View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19266_high_24 (Length: 433)
Name: NF19266_high_24
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Complemental strand, 8132023 - 8131602
Alignment:
| Q |
1 |
ccattggagcagaagtaagatggatcgctactgagatacagtgcttctactctctttctctctcataattgtcggtatcattgcatatttcaaaaaagaa |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8132023 |
ccattggaacagaagtaagatggatcgctactgagatacagtgcttctactctctctctctctcataattgtcggtatcattgcatatttcaaaaaagaa |
8131924 |
T |
|
| Q |
101 |
ataatgattgttgctgaaataaaataatgtgaagttcacctttttaataggaaatggtccatcatcttgatgaaaaactgtaaacatttggtcccaaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8131923 |
ataatgattgttgctgaaataaaataatgtgaagttcacctttttaataggaaatgctccatcatcttgatgaaaaactgtaaacatttggtcccaaagg |
8131824 |
T |
|
| Q |
201 |
atagtttctttaggaccaaagaacattatcctttggtggtgccaaatacatatgctgtatttgcagtatttaaatgtt--aaatcacacataacatgata |
298 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
8131823 |
atagtttctttaggaccaaagaacattatcctttggtagtgccaaatacatatgctgtatttgcagtatttaaatgttaaaaatcacacataacatgata |
8131724 |
T |
|
| Q |
299 |
cctttgaggaattcctaccgaagcaactaatctgtggtagctaatgatctgaaatctgaatgcatgaagcatatggttatgtttcacaagcatgagaatg |
398 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8131723 |
cctttgaggaattcctaccgatgcaactaatctgtggtagctaatgatctgaaatctgaatgcatgaagcatatggttatgtttcacaagcatgagaatg |
8131624 |
T |
|
| Q |
399 |
cattacatttttatacaaagta |
420 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
8131623 |
cattacatttttatacaaagta |
8131602 |
T |
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