View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19263_low_5 (Length: 488)

Name: NF19263_low_5
Description: NF19263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19263_low_5
NF19263_low_5
[»] chr1 (41 HSPs)
chr1 (10-250)||(20046425-20046665)
chr1 (10-249)||(20053463-20053702)
chr1 (28-179)||(21541340-21541492)
chr1 (28-177)||(24076779-24076931)
chr1 (28-179)||(47483558-47483710)
chr1 (76-179)||(24109669-24109771)
chr1 (141-246)||(26722973-26723079)
chr1 (115-179)||(19858627-19858691)
chr1 (125-179)||(3707408-3707463)
chr1 (159-250)||(41110199-41110289)
chr1 (125-181)||(11944539-11944595)
chr1 (115-179)||(19852492-19852556)
chr1 (115-179)||(23196231-23196295)
chr1 (115-179)||(29555088-29555152)
chr1 (134-201)||(20942533-20942600)
chr1 (125-179)||(43631470-43631524)
chr1 (134-179)||(20639723-20639769)
chr1 (250-300)||(27352628-27352678)
chr1 (115-179)||(20032645-20032709)
chr1 (135-179)||(20825012-20825057)
chr1 (135-179)||(20838831-20838876)
chr1 (120-179)||(2341670-2341729)
chr1 (250-298)||(9445108-9445156)
chr1 (134-201)||(16884217-16884284)
chr1 (262-300)||(10435833-10435871)
chr1 (262-300)||(29489394-29489432)
chr1 (250-300)||(40612112-40612162)
chr1 (250-300)||(50226902-50226952)
chr1 (134-179)||(11141686-11141731)
chr1 (133-177)||(21663622-21663667)
chr1 (134-179)||(21697587-21697632)
chr1 (134-179)||(23630405-23630450)
chr1 (134-175)||(23711928-23711969)
chr1 (250-299)||(26501294-26501343)
chr1 (250-299)||(31427980-31428029)
chr1 (134-179)||(31928092-31928137)
chr1 (250-299)||(39669805-39669854)
chr1 (250-299)||(43457842-43457891)
chr1 (134-201)||(11156389-11156456)
chr1 (115-179)||(20848489-20848552)
chr1 (252-300)||(52669793-52669841)
[»] chr6 (38 HSPs)
chr6 (250-470)||(22492050-22492270)
chr6 (10-249)||(19285539-19285778)
chr6 (10-251)||(30270494-30270736)
chr6 (10-249)||(19787418-19787659)
chr6 (10-249)||(12166627-12166869)
chr6 (10-250)||(19882494-19882737)
chr6 (10-250)||(34641523-34641770)
chr6 (10-249)||(19876719-19876961)
chr6 (10-249)||(34648197-34648443)
chr6 (10-249)||(25471240-25471477)
chr6 (28-179)||(21794035-21794187)
chr6 (28-179)||(26419303-26419456)
chr6 (157-248)||(11284541-11284632)
chr6 (115-179)||(8761079-8761144)
chr6 (115-178)||(8768816-8768880)
chr6 (115-176)||(7428797-7428857)
chr6 (125-179)||(22757726-22757779)
chr6 (125-179)||(5295268-5295324)
chr6 (120-179)||(9623379-9623437)
chr6 (115-179)||(14595317-14595381)
chr6 (133-179)||(23236064-23236111)
chr6 (125-179)||(28707406-28707460)
chr6 (125-179)||(1592248-1592305)
chr6 (115-179)||(2707837-2707901)
chr6 (125-179)||(21717574-21717630)
chr6 (125-179)||(21725410-21725466)
chr6 (132-179)||(14616930-14616978)
chr6 (120-179)||(18316689-18316747)
chr6 (125-179)||(24514489-24514543)
chr6 (250-300)||(237421-237471)
chr6 (250-300)||(11785353-11785403)
chr6 (134-179)||(14996625-14996671)
chr6 (250-300)||(28965863-28965913)
chr6 (250-299)||(9954547-9954596)
chr6 (134-179)||(19473006-19473051)
chr6 (134-179)||(22799198-22799243)
chr6 (134-179)||(24412977-24413022)
chr6 (134-179)||(24720044-24720089)
[»] scaffold0088 (1 HSPs)
scaffold0088 (10-249)||(25904-26143)
[»] chr7 (45 HSPs)
chr7 (10-249)||(12592179-12592419)
chr7 (10-247)||(16928187-16928427)
chr7 (10-250)||(13005689-13005938)
chr7 (28-179)||(26295364-26295517)
chr7 (152-250)||(12711592-12711688)
chr7 (152-249)||(13124662-13124757)
chr7 (76-179)||(37244995-37245097)
chr7 (27-179)||(16952869-16953022)
chr7 (120-205)||(18959162-18959244)
chr7 (152-249)||(13741895-13741990)
chr7 (31-157)||(46173624-46173751)
chr7 (115-179)||(10306075-10306139)
chr7 (27-179)||(16946269-16946422)
chr7 (125-179)||(36306767-36306821)
chr7 (21-179)||(3902-4064)
chr7 (115-179)||(125250-125314)
chr7 (115-179)||(10305389-10305453)
chr7 (125-179)||(15338301-15338357)
chr7 (125-179)||(15711636-15711692)
chr7 (115-179)||(16185063-16185127)
chr7 (120-179)||(8775239-8775298)
chr7 (120-179)||(21744431-21744490)
chr7 (120-179)||(46349409-46349468)
chr7 (133-179)||(3290447-3290494)
chr7 (125-179)||(11395356-11395410)
chr7 (134-179)||(3327188-3327234)
chr7 (134-179)||(15086730-15086776)
chr7 (125-179)||(15723861-15723918)
chr7 (250-299)||(19426579-19426628)
chr7 (115-179)||(38827153-38827217)
chr7 (81-179)||(6411287-6411386)
chr7 (252-300)||(33223554-33223602)
chr7 (134-179)||(10308666-10308712)
chr7 (250-300)||(42060654-42060704)
chr7 (262-300)||(44511137-44511175)
chr7 (134-179)||(12694049-12694094)
chr7 (134-179)||(13677734-13677779)
chr7 (134-179)||(15098633-15098678)
chr7 (250-299)||(23761058-23761107)
chr7 (134-179)||(46624308-46624353)
chr7 (134-175)||(46682873-46682914)
chr7 (250-298)||(20406541-20406589)
chr7 (19-94)||(23518284-23518359)
chr7 (262-298)||(29763830-29763866)
chr7 (120-179)||(32770805-32770864)
[»] chr8 (46 HSPs)
chr8 (10-249)||(17052991-17053230)
chr8 (28-179)||(23824456-23824608)
chr8 (152-249)||(25408972-25409068)
chr8 (152-251)||(19903622-19903719)
chr8 (28-179)||(29327483-29327635)
chr8 (19-179)||(27889314-27889475)
chr8 (19-179)||(27947972-27948133)
chr8 (156-249)||(23864834-23864925)
chr8 (23-179)||(22176450-22176607)
chr8 (125-179)||(22064245-22064301)
chr8 (115-179)||(22248483-22248547)
chr8 (76-179)||(31419356-31419458)
chr8 (125-179)||(21281452-21281506)
chr8 (115-179)||(7302263-7302327)
chr8 (115-179)||(21322901-21322965)
chr8 (115-179)||(21327489-21327553)
chr8 (115-179)||(36601092-36601156)
chr8 (115-179)||(44494693-44494757)
chr8 (76-179)||(31412917-31413019)
chr8 (252-300)||(39021468-39021516)
chr8 (115-178)||(44430844-44430907)
chr8 (120-179)||(45136052-45136111)
chr8 (125-179)||(6609372-6609426)
chr8 (249-300)||(22852861-22852912)
chr8 (125-179)||(28852895-28852949)
chr8 (250-300)||(11223882-11223932)
chr8 (134-179)||(21300846-21300892)
chr8 (125-179)||(22989030-22989084)
chr8 (250-300)||(40842012-40842062)
chr8 (134-179)||(19988868-19988915)
chr8 (254-298)||(21273737-21273781)
chr8 (250-298)||(28623134-28623182)
chr8 (254-301)||(26294186-26294233)
chr8 (254-301)||(26307443-26307490)
chr8 (115-176)||(11773703-11773764)
chr8 (115-179)||(34949629-34949695)
chr8 (250-300)||(45101394-45101444)
chr8 (115-179)||(5239471-5239535)
chr8 (250-303)||(11879513-11879566)
chr8 (250-303)||(11896929-11896982)
chr8 (134-179)||(19852944-19852989)
chr8 (134-179)||(19858980-19859025)
chr8 (134-179)||(20005804-20005849)
chr8 (125-171)||(22026242-22026290)
chr8 (250-299)||(37873128-37873177)
chr8 (134-201)||(18609569-18609637)
[»] chr2 (33 HSPs)
chr2 (10-250)||(5707559-5707800)
chr2 (28-177)||(21133917-21134067)
chr2 (28-178)||(36799947-36800099)
chr2 (28-179)||(43692777-43692929)
chr2 (28-179)||(25590735-25590886)
chr2 (28-179)||(27368172-27368324)
chr2 (23-179)||(22809354-22809511)
chr2 (152-249)||(26582066-26582161)
chr2 (115-179)||(6031629-6031693)
chr2 (115-179)||(20964652-20964716)
chr2 (115-179)||(24503659-24503723)
chr2 (115-179)||(25036742-25036806)
chr2 (115-179)||(25040849-25040913)
chr2 (115-179)||(31754915-31754979)
chr2 (134-201)||(23061933-23062000)
chr2 (125-179)||(23029694-23029748)
chr2 (115-185)||(25108123-25108193)
chr2 (252-298)||(39247488-39247534)
chr2 (254-297)||(26321724-26321767)
chr2 (254-297)||(26321892-26321935)
chr2 (250-300)||(5954506-5954556)
chr2 (250-300)||(11229344-11229394)
chr2 (134-179)||(21906700-21906746)
chr2 (14-44)||(23169843-23169873)
chr2 (135-201)||(23263414-23263479)
chr2 (135-201)||(23268630-23268695)
chr2 (14-44)||(23581100-23581130)
chr2 (250-300)||(31296868-31296918)
chr2 (251-300)||(4738596-4738645)
chr2 (251-300)||(33296095-33296144)
chr2 (250-299)||(36909866-36909915)
chr2 (262-298)||(3039864-3039900)
chr2 (254-298)||(3091741-3091785)
[»] scaffold0730 (1 HSPs)
scaffold0730 (10-249)||(4306-4551)
[»] scaffold0148 (1 HSPs)
scaffold0148 (10-249)||(93-338)
[»] chr5 (41 HSPs)
chr5 (10-249)||(23526838-23527079)
chr5 (28-179)||(21676123-21676275)
chr5 (28-181)||(42242356-42242510)
chr5 (125-179)||(22509813-22509869)
chr5 (115-179)||(22759852-22759916)
chr5 (115-179)||(22880006-22880070)
chr5 (125-179)||(24669686-24669742)
chr5 (125-179)||(24739455-24739511)
chr5 (125-179)||(24752224-24752280)
chr5 (115-179)||(33474542-33474606)
chr5 (120-179)||(43120151-43120210)
chr5 (125-179)||(19075436-19075490)
chr5 (133-179)||(21661816-21661863)
chr5 (250-300)||(26660434-26660484)
chr5 (250-300)||(26932026-26932076)
chr5 (137-179)||(30344822-30344864)
chr5 (125-179)||(758910-758966)
chr5 (134-179)||(23433520-23433565)
chr5 (134-179)||(23444885-23444930)
chr5 (250-299)||(36713201-36713250)
chr5 (115-179)||(43244394-43244458)
chr5 (250-302)||(14914368-14914420)
chr5 (120-179)||(43123684-43123743)
chr5 (125-179)||(31253688-31253742)
chr5 (253-299)||(3771032-3771078)
chr5 (115-176)||(6728904-6728965)
chr5 (250-300)||(11768013-11768063)
chr5 (252-298)||(19127124-19127170)
chr5 (250-300)||(23991157-23991207)
chr5 (250-300)||(38500941-38500991)
chr5 (250-299)||(14323991-14324040)
chr5 (30-179)||(22378920-22379072)
chr5 (134-179)||(25013080-25013125)
chr5 (262-299)||(35814452-35814489)
chr5 (250-298)||(12718403-12718451)
chr5 (250-298)||(12779629-12779677)
chr5 (134-178)||(21905970-21906014)
chr5 (19-94)||(28260482-28260556)
chr5 (250-298)||(34381012-34381060)
chr5 (250-298)||(39595272-39595320)
chr5 (250-298)||(42699057-42699105)
[»] scaffold0693 (1 HSPs)
scaffold0693 (10-249)||(1423-1664)
[»] scaffold0125 (1 HSPs)
scaffold0125 (10-249)||(24744-24985)
[»] chr4 (55 HSPs)
chr4 (28-179)||(33096429-33096581)
chr4 (108-249)||(53482649-53482791)
chr4 (28-179)||(37880791-37880942)
chr4 (28-179)||(898994-899147)
chr4 (152-249)||(8056313-8056408)
chr4 (115-186)||(41939995-41940066)
chr4 (23-179)||(14479926-14480083)
chr4 (29-179)||(31664390-31664541)
chr4 (125-179)||(10687514-10687568)
chr4 (125-179)||(10901154-10901208)
chr4 (115-176)||(14062382-14062444)
chr4 (28-157)||(46045470-46045599)
chr4 (115-179)||(55503806-55503870)
chr4 (250-298)||(1031755-1031803)
chr4 (120-179)||(4169941-4170000)
chr4 (152-216)||(11846478-11846542)
chr4 (120-179)||(31132422-31132481)
chr4 (28-179)||(33198347-33198499)
chr4 (133-179)||(2585834-2585881)
chr4 (125-179)||(12931302-12931357)
chr4 (134-179)||(14697664-14697710)
chr4 (134-179)||(38982701-38982747)
chr4 (120-177)||(41529731-41529788)
chr4 (9-58)||(11846638-11846687)
chr4 (134-178)||(14484972-14485016)
chr4 (125-176)||(37839669-37839720)
chr4 (114-201)||(40908037-40908123)
chr4 (249-297)||(45548806-45548854)
chr4 (120-209)||(13451507-13451594)
chr4 (115-177)||(16220700-16220762)
chr4 (125-179)||(42598398-42598452)
chr4 (250-300)||(4896523-4896573)
chr4 (10-40)||(8056168-8056198)
chr4 (252-298)||(15596396-15596442)
chr4 (250-300)||(23094374-23094424)
chr4 (125-179)||(27904692-27904749)
chr4 (114-178)||(30395536-30395604)
chr4 (250-300)||(36444418-36444468)
chr4 (250-300)||(44170642-44170692)
chr4 (249-299)||(47998593-47998643)
chr4 (254-300)||(51318701-51318747)
chr4 (250-300)||(51717305-51717355)
chr4 (76-148)||(11171855-11171928)
chr4 (134-179)||(14992307-14992352)
chr4 (134-179)||(15005654-15005699)
chr4 (134-179)||(16484055-16484100)
chr4 (134-179)||(18260741-18260786)
chr4 (134-179)||(18270704-18270749)
chr4 (134-179)||(30237195-30237240)
chr4 (134-179)||(30873262-30873307)
chr4 (254-298)||(169529-169573)
chr4 (141-188)||(1651733-1651781)
chr4 (254-298)||(30042134-30042178)
chr4 (250-298)||(31240648-31240696)
chr4 (250-298)||(39010160-39010208)
[»] chr3 (48 HSPs)
chr3 (28-179)||(24123899-24124051)
chr3 (19-179)||(29550307-29550467)
chr3 (28-181)||(49162600-49162754)
chr3 (28-179)||(18957210-18957364)
chr3 (141-249)||(41456827-41456936)
chr3 (28-179)||(12418782-12418935)
chr3 (155-249)||(16490791-16490886)
chr3 (123-205)||(18757694-18757773)
chr3 (23-179)||(14292167-14292330)
chr3 (23-179)||(14542235-14542398)
chr3 (254-300)||(55344323-55344369)
chr3 (115-179)||(40538-40602)
chr3 (115-179)||(2249686-2249750)
chr3 (115-179)||(2270910-2270974)
chr3 (125-212)||(18719760-18719845)
chr3 (125-179)||(20187092-20187148)
chr3 (115-179)||(54900761-54900825)
chr3 (134-201)||(15518484-15518551)
chr3 (28-179)||(20377867-20378018)
chr3 (125-179)||(5840713-5840767)
chr3 (132-202)||(13325521-13325591)
chr3 (125-179)||(45221440-45221494)
chr3 (250-300)||(47849670-47849720)
chr3 (134-202)||(13303932-13304000)
chr3 (134-202)||(13314608-13314676)
chr3 (115-179)||(14648919-14648983)
chr3 (250-298)||(20380912-20380960)
chr3 (133-179)||(17495584-17495631)
chr3 (249-300)||(48945845-48945896)
chr3 (137-179)||(11851402-11851444)
chr3 (114-176)||(11957306-11957371)
chr3 (133-179)||(12356672-12356718)
chr3 (137-179)||(16830678-16830720)
chr3 (249-299)||(30796636-30796686)
chr3 (134-179)||(54972260-54972306)
chr3 (134-179)||(54974870-54974916)
chr3 (134-179)||(54977480-54977526)
chr3 (249-298)||(1295332-1295381)
chr3 (134-179)||(8374730-8374775)
chr3 (134-179)||(13037612-13037657)
chr3 (134-179)||(13043977-13044022)
chr3 (134-179)||(15935688-15935733)
chr3 (134-179)||(15937538-15937583)
chr3 (9-46)||(16802992-16803029)
chr3 (250-298)||(462424-462472)
chr3 (250-298)||(9027873-9027921)
chr3 (250-298)||(20893265-20893313)
chr3 (250-298)||(51464295-51464343)
[»] scaffold0104 (2 HSPs)
scaffold0104 (28-176)||(22698-22847)
scaffold0104 (28-176)||(19878-20027)
[»] scaffold0029 (2 HSPs)
scaffold0029 (152-250)||(116218-116314)
scaffold0029 (152-249)||(110150-110245)
[»] scaffold0006 (1 HSPs)
scaffold0006 (151-249)||(48441-48538)
[»] scaffold0060 (1 HSPs)
scaffold0060 (28-178)||(40682-40833)
[»] scaffold0622 (1 HSPs)
scaffold0622 (152-250)||(268-364)
[»] scaffold0058 (5 HSPs)
scaffold0058 (152-250)||(16684-16780)
scaffold0058 (115-179)||(33883-33947)
scaffold0058 (125-179)||(15952-16006)
scaffold0058 (125-178)||(23457-23510)
scaffold0058 (134-178)||(41158-41202)
[»] scaffold0117 (1 HSPs)
scaffold0117 (152-249)||(10325-10420)
[»] scaffold0811 (1 HSPs)
scaffold0811 (152-249)||(646-741)
[»] scaffold0074 (1 HSPs)
scaffold0074 (81-177)||(16409-16506)
[»] scaffold0026 (2 HSPs)
scaffold0026 (115-179)||(125119-125184)
scaffold0026 (134-179)||(28609-28654)
[»] scaffold0188 (1 HSPs)
scaffold0188 (76-179)||(32237-32340)
[»] scaffold0634 (2 HSPs)
scaffold0634 (120-250)||(1958-2087)
scaffold0634 (7-58)||(2151-2202)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-177)||(102271-102431)
[»] scaffold0461 (2 HSPs)
scaffold0461 (134-201)||(1760-1827)
scaffold0461 (134-201)||(8696-8763)
[»] scaffold0023 (1 HSPs)
scaffold0023 (125-178)||(21107-21162)
[»] scaffold0031 (1 HSPs)
scaffold0031 (31-179)||(74754-74903)
[»] scaffold1340 (1 HSPs)
scaffold1340 (115-179)||(1859-1923)
[»] scaffold0512 (1 HSPs)
scaffold0512 (115-179)||(12036-12100)
[»] scaffold0326 (4 HSPs)
scaffold0326 (125-179)||(1087-1143)
scaffold0326 (126-189)||(16908-16973)
scaffold0326 (133-179)||(7985-8031)
scaffold0326 (133-179)||(15887-15933)
[»] scaffold0301 (1 HSPs)
scaffold0301 (123-179)||(14068-14125)
[»] scaffold0072 (1 HSPs)
scaffold0072 (115-179)||(55381-55445)
[»] scaffold0011 (4 HSPs)
scaffold0011 (115-179)||(251345-251409)
scaffold0011 (134-201)||(198116-198183)
scaffold0011 (115-179)||(257964-258028)
scaffold0011 (250-300)||(219687-219737)
[»] scaffold0003 (2 HSPs)
scaffold0003 (125-179)||(194567-194623)
scaffold0003 (115-178)||(136843-136906)
[»] scaffold0610 (1 HSPs)
scaffold0610 (134-201)||(4955-5022)
[»] scaffold0298 (1 HSPs)
scaffold0298 (134-201)||(1329-1396)
[»] scaffold0141 (1 HSPs)
scaffold0141 (120-179)||(32105-32164)
[»] scaffold0049 (1 HSPs)
scaffold0049 (120-179)||(82648-82707)
[»] scaffold0001 (3 HSPs)
scaffold0001 (160-216)||(488546-488602)
scaffold0001 (123-179)||(95310-95366)
scaffold0001 (134-179)||(452421-452466)
[»] scaffold1542 (1 HSPs)
scaffold1542 (134-181)||(1487-1534)
[»] scaffold0751 (1 HSPs)
scaffold0751 (134-181)||(6505-6552)
[»] scaffold0679 (1 HSPs)
scaffold0679 (125-179)||(3771-3825)
[»] scaffold0323 (1 HSPs)
scaffold0323 (23-173)||(6728-6882)
[»] scaffold1615 (1 HSPs)
scaffold1615 (134-179)||(1083-1129)
[»] scaffold0190 (1 HSPs)
scaffold0190 (28-179)||(27948-28101)
[»] scaffold0098 (1 HSPs)
scaffold0098 (115-176)||(33602-33663)
[»] scaffold0077 (2 HSPs)
scaffold0077 (134-179)||(18841-18887)
scaffold0077 (134-179)||(24468-24514)
[»] scaffold0516 (1 HSPs)
scaffold0516 (115-179)||(8271-8335)
[»] scaffold0154 (1 HSPs)
scaffold0154 (250-299)||(4314-4363)
[»] scaffold0120 (1 HSPs)
scaffold0120 (133-177)||(5831-5876)
[»] scaffold0342 (1 HSPs)
scaffold0342 (115-179)||(17526-17593)
[»] scaffold0139 (1 HSPs)
scaffold0139 (134-201)||(16726-16793)
[»] scaffold0090 (1 HSPs)
scaffold0090 (152-216)||(17398-17462)
[»] scaffold0511 (1 HSPs)
scaffold0511 (120-179)||(673-731)
[»] scaffold1061 (1 HSPs)
scaffold1061 (135-201)||(717-782)
[»] scaffold0235 (2 HSPs)
scaffold0235 (134-179)||(7391-7437)
scaffold0235 (134-179)||(17605-17651)
[»] scaffold0204 (1 HSPs)
scaffold0204 (250-300)||(27337-27387)
[»] scaffold0076 (1 HSPs)
scaffold0076 (125-179)||(52361-52413)
[»] scaffold0015 (1 HSPs)
scaffold0015 (115-179)||(172460-172520)
[»] scaffold0661 (1 HSPs)
scaffold0661 (134-179)||(4775-4820)
[»] scaffold0574 (1 HSPs)
scaffold0574 (115-175)||(6550-6610)
[»] scaffold0395 (1 HSPs)
scaffold0395 (134-179)||(4778-4823)
[»] scaffold0244 (1 HSPs)
scaffold0244 (134-179)||(20090-20135)
[»] scaffold0220 (1 HSPs)
scaffold0220 (125-175)||(9824-9876)
[»] scaffold0211 (1 HSPs)
scaffold0211 (134-179)||(8782-8827)
[»] scaffold0167 (1 HSPs)
scaffold0167 (133-181)||(6386-6435)
[»] scaffold0109 (1 HSPs)
scaffold0109 (115-179)||(1333-1397)
[»] scaffold0081 (1 HSPs)
scaffold0081 (134-179)||(56610-56655)
[»] scaffold0078 (1 HSPs)
scaffold0078 (134-179)||(18108-18153)
[»] scaffold0054 (1 HSPs)
scaffold0054 (134-179)||(62467-62512)
[»] scaffold0053 (1 HSPs)
scaffold0053 (134-179)||(61698-61743)
[»] scaffold0024 (1 HSPs)
scaffold0024 (249-302)||(60465-60518)
[»] scaffold0007 (1 HSPs)
scaffold0007 (134-179)||(208243-208288)
[»] scaffold0990 (1 HSPs)
scaffold0990 (134-178)||(3329-3373)
[»] scaffold0592 (1 HSPs)
scaffold0592 (252-300)||(8332-8380)
[»] scaffold0355 (1 HSPs)
scaffold0355 (134-175)||(2198-2241)
[»] scaffold0249 (1 HSPs)
scaffold0249 (134-201)||(8400-8467)
[»] scaffold0113 (2 HSPs)
scaffold0113 (114-154)||(14577-14617)
scaffold0113 (114-154)||(18587-18627)
[»] scaffold0004 (2 HSPs)
scaffold0004 (135-179)||(115187-115231)
scaffold0004 (120-179)||(320532-320591)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 20046425 - 20046665
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  20046425 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgcttcataataaacgacgatt 20046524  T
Q  110 tcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctta 209  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20046525 tcgtcggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctta 20046624  T
Q  210 ttttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20046625 ttttatttaaataaagtatatttggaaatggggtgttacaa 20046665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 20053463 - 20053702
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  20053463 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgcttcataataaacgacgatt 20053562  T
Q  110 tcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctta 209  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20053563 tcgtcggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctta 20053662  T
Q  210 ttttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  20053663 ttttatttaaataaagtatatttgggaatagggtgttaca 20053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 21541492 - 21541340
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  21541492 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 21541393  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  21541392 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgccc 21541340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 177
Target Start/End: Complemental strand, 24076931 - 24076779
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||||||||||| |||  |||||| || | ||||  ||||| |||||||    
T  24076931 tttatgccaagatattattttggaggtttaaacagttgttgatgtttcgatgataatattccgttgctaattaaatgatgatttcactggatgtttaata 24076832  T
Q  127 aatagat-ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgc 177  Q
    ||||||| ||||||||||||||| ||||| |||||||  ||||||||||||||    
T  24076831 aatagattttttatattctattttagaaattttgaaatagtagtgtgacatgc 24076779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 47483710 - 47483558
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| ||||   |||||||||||||||||  |||||| |  | ||||  ||||| |||||||    
T  47483710 tttatgccaagatattattttggaggtttaaacacttgttgatgtttgc-tgataatattccgctgctgattaaatgttgatttctatggatgtttaata 47483612  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  47483611 aatagatttttatattctatttaagaaattttgatatagtagtgtgacatgccc 47483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 24109669 - 24109771
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacat 175  Q
    |||| |||||||||||||  | |||| || | ||||| |||||  ||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||    
T  24109669 atgagaatattccgctgctaaataaatgatgatttcgatggatgcttaataaatag-tttttatattctatttaggaattttgaaaatgtagtgtgacat 24109767  T
Q  176 gccc 179  Q
    ||||    
T  24109768 gccc 24109771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 26722973 - 26723079
Alignment:
Q  141 ttctatttcagaaatttgaaaatgtagtgtgacatgccca-tgtggattta-ttactctgatgtgtgcttattttatttaaataaagtatatttggaaat 238  Q
    |||||||| |||  |||||||||| | ||||||||||||| | || ||||| ||||||||||||||| |||||||| ||||||||| ||||||||| |||    
T  26722973 ttctatttaagagttttgaaaatgaaatgtgacatgcccaatttgaatttaattactctgatgtgtgtttatttta-ttaaataaattatatttgggaat 26723071  T
Q  239 ggggtgtt 246  Q
    ||||||||    
T  26723072 ggggtgtt 26723079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 19858691 - 19858627
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19858691 ggatgtttattaaatag-tttttatattctatttcagaaattttgaaaatgtagtgtgacatgccc 19858627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 3707408 - 3707463
Alignment:
Q  125 taaatagatttt-tatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  3707408 taaatagattttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 3707463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 41110289 - 41110199
Alignment:
Q  159 aaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    |||||| |||| ||||||||||| || |  ||||||||||||||||| |||||||| ||||||||  ||||||| | |||||||||||||||    
T  41110289 aaaatgaagtgcgacatgcccatttgaaaatattactctgatgtgtgtttatttta-ttaaataatttatatttaggaatggggtgttacaa 41110199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 11944595 - 11944539
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccat 181  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  11944595 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccat 11944539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 19852556 - 19852492
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19852556 ggatgtttattaaatag-tttttatattctattttagaaattttgaaaatgtagtgtgacatgccc 19852492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 23196231 - 23196295
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  23196231 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 23196295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 29555088 - 29555152
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  29555088 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 29555152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 20942533 - 20942600
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  20942533 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 20942600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 43631470 - 43631524
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  43631470 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 43631524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 20639769 - 20639723
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  20639769 ttttatattctatttaagaaaatttgaaaatgtagtgtgacatgccc 20639723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 27352678 - 27352628
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||| | |||||||||||||||||||||||  ||||||||||||||    
T  27352678 aaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctctt 27352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 20032645 - 20032709
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||    
T  20032645 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatatagtgtgacatgccc 20032709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 20825012 - 20825057
Alignment:
Q  135 tttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||    
T  20825012 tttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 20825057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 20838831 - 20838876
Alignment:
Q  135 tttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||    
T  20838831 tttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 20838876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 2341670 - 2341729
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||    
T  2341670 tttattaaatagatttt-atattctatttaagaatttttgaaaatgtagtgtgacatgccc 2341729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 9445156 - 9445108
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||||    
T  9445156 aaagttgtcaaaaagttgttacaaaatggttgtacgaatatcatttctc 9445108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 16884217 - 16884284
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||| | |||  ||||||||||||||    
T  16884217 ttttatattctatttaagaaattttgaaaatatagtgtgacatgcccgtttgg-gttattactctgatg 16884284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 10435833 - 10435871
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  10435833 aagttgtcacaaaatggttgtacgaatatcatttctctt 10435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 29489394 - 29489432
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  29489394 aagttatcacaaaatggttgtacaaatatcatttctctt 29489432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 40612162 - 40612112
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||  ||||||| |||||||||||||||||  ||||||||||||||    
T  40612162 aaagttgtggagaagttgtcacaaaatggttgtacaaatatcatttctctt 40612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 50226902 - 50226952
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  50226902 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 50226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 11141686 - 11141731
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  11141686 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 11141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 21663667 - 21663622
Alignment:
Q  133 tttttatattctatttcagaaattt-gaaaatgtagtgtgacatgc 177  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  21663667 tttttacattctatttaagaaattttgaaaatgtagtgtgacatgc 21663622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 21697632 - 21697587
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  21697632 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 21697587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 23630450 - 23630405
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  23630450 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 23630405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 23711969 - 23711928
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacat 175  Q
    ||||||||||||||| |||||||| |||| ||||||||||||    
T  23711969 ttttatattctatttaagaaattttaaaaagtagtgtgacat 23711928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 26501343 - 26501294
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||| | ||||||| |||||||||||||||  |||||||||||||    
T  26501343 aaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctct 26501294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 31427980 - 31428029
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    |||||||||||||| || ||||||| |||||||||  |||||||||||||    
T  31427980 aaagttgtcaagaaattgtcacaaagtggttgtacaaatatcatttctct 31428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 31928092 - 31928137
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  31928092 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 31928137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 39669854 - 39669805
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| || || |||||||||||||||||  |||||||||||||    
T  39669854 aaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctct 39669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 43457842 - 43457891
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||| | |||||||| ||||||||||||||  |||||||||||||    
T  43457842 aaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctct 43457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 11156456 - 11156389
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||| ||||||||| | |||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  11156456 ttttacattctatttaataaattttgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 11156389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 20848552 - 20848489
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||| |||||||  ||||||||||||||| |||||  |||||||| ||||||||||||||||    
T  20848552 ggatatttattaaatag--ttttatattctatttaagaaaattttgaaaa-gtagtgtgacatgccc 20848489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 52669793 - 52669841
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||| ||||||| |||||||||||||||||  |||||| |||||||    
T  52669793 agttgtccagaagttgtcacaaaatggttgtacaaatatcacttctctt 52669841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 250 - 470
Target Start/End: Original strand, 22492050 - 22492270
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttgatgatttggtcttactttctaatatttattagaatctttatttatctc 349  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22492050 aaagttgtcaagaagttatcacaaaatggttgtacatatatcatttctcttgatgatttggtcttactttctaatatttattagaatctttatttatctc 22492149  T
Q  350 tatttatgtctttctataacattagtctcactctcactattcccctctcaaggtgtaataatcactcaaagaaatctgaagcaacatatattcgctttga 449  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22492150 tatttatgtctttctataacattaatctcactctcactattcccctctcaaggtgtaataatcactcaaagaaatctgaagcaacatatattcgctttga 22492249  T
Q  450 ctctaaacacagtcccaatta 470  Q
    |||||||||||||||||||||    
T  22492250 ctctaaacacagtcccaatta 22492270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 19285778 - 19285539
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggt 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||||||||||||| || | |    
T  19285778 attattctggttgaggctttttatgccaagatattatttggaggtttaaacagttgttgacgtttcgaatataatattccgctgcatattaaatgatgat 19285679  T
Q  109 ttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctt 208  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||    
T  19285678 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgcagtgtgacatgcccatttggatttattactctgatgtgtgttt 19285579  T
Q  209 attttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||| ||||||||| ||||||||| ||||||||||||||    
T  19285578 atttta-ttaaataaattatatttgggaatggggtgttaca 19285539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 30270736 - 30270494
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaacgacggt 108  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  30270736 attattttggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 30270638  T
Q  109 tt-cgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||     
T  30270637 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgtatgt 30270538  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttacaaa 251  Q
    ||| |||||||||||||||||||| ||| ||||||||||||||||    
T  30270537 tta-tttatttaaataaagtatatatgggaatggggtgttacaaa 30270494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 19787418 - 19787659
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  ||||||||||| ||||||||||||| || |     
T  19787418 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattctgctgcatattaaatgatga 19787517  T
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgct 207  Q
    |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |    
T  19787518 tttcattggatgtttaataaatagatttttatattctattttagaaatttgaaaatgtagtgtgacatgcccatttggatttattactctgacgtgtgtt 19787617  T
Q  208 tattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  19787618 tattttatttaaataaattatatttgggaatggggtgttaca 19787659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 12166869 - 12166627
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||||||||  ||||||||||||||||||||||||| || |     
T  12166869 attattctggttgaggctttttatgctgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 12166770  T
Q  108 tttcgttggatatttaataaatagattttt-atattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgc 206  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  12166769 tttcattggatgtttaataaatagattttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttattactctgatgtgtgt 12166670  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||    
T  12166669 ttatttcatttaaataaattatatttgggaatggggtgttaca 12166627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 19882737 - 19882494
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  ||||||||||||||||||||||||| || |     
T  19882737 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 19882638  T
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||     
T  19882637 tttcattggatgtttaataaatagatttttatattttatttcagaaatttgaaagtgtggtgtgacatgcccatttggattttattactctgatgtgtgt 19882538  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  19882537 ttattttatttaaataaattatatttgggaatggggtgttacaa 19882494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 34641523 - 34641770
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacg-g 107  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      
T  34641523 attattctggttgaggctttttatgccaagatattgtttggagttttaaatagttgttgacgtttctatgataatattccgctgcatattaaacgacgat 34641622  T
Q  108 tttcgttggatatttaataaatagatttt----tatattctatttcagaaatttg-aaaatgtagtgtgacatgcccatgtgga-tttattactctgatg 201  Q
    |||| |||||||||| |||||||||||||    |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||    
T  34641623 tttctttggatattttataaatagatttttatatatattctatttcagaaatttgaaaaatgaagtgtgacatgcccatgtggattttatgactctgatg 34641722  T
Q  202 tgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    | || ||| |||||||||||||||||||||||| |||||||||||||||    
T  34641723 tatgttta-tttatttaaataaagtatatttgggaatggggtgttacaa 34641770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 19876961 - 19876719
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    |||||||| |||||||||||| ||| | ||||||||||| |||| |||||| |||||||||||||||  ||||||||||||||||||||||||| || |     
T  19876961 attattctcgttgaggctttttatgtcgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 19876862  T
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||     
T  19876861 tttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaagtgtagtgtgacatgcccatttggattttattactctgatgtgtgt 19876762  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  19876761 ttattttatttaaataaattatatttgggaatggggtgttaca 19876719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 34648197 - 34648443
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacg-g 107  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||      
T  34648197 attattctggttgaggctttttatgccaagatattgtttggagttttaaatagttgttgacgtttctatgataatattccgctgcatattaaacgacgat 34648296  T
Q  108 tttcgttggatatttaataaatagatttt----tatattctatttcagaaatttg-aaaatgtagtgtgacatgcccatgtgga-tttattactctgatg 201  Q
    |||| |||||||||| |||||||||||||    |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||||    
T  34648297 tttctttggatattttataaatagatttttatatatattctatttcagaaatttgaaaaatgaagtgtgacatgcccatgtggattttatgactctgatg 34648396  T
Q  202 tgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    | || ||| ||||||||||||||||||||| || ||||||||||||||    
T  34648397 tatgttta-tttatttaaataaagtatattcgggaatggggtgttaca 34648443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 25471240 - 25471477
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggt 108  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || | |    
T  25471240 attattctagttgaggctttttatgccaagatattatttggagatttaaacagttgttgacgtttcaatgataatattccgctgcatattaaatgatgat 25471339  T
Q  109 ttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctt 208  Q
    ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||||| | | ||||||||||||||||||  ||    
T  25471340 ttcattggatgtttaataaataga-ttttatattctatttcagaaatttgaaaatgaagtgtgactcgcccat-tagttttattactctgatgtgtattt 25471437  T
Q  209 attttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||| ||||||||| ||||||||| ||||||||||||||    
T  25471438 atttta-ttaaataaattatatttgggaatggggtgttaca 25471477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 21794035 - 21794187
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||||||    
T  21794035 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttaata 21794134  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21794135 aatagatttttatattctattttagaaatttgaaaatgtagtgtgacatgccc 21794187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 26419303 - 26419456
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    ||||||||||||| |||||| |||| |||||| ||||||||  ||||  |||||||||||||||||   | |||| || | ||||  ||||| |||||||    
T  26419303 tttatgccaagattttattttggaggtttaaaaagttgttgttgttttgatgataatattccgctgttaaataaatgatgatttcaatggatgtttaata 26419402  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||    
T  26419403 aatagatttttatattctattttagaaattttaaaaaagtagtgtgacatgccc 26419456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 11284541 - 11284632
Alignment:
Q  157 tgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaa-gtatatttggaaatggggtgttac 248  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||  ||||||||| |||||||||||||    
T  11284541 tgaaaatgaagtgtgacatgcccatttggaattattactctgatgtgtgtttatttta-ttaaataaatttatatttgggaatggggtgttac 11284632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 8761079 - 8761144
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  8761079 ggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 8761144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 8768816 - 8768880
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcc 178  Q
    |||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  8768816 ggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcc 8768880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 7428857 - 7428797
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatg 176  Q
    |||| |||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7428857 ggatttttattaaatagatttt-atattctattttagaaatttgaaaatgtagtgtgacatg 7428797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 22757779 - 22757726
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||    
T  22757779 taaatagatttt-atattctatttaagaaatttgaaattgtagtgtgacatgccc 22757726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 5295268 - 5295324
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  5295268 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 5295324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 9623379 - 9623437
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9623379 tttaataaatag--ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 9623437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 14595317 - 14595381
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  14595317 ggatttttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 14595381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 23236064 - 23236111
Alignment:
Q  133 tttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  23236064 tttttatattctatttaagaaaatttgaaaatgtagtgtgacatgccc 23236111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 28707460 - 28707406
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  28707460 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 28707406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 1592305 - 1592248
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaa-tgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  1592305 taaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatgccc 1592248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 2707901 - 2707837
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaatttgaaaa-tgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  2707901 ggatgtttattaaatagatttt-atattctatttaagaaattttaaaaatgtagtgtgacatgccc 2707837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 21717574 - 21717630
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||    
T  21717574 taaatagatttttatatgttctatttaagaaaattgaaattgtagtgtgacatgccc 21717630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 21725410 - 21725466
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||    
T  21725410 taaatagatttttatatgttctatttaagaaaattgaaattgtagtgtgacatgccc 21725466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 14616930 - 14616978
Alignment:
Q  132 atttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  14616930 atttttatattctatttaagaaattttgaatatgtagtgtgacatgccc 14616978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 18316689 - 18316747
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||| ||||||| |||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  18316689 tttattaaatag-tttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 18316747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 24514489 - 24514543
Alignment:
Q  125 taaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||    
T  24514489 taaatagatttt-atattctatttatgaaattttgaaaatgtagtgtgacatgccc 24514543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 237421 - 237471
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| |||| ||||||| ||||||||||  ||||||||||||||    
T  237421 aaagttgtcaaaaagtaatcacaagatggttgtacaaatatcatttctctt 237471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 11785403 - 11785353
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| || || |||||||||||||||||  ||||||||||||||    
T  11785403 aaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 11785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 14996625 - 14996671
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||    
T  14996625 ttttatattctatttaaggaattttgaaaatgtagtgtgacatgccc 14996671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 28965863 - 28965913
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||| | |||||||||||||||  ||||||||||||||    
T  28965863 aaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 9954596 - 9954547
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| ||||| ||||||| |||||||||  |||||||||||||    
T  9954596 aaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctct 9954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 19473006 - 19473051
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  19473006 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 19473051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 22799198 - 22799243
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  22799198 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 22799243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 24412977 - 24413022
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  24412977 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 24413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 24720089 - 24720044
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||| ||||||| |||||||| |||| ||||||||||||||||    
T  24720089 ttttataatctatttaagaaattttaaaaagtagtgtgacatgccc 24720044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 177; Significance: 3e-95; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 25904 - 26143
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggt 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| || | |    
T  25904 attattctggttgaggctttttatgccaagatattatttggaggtttaaatagttgttgacgtttcgatgataatattccgctgcatattaaatgatgat 26003  T
Q  109 ttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctt 208  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||    
T  26004 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatttggatttattactctgatgtgtgttt 26103  T
Q  209 attttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||| ||||||||| ||||||||| ||||||||||||||    
T  26104 atttta-ttaaataaattatatttgggaatggggtgttaca 26143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 5e-91; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 12592179 - 12592419
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacg-gt 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  |    
T  12592179 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgttccaatgataatactccgctgcatattaaacgacgatt 12592278  T
Q  109 ttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgct 207  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| || |    
T  12592279 ttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgtatgtt 12592378  T
Q  208 tattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    || ||||||| |||||||||||||||| ||||||||||||||    
T  12592379 ta-tttattttaataaagtatatttgggaatggggtgttaca 12592419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 16928187 - 16928427
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||||  ||||||||||||||||||||||||| || |     
T  16928187 attattctggttgaggctttttatgccgagatattattttggaggtttaaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatga 16928286  T
Q  108 tttcgttggatatttaataaatagatttt-tatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgc 206  Q
    ||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16928287 tttcaatggatgtttaataaatagattttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttattactctgatgtgtgt 16928386  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgtta 247  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  16928387 ttattttatttaaataaattatatttggaaatggggtgtta 16928427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 13005938 - 13005689
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggt 108  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| || | |    
T  13005938 attattctggttgaggctttttatgccaagatattatttggagatttaaacagttgttgacgtttcgatgataatattccgctgcatattaaatgatgat 13005839  T
Q  109 ttcgttggatatttaataaatagatttt----------tatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctg 198  Q
    ||| ||| || |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  13005838 ttcattgaatgtttaataaatagatttttccttttttatatattctatttcagaaatttgaaaatgtagtgtgacatgcccat-tcgatttattactctg 13005740  T
Q  199 atgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||||||| |||||||| ||||||||| ||||||||| |||||||||||||||    
T  13005739 atgtgtgtttatttta-ttaaataaattatatttgggaatggggtgttacaa 13005689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 26295364 - 26295517
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||| ||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||  |||||| |||||||    
T  26295364 tttatgccaatatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgattttattggatgtttaata 26295463  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||| |||||||  ||||||||||||||||    
T  26295464 aatagatttttatattctattttagaaattttgaaatagtagtgtgacatgccc 26295517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 12711592 - 12711688
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||||||||||| | |||||||||||||||| | || |||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||||||||||    
T  12711592 aaatttgaaaacgaagtgtgacatgcccat-tagaattattactctgatgtgcgtttattttatt-aaataaattatatttgggaatggggtgttacaa 12711688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 13124662 - 13124757
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||| | |||||||||||||||| | || |||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||||||||||    
T  13124662 aaatttgaaaacgaagtgtgacatgcccat-tagaattattactctgatgtgcgtttattttatt-aaataaattatatttgggaatggggtgttaca 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 37244995 - 37245097
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgaca 174  Q
    |||| |||||||||||||  |||||| || | ||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  37244995 atgagaatattccgctgctaattaaatgatgatttcgatggatgtttaataaatag-tttttatattctattt-agaaattttgaaaatgtagtgtgaca 37245092  T
Q  175 tgccc 179  Q
    |||||    
T  37245093 tgccc 37245097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 16952869 - 16953022
Alignment:
Q  27 ttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaat 125  Q
    |||||||||||||| ||||| ||||| || ||| |||| |||  ||||  |||| ||||||| |||||    |||| || | ||||| |||||||||| |    
T  16952869 ttttatgccaagattttattatggagattaaaacagttattgttgttttgatgagaatattctgctgctacataaatgatgatttcgatggatatttatt 16952968  T
Q  126 aaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  16952969 aaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 16953022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 18959162 - 18959244
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtg 205  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| | ||| ||  |||||||||||||||    
T  18959162 tttaataaatag-tttttatattctatttaagaattttgaaaatgtagtgtgacatgcccgtttgggtt--ttactctgatgtgtg 18959244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 13741990 - 13741895
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||| | |||||||||||||||| | || |||||||||||||||| | |||||||||| | ||||| ||||||||| ||||||||||||||    
T  13741990 aaatttgaaaacgaagtgtgacatgcccat-tagaattattactctgatgtgcgtttattttatt-agataaattatatttgggaatggggtgttaca 13741895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 46173751 - 46173624
Alignment:
Q  31 atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaataaat 129  Q
    ||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||| |  | ||||  ||||| |||| |||||    
T  46173751 atgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttactaaat 46173652  T
Q  130 agatttttatattctatttcagaaattt 157  Q
    ||||||||||||||||||| ||||||||    
T  46173651 agatttttatattctatttaagaaattt 46173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 10306075 - 10306139
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  10306075 ggatatttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 10306139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 16946269 - 16946422
Alignment:
Q  27 ttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaat 125  Q
    |||||||||||||| ||||| ||||| || ||| |||| |||  ||||   ||| |||||||| ||||  | |||| || | ||||| ||||| |||| |    
T  16946269 ttttatgccaagattttattatggagattaaaacagttattgttgttttgttgagaatattccactgctaaataaatgatgatttcgatggatgtttact 16946368  T
Q  126 aaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||    
T  16946369 aaatagatttt-atattctatttaagaaattttgaaaatgtagtgtaacatgccc 16946422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 36306767 - 36306821
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||||||||||    
T  36306767 taaatagatttttatattctatttaagaaatttaaagttgtagtgtgacatgccc 36306821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 3902 - 4064
Alignment:
Q  21 tgaggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtt---tcaatgataatattccgctgcatattaaacgacggtttcgttgg 116  Q
    |||||||||||||||| |||| | || |||||  ||||||||||||||  |||   |  |||| |||||||||||||  | |||| || | ||||| |||    
T  3902 tgaggcttttatgccaggataattttatggagaattaaatagttgttgttgttgttttgatgagaatattccgctgctaaataaatgatgatttcgatgg 4001  T
Q  117 atatttaataaatagatttttatattctatttcagaaatttg-aaaatgtagtgtgacatgccc 179  Q
    || || ||||||||| |||||||||||||||| | ||||||  |||||||||||||||||||||    
T  4002 atgttcaataaatag-tttttatattctattttataaatttttaaaatgtagtgtgacatgccc 4064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 125250 - 125314
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  125250 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 125314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 10305453 - 10305389
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  10305453 ggatttttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 10305389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 15338357 - 15338301
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||    
T  15338357 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 15338301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 15711636 - 15711692
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||    
T  15711636 taaatagatttttatatgttctatttaagaaatttgaaattgtagtgtgacatgccc 15711692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 16185127 - 16185063
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  16185127 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 16185063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 8775298 - 8775239
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  8775298 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 8775239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 21744431 - 21744490
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  21744431 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 21744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 46349409 - 46349468
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  46349409 tttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 46349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 3290447 - 3290494
Alignment:
Q  133 tttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3290447 tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 3290494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 11395356 - 11395410
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  11395356 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 11395410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 3327234 - 3327188
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3327234 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 3327188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15086730 - 15086776
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15086730 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 15086776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 15723861 - 15723918
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaa-tgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  15723861 taaatagatttttatatgttctatttaagaaatttgaaaattgtagtgtgacatgccc 15723918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 19426628 - 19426579
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  19426628 aaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctct 19426579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 38827217 - 38827153
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  38827217 ggatttttattaaatagatttt-atattctatttaacaaattttgaaaatgtagtgtgacatgccc 38827153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 6411386 - 6411287
Alignment:
Q  81 aatattccgctgcatattaaacgacggtttcgttggatatttaat-aaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcc 178  Q
    ||||||||||||||  ||||| || | ||| |  |||| |||||| ||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||    
T  6411386 aatattccgctgcaagttaaatgatgattttgaaggatgtttaattaaatagatttt-atattctatttaagaaattttgaaattgtagtgtgacatgcc 6411288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 33223554 - 33223602
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||| |||||||||||||||||  ||||||||| ||||    
T  33223554 agttgtcaagaagttgtcacaaaatggttgtacaaatatcatttttctt 33223602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 10308666 - 10308712
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  10308666 ttttatattctatttaacaaattttgaaaatgtagtgtgacatgccc 10308712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 42060704 - 42060654
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| |||||||  ||||||||||||||  ||||||||||||||    
T  42060704 aaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctctt 42060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 44511175 - 44511137
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  44511175 aagttgtcacaaaatggttgtacgaatatcatttctctt 44511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12694094 - 12694049
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  12694094 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 12694049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 13677779 - 13677734
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||| ||| |||||||||||    
T  13677779 ttttatattctatttaagaaattttaaaatttagcgtgacatgccc 13677734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15098633 - 15098678
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  15098633 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 15098678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 23761107 - 23761058
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| ||||||||| ||||| | ||||| ||||||||||||||    
T  23761107 aaagttgtcaaaaagttatcaaaaaatcgatgtacatatatcatttctct 23761058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 46624353 - 46624308
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  46624353 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 46624308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 46682873 - 46682914
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacat 175  Q
    ||||||||||||||| |||||||| |||| ||||||||||||    
T  46682873 ttttatattctatttaagaaattttaaaaagtagtgtgacat 46682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 20406589 - 20406541
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| |||||| ||||||||||  ||||||||||||    
T  20406589 aaagttgtcaaaaagttgtcacaagatggttgtacaaatatcatttctc 20406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 23518359 - 23518284
Alignment:
Q  19 gttgaggcttttatgccaagatatta-tttggagttttaaatagttgttgacgtttcaatgataatattccgctgca 94  Q
    ||||||||||||||||||||||| || ||||||| ||||||   ||||||| ||||  |||||||||||| ||||||    
T  23518359 gttgaggcttttatgccaagataatattttggaggtttaaactattgttgatgttt-gatgataatattctgctgca 23518284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 29763866 - 29763830
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||||||||||||||||||||||  ||||||||||||    
T  29763866 aagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 32770864 - 32770805
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    |||| ||||||| |||||||||||||||| ||||   ||||||||||||||||||||||||    
T  32770864 tttattaaatag-tttttatattctatttaagaatgcttgaaaatgtagtgtgacatgccc 32770805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 17053230 - 17052991
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggt 108  Q
    |||||||||||||||||||||||||| ||||||||||| |||| || ||| |||||||||||||||  ||||||||||||||||||||||||| || | |    
T  17053230 attattctggttgaggcttttatgccgagatattattttggaggtt-aaacagttgttgacgtttcgttgataatattccgctgcatattaaatgatgat 17053132  T
Q  109 ttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctt 208  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  17053131 ttcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatttggatttattactctgatgtgtgttt 17053032  T
Q  209 attttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  17053031 attttatttaaataaattatatttgggaatggggtgttaca 17052991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 23824608 - 23824456
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||| ||||||||||||  |||||| || | | || |||||| |||| ||    
T  23824608 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgattatattccgctgctaattaaatgatgatctcattggatgtttatta 23824509  T
Q  127 aatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| |||||  |||||||||||||||||||||||||    
T  23824508 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgccc 23824456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 25409068 - 25408972
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||| |||||||||||||||| || | ||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||||||||||||    
T  25409068 aaatttgaaaatgaagtgtgacatgcccatttgaagttattactctgatgtgtgtatatttta-ttaaataaattatatttgggaatggggtgttaca 25408972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 19903622 - 19903719
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaaa 251  Q
    ||||||||||| | |||||||||||||||| |||| |||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||||||||||||    
T  19903622 aaatttgaaaacgaagtgtgacatgcccat-tggaattattactctgatgtgcgtttattttatt-aaataaattatatttgggaatggggtgttacaaa 19903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 29327635 - 29327483
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||| |  | ||||  ||||| |||| ||    
T  29327635 tttatgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttagta 29327536  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||||||  |||||||||||  |||||||    
T  29327535 aatagatttttatattctatttaagaaattttgaaatgtagtgtagcatgccc 29327483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 27889475 - 27889314
Alignment:
Q  19 gttgaggcttttatgccaagatattatttggagtttt-aaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttgga 117  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||| |   ||||||||| | |||   ||||| || | |||| |||||    
T  27889475 gttgaggcttt-atgccaagatattgtttggagttttaaaatagttgttgatgtttgatgaataatattctggtgctgtttaaatgatgatttcattgga 27889377  T
Q  118 tatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    | ||||||||||  || |||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  27889376 tgtttaataaatgaatatttatattctatttaagaaattttgatatagtagtgtgacatgccc 27889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 27948133 - 27947972
Alignment:
Q  19 gttgaggcttttatgccaagatattatttggagtttt-aaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttgga 117  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||| |   ||||||||| | |||   ||||| || | |||| |||||    
T  27948133 gttgaggcttt-atgccaagatattgtttggagttttaaaatagttgttgatgtttgatgaataatattctggtgctgtttaaatgatgatttcattgga 27948035  T
Q  118 tatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    | ||||||||||  || |||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  27948034 tgtttaataaatgaatatttatattctatttaagaaattttgatatagtagtgtgacatgccc 27947972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 23864925 - 23864834
Alignment:
Q  156 ttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||| | |||||||||||||||| | || |||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||||||||||    
T  23864925 ttgaaaacgaagtgtgacatgcccat-tagaattattactctgatgtgcgtttattttatt-aaataaattatatttgggaatggggtgttaca 23864834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 22176450 - 22176607
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatt 121  Q
    ||||||||||||||| || ||| | ||||| |||||| ||||||||  ||||  |||| |||||||||||||  | |||| || | ||  | ||||| ||    
T  22176450 aggcttttatgccaatattttactatggaggtttaaacagttgttgttgttttgatgagaatattccgctgctaaataaatgatgattctgatggatgtt 22176549  T
Q  122 taataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
     | |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  22176550 cattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 22176607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 22064245 - 22064301
Alignment:
Q  125 taaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  22064245 taaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgccc 22064301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 22248547 - 22248483
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  22248547 ggatatttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 22248483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 31419356 - 31419458
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgaca 174  Q
    |||| |||||||||||||  | |||| || | ||||| ||||| | |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  31419356 atgagaatattccgctgctaaataaatgatgatttcgatggatgtgtaataaatag-tttttatattctattt-agaaattttgaaaatgtagtgtgaca 31419453  T
Q  175 tgccc 179  Q
    |||||    
T  31419454 tgccc 31419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 21281506 - 21281452
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| |||||||| ||| || ||||||||||||||    
T  21281506 taaatagatttttatattctatttaagaaatttaaaattgaagtgtgacatgccc 21281452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 7302263 - 7302327
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  7302263 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 7302327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 21322901 - 21322965
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  21322901 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 21322965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 21327489 - 21327553
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  21327489 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 21327553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 36601156 - 36601092
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  36601156 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 36601092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 44494693 - 44494757
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  44494693 ggatgtttattaaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 44494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 31412917 - 31413019
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgaca 174  Q
    |||| |||||||||||||  | |||| || | ||||| ||||| | |||||||||| |||||||||| ||||| |||||||| |||||||||||||||||    
T  31412917 atgagaatattccgctgctaaataaatgatgttttcgatggatgtgtaataaatag-tttttatattatattt-agaaattttgaaaatgtagtgtgaca 31413014  T
Q  175 tgccc 179  Q
    |||||    
T  31413015 tgccc 31413019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 39021468 - 39021516
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  39021468 agttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctctt 39021516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 44430907 - 44430844
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcc 178  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  44430907 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcc 44430844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 45136052 - 45136111
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  45136052 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 45136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 6609372 - 6609426
Alignment:
Q  125 taaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  6609372 taaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 6609426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 22852861 - 22852912
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||||||||||| ||||||| |||||||||  ||||||||||||||    
T  22852861 aaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctctt 22852912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 28852949 - 28852895
Alignment:
Q  125 taaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  28852949 taaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 28852895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 11223882 - 11223932
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  11223882 aaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctctt 11223932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 21300846 - 21300892
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  21300846 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 21300892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 22989084 - 22989030
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| ||||||||  ||| |||| |||||||||||    
T  22989084 taaatagatttttatattctatttaagaaattttgaaaagtagcgtgacatgccc 22989030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 40842062 - 40842012
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  40842062 aaagttgtcaaaaagttatcacaaagtggttgtacaaatatcatttctctt 40842012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 19988868 - 19988915
Alignment:
Q  134 ttttatattctatttcagaaatttg--aaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||    
T  19988868 ttttatattctatttaagaaatttgtgaaaatgtagtgtgacatgccc 19988915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 21273737 - 21273781
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||    
T  21273737 ttgtcaagaagttgtcacaaaatggttgtacaaatatcatttctc 21273781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 28623134 - 28623182
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  28623134 aaagttgtcaaaaagttatcacataatggttgtacaaatatcatttctc 28623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 26294233 - 26294186
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttg 301  Q
    ||||||| ||||| |||||||||||||||||  |||||||||||||||    
T  26294233 ttgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26294186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 26307490 - 26307443
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttg 301  Q
    ||||||| ||||| |||||||||||||||||  |||||||||||||||    
T  26307490 ttgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 11773764 - 11773703
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatg 176  Q
    |||| |||| |||||||||||| ||||||||||| |||||| |||||||||||||||| ||||    
T  11773764 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgtcatg 11773703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 34949695 - 34949629
Alignment:
Q  115 ggatatttaataaatagatttttat-attctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||||||||| | |||||||||  |||| |||||||||||||||||||||||||    
T  34949695 ggatgtttattaaatagattttttttattctatttatgaaaatttgaaaatgtagtgtgacatgccc 34949629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 45101444 - 45101394
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  45101444 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 5239535 - 5239471
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| ||||| ||||| |||||| ||||||||||||    
T  5239535 ggatgtttattaaatag-tttttatattctatttaagaaattttgataatgtattgtgacatgccc 5239471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 11879513 - 11879566
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttgat 303  Q
    ||||||||||| ||||| ||||||| |||  |||| ||||||||||||||||||    
T  11879513 aaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctcttgat 11879566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 11896929 - 11896982
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttgat 303  Q
    ||||||||||| ||||| ||||||| |||  |||| ||||||||||||||||||    
T  11896929 aaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctcttgat 11896982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19852989 - 19852944
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  19852989 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 19852944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19859025 - 19858980
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  19859025 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 19858980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 20005849 - 20005804
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  20005849 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 20005804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 22026242 - 22026290
Alignment:
Q  125 taaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtg 171  Q
    |||||||||||| ||||||||||| |||||  |||||||||||||||||    
T  22026242 taaatagattttcatattctatttaagaaaattttgaaaatgtagtgtg 22026290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 37873128 - 37873177
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| ||||||||| ||||||||| |||  |||||||||||||    
T  37873128 aaagttgtcaaaaagttatcataaaatggttttacaaatatcatttctct 37873177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 18609637 - 18609569
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||||| | | |  ||||||||||||||    
T  18609637 ttttatattctatttacgaaattttgaaaatgaagtgtgacatgcccgttttgggttattactctgatg 18609569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 2e-87; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 5707559 - 5707800
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaacgacggt 108  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  5707559 attattctggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 5707657  T
Q  109 tt-cgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||     
T  5707658 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgtatgt 5707757  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||| |||||||||||||||||||| ||| |||||||||||||||    
T  5707758 tta-tttatttaaataaagtatatatgggaatggggtgttacaa 5707800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 21133917 - 21134067
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| ||||||||||||||    
T  21133917 tttatgccaagatattattttggaggtttaaagagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatatttaata 21134016  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgc 177  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  21134017 aatagatttttatattctattttagaaatttgaaaatgtagtatgacatgc 21134067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 36800099 - 36799947
Alignment:
Q  28 tttatgccaagatattattt-ggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaat 125  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||| ||||  ||||||||||||||||||  | |||| || | |||| ||| || ||||||    
T  36800099 tttatgccaagatattcttttggaggttttaaacagttgttgatgttttgatgataatattccgctgctaagtaaatgatgatttcattgaatgtttaat 36800000  T
Q  126 aaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcc 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36799999 aaatagatttttatattctattttagaaatttgaaaatgtagtgtgacatgcc 36799947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 43692929 - 43692777
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  43692929 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 43692830  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  43692829 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgccc 43692777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 25590735 - 25590886
Alignment:
Q  28 tttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaataa 127  Q
    |||||||||||||||||||||||| |||||| | ||||||| |||| | |||||||||||||||||  || ||  || | |||| |||||| ||||||||    
T  25590735 tttatgccaagatattatttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctaataaattgatgatttcattggatgtttaataa 25590833  T
Q  128 atagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  25590834 atagatttttatattctatttaagaaattttgatatagtagtgtgacatgccc 25590886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 27368172 - 27368324
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||  ||||||||||||||||||  |||||| |||| |||| |||||| |||| ||    
T  27368172 tttatgccaagatattattttggaggcttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgacgatttcattggatgtttatta 27368271  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  27368272 aatag--ttttatattctatttaagaaaaatttaaaaatgtagtgtgacatgccc 27368324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 22809511 - 22809354
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatt 121  Q
    |||||||||||||| ||  ||||| ||||| |||||| ||||||||  ||||  |||| |||||||||||||  | |||| || | ||| | ||||| ||    
T  22809511 aggcttttatgccaggaatttattatggaggtttaaacagttgttgttgttttgatgagaatattccgctgctaaataaatgatgattttgatggatgtt 22809412  T
Q  122 taataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    || |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  22809411 tattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 22809354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 26582161 - 26582066
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||| ||| |||||||||||| || | ||||||||||||||||||  ||||||| ||||||||| ||||||||| |||  |||||||||    
T  26582161 aaatttgaaaatgaagtatgacatgcccat-tgaaattattactctgatgtgtgtatatttta-ttaaataaattatatttgggaataaggtgttaca 26582066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 6031693 - 6031629
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  6031693 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 6031629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 20964652 - 20964716
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  20964652 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 20964716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 24503723 - 24503659
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  24503723 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 24503659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 25036742 - 25036806
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  25036742 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 25036806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 25040849 - 25040913
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  25040849 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 25040913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 31754979 - 31754915
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  31754979 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 31754915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 23062000 - 23061933
Alignment:
Q  134 ttttatattctatttcagaaatt-tgaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| | |||  ||||||||||||||    
T  23062000 ttttatattctatttaagaaattatgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 23061933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 23029694 - 23029748
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  23029694 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 23029748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 25108123 - 25108193
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtgg 185  Q
    |||| |||| ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||| |||||    
T  25108123 ggatgtttattaaatag-tttttatattcaatttaagaaattttgaaaatgtagtgtgacatgcccgtgtgg 25108193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 39247488 - 39247534
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||    
T  39247488 agttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 26321724 - 26321767
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttct 297  Q
    ||||||| |||||||||||||||||||||||  |||||||||||    
T  26321724 ttgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 26321892 - 26321935
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttct 297  Q
    ||||||| |||||||||||||||||||||||  |||||||||||    
T  26321892 ttgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 5954506 - 5954556
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||| | ||||||||||| |||||||||||  ||||||||||||||    
T  5954506 aaagttgtccaaaagttatcacataatggttgtacaaatatcatttctctt 5954556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 11229344 - 11229394
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||    
T  11229344 aaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttctctt 11229394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 21906746 - 21906700
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  21906746 ttttatattctatttaagaaattttgaaaatgaagtgtgacatgccc 21906700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 23169843 - 23169873
Alignment:
Q  14 ttctggttgaggcttttatgccaagatatta 44  Q
    |||||||||||||||||||||||||||||||    
T  23169843 ttctggttgaggcttttatgccaagatatta 23169873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 23263479 - 23263414
Alignment:
Q  135 tttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||| | |||  ||||||||||||||    
T  23263479 tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg-gttattactctgatg 23263414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 23268695 - 23268630
Alignment:
Q  135 tttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||| | |||  ||||||||||||||    
T  23268695 tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg-gttattactctgatg 23268630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 23581100 - 23581130
Alignment:
Q  14 ttctggttgaggcttttatgccaagatatta 44  Q
    |||||||||||||||||||||||||||||||    
T  23581100 ttctggttgaggcttttatgccaagatatta 23581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 31296868 - 31296918
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| | ||| |||||||||||||||||  ||||||||||||||    
T  31296868 aaagttgtcaaaacgttgtcacaaaatggttgtacaaatatcatttctctt 31296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 4738596 - 4738645
Alignment:
Q  251 aagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  4738596 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 4738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 33296095 - 33296144
Alignment:
Q  251 aagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  33296095 aagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 33296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 36909866 - 36909915
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||| | ||||| |||||||||||||||||  |||||||||||||    
T  36909866 aaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctct 36909915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 3039900 - 3039864
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  3039900 aagttatcacaaaatagttgtacgaatatcatttctc 3039864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 3091785 - 3091741
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||| ||||||||||||||| |||||||  ||||||||||||    
T  3091785 ttgtcaaaaagttatcacaaaatagttgtacaaatatcatttctc 3091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 4306 - 4551
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacg-gt 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  4306 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgatt 4405  T
Q  109 ttcgttggatatttaataaatagatttt-----tatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgt 202  Q
    ||| |||||||||| |||||||||||||     |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  4406 ttctttggatattttataaatagattttttatatatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgt 4505  T
Q  203 gtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
     || ||| ||||| ||||||||||||||| || ||||||||||||||    
T  4506 atgttta-tttatctaaataaagtatattcgggaatggggtgttaca 4551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 93 - 338
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacg-gt 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  93 attattctggttgaggcttttatgccaagatattgtttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgatt 192  T
Q  109 ttcgttggatatttaataaatagatttt-----tatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgt 202  Q
    ||| |||||||||| |||||||||||||     |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  193 ttctttggatattttataaatagattttttatatatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgt 292  T
Q  203 gtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
     || ||| ||||| ||||||||||||||| || ||||||||||||||    
T  293 atgttta-tttatctaaataaagtatattcgggaatggggtgttaca 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 7e-84; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 23527079 - 23526838
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattatttgga-gttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||||||||||||||| || | |||||| |||||| |||||||| |||||||||||||||||||||||||| || |     
T  23527079 attattctggttgaggctttttatgccaagatattattttgaaggtttaaacagttgtcgacgtttcgatgataatattccgctgcatattaaatgatga 23526980  T
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgct 207  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  23526979 tttcattggatgtttaacaaatagatttttatattctattccagaaatttgaaattgtagtgtgacatgcccatttggatttattactctgatgtgtgtt 23526880  T
Q  208 tattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  23526879 tattttatttaaataaagtatatttgggaatcgggtgttaca 23526838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 21676123 - 21676275
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  21676123 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 21676222  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  21676223 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgccc 21676275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 42242356 - 42242510
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| || ||| ||||||||| |||   |||||||| |||||||||  |||||| |  | ||||  ||||| |||| ||    
T  42242356 tttatgccaagatattattttggaggttaaaacagttgttgaagttgtgatgataattttccgctgctaattaaatgttgatttctctggatgtttagta 42242455  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccat 181  Q
    |||||||||||||||||||||| ||||| ||  |||||||||||  |||||||||    
T  42242456 aatagatttttatattctatttaagaaactttgaaatgtagtgtagcatgcccat 42242510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 22509813 - 22509869
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  22509813 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 22509869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 22759852 - 22759916
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  22759852 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 22759916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 22880070 - 22880006
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  22880070 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 22880006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 24669686 - 24669742
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  24669686 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 24669742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 24739455 - 24739511
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  24739455 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 24739511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 24752224 - 24752280
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  24752224 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 24752280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 33474542 - 33474606
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  33474542 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 33474606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 43120210 - 43120151
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  43120210 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 43120151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 19075490 - 19075436
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  19075490 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 19075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 21661863 - 21661816
Alignment:
Q  133 tttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  21661863 tttttatattctatttaagaaaatttgaaaatgtagtgtgacatgccc 21661816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 26660434 - 26660484
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  26660434 aaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctctt 26660484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 26932026 - 26932076
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  26932026 aaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctctt 26932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 30344822 - 30344864
Alignment:
Q  137 tatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  30344822 tatattctatttaagaaatttgaaattgtagtgtgacatgccc 30344864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 758910 - 758966
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  | ||||| |||||||||||| |||||||||||||||||    
T  758910 taaatagatttttatatattttatttaagaaatttgaaattgtagtgtgacatgccc 758966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 23433520 - 23433565
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||    
T  23433520 ttttatattctatttaagaaattttaaaaagtagtgtgacatgccc 23433565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 23444885 - 23444930
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||    
T  23444885 ttttatattctatttaagaaattttaaaaagtagtgtgacatgccc 23444930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 36713201 - 36713250
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||||||    
T  36713201 aaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctct 36713250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 43244394 - 43244458
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  43244394 ggatttttattaaatagatttt-atattctatttaacaaattttgaaaatgtagtgtgacatgccc 43244458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 302
Target Start/End: Complemental strand, 14914420 - 14914368
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttga 302  Q
    ||||||||| | ||||| |||||||||||||||||  ||||||||||||||||    
T  14914420 aaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctcttga 14914368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 43123743 - 43123684
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  43123743 tttattaaatagatttt-atattctatttaagaaattttgaaattgtagtgtgacatgccc 43123684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 31253688 - 31253742
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||    
T  31253688 taaatagatttt-atattctatttaagaaaatttgaaaatggagtgtgacatgccc 31253742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 3771032 - 3771078
Alignment:
Q  253 gttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||||    
T  3771032 gttgtcaaaaagttgtcacaaaatggttgtacagatatcatttctct 3771078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 6728904 - 6728965
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatg 176  Q
    |||| |||| |||||||||||| ||||||||||| | |||||| |||||||||||||||||||    
T  6728904 ggatgtttattaaatagatttt-atattctatttaataaattttgaaaatgtagtgtgacatg 6728965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 11768013 - 11768063
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||||    
T  11768013 aaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttctctt 11768063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 19127170 - 19127124
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||||    
T  19127170 agttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 19127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 23991157 - 23991207
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||| |||||| ||||||| |||||||||  ||||||||||||||    
T  23991157 aaagttgtcaggaagttgtcacaaagtggttgtacaaatatcatttctctt 23991207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 38500991 - 38500941
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| || || |||||||||||||||||  ||||||||||||||    
T  38500991 aaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 38500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 14323991 - 14324040
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||||||||| ||||||||||| ||| |  |||||||||||||    
T  14323991 aaagttgtcaagaagttgtcacaaaatggatgtgcaaatatcatttctct 14324040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 22379072 - 22378920
Alignment:
Q  30 tatgccaagatatta-tttggagttttaaatagttgttgacgtttcaatgataat-attccgctgcatattaaacgacggtttcgttggatatttaataa 127  Q
    ||||||||||||||| |||| |||||| |  ||||||||| | ||| ||| |||| ||||||||||  |||||| || | |||  |||||| ||| ||||    
T  22379072 tatgccaagatattattttgaagttttgatcagttgttgatg-ttcgatgttaataattccgctgccaattaaatgatgattttattggatgttttataa 22378974  T
Q  128 atagatttt-tatattcta-tttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||| ||||||||| ||| | || |||||||  ||||||||||||||||    
T  22378973 atagattttatatattctattttgaaaattttgaaatagtagtgtgacatgccc 22378920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 25013125 - 25013080
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  25013125 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 25013080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 35814489 - 35814452
Alignment:
Q  262 aagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    |||||||||||||||||||||||  |||||||||||||    
T  35814489 aagttatcacaaaatggttgtacaaatatcatttctct 35814452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 12718403 - 12718451
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||    
T  12718403 aaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 12779629 - 12779677
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||    
T  12779629 aaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21905970 - 21906014
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcc 178  Q
    ||||||||||||||| |||||||| | || |||||||||||||||    
T  21905970 ttttatattctatttaagaaattttagaaagtagtgtgacatgcc 21906014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 28260482 - 28260556
Alignment:
Q  19 gttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgca 94  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| | ||||||| ||||  ||||||||| |||||||||    
T  28260482 gttgaggcttt-atgccaagatattgttttggagttttaaacaattgttgatgttt-gatgataataatccgctgca 28260556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 34381060 - 34381012
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||    
T  34381060 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 39595320 - 39595272
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||    
T  39595320 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 42699105 - 42699057
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||||| |||| ||||| |||||||||||||||||  ||||||||||||    
T  42699105 aaagttatcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 42699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 155; Significance: 4e-82; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 10 - 249
Target Start/End: Complemental strand, 1664 - 1423
Alignment:
Q  10 attattctggttgaggcttttatgccaagatattatttggagttttaaatagttgttgacgttt-caatgataatattccgctgcatattaaacgacggt 108  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  1664 attattttggttg-ggcttttatgccaagatattgtttggagttttaaatagttgttgacgttttcaatgataatattccgctgcatattaaacgacgat 1566  T
Q  109 tt-cgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||     
T  1565 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgtatgt 1466  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||  || ||||||||||||| ||| ||||||||||||||    
T  1465 ttatttatttaaaataaagtatatatgggaatggggtgttaca 1423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 24744 - 24985
Alignment:
Q  10 attattctggttgaggctttt-atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacgg 107  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||| |||||| |||||||||| ||||  ||||||||||||||||||||||||| || |     
T  24744 attattctggttgaggctttttatgcagagatattattttggaggtttaaacagttgttgacatttcgttgataatattccgctgcatattaaatgatga 24843  T
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgct 207  Q
     ||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |    
T  24844 attcattggatgtttaataaatagatttttatattctatttcagaaatttgaaaatatagtgtgacatgcccatttggatttattactctgatgtgtgtt 24943  T
Q  208 tattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  24944 tattttatttaaataaattatatttgggaatggggtgttaca 24985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 33096581 - 33096429
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  |||||||||||||||||| ||||||| ||  ||||| |||||| |||||||    
T  33096581 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgcttattaaatgatagtttcattggatgtttaata 33096482  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  33096481 aatagatttttatattctattttagaaatctgaaaatgtagtgtgacatgccc 33096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 53482791 - 53482649
Alignment:
Q  108 tttcgttggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtgga-tttattactctgatgtgtgc 206  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||     
T  53482791 tttctttggatattttataaatagatttttatattctatttcagaaatttgaaaatgaagtgtgacatgcccatgtggattttatgactctgatgtatgt 53482692  T
Q  207 ttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||  || ||||||||||||| ||| ||||||||||||||    
T  53482691 ttatttatttaaaataaagtatatatgggaatggggtgttaca 53482649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 37880942 - 37880791
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||| ||||||||||||||| |||| |||||| ||||||||| ||||  |||||||||||||| |||  |||||| || | |||| |||||| ||||| |    
T  37880942 tttacgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccg-tgctaattaaatgatgatttcattggatgtttaaca 37880844  T
Q  127 aatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  37880843 aatagatttttatattctattt-agaaattttgaaaatgtagtctgacatgccc 37880791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 899147 - 898994
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||| |  | ||||  ||||| | |||||    
T  899147 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtgtaata 899049  T
Q  127 aatagatttttatattcta-tttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||||| ||| ||||| ||||| |  ||||||||||||||||    
T  899048 aatagatttttatattctattttaagaaattttgatatagtagtgtgacatgccc 898994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 8056313 - 8056408
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||||| |||||||||||||||| || | ||||||||||||||||||  ||||||| ||||||||  ||||||||| |||| |||||||||    
T  8056313 aaatttgaaaatgaagtgtgacatgcccat-tgaaattattactctgatgtgtgtatatttta-ttaaataatttatatttgggaatgaggtgttaca 8056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 41939995 - 41940066
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgcccatgtgga 186  Q
    ||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  41939995 ggatatttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgcccatttgga 41940066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 14480083 - 14479926
Alignment:
Q  23 aggcttttatgccaagatattatt-tggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatat 120  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||  ||||  |||| ||||||| |||||  | |||| |  | ||| | ||||| |    
T  14480083 aggcttttatgccaatattttattatggaggttttaaatagttgttgttgttttgatgagaatattctgctgctaaataaatggtgattt-gatggatgt 14479985  T
Q  121 ttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  14479984 ttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 14479926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 31664541 - 31664390
Alignment:
Q  29 ttatgccaagatattatttggagttttaaatag-ttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaataa 127  Q
    ||||||||||||||| ||||||||||||||    ||||||| |||| |   |||||||||||||||   ||||| || |  ||| |||||| ||||||||    
T  31664541 ttatgccaagatattgtttggagttttaaaaccattgttgatgtttgatgaataatattccgctgctgtttaaatgatgacttcattggatgtttaataa 31664442  T
Q  128 atagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    || |||||||||||||||||| | ||||||  |||||||||||  |||||||    
T  31664441 atggatttttatattctatttaataaattttgaaatgtagtgtagcatgccc 31664390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 10687568 - 10687514
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  10687568 taaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgccc 10687514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 10901208 - 10901154
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  10901208 taaatagatttttatattctatttgagaaatttgaaatagtagtgtgacatgccc 10901154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 14062444 - 14062382
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatg 176  Q
    |||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14062444 ggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatg 14062382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 46045470 - 46045599
Alignment:
Q  28 tttatgccaagatattatttggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    ||||||||||||| |||||||||| |||| || | | |||||  ||| | |||||||||||||||||   ||||  || | |||| |||||| |||||||    
T  46045470 tttatgccaagatgttatttggaggtttttaacaatcgttgatatttga-tgataatattccgctgccatttaattgatgatttcattggatgtttaata 46045568  T
Q  127 aatagatttttatattctatttcagaaattt 157  Q
    |||||||||||||||||||||| || |||||    
T  46045569 aatagatttttatattctatttaagtaattt 46045599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 55503806 - 55503870
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  55503806 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 55503870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 1031803 - 1031755
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  1031803 aaagttgtcaagaagttatcacaaagtggttgtacaaatatcatttctc 1031755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 4170000 - 4169941
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  4170000 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 4169941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 11846542 - 11846478
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatt 216  Q
    ||||||||||||| |||||||||||||| | |||  |||||||||||||| ||| ||||||||||    
T  11846542 aaatttgaaaatgaagtgtgacatgcccgtttgggattattactctgatgcgtgtttattttatt 11846478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 31132422 - 31132481
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  31132422 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 31132481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 33198499 - 33198347
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| || ||| |||||| || |||   |||||||| |||||||||  |||||| |  | |||| |   || |||| ||    
T  33198499 tttatgccaagatattattttggaggttaaaacagttgtagaagttgtgatgataattttccgctgctaattaaatgttgatttcttcaaatgtttacta 33198400  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||||||  | |||||||||  |||||||    
T  33198399 aatagatttttatattctatttaagaaattttgatatgtagtgtagcatgccc 33198347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 2585834 - 2585881
Alignment:
Q  133 tttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2585834 tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 2585881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 12931357 - 12931302
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  12931357 taaatagttttttatattctatttaagaaattttgaaattgtagtgtgacatgccc 12931302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 14697710 - 14697664
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14697710 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 14697664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 38982701 - 38982747
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  38982701 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 38982747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 41529731 - 41529788
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgc 177  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  41529731 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgc 41529788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11846687 - 11846638
Alignment:
Q  9 gattattctggttgaggcttttatgccaagatattatttggagttttaaa 58  Q
    |||| |||||||||||||||||||||| ||||||| | ||||||||||||    
T  11846687 gatttttctggttgaggcttttatgccgagatattttatggagttttaaa 11846638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 14485016 - 14484972
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcc 178  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||    
T  14485016 ttttatattctatttaagaaattttgaaatgtagtgtgacatgcc 14484972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 37839669 - 37839720
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatg 176  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  37839669 taaatagatttt-atattctatttgagaaaatttgaaaatgtagtgtgacatg 37839720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 40908123 - 40908037
Alignment:
Q  114 tggatatttaataaatagatttttatattctatttcagaaatttgaaaa-tgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||| |||| |||||||||||  ||||||||||| |||||||| |||| ||||||||||||||||| | ||| |||| ||||||||||    
T  40908123 tggatgtttattaaatagatttc-atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg-tttaatactctgatg 40908037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 45548806 - 45548854
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttct 297  Q
    |||||||||||| || ||||||||||||||||||||  |||||||||||    
T  45548806 aaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 13451594 - 13451507
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgctta 209  Q
    |||| ||||||| |||||||||||||||| ||||   |||||||||||||||||||||||| | |||  |  |||||||||||||||||||    
T  13451594 tttattaaatag-tttttatattctatttaagaatgcttgaaaatgtagtgtgacatgcccgtttgggat--ttactctgatgtgtgctta 13451507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 16220762 - 16220700
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgc 177  Q
    |||| |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  16220762 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgatatgc 16220700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 42598398 - 42598452
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||    
T  42598398 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgatatgccc 42598452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 4896523 - 4896573
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  4896523 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 4896573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 8056168 - 8056198
Alignment:
Q  10 attattctggttgaggcttttatgccaagat 40  Q
    |||||||||||||||||||||||||||||||    
T  8056168 attattctggttgaggcttttatgccaagat 8056198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 298
Target Start/End: Complemental strand, 15596442 - 15596396
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||||| ||||||| |||||||||  ||||||||||||    
T  15596442 agttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 23094424 - 23094374
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||| | |||||||||||||||| ||||||  ||||||||||||||    
T  23094424 aaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctctt 23094374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 27904749 - 27904692
Alignment:
Q  125 taaatagatttttatatt--ctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||||  |||||| |||||||| || |||||||||||||||||||    
T  27904749 taaatagatttttatattttctatttaagaaattttgataatgtagtgtgacatgccc 27904692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 30395604 - 30395536
Alignment:
Q  114 tggatatttaataaatagatttt--tatattctatttcagaaatttg--aaaatgtagtgtgacatgcc 178  Q
    ||||| ||| |||||||||||||  |||||||||||| ||||||||   ||||||||||||||||||||    
T  30395604 tggatgtttcataaatagattttcttatattctatttaagaaattttgaaaaatgtagtgtgacatgcc 30395536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 36444418 - 36444468
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||| || ||||||||| |||||||||||||  ||||||||||||||    
T  36444418 aaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctctt 36444468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 44170642 - 44170692
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| || |||| |||||||||||||||  ||||||||||||||    
T  44170642 aaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctctt 44170692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 47998643 - 47998593
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    |||||||||||| ||||| | |||||||||||||||  |||||||||||||    
T  47998643 aaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctct 47998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 51318747 - 51318701
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  51318747 ttgtcaaaaagttatcacaaagtggttgtacaaatatcatttctctt 51318701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 51717305 - 51717355
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||| |||||||||| ||||||| |||||||||  ||||||||||||||    
T  51717305 aaagttatcaagaagttgtcacaaattggttgtacaaatatcatttctctt 51717355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 11171855 - 11171928
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaat-aaatagatttttatattctattt 148  Q
    |||| |||||||||||||| ||| || |||  |||||  |||| |||||| |||||||||||||||||||||||    
T  11171855 atgagaatattccgctgcagatttaatgacaatttcgaaggatgtttaattaaatagatttttatattctattt 11171928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 14992307 - 14992352
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  14992307 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 14992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15005654 - 15005699
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  15005654 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 15005699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 16484100 - 16484055
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  16484100 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 16484055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 18260786 - 18260741
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  18260786 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 18260741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 18270749 - 18270704
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  18270749 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 18270704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30237240 - 30237195
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  30237240 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 30237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30873307 - 30873262
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||| || |||| ||||||||||||||||    
T  30873307 ttttatattctatttaagaaaatttaaaaagtagtgtgacatgccc 30873262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 169529 - 169573
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||| ||||| |||||||||||||||||  ||||||||||||    
T  169529 ttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 1651733 - 1651781
Alignment:
Q  141 ttctatttcagaaat-ttgaaaatgtagtgtgacatgcccatgtggatt 188  Q
    |||||||| |||||| ||||||||| |||||||||||||| ||||||||    
T  1651733 ttctatttaagaaatcttgaaaatgaagtgtgacatgcccgtgtggatt 1651781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 30042178 - 30042134
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||| |||||||| |||||||||||||||||  ||||||||||||    
T  30042178 ttgttaagaagttgtcacaaaatggttgtacaaatatcatttctc 30042134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 31240696 - 31240648
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||||||| || ||||||||||||| |||||||||  ||||||||||||    
T  31240696 aaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctc 31240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 39010160 - 39010208
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||| |||||| ||||| |||||||||||||||||  ||||||||||||    
T  39010160 aaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 39010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 9e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 24123899 - 24124051
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  24123899 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 24123998  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  24123999 aatag--ttttatattctatttaagaaaaatttgaaaatgtagtgtgacatgccc 24124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 29550467 - 29550307
Alignment:
Q  19 gttgaggcttttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttgga 117  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||| |||| | |||| ||||||||||||  |||||| || | |||| |||||    
T  29550467 gttgaggcttt-atgccaagatattgttttggagttttaaatagttgttgatgtttga-tgatgatattccgctgctgattaaatgatgatttcattgga 29550370  T
Q  118 tatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    | ||||||||||||||||||| ||||||||| ||||| ||||| |  ||||||||||||||||    
T  29550369 tgtttaataaatagatttttacattctatttaagaaattttgatatagtagtgtgacatgccc 29550307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 49162754 - 49162600
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| ||||||||||| | ||||||| |||| | |||||||||||||||||  |||||| |  | ||||  ||||| |||||||    
T  49162754 tttatgccaagatattattttggagttttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtttaata 49162656  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccat 181  Q
    |||||||||||||||||||||| ||||| ||||| |  ||||||||||||||||||    
T  49162655 aatagatttttatattctatttaagaaattttgatatagtagtgtgacatgcccat 49162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 18957364 - 18957210
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |  ||| ||||||||| ||||  ||||||||||||||||||  |||||| |  | |||| |||||| |||||||    
T  18957364 tttatgccaagatattattttggaggtcaaaacagttgttgatgttttgatgataatattccgctgctaattaaatgttgatttctttggatgtttaata 18957265  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaa-tgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  18957264 aatagatttttatattctatttaagaaattttgaaaagagtagtgtgacatgccc 18957210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 41456827 - 41456936
Alignment:
Q  141 ttctatttcagaaatttgaaaatgtagtgtgacatgccca-tgtggattta-ttactctgatgtgtgcttattttatttaaataaagtatatttggaaat 238  Q
    |||||||| |||  |||||||||| ||||||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||||| ||||||||| |||    
T  41456827 ttctatttaagagttttgaaaatgaagtgtgacatgcccaatttgaatttaattactctgatgtgtgtttattttatt-aaataaattatatttgggaat 41456925  T
Q  239 ggggtgttaca 249  Q
    |||||||||||    
T  41456926 ggggtgttaca 41456936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 179
Target Start/End: Complemental strand, 12418935 - 12418782
Alignment:
Q  28 tttatgccaagatattatttg-gagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    ||||||||| ||| ||||||  ||| |||||| ||||||||  ||||  ||||||||||||||||||  | |||| || | ||||  ||||| |||||||    
T  12418935 tttatgccatgattttattttcgaggtttaaacagttgttgttgttttgatgataatattccgctgctaaataaatgatgatttcaatggatgtttaata 12418836  T
Q  127 aatagatttttatattctatttca-gaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||||||| | ||| ||| |||| ||| ||||||||||||    
T  12418835 aatagatttttatattctatttaaggaattttaaaaaagtattgtgacatgccc 12418782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 16490886 - 16490791
Alignment:
Q  155 tttgaaaatgtagtgtgacatgccca-tgtggattta-ttactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||||||||||||||||||||||| | || ||||| ||||||||||||||| |||| || || ||||||| ||||||||| ||||||||||||||    
T  16490886 tttgaaaatgtagtgtgacatgcccaatttgaatttaattactctgatgtgtgtttatcttgtt-aaataaattatatttgggaatggggtgttaca 16490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 18757694 - 18757773
Alignment:
Q  123 aataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtg 205  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| | ||| ||  |||||||||||||||    
T  18757694 aataaatag-tttttatattctatttaagaattttgaaaatgtagtgtgacatgcccgtttgggtt--ttactctgatgtgtg 18757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 14292330 - 14292167
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagtt---gttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggat 118  Q
    |||||||||||||||||  ||||| ||||| |||||| ||||   ||||  ||||  |||| |||||||||||||| ||| || ||   ||| |  ||||    
T  14292330 aggcttttatgccaagaatttattatggaggtttaaacagttattgttgttgttttgatgagaatattccgctgcagatttaatgataattttggaggat 14292231  T
Q  119 atttaat-aaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgccc 179  Q
     |||||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  14292230 gtttaattaaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgccc 14292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 14542398 - 14542235
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagtt---gttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggat 118  Q
    |||||||||||||||||  ||||| ||||| |||||| ||||   ||||  ||||  |||| |||||||||||||| ||| || ||   ||| |  ||||    
T  14542398 aggcttttatgccaagaatttattatggaggtttaaacagttattgttgttgttttgatgagaatattccgctgcagatttaatgataattttgaaggat 14542299  T
Q  119 atttaat-aaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgccc 179  Q
     |||||| ||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||    
T  14542298 gtttaattaaatagatttttatattctatttaagaaaattttaaaaatgtagtgtgacatgccc 14542235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 55344323 - 55344369
Alignment:
Q  254 ttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||    
T  55344323 ttgtcaagaagttatcacaaaatggttgtacaaatatcatttctctt 55344369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 40602 - 40538
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaat-ttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  40602 ggatgtttattaaatagatttt-atattctatttaagaaatcttgaaaatgtagtgtgacatgccc 40538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 2249686 - 2249750
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  2249686 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 2249750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 2270910 - 2270974
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2270910 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 2270974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 18719760 - 18719845
Alignment:
Q  125 taaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattt 212  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| | |||  | ||||||||||||| || ||||||    
T  18719760 taaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg--taattactctgatgtatgtttattt 18719845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 20187148 - 20187092
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||    
T  20187148 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 20187092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 54900761 - 54900825
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  54900761 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 54900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 15518551 - 15518484
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  15518551 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 15518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 20377867 - 20378018
Alignment:
Q  28 tttatgccaagatattatttggag-ttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| ||| |||||||   ||||||  |||| | |||||||||||||||||  |||||| |  | | ||  ||||| |||||||    
T  20377867 tttatgccaagatattattttgaggttttaaactattgttggtgtttga-tgataatattccgctgctgattaaatgttgatgtctatggatgtttaata 20377965  T
Q  127 aatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||| ||| ||||||||||||   |||||||| |  ||||||||||||||||    
T  20377966 aatagttttctatattctatttttaaaatttgatatggtagtgtgacatgccc 20378018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 5840767 - 5840713
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  5840767 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 5840713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 13325521 - 13325591
Alignment:
Q  132 atttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgt 202  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| | |||  |||||||||||||||    
T  13325521 atttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg-gttattactctgatgt 13325591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 45221440 - 45221494
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  45221440 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 45221494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 47849720 - 47849670
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| || ||||||||||||||||||||  ||||||||||||||    
T  47849720 aaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctctt 47849670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 13303932 - 13304000
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgt 202  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||| | |||  |||||||||||||||    
T  13303932 ttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg-gttattactctgatgt 13304000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 13314608 - 13314676
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgt 202  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||| | |||  |||||||||||||||    
T  13314608 ttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgg-gttattactctgatgt 13314676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 14648919 - 14648983
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  14648919 ggatttttattaaatagatttt-atattctatttaacaaattttgaaaatgtagtgtgacatgccc 14648983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 20380912 - 20380960
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||||||||| ||||||| |||||||||  ||||||||||||    
T  20380912 aaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 17495631 - 17495584
Alignment:
Q  133 tttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  17495631 tttttataatctatttaagaaattttgaaaatgtagtgtgacatgccc 17495584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 48945896 - 48945845
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||| ||||||||||||| ||||||| |||||||||  ||||||||||||||    
T  48945896 aaaaattgtcaagaagttgtcacaaagtggttgtacaaatatcatttctctt 48945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 11851402 - 11851444
Alignment:
Q  137 tatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||| |||||| |||||||||||||||||    
T  11851402 tatattctatttaagaaaattgaaattgtagtgtgacatgccc 11851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 11957306 - 11957371
Alignment:
Q  114 tggatatttaataaatagatttt--tatattctatttcagaaattt-gaaaatgtagtgtgacatg 176  Q
    ||||| ||| |||||||||||||  ||||||| |||| |||||||| |||||||||||||||||||    
T  11957306 tggatgtttcataaatagattttcttatattcaatttaagaaattttgaaaatgtagtgtgacatg 11957371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 12356672 - 12356718
Alignment:
Q  133 tttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||||||    
T  12356672 tttttatattctatttaagaaaatttgaaatgtagtgtgacatgccc 12356718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 16830678 - 16830720
Alignment:
Q  137 tatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| |||||||||||| ||| |||||||||||||    
T  16830678 tatattctatttaagaaatttgaaattgtggtgtgacatgccc 16830720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 30796636 - 30796686
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    |||||||||||||||||| ||||||| ||||||| |  |||||||||||||    
T  30796636 aaaagttgtcaagaagttgtcacaaagtggttgtgcaaatatcatttctct 30796686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 54972306 - 54972260
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  54972306 ttttatattctatttaagaaattttgaaaatgaagtgtgacatgccc 54972260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 54974916 - 54974870
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  54974916 ttttatattctatttaagaaattttgaaaatgaagtgtgacatgccc 54974870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 54977526 - 54977480
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  54977526 ttttatattctatttaagaaattttgaaaatgaagtgtgacatgccc 54977480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 1295381 - 1295332
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||||||||| | ||||||||||||||| |||||||  ||||||||||||    
T  1295381 aaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8374730 - 8374775
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||| |||||||| |||||||||||||||||||||  |||||||    
T  8374730 ttttattttctatttaagaaatttgaaaatgtagtgtagcatgccc 8374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 13037612 - 13037657
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  13037612 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 13037657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 13043977 - 13044022
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  13043977 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 13044022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15935688 - 15935733
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  15935688 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 15935733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 15937538 - 15937583
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  15937538 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 15937583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 16802992 - 16803029
Alignment:
Q  9 gattattctggttgaggcttttatgccaagatattatt 46  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  16802992 gatttttctggttgaggcttttatgccaagattttatt 16803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 462424 - 462472
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||| | ||||| |||||||||||||||||  ||||||||||||    
T  462424 aaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 9027921 - 9027873
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    |||||| |||| ||||||||||||| |||||||||  ||||||||||||    
T  9027921 aaagttatcaaaaagttatcacaaagtggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 20893265 - 20893313
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| || ||||||||||||||||||||  |||| |||||||    
T  20893265 aaagttgtcaaaaaattatcacaaaatggttgtacaaatattatttctc 20893313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 51464295 - 51464343
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctc 298  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||    
T  51464295 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 22698 - 22847
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  22698 tttatgccaagatattattttggaggtttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgatgatttcattggatgtttatta 22797  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||| |||||||||||||||    
T  22798 aatag--ttttatattctatttaagaaaaatttgaatatgtagtgtgacatg 22847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 19878 - 20027
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||  ||||||||||||||||||  |||||| || | |||| |||||| |||| ||    
T  19878 tttatgccaagatattattttggaggcttaaacagttgttgatgttttgatgataatattccgctgctaattaaatgaagatttcattggatgtttatta 19977  T
Q  127 aatagatttttatattctatttcag--aaatttgaaaatgtagtgtgacatg 176  Q
    |||||  ||||||||||||||| ||  ||||||||| |||||||||||||||    
T  19978 aatag--ttttatattctatttaagaaaaatttgaatatgtagtgtgacatg 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 116314 - 116218
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||||||||||| | |||||||||||||||| |||| |||||||||||||||||| |||||||| || |||||| ||||||||| |||||||||||||||    
T  116314 aaatttgaaaacgaagtgtgacatgcccat-tggaattattactctgatgtgtgtttatttta-ttgaataaattatatttgggaatggggtgttacaa 116218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 110245 - 110150
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||| | |||||||||||||||| |||| |||||| ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||    
T  110245 aaatttgaaaacgaagtgtgacatgcccat-tggaattattagtctgatgtgtgtttattttatt-aaataaattatatttgggaatggggtgttaca 110150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 48538 - 48441
Alignment:
Q  151 gaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||  ||||||| ||||||||| ||||||| |  |||||||||||||    
T  48538 gaaatttgaaaatgaagtgtgacatgcccatttggaattattactctgatgtgtgtatatttta-ttaaataaattatattttgggatggggtgttaca 48441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 178
Target Start/End: Complemental strand, 40833 - 40682
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||| |  | ||||  ||||| | |||||    
T  40833 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgttgatttctatggatgtgtaata 40735  T
Q  127 aatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcc 178  Q
    |||||||||||||||||||||| ||||| ||||| |  |||||||||||||||    
T  40734 aatagatttttatattctatttaagaaattttgatatagtagtgtgacatgcc 40682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 268 - 364
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||||||||||| | |||||||||||||||| | || |||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||||||||||    
T  268 aaatttgaaaacgaagtgtgacatgcccat-tagaattattactctgatgtgcgtttattttatt-aaataaattatatttgggaatggggtgttacaa 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 5e-20; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 16780 - 16684
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttacaa 250  Q
    ||||||||||||| ||| |||||||||||| || | ||||||||||||||||||  ||||||||| ||||||| ||||||||| |||||||||||||||    
T  16780 aaatttgaaaatgaagtttgacatgcccat-tgaaattattactctgatgtgtgtatattttatt-aaataaattatatttgggaatggggtgttacaa 16684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 33947 - 33883
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33947 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 33883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 16006 - 15952
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||    
T  16006 taaatagatttt-atattctatttaagaaaatttgaaaatgaagtgtgacatgccc 15952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 23510 - 23457
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcc 178  Q
    |||||||||||| ||||||||||| ||||| |||||||||| |||||||||||||    
T  23510 taaatagatttt-atattctatttaagaaaatttgaaaatgaagtgtgacatgcc 23457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 41158 - 41202
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcc 178  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||||    
T  41158 ttttatattctatttaagaaattttgaaaagtagtgtgacatgcc 41202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 10325 - 10420
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||| | |||||||||||||||| |||| ||||||||||||||||   |||||||||| ||||||| ||||||||| ||||||||||||||    
T  10325 aaatttgaaaacgaagtgtgacatgcccat-tggaattattactctgatgtgcatttattttatt-aaataaattatatttgggaatggggtgttaca 10420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 646 - 741
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatttaaataaagtatatttggaaatggggtgttaca 249  Q
    ||||||||||| | |||||||||||| ||| | || |||||||| ||||||| | |||||||||| ||||||| ||||||||||||||||||||||||    
T  646 aaatttgaaaacgaagtgtgacatgcgcat-tagaattattactttgatgtgcgtttattttatt-aaataaattatatttggaaatggggtgttaca 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 16506 - 16409
Alignment:
Q  81 aatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgc 177  Q
    |||||||||||||| ||| || || | ||| |  |||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  16506 aatattccgctgcaaatttaatgatgattttgaaggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgc 16409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 125119 - 125184
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  125119 ggatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 125184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 28609 - 28654
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||    
T  28609 ttttatattctatttaagaaattttaaaaagtagtgtgacatgccc 28654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 32237 - 32340
Alignment:
Q  76 atgataatattccgctgcatattaaacgacggtttcgttggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgaca 174  Q
    |||| |||||||||||||  | |||| || | |||||||||||  ||||||||||| |||||||||||||||| || ||||| |||||||||||||||||    
T  32237 atgagaatattccgctgctgaataaatgatgatttcgttggatgcttaataaatag-tttttatattctatttaaggaattttgaaaatgtagtgtgaca 32335  T
Q  175 tgccc 179  Q
    |||||    
T  32336 tgccc 32340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 2087 - 1958
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttattta 218  Q
    |||| ||||||| ||| ||| |||||||| ||||| |||||||||| |||||||||||||| | |||  |||||||||||||| ||| |||||||| |||    
T  2087 tttattaaatagttttatat-ttctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgggattattactctgatgcgtgtttatttta-tta 1990  T
Q  219 aataaagtatatttggaaatggggtgttacaa 250  Q
    |||||   |||||||| || ||||||||||||    
T  1989 aataattgatatttgggaacggggtgttacaa 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 2202 - 2151
Alignment:
Q  7 tagattattctggttgaggcttttatgccaagatattatttggagttttaaa 58  Q
    |||||| |||||||||||||||||||||||||||||| | | ||||||||||    
T  2202 tagatttttctggttgaggcttttatgccaagatattttatagagttttaaa 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 102271 - 102431
Alignment:
Q  19 gttgaggcttttatgccaagatatta-tttggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttgga 117  Q
    ||||||||||| |||||||||||||  |||||||||||| |||||||||||  ||| | |||||||||||||||||  |||||| || | |||  |||||    
T  102271 gttgaggcttt-atgccaagatattgctttggagttttagatagttgttgatatttga-tgataatattccgctgctgattaaatgatgattttattgga 102368  T
Q  118 tatttaataaataga--tttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgc 177  Q
    | ||||||||||| |  |||||| ||||||||| ||||| ||||| |  ||||||||||||||    
T  102369 tgtttaataaataaatttttttacattctatttaagaaattttgatatagtagtgtgacatgc 102431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 1760 - 1827
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  1760 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg-gttattactctgatg 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 8696 - 8763
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  8696 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg-gttattactctgatg 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 21107 - 21162
Alignment:
Q  125 taaatagatttttatattctatttcagaaa--tttgaaaatgtagtgtgacatgcc 178  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  21107 taaatagatttttatattctatttaagaaaattttgaaaatgtagtgtgacatgcc 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 74754 - 74903
Alignment:
Q  31 atgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaataaat 129  Q
    ||||||| ||||||||| |||| |||||| | ||||||| |||| | |||||||||||||||||  |||||| |  | || |  ||||| |||||| |||    
T  74754 atgccaaaatattattttggaggtttaaacaattgttgatgtttga-tgataatattccgctgctgattaaatgctgattactatggatgtttaatgaat 74852  T
Q  130 agatttttatattctatttcagaaa-tttga-aaatgtagtgtgacatgccc 179  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||    
T  74853 agatttt-atattctatttaagaaattttgataaatgtagtgtgacatgccc 74903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1340 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 1923 - 1859
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  1923 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 12100 - 12036
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  12100 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 12036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 1087 - 1143
Alignment:
Q  125 taaatagatttttata--ttctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||    
T  1087 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 1143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 16908 - 16973
Alignment:
Q  126 aaatagatttttatatt--ctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggattt 189  Q
    ||||||||||||||||   |||||| |||||||||||| ||||||||||||||||| | |||||||    
T  16908 aaatagatttttatatatactatttaagaaatttgaaattgtagtgtgacatgcccgtttggattt 16973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 8031 - 7985
Alignment:
Q  133 tttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||||    
T  8031 tttttatattctatttaagaatttttgaaatgtagtgtgacatgccc 7985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 15933 - 15887
Alignment:
Q  133 tttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| |||| |||  ||||||||||||||||||||    
T  15933 tttttatattctatttaagaatttttgaaatgtagtgtgacatgccc 15887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 14068 - 14125
Alignment:
Q  123 aataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||    
T  14068 aataaatagatttttaaattttatttaagaaattttgaaaatgtagtgtgacatgccc 14125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 55445 - 55381
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  55445 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 55381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 251409 - 251345
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  251409 ggatgtttattaaatag-tttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 251345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 198116 - 198183
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  198116 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 198183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 258028 - 257964
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||    
T  258028 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgatatgccc 257964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 219687 - 219737
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| ||||| ||||||| |||||||||  ||||||||||||||    
T  219687 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 194623 - 194567
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||    
T  194623 taaatagatttttatatattctatttaagaaatttgaaattgtagtgtgacatgccc 194567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 136906 - 136843
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcc 178  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  136906 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcc 136843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 5022 - 4955
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  5022 ttttattttctatttaagaaattttgaaaatgtagtgtgacatgcccatttgg-gttattactctgatg 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 1329 - 1396
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | |||  ||||||||||||||    
T  1329 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgg-gttattactctgatg 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 32164 - 32105
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  32164 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 32105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 82648 - 82707
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  82648 tttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatgccc 82707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 488602 - 488546
Alignment:
Q  160 aaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatt 216  Q
    ||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||    
T  488602 aaatgaagtgtgacatgcccatttggaaatattactctgatgtgtgtttattttatt 488546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 95366 - 95310
Alignment:
Q  123 aataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  95366 aataaatag-ttttaatattctatttgagaaattttgaaaatgtagtgtgacatgccc 95310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 452421 - 452466
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||    
T  452421 ttttatattctatttaagaaattttaaaaagtagtgtgacatgccc 452466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 1534 - 1487
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccat 181  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  1534 ttttatattctatttaagaaatttggaaaagtagtgtgacatgcccat 1487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 6552 - 6505
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcccat 181  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  6552 ttttatattctatttaagaaattttaaaaagtagtgtgacatgcccat 6505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 3771 - 3825
Alignment:
Q  125 taaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  3771 taaatagatttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgccc 3825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 6882 - 6728
Alignment:
Q  23 aggcttttatgccaagatattatt-tggagttttaaatagttgttgacgtt--tcaatgataatattccgctgcatattaaacgacggtttcgttggata 119  Q
    |||||||||||||||||| | ||| ||||| ||||||||| |||||  |||  |  ||||  ||||||||||||| |||||| || | ||| |  ||||     
T  6882 aggcttttatgccaagatttaattatggagatttaaatagatgttgttgttgtttgatgaacatattccgctgcaaattaaatgaagattttgaaggatg 6783  T
Q  120 tttaataaatagatttttatattctatttcaga-aatttgaaaatgtagtgtgac 173  Q
    |||| |||||||||||||| ||||||||| ||| | ||||||||| |||||||||    
T  6782 tttattaaatagatttttacattctatttaagacattttgaaaatatagtgtgac 6728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 1083 - 1129
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  1083 ttttatattctatttaagaaaatttgaaaatgtagtgtgacatgccc 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 27948 - 28101
Alignment:
Q  28 tttatgccaagatattattt-ggagttttaaatagttgttgacgtttcaatgataatattccgctgcatattaaacgacggtttcgttggatatttaata 126  Q
    |||||||||||||||||||| |||| |||||| | ||||||| |||| | |||||||||||| ||||  |||||| |     |||  |||||  ||||||    
T  27948 tttatgccaagatattattttggaggtttaaacaattgttgatgtttga-tgataatattccactgctgattaaatgttaacttccgtggatgattaata 28046  T
Q  127 aatagatttt-tatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||| |||||||||||| ||||| ||||| |  ||||||||||||||||    
T  28047 aatagattttttatattctatttaagaaattttgatatagtagtgtgacatgccc 28101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 33663 - 33602
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatg 176  Q
    |||| |||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  33663 ggatttttattaaatagatttt-atattctatttaagaaattttgaaaatgtagtgtgacatg 33602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 18841 - 18887
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18841 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgccc 18887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 24468 - 24514
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  24468 ttttatactctatttaagaaattttgaaaatgtagtgtgacatgccc 24514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 8335 - 8271
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  8335 ggatgtttattaaatagatttt-atattctatttaataaattttgaaaatgtagtgtgacatgccc 8271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 4363 - 4314
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctct 299  Q
    ||||||||||| ||||||||| |||||||||||||  |||||||||||||    
T  4363 aaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctct 4314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 5831 - 5876
Alignment:
Q  133 tttttatattctatttcagaaattt-gaaaatgtagtgtgacatgc 177  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  5831 tttttatattctatttaagaaattttgaaaatgtagtgtgacatgc 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 17526 - 17593
Alignment:
Q  115 ggatatttaataaataga--tttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| ||||||||  |||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  17526 ggatgtttattaaatagagttttttatattctatttaagaaaatttgaaaatgtagcgtgacatgccc 17593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 16726 - 16793
Alignment:
Q  134 ttttatattctatttcagaaattt-gaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| | |||  ||||||||||||||    
T  16726 ttttatattctatttaagaaattttgaaaatgtattgtgacatgcccgtttgg-gttattactctgatg 16793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 17462 - 17398
Alignment:
Q  152 aaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatgtgtgcttattttatt 216  Q
    ||||||||||||| |||||||||||||| | |||  |||||||||||||  ||| ||||||||||    
T  17462 aaatttgaaaatgaagtgtgacatgcccgtttgggattattactctgattcgtgtttattttatt 17398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 673 - 731
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||| ||||||| |||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  673 tttattaaatag-tttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 782 - 717
Alignment:
Q  135 tttatattctatttcagaaatttgaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||| | |||  ||||||||||||||    
T  782 tttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttgg-gttattactctgatg 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 7391 - 7437
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  7391 ttttatattctatttaagaaaatttgaaaatgtagtgcgacatgccc 7437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 17605 - 17651
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  17605 ttttatattctatttaagaaaatttgaaaatgtagtgcgacatgccc 17651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 27387 - 27337
Alignment:
Q  250 aaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    ||||||||||| || || ||||||||||| ||||| |||||||||||||||    
T  27387 aaagttgtcaaaaaattgtcacaaaatggatgtacatatatcatttctctt 27337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 52361 - 52413
Alignment:
Q  125 taaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||    
T  52361 taaatagatttt-atactctatttaagaa-tttgaaaatgtagtgtgacatgccc 52413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 172460 - 172520
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| ||||   |||||||||||||||||||||||    
T  172460 ggatgtttattaaatagatttt-atattctatttaagaa---tgaaaatgtagtgtgacatgccc 172520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 4775 - 4820
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  4775 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 6550 - 6610
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaa-tttgaaaatgtagtgtgacat 175  Q
    |||| |||| |||||||||||| ||||||||||| ||||| |||||||||||| ||||||||    
T  6550 ggatgtttattaaatagatttt-atattctatttaagaaattttgaaaatgtaatgtgacat 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 4778 - 4823
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  4778 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 20135 - 20090
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  20135 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 20090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 9876 - 9824
Alignment:
Q  125 taaatagatttttatat--tctatttcagaaatttgaaaatgtagtgtgacat 175  Q
    |||||||||||||||||  ||||||| |||||||||||| | |||||||||||    
T  9876 taaatagatttttatatattctatttaagaaatttgaaattatagtgtgacat 9824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 8827 - 8782
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  8827 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 8782  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 6435 - 6386
Alignment:
Q  133 tttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccat 181  Q
    |||||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  6435 tttttatattctatttaagaaatttttaaaatgtggtgtgacatgcccat 6386  T

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Target: scaffold0109 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 1397 - 1333
Alignment:
Q  115 ggatatttaataaatagatttttatattctatttcagaaattt-gaaaatgtagtgtgacatgccc 179  Q
    |||| |||| |||||||||||| ||||||||||| |||  ||| ||||||||||||||||||||||    
T  1397 ggatgtttattaaatagatttt-atattctattttagattttttgaaaatgtagtgtgacatgccc 1333  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 56610 - 56655
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  56610 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 56655  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 18108 - 18153
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  18108 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 18153  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 62467 - 62512
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  62467 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 62512  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 61698 - 61743
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  61698 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 61743  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 60518 - 60465
Alignment:
Q  249 aaaagttgtcaagaagttatcacaaaatggttgtacgtatatcatttctcttga 302  Q
    |||||||||||| ||||| | | |||||||||||||  ||||||||||||||||    
T  60518 aaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcttga 60465  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 208243 - 208288
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||    
T  208243 ttttatattctatttaagaaattttgaaaagtagtgtgacatgccc 208288  T

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Target: scaffold0990 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 3373 - 3329
Alignment:
Q  134 ttttatattctatttcagaaatttgaaaatgtagtgtgacatgcc 178  Q
    ||||||||||| ||| |||||||| |||| |||||||||||||||    
T  3373 ttttatattctgtttaagaaattttaaaaagtagtgtgacatgcc 3329  T

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Target: scaffold0592 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 8332 - 8380
Alignment:
Q  252 agttgtcaagaagttatcacaaaatggttgtacgtatatcatttctctt 300  Q
    |||||| |||||||| |||||||||||||||||  |||| |||||||||    
T  8332 agttgttaagaagttgtcacaaaatggttgtacaaatataatttctctt 8380  T

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Target: scaffold0355 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 2198 - 2241
Alignment:
Q  134 ttttatattctatttcagaaa--tttgaaaatgtagtgtgacat 175  Q
    ||||||||||||||| |||||  |||||||||||||||||||||    
T  2198 ttttatattctatttaagaaaaatttgaaaatgtagtgtgacat 2241  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 8400 - 8467
Alignment:
Q  134 ttttatattctatttcagaaa-tttgaaaatgtagtgtgacatgcccatgtggatttattactctgatg 201  Q
    |||||||| |||||| ||||| |||||||||| |||||||||||||| | |||  ||||||||||||||    
T  8400 ttttatatcctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgg-gttattactctgatg 8467  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 14617 - 14577
Alignment:
Q  114 tggatatttaataaatagatttttatattctatttcagaaa 154  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  14617 tggatgtttcataaatagatttttatattctatttaagaaa 14577  T

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Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 18627 - 18587
Alignment:
Q  114 tggatatttaataaatagatttttatattctatttcagaaa 154  Q
    ||||| ||| ||||||||||||||||||||||||| |||||    
T  18627 tggatgtttcataaatagatttttatattctatttaagaaa 18587  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 115231 - 115187
Alignment:
Q  135 tttatattctatttcagaaatttgaaaatgtagtgtgacatgccc 179  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||    
T  115231 tttatattctatttaagaaattttgaaaagtagtgtgacatgccc 115187  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 320591 - 320532
Alignment:
Q  120 tttaataaatagatttttatattctatttcagaaatttg-aaaatgtagtgtgacatgccc 179  Q
    |||| |||||||||||||  |||||||||  |||||||| |||||||||||||||||||||    
T  320591 tttattaaatagatttttc-attctatttatgaaatttggaaaatgtagtgtgacatgccc 320532  T

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