View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19264_high_34 (Length: 238)
Name: NF19264_high_34
Description: NF19264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19264_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36304953 - 36304727
Alignment:
| Q |
1 |
aatggaacctcttgatctaattgttgtagagccatggatgcctatgaaaatcctgattttgatnnnnnnnntaacaatttgtcttagaaactaccattat |
100 |
Q |
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| T |
36304953 |
aatggaacctcttgatctaattgttgtagagccatggatgcctatgaaaatcctgattttgataaaaaaaataacaatttgtcttagaaactaccattat |
36304854 |
T |
|
| Q |
101 |
ttattgcgnnnnnnnnn----ccaattcttatttttcggctaatccactgtggtaattagggctttgacatcagtaggtgcctcaaggtatcctcagttt |
196 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36304853 |
ttattgcggaaaaaaaaaaaaccaattcttatttttcggctaatccactgtggtaattagggctttgacatcagtaggtgcctcaaggtatcctcagttt |
36304754 |
T |
|
| Q |
197 |
aagtcttttgagcccactaagagtaat |
223 |
Q |
| |
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|||||||||| |||||||||||||||| |
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| T |
36304753 |
aagtcttttgcgcccactaagagtaat |
36304727 |
T |
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