View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19265_low_5 (Length: 346)
Name: NF19265_low_5
Description: NF19265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19265_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 22 - 328
Target Start/End: Complemental strand, 16459213 - 16458895
Alignment:
| Q |
22 |
aacataacactaaaatcccccctagtatcataatcagagcatttagagtaaagctcacattgttcacatagcataaggctcacttaatcgtattcgcata |
121 |
Q |
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| T |
16459213 |
aacataacactaaaatcccccctagtatcataatcagagcatttagagtaaagctcacattgttcacatagcataaggctcacttaatcgtattcgcata |
16459114 |
T |
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| Q |
122 |
acactttgacaattacacagttactatggtgcacatgtatgtacacttgacacttctatttaacttcagaaccattctaactttaaacacacgtcaagga |
221 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16459113 |
acactttgacaattacacagttactatgatgcacatgtatgtacacttgacacttctatttaacttcagaaccattctaactttaaacacacgtcaagga |
16459014 |
T |
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| Q |
222 |
acattatcaatt------------gcgaacacattcaagtcatcatctactcgctcaatcgcaaaccatataagtgtcccaccaaagcacacaaggctta |
309 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16459013 |
acattatcaattctcactcaagaggcgaacacattcaagtcatcatctactcgctcaatcgcaaaccatataagtgtcccaccaaagcacacaaggctta |
16458914 |
T |
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| Q |
310 |
catgaaaccaactattggc |
328 |
Q |
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||||||||||||||||||| |
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| T |
16458913 |
catgaaaccaactattggc |
16458895 |
T |
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