View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19266_high_50 (Length: 330)
Name: NF19266_high_50
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 7210003 - 7209708
Alignment:
| Q |
20 |
acactattttgcacactaggactcatagtcaaattaagagattgaaaaccatttccatcactagaagttgttttcccctcagaagaaaactgagtttgag |
119 |
Q |
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| T |
7210003 |
acaccattttgcacacaaggactcatagtcaaattaagagattgaaaaccatttccatcactagaagttgttttcccctcagaagaaaactgagtttgag |
7209904 |
T |
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| Q |
120 |
tcatccaagatttatacatgctattatcatggattaaagcatgatgattgttgttgctgtgatcattatatgcatgaaaagagtgaatcaaagattggtt |
219 |
Q |
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| T |
7209903 |
tcatccaagatttatacatgctattatcatggattaaagcatgatgattgttgttgctgtgatcattatatgcatgaaaagagtgaatcaaagattggtt |
7209804 |
T |
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| Q |
220 |
tgttagattcttccttgtgtcaatctctggattattattggtacaaaaacttggtgacacattaacattaattttagacatagtactagtagtagt |
315 |
Q |
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| T |
7209803 |
tgttagattctcccttgtgtcaatctctggattattattggtacaaaaacttggtgacacattaacattaattttagacatagtactagtagtagt |
7209708 |
T |
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