View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19266_high_100 (Length: 239)
Name: NF19266_high_100
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_high_100 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 49493778 - 49493995
Alignment:
| Q |
2 |
cttctccacaggaaaatgatggccgatcatcaacttaatggcgctcactatggcccttccatcccaccgacgagaccacaaaggcgacgccacaatgccg |
101 |
Q |
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| T |
49493778 |
cttctccacaggaaaatgatggccgatcatcaacttaatggcgctcactatggcccttccatcccaccgacgagaccacaaaggcgacgccacaatgccg |
49493877 |
T |
|
| Q |
102 |
gctgcggcttctgcagttgcatcttgggctgctttagaagctgttgcggatgcatgttcaactgcattttaagcctaatttgcagaatcatagccacaat |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49493878 |
gctgcggcttctgcagttgcatcttgggctgctttagaagctgttgcggatgcatgttcaactgcattttaagcctaatttgcagaatcatagccacaat |
49493977 |
T |
|
| Q |
202 |
catcatcttggcggcaat |
219 |
Q |
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||||||||||| |||||| |
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| T |
49493978 |
catcatcttggtggcaat |
49493995 |
T |
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