View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19266_high_27 (Length: 419)
Name: NF19266_high_27
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_high_27 |
 |  |
|
| [»] scaffold0197 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 10 - 401
Target Start/End: Original strand, 38821613 - 38822026
Alignment:
| Q |
10 |
attattctataatttatttttgacagagtatgtactctatgtaacaggataacaaatagta---tatgggaaataaagaaataacaaattcaaagatcta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38821613 |
attattctataatttatttttgacagagtatgtactctatgtaacagaataacaaatagtagtatatgggaaataaagaaataacaaattcaaaggtcta |
38821712 |
T |
 |
| Q |
107 |
tcttcaaaatgtaaacaaagtgttaaattgcaacatta-------gtattcagattaaaatattgctacaattagaactgaagattcacacatagagcca |
199 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
38821713 |
tcttcaaaatgtaaacaaagagttaaattgcaacattactgattagtattcagattaaaatagtgctacaattagaactgaagattcacacatagagcaa |
38821812 |
T |
 |
| Q |
200 |
atactactaactatccaatttagggtaacgataataaga------------actaagccctctctcctctgattcttcttgcaagctgaatgtccttagg |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38821813 |
atactactaactatccaatttagggtaacgaaattgaaattctagcaaatgactaagccctctctcctctgattcttcttgcaagctgaatgtccttagg |
38821912 |
T |
 |
| Q |
288 |
catgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcg |
387 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38821913 |
catgattgtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcg |
38822012 |
T |
 |
| Q |
388 |
ctgctttggaatct |
401 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
38822013 |
ctgctctggaatct |
38822026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 229 - 401
Target Start/End: Complemental strand, 38799663 - 38799491
Alignment:
| Q |
229 |
gataataagaactaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttg |
328 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38799663 |
gataataagaactaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgattgtaactctcttagcatgaattgcacaaaggtttg |
38799564 |
T |
 |
| Q |
329 |
tgtcttcaaagagaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttggaatct |
401 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38799563 |
tgtcttcaaagagaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctctggaatct |
38799491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 238 - 358
Target Start/End: Complemental strand, 38807155 - 38807035
Alignment:
| Q |
238 |
aactaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaa |
337 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || | |||||||| |||| |
|
|
| T |
38807155 |
aactaagccctctcgcctctgattcttcttgcaagttgaatgtccttaggcatgatagtaactctcttagcatgaattgcgcacggatttgtgtcctcaa |
38807056 |
T |
 |
| Q |
338 |
agagaccaaccaagtaagctt |
358 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
38807055 |
agagaccaaccaagtaagctt |
38807035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 236 - 398
Target Start/End: Original strand, 43479641 - 43479803
Alignment:
| Q |
236 |
agaactaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttc |
335 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||| || |||||||| || ||||| |
|
|
| T |
43479641 |
agaactaagccctctcgcctctaattcttcttgcaagttgaatatccttaggcataattgtaaccctcttagcatgaatagcgcaaaggttagtatcttc |
43479740 |
T |
 |
| Q |
336 |
aaagagaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttggaa |
398 |
Q |
| |
|
||| | |||||| | ||||||||||| |||||||||||||| ||||| ||||| || ||||| |
|
|
| T |
43479741 |
aaacaaaccaacaagataagcttcagcggcttcttgaagagcagaaacagcgctactctggaa |
43479803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 41944074 - 41944021
Alignment:
| Q |
267 |
tgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcaca |
320 |
Q |
| |
|
|||||| ||||||||||| ||||| || ||||| |||||||||||||||||||| |
|
|
| T |
41944074 |
tgcaagttgaatgtcctttggcataattgtaaccctcttagcatgaattgcaca |
41944021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 26592297 - 26592251
Alignment:
| Q |
268 |
gcaagctgaatgtccttaggcatgatggtaactctcttagcatgaat |
314 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| | |||||||||||| |
|
|
| T |
26592297 |
gcaagctgaatatccttaggcatgatagtaacacgcttagcatgaat |
26592251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 25865829 - 25865777
Alignment:
| Q |
268 |
gcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcaca |
320 |
Q |
| |
|
||||||||||| ||||| ||||| || || || |||||||||||||||||||| |
|
|
| T |
25865829 |
gcaagctgaatatcctttggcataatcgttaccctcttagcatgaattgcaca |
25865777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0197 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 31149 - 31007
Alignment:
| Q |
259 |
attcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagctt |
358 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||| |||||||| | |||||| | ||||||| |
|
|
| T |
31149 |
attcttcttgcaagttgaatatccttaggcataatagtaactctcttagcatgaatagcgcaaagatttgtatcttcaaacaaaccaacaagataagctt |
31050 |
T |
 |
| Q |
359 |
cagcagcttcttgaagagcggaaactgcgctgctttggaatct |
401 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
31049 |
cagcagcttcttgaagagcagaaacagcactgctctggaatct |
31007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 241 - 398
Target Start/End: Complemental strand, 24860702 - 24860545
Alignment:
| Q |
241 |
taagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaaga |
340 |
Q |
| |
|
||||||||||| ||||||||||| | || || ||||| ||||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||| |
|
|
| T |
24860702 |
taagccctctcgcctctgattctgcgagcgagttgaatatccttgggcataatggtaactctcttagcatgaatagcgcaaagatttgtatcttcaaaga |
24860603 |
T |
 |
| Q |
341 |
gaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttggaa |
398 |
Q |
| |
|
| ||||| | |||||||||||||||||||||||||| ||||| ||||| || ||||| |
|
|
| T |
24860602 |
gtccaacgagataagcttcagcagcttcttgaagagcagaaacagcgctactctggaa |
24860545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 371
Target Start/End: Complemental strand, 34748881 - 34748781
Alignment:
| Q |
271 |
agctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagcttctt |
370 |
Q |
| |
|
||||| || |||||||||||||| || || | ||| |||||||| ||||| ||||| || || |||||||||||||| | ||||| ||||| ||||||| |
|
|
| T |
34748881 |
agctggatatccttaggcatgatagtgacacgcttggcatgaatggcacagaggttagtatcctcaaagagaccaacgagataagcctcagccgcttctt |
34748782 |
T |
 |
| Q |
371 |
g |
371 |
Q |
| |
|
| |
|
|
| T |
34748781 |
g |
34748781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 40036156 - 40036062
Alignment:
| Q |
277 |
atgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagcttcttg |
371 |
Q |
| |
|
|||||||| ||||| || ||||||| ||| ||||| || ||||| | ||| ||||| |||||||||||||| | || ||||||||||| ||||| |
|
|
| T |
40036156 |
atgtccttgggcataatagtaactcgcttggcatggatagcacacaagttagtgtcctcaaagagaccaacaagatatgcttcagcagcctcttg |
40036062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 400
Target Start/End: Complemental strand, 12531649 - 12531489
Alignment:
| Q |
240 |
ctaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaag |
339 |
Q |
| |
|
|||||||||||| ||||||||||| | || || ||||| |||||||||||||| ||||| |||||||||||||| ||||| || || || |||||||| |
|
|
| T |
12531649 |
ctaagccctctcgcctctgattctgcgagcgagttgaatatccttaggcatgatagtaaccctcttagcatgaatggcacagagattagtatcttcaaac |
12531550 |
T |
 |
| Q |
340 |
agaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttggaatc |
400 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
12531549 |
aaaccaacaagataagcttcagcagcttcttgaagagcagaaacagcactgctttggaatc |
12531489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 240 - 400
Target Start/End: Original strand, 12546970 - 12547130
Alignment:
| Q |
240 |
ctaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaag |
339 |
Q |
| |
|
|||||| ||||| ||||| ||||| | ||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| || || || |||||||| |
|
|
| T |
12546970 |
ctaagctctctcgcctctaattctgcgagcaagttgaatatccttaggcatgatagtaaccctcttagcatgaatggcacagagattagtatcttcaaac |
12547069 |
T |
 |
| Q |
340 |
agaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttggaatc |
400 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
12547070 |
aaaccaacaagataagcttcagcagcttcttgaagagcagaaacagcactgctttggaatc |
12547130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 383
Target Start/End: Original strand, 9866628 - 9866771
Alignment:
| Q |
240 |
ctaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaag |
339 |
Q |
| |
|
||||||||||| |||||||||||| || || || ||||||| |||||| || |||||||||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
9866628 |
ctaagccctctggcctctgattctttaagcgagttggatgtcctcaggcataatagtaactctcttagcatgaatagcacaaaggttagtatcttcaaac |
9866727 |
T |
 |
| Q |
340 |
agaccaaccaagtaagcttcagcagcttcttgaagagcggaaac |
383 |
Q |
| |
|
| |||||| | || ||| |||||||||||||||||| ||||| |
|
|
| T |
9866728 |
aaaccaacaagatagtctttagcagcttcttgaagagcagaaac |
9866771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 9870098 - 9870003
Alignment:
| Q |
280 |
tccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagcttcttgaaga |
375 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| || ||||| || | |||| ||| | |||||| || ||||||||| |||||||||||||| |
|
|
| T |
9870098 |
tccttaggcataatagtaactctcttagcatgaatagcgcaaagattaatatcttaaaacaaaccaacaaaataagcttcaacagcttcttgaaga |
9870003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 12538712 - 12538675
Alignment:
| Q |
283 |
ttaggcatgatggtaactctcttagcatgaattgcaca |
320 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
12538712 |
ttaggcatgatagtaactctcttagcatgaatagcaca |
12538675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 383
Target Start/End: Original strand, 3929932 - 3930075
Alignment:
| Q |
240 |
ctaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaag |
339 |
Q |
| |
|
||||||||| || |||||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||| || || |||||||| |
|
|
| T |
3929932 |
ctaagccctttcgcctctgattcttcttgcaagttgaatatccttcggcataatagtaactctcttagcatgaatggcacaaagattcgtatcttcaaac |
3930031 |
T |
 |
| Q |
340 |
agaccaaccaagtaagcttcagcagcttcttgaagagcggaaac |
383 |
Q |
| |
|
| |||||| | || ||||||||||||||||||||||| ||||| |
|
|
| T |
3930032 |
aaaccaacaagatacgcttcagcagcttcttgaagagcagaaac |
3930075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 21317712 - 21317570
Alignment:
| Q |
259 |
attcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagctt |
358 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||| ||||| |||||||| | |||||| | ||||||| |
|
|
| T |
21317712 |
attcttcttgcaagttgaatatccttaggcataatagtaactctcttagcatgaatagcgcaaagatttgtatcttcaaacaaaccaacaagataagctt |
21317613 |
T |
 |
| Q |
359 |
cagcagcttcttgaagagcggaaactgcgctgctttggaatct |
401 |
Q |
| |
|
|||| |||||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
21317612 |
cagccgcttcttgaagagcagaaacagcactgctctggaatct |
21317570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 400
Target Start/End: Original strand, 3928596 - 3928740
Alignment:
| Q |
256 |
ctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaag |
355 |
Q |
| |
|
|||||||| | |||||| | ||| |||||||||| || |||||||||||||||||||| |||||||| || | |||||||| | |||||| | | | |
|
|
| T |
3928596 |
ctgattctgcatgcaagtttaatatccttaggcacaatagtaactctcttagcatgaatagcacaaagattcatatcttcaaacaaaccaacaatacacg |
3928695 |
T |
 |
| Q |
356 |
cttcagcagcttcttgaagagcggaaactgcgctgctttggaatc |
400 |
Q |
| |
|
||||||| |||||||||||| ||||| |||||| | ||||||| |
|
|
| T |
3928696 |
cttcagcgatttcttgaagagcagaaacagcgctgatctggaatc |
3928740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 395
Target Start/End: Complemental strand, 13576505 - 13576350
Alignment:
| Q |
240 |
ctaagccctctctcctctgattcttcttgcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaag |
339 |
Q |
| |
|
||||||||| || |||||||||||||| ||||| ||||| ||||||||||| || ||||| |||||||||||||| |||||||| || || || ||||| |
|
|
| T |
13576505 |
ctaagccctttcgcctctgattcttctcgcaagttgaatatccttaggcataatagtaaccctcttagcatgaatagcacaaagattcgtatcctcaaac |
13576406 |
T |
 |
| Q |
340 |
agaccaaccaagtaagcttcagcagcttcttgaagagcggaaactgcgctgctttg |
395 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||||| ||||| || |||||||| |
|
|
| T |
13576405 |
aaaccaacaagataagcttcagcagcttcttgaagagcagaaacagcactgctttg |
13576350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 34562651 - 34562757
Alignment:
| Q |
268 |
gcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagctt |
367 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| | || || || ||||| | ||||||||| || ||||| || |||| |
|
|
| T |
34562651 |
gcaagttgaatatccttaggcataatggtaaccctcttagcatgaattgcacacaaattggtatcctcaaacaaaccaaccaaatatgcttccgctgctt |
34562750 |
T |
 |
| Q |
368 |
cttgaag |
374 |
Q |
| |
|
| ||||| |
|
|
| T |
34562751 |
cctgaag |
34562757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 34571445 - 34571551
Alignment:
| Q |
268 |
gcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagctt |
367 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| | || || || ||||| | ||||||||| || ||||| || |||| |
|
|
| T |
34571445 |
gcaagttgaatatccttaggcataatggtaaccctcttagcatgaattgcacacaaattggtatcctcaaacaaaccaaccaaatatgcttccgctgctt |
34571544 |
T |
 |
| Q |
368 |
cttgaag |
374 |
Q |
| |
|
| ||||| |
|
|
| T |
34571545 |
cctgaag |
34571551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 7594130 - 7594236
Alignment:
| Q |
268 |
gcaagctgaatgtccttaggcatgatggtaactctcttagcatgaattgcacaaaggtttgtgtcttcaaagagaccaaccaagtaagcttcagcagctt |
367 |
Q |
| |
|
||||||||||| ||||| ||||| || || || |||||||||||||||||||| || || ||||| ||||| | ||||||| |||||| ||||| |||| |
|
|
| T |
7594130 |
gcaagctgaatatcctttggcataattgtcaccctcttagcatgaattgcacacagattggtgtcctcaaacaatccaaccaggtaagcctcagctgctt |
7594229 |
T |
 |
| Q |
368 |
cttgaag |
374 |
Q |
| |
|
| ||||| |
|
|
| T |
7594230 |
cctgaag |
7594236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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