View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19264_low_21 (Length: 312)
Name: NF19264_low_21
Description: NF19264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19264_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 9379873 - 9379572
Alignment:
| Q |
1 |
ttcctccacacatattttcctcctctgtttcattcaagaccaaaagtcccaccattgataatcacaacttgattggcctaataaatcatttgattcaaaa |
100 |
Q |
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| T |
9379873 |
ttcctccacacatattttcctcctctgtttcattcaagaccaaaagtcccaccattgataatcacaacttgattggcctaataaatcatttgattcaaaa |
9379774 |
T |
|
| Q |
101 |
gcactccaatcttctggtgatgttaaagaaccatcagcatgttcagcaaaattcataagaccagtttcatcttctaaaccaaagtattcaacttttatgc |
200 |
Q |
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| T |
9379773 |
gcactccaatcttctggtgatgttaaagaaccatcagcatgttcagcaaaattcataagaccagtttcatcttctaaaccaaagtattcaacctttatgc |
9379674 |
T |
|
| Q |
201 |
ttgtgtcatcatctgatagaacatcaagtacatgttctgatctttccattgaaggacttggtttcacctcagcctcacatttgtttcttcctccattctc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
9379673 |
ttgtgtcatcatctgatagaacatcaagtacatgttctgatctttccattgaaggacttggtttcacctcagcctcacatttgtttcttcctccattttc |
9379574 |
T |
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| Q |
301 |
tg |
302 |
Q |
| |
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|| |
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| T |
9379573 |
tg |
9379572 |
T |
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