattctattatctaccgaagttgttactatattgagtcacgaccaggtcgctctcttt 8268317  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  8268318 aagacgttt 8268326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 13314403 - 13314294
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||| ||| ||||||||||||||| || ||||||||||||  | ||||||| ||||| |||||||||||||||| | ||| |||||||||||||    
T  13314403 ttgtttttgggtttccaaactgttgtattt-ggatttccaaattctactatctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaa 13314305  T
Q  235 gacgtttcgtg 245  Q
    |||||||||||    
T  13314304 gacgtttcgtg 13314294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 42627364 - 42627255
Alignment:
Q  136 tgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatact-aggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||| |||| ||||||||||||||| |  |||||||||||| || ||||||||||||| |||| ||||||| |||| | |||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtattt-gaatttccaaattctattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaa 42627266  T
Q  235 gacgtttcgtg 245  Q
    |||||||||||    
T  42627265 gacgtttcgtg 42627255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 3879922 - 3880037
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactagg-ttgagtcacaaacaggtcgctctctt 231  Q
    ||||||| ||||||||| ||| |||||||||||| ||| ||||||||| ||||| |||||| ||| ||||||| ||||||||| | |||||| || ||||    
T  3879922 tgttgttcttggatttttaaattgttgtattttgattt-ccaaattctattttccaccgaatttgttactaggtttgagtcacgatcaggtcactttctt 3880020  T
Q  232 taagacgtttcgtgaca 248  Q
    |||||||||| ||||||    
T  3880021 taagacgttttgtgaca 3880037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 3357750 - 3357692
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  3357750 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 3357692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 27238173 - 27238275
Alignment:
Q  139 ttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacg 238  Q
    ||||||||||  ||||| |||||||| | |||| |||| ||| || ||||  ||||||| |||||||||||||||| | |||||||||||||||||||||    
T  27238173 ttttggatttctaaactattgtatttggatttttcaaactctattatctatggaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 27238272  T
Q  239 ttt 241  Q
    |||    
T  27238273 ttt 27238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 4579485 - 4579545
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||| |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  4579485 tctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 4579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 9008086 - 9008203
Alignment:
Q  139 ttttggattttcaaactgttgtattttggttttccaaattctgtttt--------ctaccgaagttgatactaggttgagtcacaaacaggtcgctctct 230  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||         |||| |||||| |||||||||||||||| | || ||| ||||||    
T  9008086 ttttggatttccaaactgttgtattttggttttctaaattctattttgaaagagagtaccaaagttgttactaggttgagtcacgaccatgtccctctct 9008185  T
Q  231 ttaagacgtttcgtgaca 248  Q
    ||||||||||| ||||||    
T  9008186 ttaagacgtttagtgaca 9008203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 10388483 - 10388427
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  10388483 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttt 10388427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 44510811 - 44510739
Alignment:
Q  169 tttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| | ||| | ||||||||||||||||||    
T  44510811 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttt 44510739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 25543475 - 25543420
Alignment:
Q  190 cgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtg 25543420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 29150913 - 29150974
Alignment:
Q  187 taccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||| |||||||||||||||| | ||| ||||||| |||||||||||||||||||    
T  29150913 taccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgaca 29150974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 23247051 - 23246991
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  23247051 tctaccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtg 23246991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 30256780 - 30256891
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||  ||||| |||||||| || ||| |||||||| || ||||||||||||  ||| |||||||||||| | ||| ||||| | |||    
T  30256780 tgttgtttttggatttataaactattgtattt-ggatttgcaaattctattatctaccgaagtttttacaaggttgagtcacgaccagatcgctgttttt 30256878  T
Q  233 aagacgtttcgtg 245  Q
    ||||| |||||||    
T  30256879 aagacatttcgtg 30256891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 23866023 - 23866105
Alignment:
Q  152 aactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||||||||||||||||||| || | |||||||           |||||||||| | ||||||||||||||||||||||||||||    
T  23866023 aactgttgtattttggttttccaaattctattatttaccgaa-----------gttgagtcacgaccaggtcgctctctttaagacgtttcgtg 23866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16372381 - 16372435
Alignment:
Q  191 gaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||| |||||||||||||||| | || |||||||||||||||| ||||||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtg 16372435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 6591123 - 6591083
Alignment:
Q  137 gtttttggattttcaaactgttgtattttggttttccaaat 177  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  6591123 gtttttggattttcaaattgttgtattttggatttccaaat 6591083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 47993800 - 47993836
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||||| ||||||||||||||||||||||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcg 47993836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 24528351 - 24528388
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttt 24528388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 10388546 - 10388495
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    |||||||||| ||||||||| |||||||| ||||| |||||||||||| ||||    
T  10388546 tgttgtttttagattttcaagctgttgta-tttggatttccaaattctatttt 10388495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 12254056 - 12254112
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    |||| |||||||| ||| |||||||||| | | ||||||||||||||||||| ||||    
T  12254056 tctatcgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttt 12254112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 26287276 - 26287220
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||||| |||||||||||||||| | || | |||| ||||||||| ||||    
T  26287276 tctaccgaagttgttactaggttgagtcacgaccatgccgctttctttaagatgttt 26287220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 26287339 - 26287288
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    ||||||||||||||||  ||||||||||| ||||| |||||||||||| ||||    
T  26287339 tgttgtttttggatttcaaaactgttgta-tttggatttccaaattctatttt 26287288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 33238002 - 33238038
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcg 33238038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 47998975 - 47999011
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcg 47999011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 13522171 - 13522050
Alignment:
Q  124 atgaggaactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtc 223  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  13522171 atgatgaattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtc 13522072  T
Q  224 gctctctttaagacgtttcgtg 245  Q
    ||||||||||||||||||||||    
T  13522071 gctctctttaagacgtttcgtg 13522050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 8693636 - 8693748
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||    
T  8693636 ctgttgtttttggattttcaaactgttgtattt-ggatttccaaattctattgtctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 8693734  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  8693735 taagacgtttcgtg 8693748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 31273447 - 31273558
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  31273447 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 31273545  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  31273546 aagacgtttcgtg 31273558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 31268962 - 31269071
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    ||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  31268962 ttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 31269060  T
Q  235 gacgtttcgtg 245  Q
    |||||||||||    
T  31269061 gacgtttcgtg 31269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 37260046 - 37259935
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  37260046 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctttcttt 37259948  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  37259947 aagacgtttcgtg 37259935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 37264733 - 37264622
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | |||||||||||||||    
T  37264733 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 37264635  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  37264634 aagacgtttcgtg 37264622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 47574566 - 47574665
Alignment:
Q  149 tcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    |||||||||||||||||| ||||||||||||| || ||||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  47574566 tcaaactgttgtattttgattttccaaattctattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgaca 47574665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 19106545 - 19106653
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||||||| || ||||||| || |||||||||||| || ||||||||||||| |||||||||||||||||| ||| ||||| |||||    
T  19106545 tgttgtttttggattttcaaattgctgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacaagcagatcgctttcttt 19106643  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  19106644 aagacgtttc 19106653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 8030645 - 8030538
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| ||||||||||||||||||||   ||||| ||||||| || ||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  8030645 tgttgtttttgaattttcaaactgttgtatttgaattttc-aaattctattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctcttt 8030547  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  8030546 aagacgttt 8030538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 5271586 - 5271477
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||| |   |||  |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  5271586 tgttgtttttggatttccaaactgttat---ttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 5271490  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  5271489 aagacgtttcgtg 5271477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 12824064 - 12823953
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| |||||  |||||||||||||| || |||||||||||| |||||||||||||||| || ||||||||||||  | |||||||||||||||    
T  12824064 tgttgttttttgatttctaaactgttgtattt-ggatttccaaattctattttctaccgaagttgttattaggttgagtcatgaccaggtcgctctcttt 12823966  T
Q  233 aagacgtttcgtg 245  Q
    ||||| |||||||    
T  12823965 aagacatttcgtg 12823953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 32221266 - 32221163
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||||||| |||||||||| | ||||| ||||||| || ||||||||| ||| |||||||||||||||| | |||||||||||||||    
T  32221266 tgttgtttttggattttcaaattgttgtatttggattttc-aaattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctcttt 32221168  T
Q  233 aagac 237  Q
    |||||    
T  32221167 aagac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 16420956 - 16421066
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| | ||| |  |||||| || ||||||||||||| |||||||||||||||| | |||||||||||| ||    
T  16420956 tgttgtttttggatttccaaactgttgtatttagatttcc--aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcatt 16421053  T
Q  233 aagacgtttcgtg 245  Q
    ||||| |||||||    
T  16421054 aagacatttcgtg 16421066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 32082259 - 32082151
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || || |||||||||| |||||||||||||||| | ||| || |||| |||    
T  32082259 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatcaaccgaagttgttactaggttgagtcacgaccagatcactcttttt 32082161  T
Q  233 aagacgtttc 242  Q
    ||||| ||||    
T  32082160 aagacatttc 32082151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 5928388 - 5928281
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| ||||| ||||||||||||||| |  |||| ||||||| || ||||||||||||| ||| |||||||||||| | |||||||||||||||    
T  5928388 tgttgtttttagatttccaaactgttgtatttggagtttc-aaattctattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctcttt 5928290  T
Q  233 aagacgttt 241  Q
    |||| ||||    
T  5928289 aagatgttt 5928281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 33463490 - 33463414
Alignment:
Q  169 tttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  33463490 tttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 33463414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 51697841 - 51697957
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattc----tgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctct 230  Q
    ||||||||||||||||||||| |||||||| || |||||||||||    | || ||||||||||||| |||||||||||||||| | ||| ||||||| |    
T  51697841 ttgtttttggattttcaaactattgtattt-ggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctcttt 51697939  T
Q  231 ttaagacgtttcgtgaca 248  Q
    |||||||||||| |||||    
T  51697940 ttaagacgtttcatgaca 51697957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 33469137 - 33469035
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||| || ||||| ||||||| |||||||||||||||| |  |||||| ||||||||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttc-aaattctattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagac 33469039  T
Q  238 gttt 241  Q
    ||||    
T  33469038 gttt 33469035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 19101902 - 19102014
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||||||||  |||||||||||||| || |||||||||||| || |||| | |||||| ||||||||| |||||| |  ||||| |||| ||    
T  19101902 ctgttgtttttggatttataaactgttgtattt-ggatttccaaattctattatctatcaaagttgttactaggttaagtcacgacgaggtcactctgtt 19102000  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  19102001 taagacgtttcgtg 19102014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 31765863 - 31765923
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  31765863 tctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtg 31765923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 55251647 - 55251756
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| ||||| ||||||||||||||| || ||||||| |||| || ||||  ||||||| |||||||||||||||| | ||||||||||| |||    
T  55251647 tgttgtttttcgatttccaaactgttgtattt-ggatttccaa-ttctattatctattgaagttgttactaggttgagtcacgaccaggtcgctct-ttt 55251743  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  55251744 aagacgtttcgtg 55251756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 12878216 - 12878279
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  12878216 tctacggaagttgttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgaca 12878279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 13059354 - 13059447
Alignment:
Q  151 aaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||||||||| | ||||| ||||||| || ||||||||||||  |||||||||||||||  | ||| ||||||||||||||||||||||||    
T  13059354 aaactgttgtatttggattttc-aaattctattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtg 13059447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 47244192 - 47244285
Alignment:
Q  151 aaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||||||||| || |||||||||| | || |||| |||||||| || ||||||||||||| | |||||||| |||||||||||||||||||    
T  47244192 aaactgttgtattt-ggatttccaaattatattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtg 47244285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 8652178 - 8652131
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattct 180  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8652178 tgttgtttttggatttccaaactgttgtattttgattttccaaattct 8652131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 8663985 - 8663938
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattct 180  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8663985 tgttgtttttggatttccaaactgttgtattttgattttccaaattct 8663938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 42758868 - 42758813
Alignment:
Q  190 cgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtg 42758813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 55810315 - 55810257
Alignment:
Q  134 gttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaa 193  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| || |||||||||    
T  55810315 gttgtttttggattttcaaactgttgta-tttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 13065886 - 13065829
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttc 242  Q
    ||||||||||||| |||||||||||||||| |  | ||||||||||||||||||||||    
T  13065886 tctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttc 13065829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 48276807 - 48276706
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||| |||||||||||| ||| |||||||||| || |||||||||||     |||||| |||||  ||||||||||| |||| | |||||||||||||||    
T  48276807 tgttctttttggatttttaaattgttgtattt-ggatttccaaattca----tctacccaagtt--tactaggttgaatcacgatcaggtcgctctcttt 48276715  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  48276714 aagacgttt 48276706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 10120908 - 10120868
Alignment:
Q  203 aggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  10120908 aggttgagtcacgatcaggtcgctctctttaagacgtttcg 10120868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 12874516 - 12874568
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||| ||||||| || ||||||||||||||| ||| ||||||||||||||||    
T  12874516 tctactgaagttgttattaggttgagtcacaatcagatcgctctctttaagac 12874568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 51696931 - 51697036
Alignment:
Q  139 ttttggattttcaaactgttgtattttggttttccaa---attctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaag 235  Q
    |||||||||| |||||| |||||||| | ||||| ||   ||||| || |||| | || ||| |||||||||||||||| | |||||||||||| |||||    
T  51696931 ttttggatttccaaacttttgtatttggattttcaaattcattctattatctatcaaa-ttgttactaggttgagtcacgaccaggtcgctctccttaag 51697029  T
Q  236 acgtttc 242  Q
    |||||||    
T  51697030 acgtttc 51697036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 19906228 - 19906283
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtt 240  Q
    ||||||||||||  || ||||||||||||| | ||||||||||| |||||||||||    
T  19906228 tctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgtt 19906283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 1151411 - 1151353
Alignment:
Q  190 cgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    |||||||| |||||||||||||| | | ||| || |||||||||||||||||| |||||    
T  1151411 cgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgaca 1151353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 653043 - 653079
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcg 653079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 24490028 - 24490072
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgaca 24490072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 36354176 - 36354212
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcg 36354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 36359294 - 36359330
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcg 36359330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 39999069 - 39999105
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcg 39999105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 40004027 - 40004063
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcg 40004063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 54343203 - 54343239
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcg 54343239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 54348357 - 54348393
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcg 54348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 82991 - 83106
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  82991 tgttgtttttggatttctaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 83090  T
Q  233 aagacgtttcgtgaca 248  Q
    ||||||||||||||||    
T  83091 aagacgtttcgtgaca 83106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 12045309 - 12045197
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  12045309 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 12045210  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  12045209 aagacgtttcgtg 12045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 3665854 - 3665969
Alignment:
Q  130 aactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctc 229  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |  |||||||||||    
T  3665854 aactgttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagttgttactaggttgagtcacgactaggtcgctctc 3665953  T
Q  230 tttaagacgtttcgtg 245  Q
    || |||||||||||||    
T  3665954 ttcaagacgtttcgtg 3665969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 7451684 - 7451795
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||||||||||||||||||   ||||| ||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  7451684 tgttgtttttggattttcaaactgttgtatttgaattttc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 7451782  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  7451783 aagacgtttcgtg 7451795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 12102950 - 12103062
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| | ||| ||||||||| || ||||||||||||| ||||||||||||| || | |||||||||||||||    
T  12102950 tgttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagttgttactaggttgagttacgaccaggtcgctctcttt 12103049  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  12103050 aagacgtttcgtg 12103062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 29168142 - 29168031
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  29168142 tgttgtttttggatttccaaactgttgtattt-gaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 29168044  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  29168043 aagacgtttcgtg 29168031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 39518336 - 39518447
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | |||||||||||||||    
T  39518336 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 39518434  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  39518435 aagacgtttcgtg 39518447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 42001360 - 42001471
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  42001360 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 42001458  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  42001459 aagacgtttcgtg 42001471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 36423558 - 36423672
Alignment:
Q  128 ggaactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctc 227  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||| ||| || ||||||||||||| |||||||||||||| | | ||||||||||    
T  36423558 ggaactcttgtttttggattttcaaactgttgtattt-ggatttccaaaatctattatctaccgaagttgttactaggttgagtcgcgaccaggtcgctc 36423656  T
Q  228 tctttaagacgtttcg 243  Q
    ||||||||||||||||    
T  36423657 tctttaagacgtttcg 36423672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 37652999 - 37652885
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||| || ||||||||||||| || ||||||||||||| | |||||||||||||||    
T  37652999 tgttgtttttggatttccaaattgttgtattt-ggatttccaaattctattatctaccgaagttgttattaggttgagtcacgatcaggtcgctctcttt 37652901  T
Q  233 aagacgtttcgtgaca 248  Q
    ||||||||||||||||    
T  37652900 aagacgtttcgtgaca 37652885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 37248965 - 37248853
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||| ||||||||| ||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  37248965 ctgttgtttttggatttccaaactgttatattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 37248867  T
Q  232 taagacgtttcgtg 245  Q
    |||||| |||||||    
T  37248866 taagacatttcgtg 37248853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 556621 - 556728
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  556621 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 556719  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  556720 aagacgttt 556728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 561393 - 561500
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  561393 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 561491  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  561492 aagacgttt 561500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 41996591 - 41996702
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||| |||||||||    
T  41996591 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttt 41996689  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  41996690 aagacgtttcgtg 41996702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 12502069 - 12501957
Alignment:
Q  133 tgttgtttttggattttcaaactgtt-gtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||| || ||||| ||||||| |||||||||||||||  | ||||||||||||||    
T  12502069 tgttgtttttggattttcaaactgttcgtattt-ggatttccaaattctattatctactgaagttgttactaggttgagtcatgaccaggtcgctctctt 12501971  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  12501970 taagacgtttcgtg 12501957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 39522974 - 39523086
Alignment:
Q  133 tgttgtttttggattttcaaactgtt-gtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||||||| ||||||||| |||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||    
T  39522974 tgttgtttttggatttccaaactgttagtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 39523072  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  39523073 taagacgtttcgtg 39523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 6155588 - 6155477
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||| |||||| ||| ||||||||||||||| || |||||||||||| || ||||||||| ||| |||||||||||||||| | |||||||||||||||    
T  6155588 tgttgattttggttttccaaactgttgtattt-ggatttccaaattctattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctcttt 6155490  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  6155489 aagacgtttcgtg 6155477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 26667198 - 26667309
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| ||||| |||||| |||||||| ||  ||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  26667198 tgttgtttttagatttccaaactattgtattt-ggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 26667296  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  26667297 aagacgtttcgtg 26667309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 26938795 - 26938906
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| ||||| |||||| |||||||| ||  ||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  26938795 tgttgtttttagatttccaaactattgtattt-ggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 26938893  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  26938894 aagacgtttcgtg 26938906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 36428640 - 36428742
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtattt-ggatttccaaattctattatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 36428738  T
Q  238 gttt 241  Q
    ||||    
T  36428739 gttt 36428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 41587329 - 41587215
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||  ||||||||||||||   ||||| ||||||| || ||||||||||||| |||||| ||||||||| | ||||| |||||||||    
T  41587329 tgttgtttttggatttctaaactgttgtatttgaattttc-aaattctattatctaccgaagttgttactagtttgagtcacgaccaggttgctctcttt 41587231  T
Q  233 aagacgtttcgtgaca 248  Q
    ||||||||||||||||    
T  41587230 aagacgtttcgtgaca 41587215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 6514769 - 6514659
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| ||||| |||||||||||||| || |||||||||||| || |||||| |||||| |||||||||||||||| | || ||| ||||||||    
T  6514769 tgttgtttttg-attttaaaactgttgtattt-ggatttccaaattctattatctaccaaagttgttactaggttgagtcacgaccaagtcactctcttt 6514672  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  6514671 aagacgtttcgtg 6514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 36942406 - 36942326
Alignment:
Q  162 ttttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttc 242  Q
    |||||| |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  36942406 ttttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 36942326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 36937652 - 36937572
Alignment:
Q  162 ttttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttc 242  Q
    |||||| |||||||||||| || ||||||||||||| || ||||||||||||| | |||||||||||||||||||||||||    
T  36937652 ttttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttc 36937572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 10759992 - 10759882
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattc----tgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctct 228  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||    | || ||||||||||||| |||||||||||||||| | |||||||||||    
T  10759992 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 10759894  T
Q  229 ctttaagacgttt 241  Q
     ||||||||||||    
T  10759893 -tttaagacgttt 10759882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 12042101 - 12041990
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggt--tgagtcacaaacaggtcgctctct 230  Q
    |||||||||||||||||||||||||| |   |||| ||| |||||| |||| ||||| ||||||| ||||||||  |||||||| | ||||||| |||||    
T  12042101 tgttgtttttggattttcaaactgttat---ttggattttcaaattatgttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctct 12042005  T
Q  231 ttaagacgtttcgtg 245  Q
    |||||||||||||||    
T  12042004 ttaagacgtttcgtg 12041990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 20181233 - 20181121
Alignment:
Q  133 tgttgtttttggattttc-aaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||||||||  |||| ||||||||| || |||||||||||| || ||||| ||| ||| || ||||||||||||| | |||||| |||||||    
T  20181233 tgttgtttttggattttttaaaccgttgtattt-ggatttccaaattctattatctactgaaattgttattaggttgagtcacgaccaggtcactctctt 20181135  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  20181134 taagacgtttcgtg 20181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 35680047 - 35679933
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattc----tgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctct 228  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||||||    | || |||||||||| || |||||||||||||||    |||||||||||    
T  35680047 tgttgtttttggattttcaaattgttgta-tttggatttccaaattcattatattatctaccgaagctgttactaggttgagtca-tggcaggtcgctct 35679950  T
Q  229 ctttaagacgtttcgtg 245  Q
    |||||||||||||||||    
T  35679949 ctttaagacgtttcgtg 35679933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 37550170 - 37550091
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcac 214  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||||||||||| || |||||||||||||    
T  37550170 tgttgtttttggattttcaaattgttgta-tttggatttccaaattctattatctaccgaagttg-tattaggttgagtcac 37550091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 40147828 - 40147932
Alignment:
Q  140 tttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgt 239  Q
    |||| |||| |||||| |||||||| || |||||||||||| || |||| |||||||| || ||||||||||||  | ||||||||||||||||||| ||    
T  40147828 tttgaatttccaaactattgtattt-ggatttccaaattctattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgt 40147926  T
Q  240 ttcgtg 245  Q
    ||||||    
T  40147927 ttcgtg 40147932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 11981443 - 11981340
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttga-gtcacaaacaggtcgctctctttaaga 236  Q
    |||||||||||||||||||||||| || || |||||||||||| || ||||||||||||| |||||||||||  | |  | ||||||||| |||||||||    
T  11981443 tttttggattttcaaactgttgtagtt-ggatttccaaattctattatctaccgaagttgttactaggttgattttatgaccaggtcgctttctttaaga 11981345  T
Q  237 cgttt 241  Q
    |||||    
T  11981344 cgttt 11981340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 12102949 - 12102897
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  12102949 tctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagac 12102897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 14374132 - 14374171
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 14374171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 13582785 - 13582749
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcg 13582749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 24435964 - 24435928
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcg 24435928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 32461647 - 32461611
Alignment:
Q  205 gttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    |||||||||| | ||||||||||||||||||||||||    
T  32461647 gttgagtcacgaccaggtcgctctctttaagacgttt 32461611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 23192986 - 23192875
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  23192986 tgttgtttttggattttcaaactgttgtgttt-ggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 23192888  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  23192887 aagacgtttcgtg 23192875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 25855097 - 25855208
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  25855097 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 25855195  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  25855196 aagacgtttcgtg 25855208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 3094045 - 3094148
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  3094045 tttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 3094143  T
Q  238 gtttc 242  Q
    |||||    
T  3094144 gtttc 3094148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 16649781 - 16649674
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||| || ||||||||||||| ||||| |||||||||| | |||||||||||||||    
T  16649781 tgttgtttttggattttcaaactgttgtattt-gaatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctctcttt 16649683  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  16649682 aagacgttt 16649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 19799182 - 19799071
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||| || |||| |||||||| |||||||||||||||| | ||| |||||||||||    
T  19799182 tgttgtttttggattttcaaactgttgtatttggattttc-aaattctattatctatcgaagttgttactaggttgagtcacgatcagatcgctctcttt 19799084  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  19799083 aagacgtttcgtg 19799071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 18784716 - 18784607
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| ||||||| |||||||| |||||||||||||||| | ||||||||||| |||||    
T  18784716 ttgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaa 18784618  T
Q  235 gacgtttcgtg 245  Q
    ||| |||||||    
T  18784617 gacatttcgtg 18784607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 47455556 - 47455444
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||||||| || ||||||||||||| | ||||||||||||||    
T  47455556 ctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttattaggttgagtcacgaccaggtcgctctctt 47455458  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  47455457 taagacgtttcgtg 47455444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 26927891 - 26927780
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||||||||| | ||||  ||||||| || ||||||||||||| |||||||||||||||| |  | ||||||||||||    
T  26927891 tgttgtttttggattttcaaactgttgtatttggattttt-aaattctattatctaccgaagttgttactaggttgagtcacgactaagtcgctctcttt 26927793  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  26927792 aagacgtttcgtg 26927780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 40165906 - 40166017
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| ||||||||||||||||||||| || || ||| ||||| || ||||||||||||| |||||||||||||||| | || ||||||||||||    
T  40165906 tgttgtttttagattttcaaactgttgtattt-ggattaccatattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctctcttt 40166004  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  40166005 aagacgtttcgtg 40166017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 10135382 - 10135493
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||  ||||||| || ||||||| |||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  10135382 tgttgtttttgtatttccaaactcctgtattt-ggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 10135480  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  10135481 aagacgtttcgtg 10135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 51041630 - 51041520
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||| ||||||| || |||||||||||| || ||||||||||||| ||||| |||||||||| | ||||||||||| |||    
T  51041630 tgttgtttttggatttccaaactgatgtattt-ggatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctct-ttt 51041533  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  51041532 aagacgtttcgtg 51041520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 47451394 - 47451286
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||| ||  |||||||||||||||| | |||||||||||||||    
T  47451394 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaaattattactaggttgagtcacgaccaggtcgctctcttt 47451296  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  47451295 aagacgtttc 47451286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 33301349 - 33301238
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||| ||||||||||| || |||||||||||| || |||| | |||||| |||||| |||| |||| | ||||||| |||||||    
T  33301349 tgttgtttttggatttccaatctgttgtattt-ggatttccaaattctattatctatcaaagttgttactagcttgaatcacgaccaggtcgttctcttt 33301251  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  33301250 aagacgtttcgtg 33301238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 39588536 - 39588425
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||  ||||||||| || |||||||||| | || || |||||| ||| ||||||||| |||||| | |||||||||||||||    
T  39588536 tgttgtttttggatttccaaatagttgtattt-ggatttccaaattatattatccaccgaaattgttactaggttaagtcacgatcaggtcgctctcttt 39588438  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  39588437 aagacgtttcgtg 39588425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 16832027 - 16832141
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||| ||||||||| ||||| ||||||||| || |||||||||||| || |||||  |||||| |||||  ||||||||| | |||||||||||||||    
T  16832027 tgttgtatttggatttccaaaccgttgtattt-ggatttccaaattctattatctacttaagttgttactatattgagtcacgaccaggtcgctctcttt 16832125  T
Q  233 aagacgtttcgtgaca 248  Q
    |||||||| |||||||    
T  16832126 aagacgttccgtgaca 16832141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 25843738 - 25843818
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcac 214  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| ||||||||||||||||    
T  25843738 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcac 25843818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 38620624 - 38620730
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    |||||| |||||||||||||||||||| || |||||||||| | || ||||||||||||  || ||||||||||| | | ||| || |||||||||||||    
T  38620624 tttttgaattttcaaactgttgtattt-ggatttccaaattttattatctaccgaagttattattaggttgagtcgcgaccagatcactctctttaagac 38620722  T
Q  238 gtttcgtg 245  Q
    ||||||||    
T  38620723 gtttcgtg 38620730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 10140066 - 10140126
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||||    
T  10140066 tctaccgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtg 10140126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 11806336 - 11806399
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    |||| |||||||| || ||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  11806336 tctatcgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgaca 11806399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 16035528 - 16035645
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgt------tttctaccgaagttgatactaggttgagtcacaaacaggtcgct 226  Q
    |||||||||||||||| ||||||||||||||| | ||||| |||||||        | |||||| |||||| |||||||||||||||| | ||||||||     
T  16035528 tgttgtttttggatttccaaactgttgtatttggattttc-aaattctaaaatgaatatctaccaaagttgttactaggttgagtcacgaccaggtcgcc 16035626  T
Q  227 ctctttaagacgtttcgtg 245  Q
    |||||||| ||||||||||    
T  16035627 ctctttaacacgtttcgtg 16035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 2493922 - 2493875
Alignment:
Q  199 tactaggttgagtcacaaac-aggtcgctctctttaagacgtttcgtg 245  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2493922 tactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtg 2493875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 8900231 - 8900294
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||||| |||||||||||||||| | ||  ||||||||||||| |||||| ||||||    
T  8900231 tctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgaca 8900294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 12259973 - 12260036
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||| ||||||| |||| ||||||| ||| | || ||||||||||||||||||||||||||||    
T  12259973 tctactgaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgaca 12260036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 10106100 - 10106139
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 10106139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 38734272 - 38734311
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 38734311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 13890810 - 13890847
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttt 13890847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 33381004 - 33380975
Alignment:
Q  219 aggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||||||||||||||||||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgaca 33380975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 19422981 - 19422937
Alignment:
Q  199 tactaggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||| ||||||||||| | ||| ||||||||||||||||||||||    
T  19422981 tactgggttgagtcacgatcagatcgctctctttaagacgtttcg 19422937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 36684810 - 36684774
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcg 36684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 46696596 - 46696647
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    |||||||||||||||||||||||||| || ||| | |||||||||||| ||||    
T  46696596 tgttgtttttggattttcaaactgtttta-tttagatttccaaattctatttt 46696647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 7027 - 7141
Alignment:
Q  130 aactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctc 229  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||    
T  7027 aactgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 7125  T
Q  230 tttaagacgtttcgtg 245  Q
    ||||||||||||||||    
T  7126 tttaagacgtttcgtg 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 39775898 - 39775786
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  39775898 ctgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgctactaggttgagtcacgaccaggtcgctctctt 39775800  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  39775799 taagacgtttcgtg 39775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 7571387 - 7571276
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  7571387 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 7571289  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  7571288 aagacgtttcgtg 7571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 3672510 - 3672618
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  3672510 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 3672608  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  3672609 aagacgtttc 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 3692542 - 3692650
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  3692542 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 3692640  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  3692641 aagacgtttc 3692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 23666292 - 23666181
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  23666292 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 23666194  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  23666193 aagacgtttcgtg 23666181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 24038540 - 24038429
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  24038540 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 24038442  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  24038441 aagacgtttcgtg 24038429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 29350161 - 29350275
Alignment:
Q  130 aactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctc 229  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | || |||||| ||    
T  29350161 aactgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctttc 29350259  T
Q  230 tttaagacgtttcgtg 245  Q
    ||||||||||||||||    
T  29350260 tttaagacgtttcgtg 29350275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 8069603 - 8069715
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttt-tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| ||| ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  8069603 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctatttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 8069701  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  8069702 taagacgtttcgtg 8069715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 245
Target Start/End: Complemental strand, 758532 - 758426
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||| ||||||||||||||||    
T  758532 tttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagac 758434  T
Q  238 gtttcgtg 245  Q
    ||||||||    
T  758433 gtttcgtg 758426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 3418918 - 3419030
Alignment:
Q  133 tgttgtttttgg-attttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | || |||||||||||    
T  3418918 tgttgtttttggtatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctctt 3419016  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  3419017 taagacgtttcgtg 3419030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 3033573 - 3033676
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| |||||||| |||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 3033671  T
Q  238 gtttc 242  Q
    |||||    
T  3033672 gtttc 3033676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 8883094 - 8883205
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||| |||||||||| ||||||||||||||| | ||||| ||||||| || ||||||||||||| |||||||| ||||||| | |||||||||||||||    
T  8883094 tgttgattttggatttccaaactgttgtatttggattttc-aaattctattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctcttt 8883192  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  8883193 aagacgtttcgtg 8883205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 8887854 - 8887961
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||| |||||||||| ||||||||||||||| |  |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  8887854 tgttgattttggatttccaaactgttgtattt-gaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8887952  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  8887953 aagacgttt 8887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 14438864 - 14438753
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||  ||||||||||||||| || ||||||| |||| || ||||||||||||| |||||||||||||||| | |||||||| ||||||    
T  14438864 tgttgtttttggattcccaaactgttgtattt-ggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 14438766  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  14438765 aagacgtttcgtg 14438753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 18467149 - 18467260
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||| ||||||| | ||||| ||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  18467149 tgttgtttttgaatttccaaactgatgtatttggattttc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 18467247  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  18467248 aagacgtttcgtg 18467260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 20519978 - 20520089
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||| | |||||||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | |||||| ||||||||    
T  20519978 tgttgttttcgaattttcaaactgttgtattt-ggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcactctcttt 20520076  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  20520077 aagacgtttcgtg 20520089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 27708800 - 27708913
Alignment:
Q  130 aactgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctc 229  Q
    |||||||||||||| |||| ||||||||||||||| || |||||||||||| || | ||||||||||| |||||||||||||||| | ||||||| ||||    
T  27708800 aactgttgtttttg-atttccaaactgttgtattt-ggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgttctc 27708897  T
Q  230 tttaagacgtttcgtg 245  Q
    ||||||||||||||||    
T  27708898 tttaagacgtttcgtg 27708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 12966040 - 12965935
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    ||||||||| |||||||||| ||||||||| ||||| ||||||||| |  ||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  12966040 ttgtttttgaattttcaaaccgttgtatttgggttt-ccaaattctatgatctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaa 12965942  T
Q  235 gacgttt 241  Q
    |||||||    
T  12965941 gacgttt 12965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 49971591 - 49971482
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||||||| ||||||||||||||| || ||||||| || | || ||||||||||||| |||||||||||||||| | ||||||| |||||||||    
T  49971591 ttgtttttggatttccaaactgttgtattt-ggatttccaagttttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctctttaa 49971493  T
Q  235 gacgtttcgtg 245  Q
    |||||||||||    
T  49971492 gacgtttcgtg 49971482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 29715570 - 29715682
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||||||| ||||||||||||||| | ||| ||||||||| || ||||||||||||| || ||||||||||||| | ||| ||||||| |||||    
T  29715570 ttgtttttggatttccaaactgttgtatttagattt-ccaaattctattatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaa 29715668  T
Q  235 gacgtttcgtgaca 248  Q
    ||||||||||||||    
T  29715669 gacgtttcgtgaca 29715682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 55431242 - 55431353
Alignment:
Q  136 tgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaag 235  Q
    ||||||||||||| ||||| ||||||||| || |||||||||||| || ||| | ||||||| || ||||||||||||| | ||||||||||||||||||    
T  55431242 tgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctgctgaagttgttattaggttgagtcacgatcaggtcgctctctttaag 55431340  T
Q  236 acgtttcgtgaca 248  Q
    |||||||||||||    
T  55431341 acgtttcgtgaca 55431353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 3657409 - 3657298
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||| ||||||||||||||||||||||||| |  |||| ||||||| || ||||||||||||| ||||| |||||||||| |  || |||||||||||    
T  3657409 tgttgtgtttggattttcaaactgttgtattt-gaatttctaaattctattatctaccgaagttgttactatgttgagtcacgattagatcgctctcttt 3657311  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  3657310 aagacgtttcgtg 3657298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 23661619 - 23661527
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgct 226  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||    
T  23661619 tgttgtttttgaatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgct 23661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 18471932 - 18472031
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| ||||  |||||| ||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  18471932 tgttgtttttgaatttctaaactgatgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 18472030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 2207876 - 2207769
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||| ||||||||||||||   ||||  ||||||| || | || ||||||||  ||||| ||||||||| | ||||||||||| |||    
T  2207876 tgttgtttttggatttttaaactgttgtatttgaattttt-aaattctattatttatcgaagttgtcactagattgagtcacgaccaggtcgctcttttt 2207778  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  2207777 aagacgttt 2207769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 12112759 - 12112699
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| ||||||||||| |||| |  |||||||||||||||||||||||||||    
T  12112759 tctaccgaagttgttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtg 12112699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 32474819 - 32474738
Alignment:
Q  162 ttttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||| |||||||||||| || ||||||||||||| |||||| ||||| ||| | ||||||||||||  ||||||||||||||    
T  32474819 ttttggatttccaaattctattatctaccgaagttgttactagattgagccacgaccaggtcgctctc--taagacgtttcgtg 32474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 12971751 - 12971691
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||| |||||||| ||||||||||| |||| | |||||| |||||||||||||||||||||    
T  12971751 tctatcgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtg 12971691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 6606827 - 6606772
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttcta 188  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| | |||||||    
T  6606827 tgttgtttttggattcccaaactgatgtattttggttttccaaattatattttcta 6606772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 25726897 - 25726853
Alignment:
Q  199 tactaggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcg 25726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 33089441 - 33089402
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 33089402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 53119524 - 53119563
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcg 53119563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 26962051 - 26962097
Alignment:
Q  199 tactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||| ||||||||||| | ||| ||||||||||||||||||||||||    
T  26962051 tactgggttgagtcacgaccagatcgctctctttaagacgtttcgtg 26962097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 28125030 - 28125080
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    |||||||| ||||| |||| |||||||||||||||||| ||||||| ||||    
T  28125030 ttgtttttagatttccaaagtgttgtattttggttttctaaattctatttt 28125080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 48435911 - 48435882
Alignment:
Q  219 aggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||||||||||||||||||||||    
T  48435911 aggtcgctctctttaagacgtttcgtgaca 48435882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 15763125 - 15763089
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcg 15763089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 15768286 - 15768250
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  15768286 tgagtcacgaccaggtcgctctctttaagacgtttcg 15768250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 17026291 - 17026255
Alignment:
Q  128 ggaactgttgtttttggattttcaaactgttgtattt 164  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  17026291 ggaactgttgttttaggatttttaaactgttgtattt 17026255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 20090757 - 20090721
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcg 20090721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 20095882 - 20095846
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcg 20095846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 1935163 - 1935051
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  1935163 ctgttgtttttgaattttcaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 1935065  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  1935064 taagacgtttcgtg 1935051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 19892635 - 19892527
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  19892635 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 19892537  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  19892536 aagacgtttc 19892527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 9189972 - 9189861
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||| |||||||||    
T  9189972 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttt 9189874  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  9189873 aagacgtttcgtg 9189861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 30650855 - 30650966
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||| |||||||||||    
T  30650855 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctcttt 30650953  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  30650954 aagacgtttcgtg 30650966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 25478470 - 25478352
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattc----tgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctct 228  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    | || ||||||||||||| |||||||||||||||||| |||||||||||    
T  25478470 tgttgtttttggattttcaaactattgtattt-ggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctct 25478372  T
Q  229 ctttaagacgtttcgtgaca 248  Q
    ||||||||||||||||||||    
T  25478371 ctttaagacgtttcgtgaca 25478352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 28603230 - 28603338
Alignment:
Q  139 ttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacg 238  Q
    |||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||||| |||    
T  28603230 ttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacg 28603328  T
Q  239 tttcgtgaca 248  Q
    ||||||||||    
T  28603329 tttcgtgaca 28603338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 9180893 - 9180782
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| |||| ||||||||||||||| | ||||| ||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  9180893 tgttgtttttgaatttccaaactgttgtatttggattttc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 9180795  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  9180794 aagacgtttcgtg 9180782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 10160893 - 10160782
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||||| |||||||| || |||| ||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  10160893 tgttgtttttggatttccaaactcttgtattt-ggatttctaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 10160795  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  10160794 aagacgtttcgtg 10160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 18344357 - 18344468
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| | ||||| ||||||| || || |||||||||| |||||| ||||||||| | |||||||||||||||    
T  18344357 tgttgtttttggatttccaaactgttgtatttggattttc-aaattctattatcaaccgaagttgttactagattgagtcacgaccaggtcgctctcttt 18344455  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  18344456 aagacgtttcgtg 18344468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 30658189 - 30658300
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| |  ||||||| |||| || ||||||||||||| ||||| |||||||||| | |||||||||||||||    
T  30658189 tgttgtttttggatttccaaactgttgtattt-gcatttccaagttctattatctaccgaagttgttactatgttgagtcacgaccaggtcgctctcttt 30658287  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  30658288 aagacgtttcgtg 30658300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 31326665 - 31326773
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||| ||||||| || |  |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  31326665 tgttgtttttggatttccaaaatgttgtaatt-gaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 31326763  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  31326764 aagacgtttc 31326773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 35601848 - 35601959
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||||| |||||||| | ||||| ||||||| || ||||||||||||| ||||||||||| |||| | ||||||||||| |||    
T  35601848 tgttgtttttggatttccaaactattgtatttggattttc-aaattctattatctaccgaagttgttactaggttgaatcacgaccaggtcgctcttttt 35601946  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  35601947 aagacgtttcgtg 35601959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 42926929 - 42926827
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||| ||||||||||    
T  42926929 tgttgtttttggattttcaaactgtt-tattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggccgctctcttt 42926832  T
Q  233 aagac 237  Q
    |||||    
T  42926831 aagac 42926827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 29677694 - 29677796
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | |||||||||||| ||    
T  29677694 tgttgtttttggattt-caaactgttgtattt-ggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcatt 29677791  T
Q  233 aagac 237  Q
    |||||    
T  29677792 aagac 29677796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 30631505 - 30631616
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || ||||||| |||| || ||||||||||||| |||||||||||||||| |  ||||| ||||||||    
T  30631505 tgttgtttttggatttccaaactgttgtattt-ggatttccaagttctattatctaccgaagttgttactaggttgagtcacgattaggtcactctcttt 30631603  T
Q  233 aagacgtttcgtg 245  Q
    || || |||||||    
T  30631604 aaaacttttcgtg 30631616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 35639166 - 35639055
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||||| |||||||| | ||||| ||||||| || ||||||||||||| ||||| ||||| |||| | ||||||||||| |||    
T  35639166 tgttgtttttggatttccaaactattgtatttggattttc-aaattctattatctaccgaagttgttactaagttgaatcacgatcaggtcgctcttttt 35639068  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  35639067 aagacgtttcgtg 35639055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 25497498 - 25497384
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaa---attctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctc 229  Q
    |||||||||||||||| |||||| |||||||| | ||| | ||   ||||| || ||||||||| ||| |||||||||||||||| | ||||||||||||    
T  25497498 tgttgtttttggatttccaaactattgtatttagatttccaaactcattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctc 25497399  T
Q  230 tttaagacgtttcgt 244  Q
    |||||||||||||||    
T  25497398 tttaagacgtttcgt 25497384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 29677308 - 29677418
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||| ||||||||||| |||||||||||||||   ||||| ||||||| || |||| |||||||| |||||||||||||||| | || ||||||||||||    
T  29677308 tgttatttttggattt-caaactgttgtatttgaattttc-aaattctattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctcttt 29677405  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  29677406 aagacgtttcgtg 29677418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 12796851 - 12796958
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| || ||||||||||||   ||||| ||||||| || ||| ||||||||| || ||||||||||||| | ||| |||||||||||    
T  12796851 tgttgtttttggatttccacactgttgtatttgaattttc-aaattctattatctgccgaagttgttattaggttgagtcacgaccagatcgctctcttt 12796949  T
Q  233 aagacgttt 241  Q
    |||||||||    
T  12796950 aagacgttt 12796958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 7738020 - 7737913
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||| ||||||||||  | |||||||||||| | ||||| ||||||| || || |||||||||| |||||||||||||||| | || ||||||||||||    
T  7738020 tgttgattttggatttctatactgttgtatttggattttc-aaattctattatccaccgaagttgttactaggttgagtcacgaccatgtcgctctcttt 7737922  T
Q  233 aagacgttt 241  Q
    |||| ||||    
T  7737921 aagaagttt 7737913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 20711358 - 20711410
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20711358 tgttgtttttggatttacaaactgttgtattttggttttccaaattctatttt 20711410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19578532 - 19578476
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||||| || ||||||||||||| | ||| ||||||||||||||||||||    
T  19578532 tctaccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttt 19578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 15489883 - 15489803
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcac 214  Q
    |||||||||||||||| |||  |||||||||    ||||| ||||||| || ||||||||||||| ||||||||||||||||    
T  15489883 tgttgtttttggatttccaatatgttgtattagaattttc-aaattctattatctaccgaagttgttactaggttgagtcac 15489803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19094613 - 19094557
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||||| || ||||||||||||| | |||||||||||| |||| ||||||    
T  19094613 tctaccgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttt 19094557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 40847712 - 40847657
Alignment:
Q  186 ctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    |||||||||||| |||||| ||||||||| | || |||| ||||||||||||||||    
T  40847712 ctaccgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttt 40847657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 40847779 - 40847735
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaatt 178  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||    
T  40847779 tgttgtttttagattttcaaactgttgta-tttggatttccaaatt 40847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 17545417 - 17545353
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctct-ttaagacgtttcgtgaca 248  Q
    ||||||||||||| ||||||||||||| || | ||||||| | | | ||||||||||||||||||    
T  17545417 tctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgaca 17545353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 39542900 - 39542936
Alignment:
Q  206 ttgagtcacaaacaggtcgctctctttaagacgtttc 242  Q
    ||||||||| | |||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttc 39542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 42723546 - 42723510
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcg 42723510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 42728715 - 42728679
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcg 42728679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 44096302 - 44096338
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcg 44096338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 44754691 - 44754655
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcg 44754655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 44759857 - 44759821
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcg 44759821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 40130855 - 40130744
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  40130855 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 40130757  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  40130756 aagacgtttcgtg 40130744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 17025861 - 17025972
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| |||||||||| |||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  17025861 tgttgtttttagattttcaaattgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 17025959  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  17025960 aagacgtttcgtg 17025972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 17556353 - 17556464
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||| |||||||||| |||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  17556353 tgttgtttttagattttcaaattgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 17556451  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  17556452 aagacgtttcgtg 17556464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 33416472 - 33416584
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||| ||||||||||||||| |  |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  33416472 ctgttgtttttggatttccaaactgttgtattt-gaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcggtctctt 33416570  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  33416571 taagacgtttcgtg 33416584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 31450035 - 31449924
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | |||||||||||||||    
T  31450035 tgttgtttttggatttccaaagtgttgtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 31449937  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  31449936 aagacgtttcgtg 31449924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 1807398 - 1807512
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||||||||||||| ||||||||||   |||||||| |||| || ||||||||||||| |||||||||||||||| |  ||||||||||||||    
T  1807398 tgttgtttttggattttcaaattgttgtatttgaattttccaa-ttctattatctaccgaagttgttactaggttgagtcacgactaggtcgctctcttt 1807496  T
Q  233 aagacgtttcgtgaca 248  Q
    ||||||||||||||||    
T  1807497 aagacgtttcgtgaca 1807512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 4238479 - 4238376
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||||| ||    
T  4238479 tttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaacac 4238381  T
Q  238 gtttc 242  Q
    |||||    
T  4238380 gtttc 4238376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 44926093 - 44925981
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||| ||||| ||||||| ||||||| | ||||| ||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  44926093 ctgttgttttttgatttccaaactgctgtatttggattttc-aaattcttttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 44925995  T
Q  232 taagacgtttcgtg 245  Q
    ||| ||||||||||    
T  44925994 taaaacgtttcgtg 44925981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 1911138 - 1911027
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| | ||||| ||||||| || |||| |||||||| || |||||| |||||| | |||||||||||||||    
T  1911138 tgttgtttttggatttccaaactgttgtatttggattttc-aaattctattatctatcgaagttgttattaggttaagtcacgatcaggtcgctctcttt 1911040  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  1911039 aagacgtttcgtg 1911027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 4243218 - 4243115
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||| ||||||||||||||| || |||||||||||| || |||| |||||||| |||||||||||||||| | ||||||||||||||||| ||    
T  4243218 tttttggatttccaaactgttgtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacac 4243120  T
Q  238 gtttc 242  Q
    |||||    
T  4243119 gtttc 4243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 18876535 - 18876425
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||| ||||||| || |||||||||||| || | ||||||||||| |||||||||||||||| | ||||||||||| |||    
T  18876535 tgttgtttttggatttccaaactgctgtattt-ggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-ttt 18876438  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  18876437 aagacgtttcgtg 18876425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 38182405 - 38182295
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    ||||||||||| ||| |||||||||||||||| || |||||||||||| || ||||||||||||| ||| |||||||||||| | |||||||||||||||    
T  38182405 tgttgtttttgaattgtcaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttac-aggttgagtcacgaccaggtcgctctcttt 38182308  T
Q  233 aagacgtttcgtg 245  Q
    || ||||||||||    
T  38182307 aaaacgtttcgtg 38182295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 34118392 - 34118500
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||  ||||||| | ||| ||||||||| || ||||| ||||||| |||||||||||||||| | |||||||||||||||    
T  34118392 tgttgtttttggatttccaaactaatgtatttagattt-ccaaattctattatctactgaagttgttactaggttgagtcacgaccaggtcgctctcttt 34118490  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  34118491 aagacgtttc 34118500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 28559821 - 28559712
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||||||| ||||||||||||||| || |||  ||||| | || ||||||||||||| |||||||||||||||| |  | |||||||||| |||    
T  28559821 ttgtttttggatttccaaactgttgtattt-ggatttataaattatattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataa 28559723  T
Q  235 gacgtttcgtg 245  Q
    |||||||||||    
T  28559722 gacgtttcgtg 28559712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 19915073 - 19915153
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcac 214  Q
    |||||||||||||||| ||||||||||||||| |  |||||||||||| || ||||||||||||| ||||||||||||||||    
T  19915073 tgttgtttttggatttacaaactgttgtattt-gtatttccaaattctattatctaccgaagttgttactaggttgagtcac 19915153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 24090604 - 24090664
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  24090604 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 24090664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 19166611 - 19166671
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||    
T  19166611 tctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtg 19166671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 23548750 - 23548690
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| |||||||||||||||| | | ||||||||||| ||||||||||||||    
T  23548750 tctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtg 23548690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 40125999 - 40125943
Alignment:
Q  189 ccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  40125999 ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtg 40125943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 17953991 - 17953931
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||||| ||||||||||||| || | || |||||| ||||||||||||||||||    
T  17953991 tctaccgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtg 17953931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 36683556 - 36683616
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||| ||||| |||||||||||||||  |  |||||||||||||||||||||||||||    
T  36683556 tctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtg 36683616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 31030525 - 31030569
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||| | |||||||||||||||||||||||||| ||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgaca 31030569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19430011 - 19430050
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 19430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19435513 - 19435552
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 19435552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19566160 - 19566199
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 19566199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19571662 - 19571701
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 19571701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 24673438 - 24673380
Alignment:
Q  190 cgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    |||||||| ||||||||||||| || | ||| ||||||| ||||| |||||||||||||    
T  24673438 cgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgaca 24673380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 32015700 - 32015738
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtg 32015738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 33616823 - 33616786
Alignment:
Q  206 ttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcg 33616786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Complemental strand, 43302880 - 43302851
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtat 162  Q
    ||||||||||||||||||||||||||||||    
T  43302880 tgttgtttttggattttcaaactgttgtat 43302851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 2355586 - 2355514
Alignment:
Q  176 attctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||| || |||||| |||||| |||||| ||||||||| | ||  || |||| |||||||||||||||||||    
T  2355586 attctattatctaccaaagttgttactagattgagtcaccaccatatcactctttttaagacgtttcgtgaca 2355514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 13584346 - 13584386
Alignment:
Q  203 aggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||| |||| | ||||||||||||||||||||||||||    
T  13584346 aggttgaatcacgaccaggtcgctctctttaagacgtttcg 13584386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 15875786 - 15875726
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    |||| |||||||| |||||  |||||| || | |||||||||||||||| |||||||||||    
T  15875786 tctatcgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtg 15875726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 3999 - 4111
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  3999 ctgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 4097  T
Q  232 taagacgtttcgtg 245  Q
    |||||| |||||||    
T  4098 taagacatttcgtg 4111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 444101 - 444021
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcac 214  Q
    ||||||||||||||||| ||||| ||||| ||||  ||| |||||||| || | ||||||||||| ||||||||||| ||||    
T  444101 tgttgtttttggatttttaaactcttgta-tttgtattttcaaattctattatttaccgaagttgttactaggttgaatcac 444021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 10056 - 9945
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||    
T  10056 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 9958  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  9957 aagacgtttcgtg 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 6408029 - 6407918
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| | ||||||||||||||     
T  6408029 tgttgtttttggatttccaaactgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttg 6407931  T
Q  233 aagacgtttcgtg 245  Q
    |||||||||||||    
T  6407930 aagacgtttcgtg 6407918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 11534848 - 11534734
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||| || ||||| ||||||| |||||||||||||||  | ||||||||||||||    
T  11534848 ctgttgtttttggattttcaaactgttgtattt-ggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctctt 11534750  T
Q  232 taagacgtttcgtgac 247  Q
    ||||||||||||||||    
T  11534749 taagacgtttcgtgac 11534734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 11560358 - 11560244
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||| || ||||| ||||||| |||||||||||||||  | ||||||||||||||    
T  11560358 ctgttgtttttggattttcaaactgttgtattt-ggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctctt 11560260  T
Q  232 taagacgtttcgtgac 247  Q
    ||||||||||||||||    
T  11560259 taagacgtttcgtgac 11560244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 11570906 - 11570807
Alignment:
Q  145 attttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgt 244  Q
    |||||||||||||||||||| || |||| ||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  11570906 attttcaaactgttgtattt-ggatttcgaaattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgt 11570808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 8747708 - 8747822
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| || ||||  ||||||| |||||||||||||||| | |||||||||||||||    
T  8747708 tgttgtttttggatttacaaactgttgtattt-ggatttccaaattctattatctattgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8747806  T
Q  233 aagacgtttcgtgaca 248  Q
    |||||||| |||||||    
T  8747807 aagacgttccgtgaca 8747822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 19674237 - 19674347
Alignment:
Q  131 actgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctct 230  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||| || | ||||||||||| |||||||||||||||| | |||||| ||||||    
T  19674237 actgttgtttttggattttcaaactgttgtatttggattttc-aaattctattatttaccgaagttgttactaggttgagtcacgaccaggtcactctct 19674335  T
Q  231 ttaagacgtttc 242  Q
    ||||||||||||    
T  19674336 ttaagacgtttc 19674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 12688899 - 12689009
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaa 234  Q
    |||||||||||||||||||||||||||||| || |||||||||||| || || |||||||||| |||||||||||||||  | |||||| ||||||||||    
T  12688899 ttgtttttggattttcaaactgttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaa 12688997  T
Q  235 gacgtttcgtga 246  Q
    ||||||| ||||    
T  12688998 gacgttttgtga 12689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 33687774 - 33687661
Alignment:
Q  131 actgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctct 230  Q
    |||||||||||||||||| ||||||||||||||| | ||||  ||||| |||| ||||||||| ||| || |||||||||| || | |||||||||||||    
T  33687774 actgttgtttttggatttccaaactgttgtatttggattttt-aaattttgttatctaccgaaattgttattaggttgagttaccaccaggtcgctctct 33687676  T
Q  231 ttaagacgtttcgtg 245  Q
    |||||||||||||||    
T  33687675 ttaagacgtttcgtg 33687661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 245
Target Start/End: Complemental strand, 2700276 - 2700164
Alignment:
Q  133 tgttgtttttggattttcaaactgtt-gtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctt 231  Q
    ||||||||||| |||||||||| ||| |||||| | ||||| |||||||  | ||||||||||||| |||||||||||||||| | ||| ||||||||||    
T  2700276 tgttgtttttgaattttcaaaccgttagtatttggattttc-aaattctactatctaccgaagttgttactaggttgagtcacgaccagatcgctctctt 2700178  T
Q  232 taagacgtttcgtg 245  Q
    ||||||||||||||    
T  2700177 taagacgtttcgtg 2700164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 21308960 - 21309065
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||||||||||||||||||||||     ||||| |||||||||||| || |||| |||||||| |||||||||||||||| | ||  |||||||||||    
T  21308960 tgttgtttttggattttcaaactgta----tttggatttccaaattctattatctatcgaagttgttactaggttgagtcactaccatatcgctctcttt 21309055  T
Q  233 aagacgtttc 242  Q
    ||||||||||    
T  21309056 aagacgtttc 21309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 11427975 - 11428080
Alignment:
Q  139 ttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacg 238  Q
    |||||||||| |||||| |||||||| | ||||| ||||| | || | ||||||||||| || ||| ||||||||| | |||||||||||||||||||||    
T  11427975 ttttggatttccaaactattgtatttggattttc-aaattttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacg 11428073  T
Q  239 tttcgtg 245  Q
    |||||||    
T  11428074 tttcgtg 11428080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 2760425 - 2760379
Alignment:
Q  132 ctgttgtttttggattttcaaactgttgtattttggttttccaaatt 178  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  2760425 ctgttgtttttggatttccaaacagttgtattttggttttccaaatt 2760379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 12406469 - 12406411
Alignment:
Q  187 taccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||| |||||||||||||    
T  12406469 taccgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtg 12406411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 17964696 - 17964636
Alignment:
Q  136 tgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttg 197  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||| || |||||||||||||    
T  17964696 tgtttttggatttccaaactgttgta-tttggatttccaaattctattatctaccgaagttg 17964636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 24589342 - 24589219
Alignment:
Q  138 tttttggattttcaaactgttgtattttggttttccaaattctgttt-------------tctaccgaagttgatactaggttgagtcacaaacaggtcg 224  Q
    |||||||||||| |||| ||||||||||||||||| ||||||| |||             |||| |||||||| ||||| |||||||||| | ||| |||    
T  24589342 tttttggattttaaaacggttgtattttggttttcgaaattctattttctaaagagaacatctatcgaagttgttactaagttgagtcacgatcagatcg 24589243  T
Q  225 ctctctttaagacgtttcgtgaca 248  Q
    |||||||||| |||||||||||||    
T  24589242 ctctctttaaaacgtttcgtgaca 24589219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 13736794 - 13736736
Alignment:
Q  187 taccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgtttcgtg 245  Q
    ||||||||||| |||||||||||||| | | |||||| ||||||||| |||||||||||    
T  13736794 taccgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtg 13736736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 20748464 - 20748414
Alignment:
Q  135 ttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||| ||||    
T  20748464 ttgtttttggatttctaaattgttgtattttggttttccaaattctatttt 20748414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 2863570 - 2863518
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||| ||||||| |||||||||||||||| | || |||||||||||||||||    
T  2863570 tctactgaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 12183100 - 12183060
Alignment:
Q  203 aggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcg 12183060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 29892379 - 29892323
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    |||| |||||||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  29892379 tctatcgaagttgttactaggttgagtcacggtcaggtcgctctctttaagaagttt 29892323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19478145 - 19478184
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 19478184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 12406531 - 12406493
Alignment:
Q  134 gttgtttttggattttcaaactgttgtattttggttttc 172  Q
    ||||||||||||||||||||||||||||||| | |||||    
T  12406531 gttgtttttggattttcaaactgttgtatttggattttc 12406493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 3901909 - 3901946
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgttt 241  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttt 3901946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 5601072 - 5601027
Alignment:
Q  203 aggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    |||||||||||| | ||||||||| |||||||||||||||| ||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgaca 5601027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 22698338 - 22698302
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcg 22698302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 25325 - 25439
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||||| ||||||||||||||||| ||||||| || |||||||||||| || |||| |||||||| ||||||||||||||||||  ||||| ||||||||    
T  25325 tgttgtctttggattttcaaactgctgtattt-ggatttccaaattctattatctatcgaagttgttactaggttgagtcacaattaggtcactctcttt 25423  T
Q  233 aagacgtttcgtgaca 248  Q
    |||||||| |||||||    
T  25424 aagacgttacgtgaca 25439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 35560 - 35674
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgatactaggttgagtcacaaacaggtcgctctcttt 232  Q
    |||| |||||| |||||||||||||||||||| || |||||||||||| || | ||| ||||||| ||||||||| ||| || | || | ||||||||||    
T  35560 tgttatttttgcattttcaaactgttgtattt-ggatttccaaattctattatttactgaagttgttactaggttaagttacgaccatgccgctctcttt 35658  T
Q  233 aagacgtttcgtgaca 248  Q
    ||||||||||||||||    
T  35659 aagacgtttcgtgaca 35674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 15197 - 15249
Alignment:
Q  133 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgtttt 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15197 tgttgtttttggatttacaaactgttgtattttggttttccaaattctatttt 15249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 3968 - 4020
Alignment:
Q  185 tctaccgaagttgatactaggttgagtcacaaacaggtcgctctctttaagac 237  Q
    ||||||||||||| |||||||||||||||| | ||  ||||||||||||||||    
T  3968 tctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaagac 4020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 2870 - 2826
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgaca 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 10830 - 10786
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcgtgaca 248  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgaca 10786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 34067 - 34028
Alignment:
Q  204 ggttgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 34028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 281 - 314
Alignment:
Q  131 actgttgtttttggattttcaaactgttgtattt 164  Q
    |||||||||||||||||| |||||||||||||||    
T  281 actgttgtttttggatttccaaactgttgtattt 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 165214 - 165181
Alignment:
Q  131 actgttgtttttggattttcaaactgttgtattt 164  Q
    |||||||||||||||||| |||||||||||||||    
T  165214 actgttgtttttggatttccaaactgttgtattt 165181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 3058 - 3094
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcg 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 81477 - 81441
Alignment:
Q  207 tgagtcacaaacaggtcgctctctttaagacgtttcg 243  Q
    |||||||| | ||||||||||||||||||||||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcg 81441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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