View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19266_low_112 (Length: 234)

Name: NF19266_low_112
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19266_low_112
NF19266_low_112
[»] chr8 (43 HSPs)
chr8 (72-234)||(38643977-38644139)
chr8 (72-234)||(13307622-13307784)
chr8 (72-234)||(27082867-27083029)
chr8 (74-234)||(465843-466003)
chr8 (110-234)||(11727061-11727185)
chr8 (72-232)||(16446906-16447066)
chr8 (72-234)||(5299975-5300137)
chr8 (72-234)||(34894966-34895128)
chr8 (72-234)||(36694995-36695157)
chr8 (72-234)||(34952060-34952222)
chr8 (72-234)||(6098547-6098709)
chr8 (72-234)||(10555231-10555393)
chr8 (78-234)||(37970548-37970704)
chr8 (72-234)||(1150134-1150296)
chr8 (72-234)||(1204926-1205088)
chr8 (72-234)||(43643624-43643786)
chr8 (72-234)||(12876108-12876270)
chr8 (72-232)||(9864147-9864307)
chr8 (72-232)||(30654614-30654774)
chr8 (72-234)||(40862418-40862580)
chr8 (72-234)||(23854460-23854622)
chr8 (71-221)||(41362516-41362663)
chr8 (72-234)||(16222862-16223024)
chr8 (110-234)||(41911017-41911142)
chr8 (73-234)||(31933915-31934076)
chr8 (124-234)||(39099148-39099256)
chr8 (171-227)||(33197947-33198003)
chr8 (143-234)||(1149661-1149752)
chr8 (74-234)||(7890986-7891137)
chr8 (72-234)||(33906223-33906373)
chr8 (110-234)||(44869533-44869658)
chr8 (110-234)||(43025739-43025863)
chr8 (110-232)||(8803848-8803963)
chr8 (72-136)||(15009241-15009305)
chr8 (180-234)||(7998401-7998455)
chr8 (176-234)||(35459740-35459798)
chr8 (198-234)||(4132714-4132750)
chr8 (72-157)||(24823378-24823463)
chr8 (72-102)||(7998362-7998392)
chr8 (72-102)||(39099270-39099300)
chr8 (73-102)||(35459859-35459888)
chr8 (167-234)||(1954018-1954086)
chr8 (72-100)||(33197891-33197919)
[»] chr7 (48 HSPs)
chr7 (25-234)||(33688286-33688487)
chr7 (72-232)||(5657507-5657667)
chr7 (72-234)||(21991611-21991773)
chr7 (110-234)||(26980336-26980460)
chr7 (72-232)||(15612785-15612944)
chr7 (86-234)||(22687228-22687376)
chr7 (72-234)||(8861260-8861422)
chr7 (72-234)||(6546494-6546656)
chr7 (72-234)||(12165727-12165889)
chr7 (74-234)||(27421404-27421563)
chr7 (72-232)||(32821079-32821239)
chr7 (72-234)||(12390654-12390816)
chr7 (72-234)||(43686016-43686177)
chr7 (72-221)||(26524364-26524513)
chr7 (110-234)||(29173553-29173677)
chr7 (73-234)||(48928588-48928748)
chr7 (73-232)||(24211717-24211876)
chr7 (72-234)||(4582894-4583056)
chr7 (72-232)||(32432432-32432587)
chr7 (72-234)||(18797304-18797464)
chr7 (72-234)||(30055501-30055664)
chr7 (72-234)||(31579088-31579255)
chr7 (72-234)||(31520748-31520909)
chr7 (72-234)||(41765102-41765264)
chr7 (74-234)||(23111167-23111327)
chr7 (72-232)||(37109847-37110007)
chr7 (112-234)||(44413403-44413525)
chr7 (72-234)||(37346997-37347159)
chr7 (88-234)||(48928321-48928466)
chr7 (74-234)||(25691568-25691729)
chr7 (72-232)||(17842612-17842772)
chr7 (71-234)||(7334768-7334931)
chr7 (72-234)||(27283719-27283881)
chr7 (73-234)||(38258521-38258682)
chr7 (72-231)||(10359242-10359400)
chr7 (72-234)||(9355850-9356012)
chr7 (72-202)||(34362205-34362334)
chr7 (112-234)||(10481619-10481742)
chr7 (74-234)||(11071182-11071343)
chr7 (119-215)||(32593232-32593327)
chr7 (110-221)||(35353121-35353233)
chr7 (167-234)||(44598736-44598803)
chr7 (111-234)||(43925120-43925238)
chr7 (189-234)||(15672786-15672831)
chr7 (158-202)||(37703546-37703590)
chr7 (181-232)||(37704241-37704292)
chr7 (110-203)||(38053499-38053592)
chr7 (111-163)||(44598378-44598430)
[»] chr5 (54 HSPs)
chr5 (72-234)||(8741899-8742062)
chr5 (74-234)||(5837557-5837717)
chr5 (72-230)||(19119859-19120017)
chr5 (72-234)||(1429158-1429320)
chr5 (72-234)||(30969337-30969499)
chr5 (73-234)||(32563150-32563311)
chr5 (72-232)||(8466745-8466904)
chr5 (72-232)||(15724490-15724648)
chr5 (72-234)||(5112326-5112488)
chr5 (72-234)||(7693230-7693392)
chr5 (73-234)||(28416540-28416696)
chr5 (74-233)||(26268076-26268235)
chr5 (72-234)||(27330306-27330466)
chr5 (72-234)||(9200233-9200395)
chr5 (72-234)||(22019632-22019794)
chr5 (72-234)||(23116235-23116397)
chr5 (74-232)||(25500941-25501099)
chr5 (72-234)||(36866762-36866924)
chr5 (72-234)||(40133385-40133547)
chr5 (72-234)||(35933902-35934057)
chr5 (72-234)||(14409340-14409501)
chr5 (110-227)||(25668688-25668804)
chr5 (72-234)||(35511490-35511652)
chr5 (72-234)||(39572819-39572981)
chr5 (72-234)||(36860423-36860585)
chr5 (72-234)||(38528250-38528411)
chr5 (74-234)||(699152-699312)
chr5 (142-234)||(23954802-23954895)
chr5 (129-234)||(6824492-6824599)
chr5 (110-234)||(24886142-24886266)
chr5 (112-234)||(14919541-14919663)
chr5 (110-234)||(22255219-22255344)
chr5 (84-234)||(33908245-33908395)
chr5 (73-234)||(22980794-22980955)
chr5 (74-234)||(27318500-27318660)
chr5 (72-234)||(12910350-12910517)
chr5 (72-234)||(31786659-31786821)
chr5 (73-234)||(31705625-31705785)
chr5 (151-234)||(15992553-15992636)
chr5 (133-234)||(21088779-21088880)
chr5 (72-234)||(22974095-22974257)
chr5 (114-234)||(42342775-42342893)
chr5 (72-208)||(35826522-35826658)
chr5 (110-234)||(7208877-7209000)
chr5 (114-234)||(43308665-43308784)
chr5 (111-230)||(17158048-17158166)
chr5 (143-232)||(35504436-35504525)
chr5 (114-209)||(11898044-11898139)
chr5 (72-164)||(13956428-13956520)
chr5 (76-187)||(8436970-8437081)
chr5 (72-149)||(16004474-16004552)
chr5 (72-157)||(26317774-26317859)
chr5 (72-205)||(5829897-5830034)
chr5 (112-156)||(22255615-22255659)
[»] chr6 (17 HSPs)
chr6 (72-234)||(8513233-8513395)
chr6 (72-234)||(4318845-4319007)
chr6 (74-234)||(29182165-29182325)
chr6 (74-234)||(30353380-30353540)
chr6 (74-224)||(6088910-6089060)
chr6 (111-234)||(15491654-15491777)
chr6 (72-230)||(3879965-3880123)
chr6 (72-234)||(7235057-7235218)
chr6 (72-234)||(33893025-33893186)
chr6 (72-232)||(1945833-1945994)
chr6 (110-234)||(21017134-21017258)
chr6 (73-221)||(20768087-20768233)
chr6 (72-203)||(18498433-18498565)
chr6 (72-232)||(5627391-5627551)
chr6 (72-232)||(7055239-7055399)
chr6 (72-234)||(33618834-33618996)
chr6 (75-234)||(6091205-6091363)
[»] chr4 (54 HSPs)
chr4 (74-234)||(34948146-34948306)
chr4 (114-234)||(23761114-23761234)
chr4 (73-232)||(4597994-4598152)
chr4 (72-234)||(49375966-49376129)
chr4 (72-234)||(29584249-29584409)
chr4 (72-234)||(25701106-25701268)
chr4 (74-232)||(27396618-27396776)
chr4 (110-234)||(54499287-54499412)
chr4 (70-234)||(19089502-19089666)
chr4 (72-234)||(55241154-55241315)
chr4 (74-234)||(17167715-17167875)
chr4 (74-234)||(17173292-17173452)
chr4 (74-234)||(36493737-36493897)
chr4 (72-232)||(38011854-38012014)
chr4 (72-234)||(55477940-55478106)
chr4 (72-202)||(7703517-7703647)
chr4 (72-234)||(25184113-25184275)
chr4 (72-234)||(28003035-28003197)
chr4 (72-234)||(35021084-35021246)
chr4 (73-234)||(37775670-37775829)
chr4 (112-232)||(32592133-32592253)
chr4 (74-232)||(33341397-33341558)
chr4 (72-205)||(39397918-39398051)
chr4 (72-234)||(19440697-19440860)
chr4 (72-234)||(37663790-37663950)
chr4 (126-234)||(50764784-50764892)
chr4 (74-234)||(33816582-33816742)
chr4 (72-184)||(37287733-37287846)
chr4 (74-202)||(47253751-47253878)
chr4 (72-234)||(9139247-9139407)
chr4 (72-202)||(30002705-30002835)
chr4 (72-232)||(34361543-34361702)
chr4 (112-234)||(46888206-46888328)
chr4 (72-234)||(879597-879759)
chr4 (72-232)||(42199729-42199889)
chr4 (72-232)||(32912631-32912791)
chr4 (74-234)||(5048014-5048174)
chr4 (133-234)||(4934251-4934353)
chr4 (72-218)||(32579444-32579592)
chr4 (72-202)||(35025669-35025799)
chr4 (75-232)||(6864038-6864195)
chr4 (72-154)||(7152235-7152317)
chr4 (72-164)||(4205116-4205208)
chr4 (72-232)||(50697242-50697401)
chr4 (113-193)||(23518393-23518473)
chr4 (72-138)||(17272011-17272077)
chr4 (172-234)||(17272068-17272126)
chr4 (72-165)||(4396326-4396419)
chr4 (180-226)||(1815409-1815455)
chr4 (194-232)||(3042741-3042779)
chr4 (72-102)||(38811813-38811843)
chr4 (72-102)||(38812278-38812308)
chr4 (74-102)||(20097509-20097537)
chr4 (72-157)||(53124287-53124372)
[»] chr1 (51 HSPs)
chr1 (83-234)||(47279196-47279347)
chr1 (72-234)||(3309144-3309305)
chr1 (111-234)||(48620672-48620795)
chr1 (72-234)||(38823210-38823372)
chr1 (74-234)||(15752027-15752187)
chr1 (72-234)||(34012395-34012557)
chr1 (72-234)||(11742369-11742530)
chr1 (110-233)||(27532999-27533122)
chr1 (72-234)||(16415641-16415804)
chr1 (72-234)||(2959744-2959906)
chr1 (111-234)||(3534967-3535090)
chr1 (112-234)||(9903072-9903194)
chr1 (59-234)||(10182026-10182201)
chr1 (72-234)||(27267217-27267376)
chr1 (72-202)||(1547283-1547413)
chr1 (72-234)||(42721035-42721197)
chr1 (73-234)||(14758038-14758199)
chr1 (74-234)||(41926161-41926321)
chr1 (72-234)||(7079081-7079254)
chr1 (72-234)||(18422647-18422809)
chr1 (72-234)||(31621571-31621733)
chr1 (72-234)||(39393379-39393541)
chr1 (73-234)||(10922724-10922885)
chr1 (110-234)||(40884847-40884971)
chr1 (72-232)||(19899789-19899949)
chr1 (112-234)||(28564799-28564921)
chr1 (72-234)||(15382929-15383091)
chr1 (72-234)||(32267030-32267192)
chr1 (72-234)||(15168085-15168254)
chr1 (72-220)||(21289661-21289816)
chr1 (111-234)||(27563923-27564046)
chr1 (110-233)||(32216089-32216212)
chr1 (74-234)||(33725618-33725778)
chr1 (72-234)||(30254420-30254581)
chr1 (72-234)||(30326970-30327132)
chr1 (111-232)||(51128894-51129015)
chr1 (110-234)||(238531-238654)
chr1 (119-234)||(4330323-4330439)
chr1 (150-234)||(27227503-27227587)
chr1 (72-231)||(47682515-47682673)
chr1 (72-234)||(8222127-8222286)
chr1 (111-234)||(28769688-28769810)
chr1 (72-234)||(37618910-37619076)
chr1 (111-232)||(46931446-46931567)
chr1 (72-232)||(23999343-23999503)
chr1 (114-234)||(37451324-37451443)
chr1 (111-234)||(27763329-27763451)
chr1 (169-234)||(25160725-25160790)
chr1 (172-234)||(22170807-22170869)
chr1 (72-102)||(27227627-27227657)
chr1 (72-102)||(43579242-43579272)
[»] chr3 (55 HSPs)
chr3 (72-234)||(11466815-11466977)
chr3 (72-234)||(35844317-35844479)
chr3 (72-234)||(22450959-22451121)
chr3 (72-234)||(44186524-44186686)
chr3 (72-224)||(4015451-4015603)
chr3 (72-234)||(37203058-37203220)
chr3 (72-234)||(52040945-52041108)
chr3 (72-234)||(21193597-21193759)
chr3 (72-232)||(7327507-7327668)
chr3 (82-232)||(29099356-29099506)
chr3 (112-234)||(2007964-2008086)
chr3 (72-232)||(45174494-45174656)
chr3 (72-234)||(26941283-26941445)
chr3 (72-234)||(37157699-37157860)
chr3 (72-232)||(51213006-51213166)
chr3 (85-232)||(40935995-40936142)
chr3 (74-233)||(46297786-46297945)
chr3 (72-230)||(48354932-48355090)
chr3 (87-234)||(11357387-11357535)
chr3 (72-232)||(40552284-40552444)
chr3 (72-234)||(3655225-3655387)
chr3 (72-234)||(20373319-20373481)
chr3 (72-232)||(34132926-34133086)
chr3 (72-232)||(47481513-47481673)
chr3 (72-234)||(27480402-27480564)
chr3 (72-234)||(39282644-39282805)
chr3 (118-234)||(42506098-42506214)
chr3 (142-234)||(43348319-43348410)
chr3 (110-234)||(44891535-44891650)
chr3 (75-234)||(32373466-32373623)
chr3 (110-234)||(22446087-22446211)
chr3 (110-234)||(53229175-53229300)
chr3 (131-234)||(14586693-14586796)
chr3 (111-234)||(24488985-24489108)
chr3 (112-234)||(53176086-53176207)
chr3 (110-234)||(4761672-4761796)
chr3 (126-229)||(24708145-24708246)
chr3 (73-234)||(25579731-25579892)
chr3 (111-234)||(33378808-33378931)
chr3 (110-228)||(3362282-3362400)
chr3 (111-232)||(21009827-21009948)
chr3 (72-156)||(33698183-33698263)
chr3 (74-234)||(43975911-43976068)
chr3 (175-234)||(29163912-29163971)
chr3 (193-234)||(33698265-33698306)
chr3 (73-234)||(11835651-11835790)
chr3 (112-232)||(54505839-54505958)
chr3 (114-234)||(54828724-54828843)
chr3 (112-158)||(2613921-2613967)
chr3 (172-234)||(46994684-46994746)
chr3 (169-234)||(38591786-38591851)
chr3 (72-102)||(40640652-40640682)
chr3 (158-221)||(53811698-53811767)
chr3 (73-102)||(43348281-43348310)
chr3 (190-234)||(36012246-36012290)
[»] chr2 (41 HSPs)
chr2 (72-234)||(19424669-19424831)
chr2 (74-234)||(36641988-36642148)
chr2 (72-234)||(4264118-4264280)
chr2 (73-234)||(13711465-13711626)
chr2 (74-232)||(43770882-43771039)
chr2 (72-234)||(4478368-4478531)
chr2 (72-234)||(33551027-33551189)
chr2 (72-233)||(19313852-19314012)
chr2 (74-225)||(41463900-41464051)
chr2 (72-234)||(4166922-4167084)
chr2 (72-234)||(31570775-31570937)
chr2 (74-234)||(33660409-33660569)
chr2 (110-234)||(27349980-27350103)
chr2 (72-234)||(29242179-29242341)
chr2 (110-234)||(33709273-33709397)
chr2 (110-234)||(43648286-43648410)
chr2 (132-234)||(5881599-5881701)
chr2 (110-234)||(37905746-37905870)
chr2 (74-234)||(44285951-44286111)
chr2 (72-234)||(17071778-17071940)
chr2 (72-230)||(39167408-39167566)
chr2 (72-234)||(4763628-4763793)
chr2 (72-234)||(26357577-26357739)
chr2 (74-234)||(3176941-3177101)
chr2 (72-232)||(11366424-11366584)
chr2 (72-234)||(17054137-17054299)
chr2 (72-234)||(18494321-18494471)
chr2 (72-203)||(2325442-2325573)
chr2 (142-234)||(7006962-7007054)
chr2 (65-221)||(33902061-33902215)
chr2 (72-234)||(44913662-44913825)
chr2 (112-234)||(19289364-19289486)
chr2 (124-217)||(41051263-41051357)
chr2 (172-234)||(41960940-41961002)
chr2 (172-234)||(45327820-45327882)
chr2 (72-154)||(41465509-41465591)
chr2 (173-234)||(31861953-31862014)
chr2 (175-219)||(19501795-19501839)
chr2 (72-102)||(7007063-7007093)
chr2 (72-102)||(43446480-43446510)
chr2 (72-185)||(35958909-35959022)
[»] scaffold0291 (1 HSPs)
scaffold0291 (74-234)||(7889-8049)
[»] scaffold0002 (3 HSPs)
scaffold0002 (112-232)||(94408-94528)
scaffold0002 (72-234)||(134-296)
scaffold0002 (126-234)||(408452-408559)
[»] scaffold0318 (1 HSPs)
scaffold0318 (69-234)||(11903-12071)
[»] scaffold0022 (1 HSPs)
scaffold0022 (74-232)||(146041-146199)
[»] scaffold0009 (2 HSPs)
scaffold0009 (72-163)||(42348-42439)
scaffold0009 (72-136)||(100821-100885)
[»] scaffold0061 (1 HSPs)
scaffold0061 (74-232)||(43959-44117)
[»] scaffold0017 (1 HSPs)
scaffold0017 (74-232)||(154670-154828)
[»] scaffold0008 (1 HSPs)
scaffold0008 (124-234)||(267335-267446)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 38643977 - 38644139
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||| ||||||||||||       ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 38644076  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38644077 catcaaaagttcagtctccatagtatcatcaattcatcagattaacaagaatacacttaatct 38644139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 13307622 - 13307784
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||  ||||     
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtga 13307721  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||||||    
T  13307722 catcaaaagttcagtccccatagtattatcaattcatcagattagcaagaatacacttaatct 13307784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 27083029 - 27082867
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| ||| |||       ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||  |||||    
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtgg 27082930  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  27082929 cattaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagactacacttaatct 27082867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 465843 - 466003
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| |||||||||||||| | |||||       |||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  465943 tcaaaaattcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatct 466003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 11727061 - 11727185
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||    
T  11727061 ggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcagtcctcataatatcatcaattcatc 11727160  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| |||||||    
T  11727161 aaattaacaagaatacatttaatct 11727185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 16447066 - 16446906
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       | | ||||||||| ||||||||||||| ||| ||||||||||||||||||||||| || |||    
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatgg 16446967  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||| |||| ||||| |||||||||||||||| |||||||||| ||||||||||    
T  16446966 catcaaaagtttagtccccatactatcatcaattcatcagattaacaagactacacttaat 16446906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 5300137 - 5299975
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||         ||||||||||| |||| ||||||||||||||| |||| ||| | |||||||||  |||||    
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtgg 5300038  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||    
T  5300037 catcaaaagttcagtccttatagtatcatcaattcatcagattaacaagaatacacttaatct 5299975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 34894966 - 34895128
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       | ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||||  |||||    
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34895065  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||    
T  34895066 catcaaaagttcagtcatcatactatcatcaattcatcagattaacaagactacacttaatct 34895128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 36695157 - 36694995
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       | ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  | ||     
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 36695058  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  36695057 catcaaaagttcagtccccatagtatcatcaattcatcagactaagaagaatacacttaatct 36694995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 34952222 - 34952060
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||| || ||||||| | |||||       ||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||  ||||     
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtga 34952123  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||    
T  34952122 catcaaaagttcagtccctttagtatcatcaattcatcaaattaataagaatacacttaatct 34952060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 6098709 - 6098547
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| ||| |       ||||||||||| | |||| |||||||| | | |||||||||||||||||||||||  ||||     
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacagtga 6098610  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||||||| |||| |||||||    
T  6098609 catcaaaagttcagtccccatagtatcgtcaattcatcagattaacaagactacatttaatct 6098547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 10555393 - 10555231
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||| |||||||| |||| |||  |||||||||| |||||||||||  | ||     
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatga 10555294  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| ||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  10555293 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactacacttaatct 10555231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 37970704 - 37970548
Alignment:
Q  78 ttctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaa 177  Q
    |||||||||||||||||||||||||       ||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||  | || ||||||    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaa 37970605  T
Q  178 aagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||| |  |||||||||||||||||||   |||||||||| ||||||||||||    
T  37970604 aagttcagccctcatagtatcatcaattcatatgattaacaagactacacttaatct 37970548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 1150296 - 1150134
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||  ||||||||||||| |||  ||||||||| ||||||||||||  |  |     
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacga 1150197  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||||||||||| |||||| |||||||||| ||||||||||||    
T  1150196 catcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatct 1150134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 1204926 - 1205088
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| || |||||||||||||||||||       ||||||||||||| |||||||| |||| ||| |||||||||||  ||||||||||  | ||     
T  1204926 ggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaatga 1205025  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  1205026 catcaaaagttcagtcctcatagtatcatcagttcatcatattaacaagattacacttaatct 1205088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 43643786 - 43643624
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||| |||  |||||||||| | |||||||||  | ||     
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 43643687  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| |||||||| ||| |||||||||||||| |||||| |||||||||| ||||||| ||||    
T  43643686 catccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatct 43643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 12876108 - 12876270
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||| |||||| || |||||       | ||||||||||| ||||| || |||| ||||||||||||||||| |||||||||  | ||     
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatga 12876207  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||| ||| |||||||||||||    
T  12876208 catcaaaagttcagtcctcatagtatcatcaattcatcagattaagaaggatacacttaatct 12876270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 9864147 - 9864307
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||  |||||||| || |||||       |||||| |||||| ||||  ||||||| |||||||||||||||||||||||||||  | ||     
T  9864147 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 9864246  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||||| ||||| |||||||||||||||| | ||| |||||||||||||||    
T  9864247 catcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaat 9864307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 30654774 - 30654614
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| ||| |||       ||||||||||||| |||||||| |||| |||  ||||||||||||||||||||||  | ||     
T  30654774 ggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatga 30654675  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| || ||||||||||||| |||||||  ||||||||| ||||||||||    
T  30654674 catcaaaagttcagccttcatagtatcatcacttcatcaggttaacaagactacacttaat 30654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 40862418 - 40862580
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaag-tgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||| ||||||||| || ||| |       ||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||  | ||    
T  40862418 ggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaatg 40862517  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||| ||| ||||||||||||  ||| | |||||| ||||||||||||||    
T  40862518 gcatcaaaagttcagtct-catggtatcatcaatttttcatactaacaaaaatacacttaatct 40862580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 23854622 - 23854460
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||| |||| |||||||||||||||||||       ||||||||||||| |||||||| |||| |||  |||||||||||| |||||||||  | ||     
T  23854622 ggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatga 23854523  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||||||||||| |||| | |||||||| | |||| |||||||    
T  23854522 catcaaaagttcagtcctcatagtatcatcaactcattagattaacaatactacaattaatct 23854460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 41362516 - 41362663
Alignment:
Q  71 gggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    ||||||||||||||||||||| |||| |||||       ||||||||||||| ||   ||| |||| ||| ||||||||||||||||| ||||| |||||    
T  41362516 gggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactag--cataaaaa-tgtagtgagtaacaccccactatttgtatagtg 41362612  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaaga 221  Q
     |||||||||||||| |  ||||||||||||||||||||| ||||||||||    
T  41362613 acatcaaaagttcagacctcatagtatcatcaattcatcagattaacaaga 41362663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 16222862 - 16223024
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||| ||||||||||||       |||||| |||||| |||||||| |||| | | |||||||   |||||| ||||||  | ||     
T  16222862 ggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaatga 16222961  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||  |||||||||| ||||||||||||    
T  16222962 catcaaaagttcagtcctcatagtatcatcaattcatccgattaacaagactacacttaatct 16223024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 41911142 - 41911017
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcat 208  Q
    ||||||||||| | |||| |||||||||||| |||||||||||||| ||| ||     ||| ||||||||| |||||||  |||||||||||||||||||    
T  41911142 ggtgaagttaatactatatcatcaaaagtgtcgtgagtaacacccccactattataacagtagcatcaaaaattcagtcaacatagtatcatcaattcat 41911043  T
Q  209 caaattaacaagaatacacttaatct 234  Q
    || ||||||||||||||| |||||||    
T  41911042 cagattaacaagaatacatttaatct 41911017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 31934076 - 31933915
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||||||  ||||||| ||||||||||       ||||||||||||| ||| | ||||||| | |  |||||||||||||||| ||| |  | || |    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgac 31933977  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   |||||||||||||||||||  |||||||||| ||||||||||||    
T  31933976 atcaaaagttcagtcattatagtatcatcaattcatccgattaacaagactacacttaatct 31933915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 39099256 - 39099148
Alignment:
Q  124 tataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaat 223  Q
    |||||||||||||||  ||  |||||||||||||| |||||  | | |||||||||||||||||  ||||||||| ||||||||||| |||||||| |||    
T  39099256 tataacatcaaaagt--tgcaagtaacaccccactctttgtacactagcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaaaaat 39099159  T
Q  224 acacttaatct 234  Q
    |||||||||||    
T  39099158 acacttaatct 39099148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 33197947 - 33198003
Alignment:
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacac 227  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  33197947 gcatcaaaagttcagtctccataatatcatcaattcatcagattaacaagaatacac 33198003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 1149752 - 1149661
Alignment:
Q  143 tgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||| ||||||||||||  | || |||||||||||| |||  |||||||||||||| |||||| |||||||||| ||||||||||||    
T  1149752 tgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtatcatcaactcatcagattaacaagactacacttaatct 1149661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 7891137 - 7890986
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||        |||||||||||| ||||||||||||| |         ||||| |||| ||||||  | |||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaat---------aacactccaccgtttgtacaatggca 7891047  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| |||  |||| |||||||||||||||| |||||||||| |||||| |||||    
T  7891046 tcaaaagttcggtcctcataatatcatcaattcatcagattaacaagactacactcaatct 7890986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 33906223 - 33906373
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||| | ||||||||||       |||||||| |||| ||||  || |||||||| ||||||| ||||||||||||| |           
T  33906223 ggaaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacactatagtattaaaagtgtagtgagtagcaccccactgtttat------- 33906315  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
         |||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||    
T  33906316 -----aaagttcagtcttcatagtatcatcaattcatcagattaacaagactgcacttaatct 33906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 44869533 - 44869658
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgtt--gtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattca 207  Q
    ||||||||||||| |||||||| |||||| ||  |||||| |  ||||||||||||   | || ||||||||||||| ||  |||||||||||||||| |    
T  44869533 ggtgaagttaacactataacattaaaagtattttgtgagtgat-ccccactgtttgcacaatgacatcaaaagttcaatcgtcatagtatcatcaattta 44869631  T
Q  208 tcaaattaacaagaatacacttaatct 234  Q
    ||| |||||||| ||||||||||||||    
T  44869632 tcagattaacaataatacacttaatct 44869658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 43025739 - 43025863
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||  ||||  |||||||||||||||| ||| |||||||| |||||  | ||| || |||||||||||    ||| |||||||||||||||    
T  43025739 ggtgaagttaacgatatagtatcaaaagtgttgtgattaataccccactctttgtacaatggtattaaaagttcagttcatataatatcatcaattcatc 43025838  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | | ||| ||||||||| |||||||    
T  43025839 agactaagaagaatacatttaatct 43025863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 8803963 - 8803848
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| ||||||||||||| |||  |||||||||| ||||| |||||  | || |||||||||||||| |       ||||||||||| |||    
T  8803963 ggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatgacatcaaaagttcagcc-------tatcatcaatttatc 8803871  T
Q  210 aaattaacaagaatacacttaat 232  Q
    |  ||||||||| ||||||||||    
T  8803870 aggttaacaagactacacttaat 8803848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 15009241 - 15009305
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaa 136  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||| |||||||||||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaa 15009305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 7998401 - 7998455
Alignment:
Q  180 gttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| ||| ||||| |||||||||| ||||| |||||||||||||||||||||||    
T  7998401 gttcggtccccataatatcatcaatacatcagattaacaagaatacacttaatct 7998455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 35459798 - 35459740
Alignment:
Q  176 aaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||  |||| ||||||||| |||||| |||||||||| ||||||||||||    
T  35459798 aaaagttcagtcctcataatatcatcaactcatcagattaacaagactacacttaatct 35459740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 4132750 - 4132714
Alignment:
Q  198 catcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4132750 catcaattcatcaaattaacaagactacacttaatct 4132714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 24823463 - 24823378
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccac 157  Q
    ||||||| ||||||| |||| ||||||||||       ||||||||||||| ||||| ||||||||||||  | ||||||||||||    
T  24823463 ggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataatatcaaaagtgttaagtgtaacaccccac 24823378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 7998362 - 7998392
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  7998362 ggaaaattctatggtgaagtcatgagaatga 7998392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 39099300 - 39099270
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  39099300 ggaaaattctatggtgaagtcatgagaatga 39099270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 102
Target Start/End: Complemental strand, 35459888 - 35459859
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatga 102  Q
    ||||||||||||||||||||||||||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatga 35459859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 1954086 - 1954018
Alignment:
Q  167 agtggcatcaaaagttcagtctccatagtatc-atcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||| | || |||||| |||||    
T  1954086 agtggcatcaaaagttcagccctcatagtatctatcaattcatcagattaatatgactacactaaatct 1954018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 33197891 - 33197919
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaat 100  Q
    |||||||||||||||||||||||||||||    
T  33197891 ggaaaattctatggtgaagtcatgagaat 33197919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 33688487 - 33688286
Alignment:
Q  25 ttggaataacgggatctcaataatgtagaatttaaagaagaaagaagggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacatt 124  Q
    |||||||||| ||||||||||||||||||||||||||||||       ||||||| ||||||||||| ||||||||||       ||| ||||||||| |    
T  33688487 ttggaataaccggatctcaataatgtagaatttaaagaaga-------gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaacact 33688396  T
Q  125 ataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaata 224  Q
    ||||||||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  33688395 ataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggcatcaaaagttcagtctctatagtatcatcaattcatcagattaacaagaata 33688296  T
Q  225 cacttaatct 234  Q
    ||||||||||    
T  33688295 cacttaatct 33688286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 5657667 - 5657507
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||    
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 5657568  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  5657567 catcaaaagttcagtcttcatagtatcatcaattcatcatattaacaaaaatacacttaat 5657507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 21991611 - 21991773
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||  ||||     
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtgt 21991710  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  21991711 catcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatct 21991773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 26980336 - 26980460
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||| |||||||||||||||    
T  26980336 ggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtccccataatatcatcaattcatc 26980435  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||||||    
T  26980436 aaattaacaagaatacacttaatct 26980460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 15612944 - 15612785
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||||||| |        |||||||||||| |||||||||||| ||||| |||||||||||||| |||||||  |||||    
T  15612944 ggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacatcaaa-gtgttatgagtaacaccccagtgtttgtagagtgg 15612846  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||    
T  15612845 catcaaaagttcagtccctataatatcatcaattcatcagattaacaagaatacacttaat 15612785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 22687228 - 22687376
Alignment:
Q  86 tgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcag 185  Q
    |||||||||||||||||       | ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcag 22687327  T
Q  186 tctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    || |||||||||||||||||||||| |||||||| ||||||||||||||    
T  22687328 tccccatagtatcatcaattcatcagattaacaataatacacttaatct 22687376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 8861260 - 8861422
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||        | |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||  |||||    
T  8861260 ggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacagtgg 8861359  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||| ||||||||||||||||| |||| |||||||| |||||| |||||||    
T  8861360 catcaaaagttaagtccccatagtatcatcaattaatcagattaacaacaatacatttaatct 8861422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 6546494 - 6546656
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||        |||||||||||| |||| |||||||||||||| ||||||||||||||| |||||  |||      
T  6546494 ggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaa 6546593  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| | | ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  6546594 catcaaaagtttactatccatagtatcatcaattcatcagattaacaagaatacatttaatct 6546656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 12165727 - 12165889
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| ||||||||| | | |||||       ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||  |||||    
T  12165727 ggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtgg 12165826  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||| |   |||||||||||||||||| |||||||||||||||||||||||    
T  12165827 catcaaaagttaagtcccttaagtatcatcaattcatcagattaacaagaatacacttaatct 12165889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 27421563 - 27421404
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||| ||| |||||       ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||  | || ||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||| | ||| |||||| |||| |||| |||||||||||||||||||||||    
T  27421463 tcaaaagttcagtc-ctataatatcataaatttatcagattaacaagaatacacttaatct 27421404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 32821239 - 32821079
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       ||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||  | |||    
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatgg 32821140  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||  | ||||||||||||||||| | |||||||||| |||| |||||    
T  32821139 catcaaaagttcagtcctcgtagtatcatcaattcattagattaacaagactacagttaat 32821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 12390816 - 12390654
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||  ||       ||||||||||||| |||||||||||||||||  ||||||||| ||||||||||||  ||||     
T  12390816 ggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcagtga 12390717  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||  ||| ||||||||| |||||||||||| |||||||||| ||||||||||||    
T  12390716 catcaaaagttatgtccccatagtattatcaattcatcagattaacaagactacacttaatct 12390654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 43686016 - 43686177
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||  | |||    
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacaccc-actgtttgtacaatgg 43686114  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| | ||||||||| |||||||||| | ||||||||||||| |||||||    
T  43686115 catcaaaagttcagtccctatagtatcaacaattcatcagactaacaagaatacatttaatct 43686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 26524513 - 26524364
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||| ||||||| ||||||||||||| |||||||| |||||| ||| |||||||  |||||    
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagtgg 26524414  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaaga 221  Q
    |||||||||| |||||  |||||||||||||||| |||| ||||||||||    
T  26524413 catcaaaagtccagtcctcatagtatcatcaatttatcatattaacaaga 26524364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 29173553 - 29173677
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| | ||  ||||||||||||||||||||||| |||||||||||  | || ||||||||||||||||  ||||||||||||||||||||    
T  29173553 ggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatc 29173652  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    ||| |||||||||||||||||||||    
T  29173653 aaactaacaagaatacacttaatct 29173677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 48928748 - 48928588
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| ||||||||||||||||||||||       |||||||| |||| ||||||||||||||||| ||||||| ||||||||| |||||   ||| |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||| | ||||||||||    
T  48928648 atcaaaagttcagtc-ccatagtattatcaattcatcagattaacaagattgcacttaatct 48928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 232
Target Start/End: Original strand, 24211717 - 24211876
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||||||||||||||| |||||||       ||||||||||||| ||||||||||||| |||  |||||||||||| ||||||| |  | ||||    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||| |  |||||||||||||||||||||  ||||||||| ||||||||||    
T  24211817 atcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaat 24211876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 4582894 - 4583056
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||| | ||||  ||||||| ||||||||||||||||||||| |||||  | ||     
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatga 4582993  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||| |||||||    
T  4582994 catcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatct 4583056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 32432432 - 32432587
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||| |||     ||||| ||||||||||||||||||| |||||||  | ||     
T  32432432 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactat-----caaaaatgttgtgagtaacaccccattgtttgtacaatga 32432526  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  32432527 catcaaaagttcagtctccatagtatcatcaattcatcagactaacaagaatacagttaat 32432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 18797304 - 18797464
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||  |||| |||| |||  ||||||||||||||||||||||  | ||     
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacacta--acataaaaaatgtaatgagtaacaccccactgtttgtacaatga 18797401  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| ||  |||||||||||||| |||||| |||||||||| ||||||||||||    
T  18797402 catcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatct 18797464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 30055501 - 30055664
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnngg-tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    ||||||||||||||||||||||| |||||||        | ||||||||||| ||||| ||||||| |||  ||||||||||||||||||||||  | ||    
T  30055501 ggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaatg 30055600  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     ||||||||||||||||  ||||||||||| ||||||||| |||||||||| ||||||||||||    
T  30055601 acatcaaaagttcagtcctcatagtatcattaattcatcagattaacaagactacacttaatct 30055664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 31579255 - 31579088
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtct----- 166  Q
    ||||||||||||||||||||||| ||||| |       ||||||||||||| ||||||||||||| |||  ||||||||||||||||||||   |         
T  31579255 ggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttatac 31579156  T
Q  167 agtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    | || ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  31579155 aatgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttaatct 31579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 31520909 - 31520748
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||| ||||||||||| |||||       ||||||||||| | |||| |||||||| | | ||||||||||| ||| |||||||  ||||     
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtga 31520810  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  31520809 catcaaaagttcagtc-ccatagtatcatcaattcattaaattaacaagactacacttaatct 31520748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 41765264 - 41765102
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||| |||||||||||||||||||||       | | |||| || | |||| |||||||||||| ||||||| |||||||||||||||   ||||    
T  41765264 ggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaatactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacggtgg 41765165  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| |||||  ||||||||||||||||||||| |||||||||| | ||||||||||    
T  41765164 catcaaaagtccagtcctcatagtatcatcaattcatcagattaacaagactgcacttaatct 41765102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 23111167 - 23111327
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||| |||||||||||||| |||||       ||||||||||||| ||||||||||||| | ||||||||||||| ||||| |||||  | |||||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||  |  | ||||||||||||||||| | |||||||||| ||||||||||||    
T  23111267 tcaaaagttcaaccatcgtagtatcatcaattcattagattaacaagactacacttaatct 23111327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 37109847 - 37110007
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||||||||||||| |||||||| |||| |||  ||||||||||||||| ||||||  | ||     
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 37109946  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||   ||| |||||||||||||||| |||||||||| ||||||||||    
T  37109947 catcaaaagttcagtcattataatatcatcaattcatcagattaacaagactacacttaat 37110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 44413525 - 44413403
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||| |||||||  | ||  ||||||||||| |||||||||||||| ||||||||||||    
T  44413525 tgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaaatcaaaagttcggtctccatagtatcttcaattcatcaa 44413426  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||||  ||||||||||||    
T  44413425 attaacaaggctacacttaatct 44413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 37346997 - 37347159
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||||| |||||       ||||||||||| | |||| |||||||| | |  |||||||||||||| |||||||  ||||     
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtga 37347096  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||||||||||||| || ||||||||| || ||||||||||||    
T  37347097 catcaaaagttcagtcctcatagtatcatcaatttattaaattaacaggactacacttaatct 37347159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 48928466 - 48928321
Alignment:
Q  88 aagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtc 187  Q
    |||||||||||||||       |||||||| |||| ||||||||||||||||| ||||||| ||||||||| |||||   ||| ||||||||||||||||    
T  48928466 aagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtc 48928367  T
Q  188 tccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     ||||||||| |||||||||||| |||||||||| | ||||||||||    
T  48928366 -ccatagtattatcaattcatcagattaacaagattgcacttaatct 48928321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 25691729 - 25691568
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaa-caccccactgtttgtctagtggc 172  Q
    |||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||| ||||||||||  ||| ||||||||||  ||||||    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaagtattgtgagtaattacctcactgtttgtacagtggc 25691630  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||| ||||||||    ||||||| |||||||||||| |||||||| |||||| |||||||    
T  25691629 atcaacagttcagttcttatagtattatcaattcatcatattaacaaaaatacatttaatct 25691568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 17842772 - 17842612
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||||||||||||| |||||||| |||| |||  ||||||||||||||| ||||||  | ||     
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 17842673  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||| ||||||   ||| |||||||||||||||| |||||||||| ||||||||||    
T  17842672 catcaaaagctcagtcattataatatcatcaattcatcagattaacaagactacacttaat 17842612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 7334768 - 7334931
Alignment:
Q  71 gggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||| ||||||||| |||||||||       | ||||||||||| |||||||| |||  |||  ||||||||||||||||||||||  | ||    
T  7334768 gggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatg 7334867  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     |||||||||||||||   |||||||||||||| ||||||  ||||||||| ||||||||||||    
T  7334868 acatcaaaagttcagttctcatagtatcatcaactcatcagcttaacaagactacacttaatct 7334931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 27283719 - 27283881
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| || | |||||       ||||||||||||| ||||||||||||| |||  ||||||||||||||| ||||||  | ||     
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatga 27283818  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     |||||||||||||||  |||||||| ||||||| |||| |||||||||| || |||||||||    
T  27283819 aatcaaaagttcagtcctcatagtattatcaatttatcagattaacaagactatacttaatct 27283881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 38258521 - 38258682
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||| ||||||||||| | |||||       ||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||||||  | || |    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| ||  ||||||||||||||||||||| |||||||||| | ||||||||||    
T  38258621 atcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatct 38258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 10359400 - 10359242
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||  ||||| |||||||||||| |||||||||| || ||| ||| |  ||||     
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagtga 10359301  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaa 231  Q
    |||||||||||||||||  |||||||||||||||||||| || ||||||| |||||||||    
T  10359300 catcaaaagttcagtct-gatagtatcatcaattcatcagatcaacaagactacacttaa 10359242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 9356012 - 9355850
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||||||||||||||||||||||       |||||| |||||| |||| ||| |||| ||| ||||| || ||||||||||||||  ||||     
T  9356012 ggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagtga 9355913  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||   |||| |||| | ||||||||| |||||||||| ||||||||||||    
T  9355912 catcaaaagtttagttctcatattatcgttaattcatcagattaacaagactacacttaatct 9355850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 34362334 - 34362205
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||| | ||||||||||        |  ||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||    
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 34362235  T
Q  172 catcaaaagttcagtctccatagtatcatca 202  Q
    |||| ||||||||||   |||||||||||||    
T  34362234 catc-aaagttcagttctcatagtatcatca 34362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 10481619 - 10481742
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    ||||||||||| |||||||| |||| | |  ||||||||||||| |||||||||  | || |||||||| ||||||||  ||||||||||||||||||||    
T  10481619 tgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagtctttatagtatcatcaattcatca 10481718  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||| ||| ||||||||    
T  10481719 gattaacaagactacgcttaatct 10481742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 11071182 - 11071343
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatg-annnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||||||||||||||||||| |||| |       ||| ||||||  | |||| |||||||| | | | ||||||||| |||||||||||  |||| |    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||   ||||||||||||||||||||| |||||||| | ||| ||||||||    
T  11071282 atcaaaagttcagttctcatagtatcatcaattcatcagattaacaacactacgcttaatct 11071343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 32593327 - 32593232
Alignment:
Q  119 aacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaatta 215  Q
    |||| |||| ||| |||||||| ||||||| ||||||||||||| | | |||| |||||||||||||||| || |||||||||||||||||| ||||    
T  32593327 aacactatagcattaaaagtgtagtgagtagcaccccactgtttatatggtggtatcaaaagttcagtct-cacagtatcatcaattcatcagatta 32593232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 35353121 - 35353233
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaag-ttcagtctccatagtatcatcaattcat 208  Q
    |||||||| |||| |||| |||||||||||| ||||||| ||||||| |||||||    ||| |||||||| ||| ||| ||||||||||| ||||||||    
T  35353121 ggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccattgtttgtacgatggaatcaaaagtttctgtccccatagtatcaccaattcat 35353220  T
Q  209 caaattaacaaga 221  Q
    || ||||||||||    
T  35353221 cagattaacaaga 35353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 44598736 - 44598803
Alignment:
Q  167 agtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| |||| || |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  44598736 agtggcatcaaaaattcaatccccatagtatcataaattcatcagattaacaagaatacatttaatct 44598803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 43925120 - 43925238
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||||| ||  || |||| |||||||||||||||| ||||||      | || ||||||||||||||||| |||||||||||||| | ||||    
T  43925120 gtgaagttaacattgtagtataaaaaatgttgtgagtaacacctcactgtac----aatgacatcaaaagttcagtctacatagtatcatcaact-atca 43925214  T
Q  211 aattaacaagaatacacttaatct 234  Q
     | |||||| ||||||||||||||    
T  43925215 gactaacaataatacacttaatct 43925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 15672831 - 15672786
Alignment:
Q  189 ccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||| | |||||||||||||||||||||    
T  15672831 ccatagtatcatcaattcatcagactaacaagaatacacttaatct 15672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 37703590 - 37703546
Alignment:
Q  158 tgtttgtctagtggcatcaaaagttcagtctccatagtatcatca 202  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||    
T  37703590 tgtttgtatagtgacatcaaaagttcagtctccatagtatcatca 37703546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 37704241 - 37704292
Alignment:
Q  181 ttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||| ||||||||||||||||| |||| |||||||||| ||||||||||    
T  37704241 ttcagtccccatagtatcatcaatttatcagattaacaagactacacttaat 37704292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 38053499 - 38053592
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaa 203  Q
    ||||||||||| | |||||||| |||| |||  ||||||| |||| |||||||||  | || |||||||||||||||   |||||| |||||||    
T  38053499 ggtgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagtgtcatcaa 38053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 44598378 - 44598430
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttg 163  Q
    |||||||||| | ||||| ||||||| ||||||||||||||| | ||||||||    
T  44598378 gtgaagttaatactataatatcaaaaatgttgtgagtaacactctactgtttg 44598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 9e-54; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 8742062 - 8741899
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtctagtg 170  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||  | ||    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaatg 8741963  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8741962 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacaattaatct 8741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 5837557 - 5837717
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||| |||||| ||||||||||||       ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||  |||| ||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5837657 tcaaaatttcagtctccatagtatcatcaattcatcatattaacaagaatacacttaatct 5837717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 19119859 - 19120017
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||  ||||     
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagtga 19119958  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacactta 230  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||    
T  19119959 catcaaaagttcagtccccatagtgtcatcaattcatcagattaacaagaataaactta 19120017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 1429320 - 1429158
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||| |||||||||||||||||| |||||       ||||||||||||| |||| |||||||| | | |||||||||||||||||||||||  | |||    
T  1429320 ggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactgg 1429221  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1429220 catcaaaaattcagtctccatagtatcatcaattcatcaaattaacaagactacatttaatct 1429158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 30969499 - 30969337
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||   |||||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |  | ||     
T  30969499 ggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatga 30969400  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  30969399 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatct 30969337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 32563150 - 32563311
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||||||||||||||| | |||||       | ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||  |||| |    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| || || |||||||||||||||| |||||||||||||||||||||||    
T  32563250 atcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatacacttaatct 32563311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 8466745 - 8466904
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| ||| |||||||||||||       ||||||||||||| | |||||||||||||||||||| ||||||||| || |||||  |||||    
T  8466745 ggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacacccc-ctctttgtacagtgg 8466843  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
     |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  8466844 tatcaaaagttcaatccccatagtatcatcaattcatcaaattaacaagaatacacttaat 8466904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 15724490 - 15724648
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |  | ||     
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaatga 15724589  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  15724590 catc-aaagttcagtc-ccataatatcatcaattcatcaaattaacaagaatacacttaat 15724648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 5112488 - 5112326
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||||| |||||       ||||||||||| | |||||||| |||| | | |||||||||||||||||||||||  |||||    
T  5112488 ggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagtgg 5112389  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||    
T  5112388 catcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactatacttaatct 5112326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 7693230 - 7693392
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||    
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtgg 7693329  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| ||  | ||||||||||||||||| | ||||||| |||||| ||||||||    
T  7693330 catcaaaagttcaatcctcttagtatcatcaattcattagattaacatgaatacgcttaatct 7693392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 28416696 - 28416540
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||||||||||||||| |||||||        |||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||  |||||     
T  28416696 gaaaattctatggtgaagtcattagaatgatta-----gtgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtgga 28416602  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||||    
T  28416601 atcaaaagttcaatctccttaatatcatcaattcatcagattaacaagaatacacttaatct 28416540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 26268076 - 26268235
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||  ||||||||||||||||||       ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||   ||| ||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgaca 26268175  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatc 233  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||||||||||||| ||||||    
T  26268176 tcaaaagtttagtccacatagtatcatcaattcatcagattaacaagaatacaattaatc 26268235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 27330306 - 27330466
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||| || ||||||       ||||||||||||| |||||||||||||||||||  |||||||||  |||||||||  | |||    
T  27330306 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacaccttactgtttgtacaatgg 27330403  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  27330404 catcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatct 27330466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 9200233 - 9200395
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| | ||| |       ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||     
T  9200233 ggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtga 9200332  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| ||||  | ||||||||||||||||||| ||||||||||||||| |||||||    
T  9200333 catcaaaagtttagtcctcttagtatcatcaattcatcatattaacaagaatacatttaatct 9200395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 22019632 - 22019794
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||| |||||||||||||| || |||||||       ||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||| |||||     
T  22019632 ggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtga 22019731  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||||||||    
T  22019732 catcaaaagttaagtccccttagtatcatcacttcatcatattaacaagaatacacttaatct 22019794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 23116397 - 23116235
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||| ||||||| |||||         ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||    
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagtgg 23116298  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     |||||||||||||| | ||||||||||||||||||||| |||||||| | ||||||||||||    
T  23116297 aatcaaaagttcagtttacatagtatcatcaattcatcagattaacaatattacacttaatct 23116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 25501099 - 25500941
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       ||| ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||  | || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||| |||| | |||||||||||||||||||| ||||||||||||| |||||||    
T  25500999 tcaaaagttaagtccctatagtatcatcaattcatcagattaacaagaataaacttaat 25500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 36866762 - 36866924
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||  | |||    
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 36866861  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| | ||||||||| |||||||||| | ||||||||||||| |||||||    
T  36866862 catcaaaagttcagtcccgatagtatcaacaattcatcagactaacaagaatacatttaatct 36866924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 40133385 - 40133547
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||  | |||    
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatgg 40133484  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||| ||||| |||||||||| | ||||||||||||| |||||||    
T  40133485 catcaaaagttcagtccccataatatcaacaattcatcagactaacaagaatacatttaatct 40133547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 35933902 - 35934057
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||||||||||||||||||||||       | ||||||||||| ||||  |||||||||||||||||||||||| ||||       ||||||    
T  35933902 ggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact-------tagtgg 35933994  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  35933995 catcaaaagtccagtcaccatagtatcatcaattcatcagattaacaagaatacacttaatct 35934057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 14409501 - 14409340
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       |||||||| |||| ||||||||||||| ||| ||||||| ||||||||| ||  |   ||||    
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccactcttaatacggtgg 14409402  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||    
T  14409401 catcaaaagttcagtctc-atagtatcatcaattcatcagattaacaagactgcacttaatct 14409340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 25668688 - 25668804
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||||||     
T  25668688 ggtgaagttaacact-taacatcaaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtatcatcaattcatt 25668786  T
Q  210 aaattaacaagaatacac 227  Q
    | ||||||||||||||||    
T  25668787 agattaacaagaatacac 25668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 35511652 - 35511490
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||| ||||||||||||||||| |||||       | ||||||||||||||||||||||| | ||| ||||||||||| |||||||||||  ||||     
T  35511652 ggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtga 35511553  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  35511552 catcaaaagttcagtcatcatactatcaccaattcatcagattaacaagactacacttaatct 35511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 39572819 - 39572981
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||        || ||||||| | ||||| || |||| ||||||||||||||| |||||||||||  ||||     
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtga 39572918  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   ||||||||||| ||||||||| |||||||||||||||||||||||    
T  39572919 catcaaaagttcagttctcatagtatcataaattcatcagattaacaagaatacacttaatct 39572981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 36860423 - 36860585
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||| ||||  || |||| |||||||||||||||||||||||||||  | ||     
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaatga 36860522  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||||| |||||||||| | |||||||| |||| |||||||    
T  36860523 catcaaaagttcagtccccatagtatcaacaattcatcatactaacaagagtacatttaatct 36860585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 38528411 - 38528250
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| ||||        | ||||||||||| ||||||||||||| |||  |||||||||||||| ||||| |  ||||     
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagtga 38528312  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||    
T  38528311 catcaaaagttcagtct-catagtatcatcaattcatcagattaacaagactgcacttaatct 38528250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 699152 - 699312
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| ||||||||||| ||||||||||       | ||||||||||| |||| ||| |||| | | |||||||||||||||||||||||  |||| ||    
T  699152 aaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgaca 699251  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||    
T  699252 tcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacacttaatct 699312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 23954895 - 23954802
Alignment:
Q  142 gtgagtaacaccccactgtttgt-ctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  23954895 gtgagtaacaccccactgtttttactagtggcatcaaaagttcagtttccatagtatcatcaattcatcatattaacaagactacacttaatct 23954802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 6824599 - 6824492
Alignment:
Q  129 catcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagt--tcagtctccatagtatcatcaattcatcaaattaacaagaataca 226  Q
    |||||||||||||||||||||||| |||||||||||  |||| ||||||||||  ||||||| |||||||||||||||| |||| |||||||||||||||    
T  6824599 catcaaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatcaatttatcagattaacaagaataca 6824500  T
Q  227 cttaatct 234  Q
    ||||||||    
T  6824499 cttaatct 6824492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 24886142 - 24886266
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||| | ||||||||||||| |||  ||||||||||||||||||||||  | || ||||||||||||||||  |||||||||||||| |||||    
T  24886142 ggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaactcatc 24886241  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||| ||||||||||||    
T  24886242 atattaacaagactacacttaatct 24886266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 14919663 - 14919541
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||||||||||||||||| |||  ||||||||||| |||||||| | || || ||||||||||||||||  |||||||||||||| ||||||     
T  14919663 tgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtcctcatagtatcatcaactcatcat 14919564  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||| | ||||||||||||    
T  14919563 attaacaaaactacacttaatct 14919541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 22255219 - 22255344
Alignment:
Q  110 ggtgaagttaacattataacatcaaaag-tgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcat 208  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||| ||||||  | ||||||||||||||||||   |||| ||||||||||||||    
T  22255219 ggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaatggcatcaaaagttcagttctcatattatcatcaattcat 22255318  T
Q  209 caaattaacaagaatacacttaatct 234  Q
    || |||||||||| ||||||||||||    
T  22255319 cagattaacaagactacacttaatct 22255344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 33908245 - 33908395
Alignment:
Q  84 ggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttc 183  Q
    |||||||||||||||||||       |||||||| |||| |||| |||||||||||| ||||||| ||| |||||||||||   ||||||||||||||||    
T  33908245 ggtgaagtcatgagaatgaactttctggtgaagtcaacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagttc 33908344  T
Q  184 agtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||  ||||||||||||||||  ||| |||||||||| | ||||||||||    
T  33908345 agtcctcatagtatcatcaattattcagattaacaagactgcacttaatct 33908395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 22980794 - 22980955
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| |||| |||||| ||||||||||       ||||||||||||| ||||  ||||||| |   |||||||| |||||||||||||   | || |    
T  22980794 gaaaattttatgatgaagttatgagaatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgac 22980893  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  22980894 atcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactacacttaatct 22980955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 27318660 - 27318500
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||| | |||||||||||||||||||       ||||||||||||| || ||||| |||| ||| ||||||||||| |||||||||||  | || ||    
T  27318660 aaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgaca 27318561  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||| |||   || |||||||||||||||||| |||||||||| ||||||||||||    
T  27318560 tcaaaagtttagttctcacagtatcatcaattcatcatattaacaagactacacttaatct 27318500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 12910350 - 12910517
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgttt-----gtct 166  Q
    ||||||||||||||||||||||||| |||||       ||||||||||| | ||||||||||||| | | ||| |||||||||||||||||     ||      
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagtac 12910449  T
Q  167 agtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||| ||||||| || ||||||||||||    
T  12910450 agtgacatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacatgactacacttaatct 12910517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 31786821 - 31786659
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||| |||||||  |||||||||       ||||||||||||| |||| ||| |||| ||| ||||| |   |||||||||||||  |||||    
T  31786821 ggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtgg 31786722  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| ||  ||||||||||||||||||||| |||||||||| | ||||||||||    
T  31786721 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatct 31786659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 31705785 - 31705625
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||||||||||||||| | |||||       ||||||||||||| ||||||||||||| |||   ||||||||||| || ||||||  | || |    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||| |||||  | ||||||||||||||||||| |||||||||| ||||||||||||    
T  31705685 atcaaaagtccagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatct 31705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 15992636 - 15992553
Alignment:
Q  151 accccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagaatacacttgatct 15992553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 21088880 - 21088779
Alignment:
Q  133 aaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||| |||||||||| ||||||||||||||||  | || |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||| |||||    
T  21088880 aaaaatgttgtgagtgacaccccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagaatacatttaat 21088781  T
Q  233 ct 234  Q
    ||    
T  21088780 ct 21088779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 22974257 - 22974095
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||||||  ||  ||||||||| ||||||||||||  | |      
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaataa 22974158  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| |   |||| ||||||||| |||||| | |||||||| ||||||||||||    
T  22974157 catcaaaagttcaattctcatattatcatcaactcatcagaataacaagactacacttaatct 22974095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 42342775 - 42342893
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaat 213  Q
    ||||||| | ||||||||||||| |||||||||||| |||||||||||| |  |||| ||||||||  |   || || ||||||||||||||||||| ||    
T  42342775 aagttaatactataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaaaatt--tccccttagtatcatcaattcatcagat 42342872  T
Q  214 taacaagaatacacttaatct 234  Q
    |||||||||||||||||||||    
T  42342873 taacaagaatacacttaatct 42342893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 35826658 - 35826522
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||        |||||||||| | ||||||||||||| |||  ||||||||||  || |||||||  ||||     
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagtga 35826559  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcat 208  Q
    ||||||||||||||||  ||||||||||||| |||||    
T  35826558 catcaaaagttcagtcctcatagtatcatcagttcat 35826522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 7209000 - 7208877
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||||| |||||| |||| ||    ||||||||||| || ||||||  | || ||||||||||||||||  | ||||||||||||||||||    
T  7209000 ggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgacatcaaaagttcagtcctc-tagtatcatcaattcatc 7208902  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||| ||||||||||||    
T  7208901 agattaacaagactacacttaatct 7208877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 43308784 - 43308665
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaat 213  Q
    ||||||||||||||||||||||| |||  ||| |||||||| |||||| ||  | |||||||||||||||||||  |||||||||||||| ||||||  |    
T  43308784 aagttaacattataacatcaaaaatgtaatgaataacaccc-actgttcgtacaatggcatcaaaagttcagtcctcatagtatcatcaactcatcagct 43308686  T
Q  214 taacaagaatacacttaatct 234  Q
    |||||| | || |||||||||    
T  43308685 taacaaaactatacttaatct 43308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 17158166 - 17158048
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| |||||||| |||| |||  |||||||||| |||| ||||||  | || |||||||||||| |||   |||||||||| |||||||||    
T  17158166 gtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttc-gtcattatagtatcattaattcatca 17158068  T
Q  211 aattaacaagaatacactta 230  Q
     |||||||||| ||||||||    
T  17158067 gattaacaagactacactta 17158048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 35504436 - 35504525
Alignment:
Q  143 tgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||| ||| |||||| |  || ||||||||||||| ||   |||||||||||||||||||| |||||||||| ||||||||||    
T  35504436 tgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtatcatcaattcatcatattaacaagactacacttaat 35504525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 11898044 - 11898139
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||| |||||| |||||||||||   |||||||||||| |||  ||||  |||| ||||||||||| ||||  ||||||||||||||||||||    
T  11898044 aagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgacatcaaaagtttagtcctcatagtatcatcaattcatc 11898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 13956520 - 13956428
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgt 164  Q
    ||||||||||| ||||||||||||| |||||         ||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||    
T  13956520 ggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgt 13956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 8436970 - 8437081
Alignment:
Q  76 aattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatc 175  Q
    |||||||  ||||||||||||||||||       |||||| |||||| |||| | || ||||||| |||||||||| |||| |||||||  |||| ||||    
T  8436970 aattctaatgtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatc 8437069  T
Q  176 aaaagttcagtc 187  Q
    ||||||||||||    
T  8437070 aaaagttcagtc 8437081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 16004552 - 16004474
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaat-gannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaa 149  Q
    ||||||||||||||| ||||||||||||| ||       ||||||||||||| ||||||||||||| ||||||||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 26317859 - 26317774
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccac 157  Q
    ||||||||||||| ||||||||||| |||||       ||||||||||||| ||||||||||||| | |   ||||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccac 26317774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 5829897 - 5830034
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataa----catcaaaagtgttgtgagtaacaccccactgtttgtcta 167  Q
    ||||||||||| ||||||||| | | |||||       |||||||||||||||||||    ||| |||| |||  |||||||||||| || ||||||  |    
T  5829897 ggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtaca 5829996  T
Q  168 gtggcatcaaaagttcagtctccatagtatcatcaatt 205  Q
     || ||||||||||| ||||  ||||||||||||||||    
T  5829997 atgacatcaaaagtttagtcctcatagtatcatcaatt 5830034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 22255615 - 22255659
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacacccca 156  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||||    
T  22255615 tgaagttaacactataacatcaaaaatgtaatgagtaacacccca 22255659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 8513233 - 8513395
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||     
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 8513332  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  8513333 catcaaaagttcagtccccataatatcatcaattcatcatattaacaagaatacacttgatct 8513395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 4319007 - 4318845
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||     
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagtga 4318908  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||  | |||||||||||||||||||| | |||||||||||||||||||||||    
T  4318907 catcaaaagttcaacccccatagtatcatcaattcattagattaacaagaatacacttaatct 4318845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 29182165 - 29182325
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| ||||||||||||||||||||||       | ||||||||||| ||||||||||||||||||||||||||||||||||||||| |  |||| ||    
T  29182165 aaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtca 29182264  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  29182265 tcaaaagttcagtctccatattatcatcaattcatcagattaataagaatacacttaatct 29182325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 30353540 - 30353380
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||| | | ||||||||||  |||||||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    || | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30353440 tcgatagttcagtctccatagtatcatcaattcatcatataaacaagaatacacttaatct 30353380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 224
Target Start/End: Original strand, 6088910 - 6089060
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       ||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||  |||||||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaata 224  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  6089010 tcaaaagttcagtcaccatagtatcatcaattcatcagattaacaagaata 6089060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 15491654 - 15491777
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |  |||||||||||||||||||||    
T  15491654 gtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagccctcatagtatcatcaattcatca 15491753  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||||| ||||||||||    
T  15491754 gattaacaagaatgcacttaatct 15491777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 3880123 - 3879965
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| ||||||||       ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||  | ||     
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatga 3880024  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacactta 230  Q
    ||||||||||||| || |||||||||||||||||||||| | ||||||||||| |||||    
T  3880023 catcaaaagttcaatccccatagtatcatcaattcatcagactaacaagaatatactta 3879965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 7235218 - 7235057
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| ||||||||||       |||||||| |||| ||||||||||||||||| ||||||| |||||||||||||||   |||     
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtgc 7235119  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||||||| | ||||||||||    
T  7235118 catcaaaagttcagtct-catagtattatcaattcatcagattaacaagactgcacttaatct 7235057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 33893186 - 33893025
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||| ||||||| ||||| |        |||||||||||| ||||||||||||||||||||||||||||||||||| |||||  | ||     
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatga 33893087  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     || |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  33893086 tattaaaagttcagtc-ccttagtatcatcaattcatcagattaacaagaatacacttaatct 33893025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 1945833 - 1945994
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnn-ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    ||||||||||| ||||||||||| |||||||        ||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||  | ||    
T  1945833 ggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatg 1945932  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
     |||||||||||||| |  ||||||||||| |||||||||| ||||||||| ||||||||||    
T  1945933 acatcaaaagttcagccctcatagtatcatgaattcatcaagttaacaagactacacttaat 1945994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 21017258 - 21017134
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||||| ||  || |||| ||||||||||||||||||| | |||||  | ||||||||||||||||||| |||||||||||||||||||||    
T  21017258 ggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggcatcaaaagttcagtccccatagtatcatcaattcatc 21017159  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | | ||||||||||| |||||||||    
T  21017158 agactaacaagaataaacttaatct 21017134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 20768087 - 20768233
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||||||||||||||||||||||||||       |||||||| |||| |||| |||||||||||| ||||||| || || | ||||||| |||||||    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcatcc-attgtttgt-tagtggc 20768184  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaaga 221  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||||||    
T  20768185 atcaaaagttcagtcctcatagtatcattaattcatcagattaacaaga 20768233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 18498433 - 18498565
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaaca-ccccactgtttgtctagtg 170  Q
    |||||| ||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||| ||||| |||| |||||| ||||||  ||||    
T  18498433 ggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtacagtg 18498532  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaa 203  Q
    |||||||||||||||||  ||||||||||||||    
T  18498533 gcatcaaaagttcagtcctcatagtatcatcaa 18498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 5627391 - 5627551
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| ||||||||||| |||||||       ||||||||||||| |||||||| |||| | |  |||||||||||||||| |||||  | ||     
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaatga 5627490  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| |  |||||||| ||||||||||||  ||||||||| ||||||||||    
T  5627491 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaat 5627551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 7055399 - 7055239
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| |||||||       ||||||||||||| |||||||| |||| | |  | ||||||||| |||| |||||  | ||     
T  7055399 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatga 7055300  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| |  |||||||||||||||||||||  ||||||||| ||||||||||    
T  7055299 catcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaat 7055239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 33618834 - 33618996
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||||||| |||  |       |||||||| |||| |||  |||||||||||| ||||||| || |||| | |||||   ||||    
T  33618834 ggaaaattctacggtgaagtcatgggaaatacttttctggtgaagtcaacactatcgcatcaaaagtgtagtgagtagcaacccattatttgtacggtgg 33618933  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||| | ||||||||||    
T  33618934 catcaaaagttcagttctcatagtatcatcaattcatcagattaacaagactgcacttaatct 33618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 6091363 - 6091205
Alignment:
Q  75 aaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcat 174  Q
    ||||||||| |||||||||||| ||| |       ||| ||||||||||  |||||| |||| ||| ||||||||||| ||| |||||||  | || |||    
T  6091363 aaattctattgtgaagtcatgaaaataatttttttggtaaagttaacatg-taacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccat 6091265  T
Q  175 caaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||   | ||||||||||||||||| | |||||||| | ||||||||||||    
T  6091264 caaaagttcagtactcgtagtatcatcaattcattagattaacaaaactacacttaatct 6091205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 5e-52; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 34948306 - 34948146
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| ||||||||||||||||||||||       || |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||    
T  34948206 tcaaaagttcagtcctcataatatcatcaattcatcatattaacaagaatacacttaatct 34948146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 23761114 - 23761234
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaat 213  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| ||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtatcatcaattcatcagat 23761213  T
Q  214 taacaagaatacacttaatct 234  Q
    |||||||||||||||||||||    
T  23761214 taacaagaatacacttaatct 23761234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 73 - 232
Target Start/End: Original strand, 4597994 - 4598152
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| |||||||||||||| |||||||       ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatcaaa-gtgttgtgagtaacaccccactgtttgtacagtggc 4598092  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||| || |||  |||||||||||||| |||||||||||||||||||||    
T  4598093 atcaaaagttcagtccccttagactcatcaattcatcatattaacaagaatacacttaat 4598152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 49375966 - 49376129
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnn-ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    ||||||||||| |||||||||||||||||||        |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||  ||||    
T  49375966 ggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacagtg 49376065  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||| ||||    
T  49376066 gcatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagattacgcttgatct 49376129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 29584409 - 29584249
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||| || ||||||       ||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||  | |||    
T  29584409 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacacctcactgtttgtacaatgg 29584312  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  29584311 catcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatct 29584249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 25701268 - 25701106
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||||| |||||       ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||     
T  25701268 ggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagtga 25701169  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||| || |||||| |||||    
T  25701168 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaggactacactaaatct 25701106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 27396618 - 27396776
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||  | || ||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||  |||  ||||||||||||||||||||| |||||||||||||||||||||    
T  27396718 tcaaaagtttcgtcctcatagtatcatcaattcatcagattaacaagaatacacttaat 27396776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 54499412 - 54499287
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgt-ctagtggcatcaaaagttcagtctccatagtatcatcaattcat 208  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  54499412 ggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctctatagtatcatcaattcat 54499313  T
Q  209 caaattaacaagaatacacttaatct 234  Q
    || ||||||||||||| |||||||||    
T  54499312 catattaacaagaatatacttaatct 54499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 19089666 - 19089502
Alignment:
Q  70 agggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagt 169  Q
    ||||||||||||||||||||||||| ||||| |       | ||||||||||| ||||| ||||||| |||  |||||||||||||||||||||| || |    
T  19089666 agggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataat 19089567  T
Q  170 ggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    | ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  19089566 gacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatct 19089502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 55241315 - 55241154
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||        |||||||||| | ||||  ||||||| ||||| |||||||||||||||||||||  |||||    
T  55241315 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagtgg 55241216  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||||||||||| |||| | ||| |||||||||||||||||    
T  55241215 catcaaaagttcagtccccatagtatcatcaatttatcaga-taagaagaatacacttaatct 55241154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 17167715 - 17167875
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||| | || |||||       | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||  | || ||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  17167815 tcaaaagttcattctccatagtatcattaattcatcagactaagaagaatacacttaatct 17167875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 17173292 - 17173452
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||| | || |||||       | ||||||||||||||||| ||||||| |||||||||||||||||||||||||||  | || ||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| ||||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  17173392 tcaaaagttcaatctccatagtatcattaattcatcagactaagaagaatacacttaatct 17173452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 36493897 - 36493737
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||||||| ||| |       ||||||||||| | |||| |||||||| | | ||||||||||||||| |||||||  |||| ||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  36493797 tcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactacacttaatct 36493737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 38011854 - 38012014
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||| ||||||||||||       |||||||| |||| ||||||||||||||||| |||| || |||||||||||||||   |||     
T  38011854 ggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacggtgc 38011953  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||||| ||||| ||| |||||||||||| |||||||||| ||||||||||    
T  38011954 catcaaaagttcagtccccataatattatcaattcatcagattaacaagactacacttaat 38012014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 55478106 - 55477940
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtct----a 167  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||| |||   ||||||||| ||||||||||| |    |    
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgtaca 55478007  T
Q  168 gtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     || ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  55478006 atgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatct 55477940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 7703517 - 7703647
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| | |||||||||||||||       ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||   |||     
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtga 7703616  T
Q  172 catcaaaagttcagtctccatagtatcatca 202  Q
    |||||||||||||||| ||||||||||||||    
T  7703617 catcaaaagttcagtccccatagtatcatca 7703647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 25184113 - 25184275
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||| |||  |||||||||| | |||||||||  | ||     
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 25184212  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| |||||||| ||| |||||||||||||| |||||| |||||||||| ||||||| ||||    
T  25184213 catccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatct 25184275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 28003197 - 28003035
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       |||||||| |||| |||| |||||||||||| || ||||  || |||||||||||  ||||     
T  28003197 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagtga 28003098  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||  |||||||||| | ||||||||||    
T  28003097 catcaaaagttcagtcatcatagtatcatcaattcatcggattaacaagactgcacttaatct 28003035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 35021246 - 35021084
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||  | |||    
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacattgg 35021147  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    | |||||||||  |||  | ||||||||||||||||| | |||||||| | ||||||||||||    
T  35021146 cgtcaaaagtttcgtcctcgtagtatcatcaattcattagattaacaaaactacacttaatct 35021084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 37775670 - 37775829
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||| ||||||||||| | |||||       |||||||||| || ||||| || |||| |||||||||||||||||||||||||||  ||||||    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||   | || ||||||||||||||||||| |||||||||||||||||||||||    
T  37775770 atcaaaagttc--cccccttagtatcatcaattcatcagattaacaagaatacacttaatct 37775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 32592133 - 32592253
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| || |  ||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||     
T  32592133 tgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacatcaaaagttcagtccccttagtatcatcaattcatcag 32592232  T
Q  212 attaacaagaatacacttaat 232  Q
    ||||||||||||||| |||||    
T  32592233 attaacaagaatacatttaat 32592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 33341397 - 33341558
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtg----ttgtgagtaacaccccactgtttgtctagt 169  Q
    |||||||||| ||||||||||||||||||       |||||| |||||| |||| |||||||| ||    ||| ||| |||||||||||||||||  |||    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaattgattgttgcgaggaacaccccactgtttgtacagt 33341496  T
Q  170 ggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  33341497 ggcatcaaaagttcagtc-ccatagtatcatcaattcatcagattaacaagaatatacttaat 33341558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 39397918 - 39398051
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||  ||||     
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtga 39398017  T
Q  172 catcaaaagttcagtctccatagtatcatcaatt 205  Q
    ||||||||||||||||| |  |||||||||||||    
T  39398018 catcaaaagttcagtcttctcagtatcatcaatt 39398051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 19440860 - 19440697
Alignment:
Q  72 ggaaaattctatggtgaa-gtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||||||||| |||||||||||||       ||||| ||||||| ||||||||||||| |||  ||| |||||| |||| ||||||  | ||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatg 19440761  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||    
T  19440760 gcatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagactacacttaatct 19440697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 37663950 - 37663790
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       | ||||||||||| ||  |||| |||| |||  ||||||||||||||||||||||  | ||     
T  37663950 ggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatga 37663853  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  37663852 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatct 37663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 50764784 - 50764892
Alignment:
Q  126 taacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatac 225  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||| ||  ||||||||||||||||||| | ||||||||||||||    
T  50764784 taacatcaaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagttcaatcctcatagtatcatcaattcattagattaacaagaatac 50764883  T
Q  226 acttaatct 234  Q
    | |||||||    
T  50764884 atttaatct 50764892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 33816742 - 33816582
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| |||| | |||||||||||||||       |||||||| |||||| || |||||||||||| ||||||| |||| |||| ||| |   ||||||    
T  33816742 aaaattatatgcttaagtcatgagaatgatttttctggtgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggca 33816643  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||    
T  33816642 tcaaaagttcagtctccatagtatcatcaatttatcagattaacaagattgcacttaatct 33816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 37287733 - 37287846
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnn-ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||||||||||| ||||||||||        ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  37287733 ggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 37287832  T
Q  171 gcatcaaaagttca 184  Q
    ||||||||||||||    
T  37287833 gcatcaaaagttca 37287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 47253751 - 47253878
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       ||||||||||||| |||| ||||||||||||||||||||||| |||| ||||| |  |||| ||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  174 tcaaaagttcagtctccatagtatcatca 202  Q
    ||||||||||||||  |||||||||||||    
T  47253850 tcaaaagttcagtcctcatagtatcatca 47253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 9139247 - 9139407
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| | |||       |||||||||||| ||||| ||| |||| |   |||||||||||||||| ||||||  ||||     
T  9139247 ggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaata--gtgagtaacaccccaccgtttgtacagtga 9139344  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||| ||||||||| || ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  9139345 cataaaaagttcaatccccatagtatcatcaactcatcagattaacaagactacacttaatct 9139407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 30002835 - 30002705
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||| |||||||||||||||| | |||||       ||||||||||||| | || ||||||||||||||||||||||||| ||||||||||  ||||     
T  30002835 ggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagtga 30002736  T
Q  172 catcaaaagttcagtctccatagtatcatca 202  Q
    ||||||||||||||||| | |||||||||||    
T  30002735 catcaaaagttcagtcttcttagtatcatca 30002705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 34361702 - 34361543
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||| |||||||| |||| |||  ||||||||||||||||||||||  | ||     
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaatga 34361603  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||| |||||||||| || |||| |||||||||||||||   ||||||| | ||||||||||    
T  34361602 cattaaaagttcagcct-cataatatcatcaattcatccggttaacaaaattacacttaat 34361543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 46888328 - 46888206
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||| | ||||||||||||| ||| |||||||| |||||||| |||||  || |||||||||||||||||| ||||| |||| | |||||||||     
T  46888328 tgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtccccatactatcgttaattcatcag 46888229  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||| | ||||||||||||    
T  46888228 attaacaaaactacacttaatct 46888206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 879759 - 879597
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| || ||||||||||||||||| |       |||||||| |||| ||||||||||||| |||  ||||||||||| || |||||||  | ||     
T  879759 ggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatga 879660  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| | ||| |||||||||||||| |||||| |||||||||| ||||| ||||||    
T  879659 catcaaaagtttaatcttcatagtatcatcaactcatcagattaacaagactacacataatct 879597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 42199729 - 42199889
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||| ||||||||||| |||| |||||||       ||||||||||| | ||||||||||||| |||  ||||||| |||||| | |||||  | ||     
T  42199729 ggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatga 42199828  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||| |||||||||| |  ||||||||||||||||||||| |||||||||| ||||||||||    
T  42199829 cataaaaagttcagccctcatagtatcatcaattcatcagattaacaagactacacttaat 42199889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 32912791 - 32912631
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||| ||||||||||||| |||  |||||||||||| | | |||||  | ||     
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaatga 32912692  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
     |||||||||||||    |||| ||||||||||| ||||  ||||||||| ||||||||||    
T  32912691 tatcaaaagttcagcactcataatatcatcaatttatcaggttaacaagactacacttaat 32912631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 5048174 - 5048014
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||  |||||| ||||||||||       |||||||| |||  ||||||||||||||||| |||||||  ||| ||||||||||    ||  |    
T  5048174 aaaattctataatgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgata 5048075  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||  |||||||||||||||||||| | |||||||||| | || |||||||    
T  5048074 tcaaaagttcagttcccatagtatcatcaattcatgagattaacaagactgcatttaatct 5048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 4934353 - 4934251
Alignment:
Q  133 aaaagtgttgtgagtaacacccc-actgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaa 231  Q
    |||| ||| |||||||||||||| | |||||||  | |||||||||||||||| ||  ||||||||||||| ||||||| |||||||||| |||||||||    
T  4934353 aaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagttcaatcctcatagtatcatcatttcatcagattaacaagactacacttaa 4934254  T
Q  232 tct 234  Q
    |||    
T  4934253 tct 4934251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 32579444 - 32579592
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttg-tcta--g 168  Q
    |||||||| |||||||||||  |||||||||       |||||||| |||||||||||||||||||||  ||||||| ||||||| |||||| | ||  |    
T  32579444 ggaaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcaccccagtgtttgttgtacgg 32579543  T
Q  169 tggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaaca 218  Q
    || ||||||||||| ||||| |||||||| |||| ||||||| |||||||    
T  32579544 tgccatcaaaagtttagtct-catagtattatcagttcatcagattaaca 32579592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 35025799 - 35025669
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| ||||||||||| |||||       |||||||| |||| |||| |||||||||||| ||||||| ||||||||||||| |    ||     
T  35025799 ggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttga 35025700  T
Q  172 catcaaaagttcagtctccatagtatcatca 202  Q
    ||||||||||||||||  | |||||||||||    
T  35025699 catcaaaagttcagtcctcgtagtatcatca 35025669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 232
Target Start/End: Original strand, 6864038 - 6864195
Alignment:
Q  75 aaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcat 174  Q
    ||||| |||||||| |||||||||||||       |||||||||| || ||||||||||||| | |  ||| ||||| || ||| |||||  | | ||||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcat 6864137  T
Q  175 caaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||| |||||  |||||||||||||||| |||| |||||||||| |||| |||||    
T  6864138 caaaagtccagtcctcatagtatcatcaatttatcagattaacaagactacatttaat 6864195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 7152317 - 7152235
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccc 154  Q
    ||||||||||||||||||||||||  |||||       ||| ||||||||||||||||||||||||| | |||||||||||||    
T  7152317 ggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 4205116 - 4205208
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgt 164  Q
    |||||||||||||||||||||| || |||||       | ||||||||||| ||||| ||||||| |||| ||| ||||||||||||||||||    
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgt 4205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 50697242 - 50697401
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| ||||||||||| | |||||        ||||||| |||| |||||||| |||| | |   ||||||||||| || ||||||  | ||     
T  50697242 ggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtacaatga 50697341  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||| | ||  ||||||||||||||||||| |||||||||| ||||||||||    
T  50697342 catcaaaagttcaat-tctctagtatcatcaattcatcagattaacaagactacacttaat 50697401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 23518473 - 23518393
Alignment:
Q  113 gaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccata 193  Q
    |||||||||| |||||||| |||| ||| |||| |||||||||||||||  |  ||||||||||||| |||||| ||||||    
T  23518473 gaagttaacactataacattaaaactgtagtgactaacaccccactgttaatacagtggcatcaaaaattcagtttccata 23518393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 17272011 - 17272077
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagt 138  Q
    ||||||||||||||||||||| || ||||||       ||||||||||||| |||||||||||||||    
T  17272011 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagt 17272077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 17272068 - 17272126
Alignment:
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||    |||||||||||||||||| |||||  ||||||||||||||||    
T  17272068 catcaaaagttcagtct----agtatcatcaattcatcagattaatgagaatacacttaatct 17272126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 4396326 - 4396419
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtc 165  Q
    |||||||||||| |||||||||| | |||||        |||||||||||| |||||||| |||| |||  ||||||||||||||| |||||||    
T  4396326 ggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtc 4396419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 1815409 - 1815455
Alignment:
Q  180 gttcagtctccatagtatcatcaattcatcaaattaacaagaataca 226  Q
    ||||||||  ||||||||||||||||||||| |||||||||| ||||    
T  1815409 gttcagtcctcatagtatcatcaattcatcatattaacaagactaca 1815455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 3042741 - 3042779
Alignment:
Q  194 gtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  3042741 gtatcatcaattcatcatattaacaagattacacttaat 3042779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 38811813 - 38811843
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  38811813 ggaaaattctatggtgaagtcatgagaatga 38811843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 38812308 - 38812278
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  38812308 ggaaaattctatggtgaagtcatgagaatga 38812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 102
Target Start/End: Complemental strand, 20097537 - 20097509
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||    
T  20097537 aaaattctatggtgaagtcatgagaatga 20097509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 53124287 - 53124372
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccac 157  Q
    |||||||| |||| ||||||||| | |||||       ||||||||||||| ||||||||||||| | |  |||||||||||||||    
T  53124287 ggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacaccccac 53124372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 5e-49; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 47279196 - 47279347
Alignment:
Q  83 tggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagtt 182  Q
    ||||||||||||||||||||       ||||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  47279196 tggtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagtt 47279295  T
Q  183 cagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  47279296 cagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatct 47279347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 3309144 - 3309305
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||| |||||||||||||||       ||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacaccc-actgtttgtacagtgg 3309242  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     |||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  3309243 tatcaaaagttcaatcttcatagtatcatcaattcatcagattaacaagaatacacttaatct 3309305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 48620672 - 48620795
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| || |||||||||||||||||||    
T  48620672 gtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtccccttagtatcatcaattcatca 48620771  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||||||||||||||||    
T  48620772 gattaacaagaatacacttaatct 48620795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 38823210 - 38823372
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||| ||||||||| |||| |||||||| ||||| ||||||||||||||| |||||  ||||     
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtgt 38823309  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  38823310 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatct 38823372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 15752027 - 15752187
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       ||||||||||||| |||||||| |||| | | |||||||||||| ||||||||||  | |||||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatct 15752187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 34012557 - 34012395
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       | ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||||  |||||    
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34012458  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||    
T  34012457 catcaaaagttcagtcatcatactatcatcaattcatcagattaacaagattacacttaatct 34012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 11742530 - 11742369
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||| ||||||| ||||||||||       ||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||  ||||     
T  11742530 ggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacagtga 11742431  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||||||    
T  11742430 catcaaaagttcagtc-ccataatatcatcaattcatcggattaacaagaatacacttaatct 11742369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 27533122 - 27532999
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||| |||||||||| ||||| |||||| |||||| |||||  |||||||||||||||||| || |||||||||||||||||||||    
T  27533122 ggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagttcaatccccatagtatcatcaattcatc 27533023  T
Q  210 aaattaacaagaatacacttaatc 233  Q
    | ||||||||||||||||||||||    
T  27533022 agattaacaagaatacacttaatc 27532999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 16415641 - 16415804
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccac-tgtttgtctagtg 170  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||| |||| |||||||||||| ||||||||||||| |  |||||||  ||||    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacagtg 16415740  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| |  ||||||||||||||||||| | |||||||||| ||||||||||||    
T  16415741 gcatcaaaagttcagccatcatagtatcatcaattcattagattaacaagactacacttaatct 16415804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 2959744 - 2959906
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       | ||||||||||| ||||||||||||| ||| || ||||||| ||||||||||||  ||||     
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtga 2959843  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||| |||||||||||||| ||||||||||  |||||||||||    
T  2959844 catcaaaagttcagtcctcatagtgtcatcaattcatcagattaacaagaccacacttaatct 2959906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 3534967 - 3535090
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||  |||| |||||||||||||||| || || ||| ||||||||||||    
T  3534967 gtgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatcaattcatca 3535066  T
Q  211 aattaacaagaatacacttaatct 234  Q
     ||||||||||||||| |||||||    
T  3535067 gattaacaagaatacatttaatct 3535090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 9903194 - 9903072
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||  |||| ||||||||||||| ||  |||| |||||||||||||||||    
T  9903194 tgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttcaatccacatactatcatcaattcatcaa 9903095  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||||| ||||||||||||    
T  9903094 attaacaagactacacttaatct 9903072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 10182201 - 10182026
Alignment:
Q  59 aagaagaaagaagggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccact 158  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||       ||||||||||| | | |||||| |||| | | ||| ||||||| |||||    
T  10182201 aagaataaagagaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccact 10182102  T
Q  159 gtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||  |||||||||||||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||||||    
T  10182101 gtttgtacagtggcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaagattacacttaatct 10182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 27267376 - 27267217
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||| |||||||||||||||||       ||||||||||||| ||   ||| |||| ||| |||||| ||||||||||||||||  |||||    
T  27267376 ggaaaattatatg-tgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacaccccactgtttgtacagtgg 27267280  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  27267279 cattaaaagttcagtctccatagtatcatcaattcatcagattaacaagactacacttaatct 27267217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 1547283 - 1547413
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||||||| |||| ||||||||||||||| |||||||||||  |||||    
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagtgg 1547382  T
Q  172 catcaaaagttcagtctccatagtatcatca 202  Q
    |||||||||||||||   |||||||||||||    
T  1547383 catcaaaagttcagttctcatagtatcatca 1547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 42721035 - 42721197
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       |||||||||| |  |||| ||| |||| | | |||||||||||||||||||||||  |||      
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagtaa 42721134  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||    
T  42721135 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagactacacttaatct 42721197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 14758038 - 14758199
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| || |||||||||||||||||||       |||||||| |||| ||||||||||||||||| ||||||| ||| | |||||||||   |||||    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggc 14758137  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| ||||||| |||||||||||| | |||||||||| | ||||||||||    
T  14758138 atcaaaagttcagtccccatagtttcatcaattcattagattaacaagactgcacttaatct 14758199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 41926161 - 41926321
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||| |||| |||||       | ||||||||| | ||||||||||||| | | |||||||| | ||||||||||||  |||||||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaatatagtgagtaatatcccactgtttgtacagtggca 41926260  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||| |||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||    
T  41926261 tcacaagttcagtccctatagtatcatcaattcatcagattaacaagattacacttaatct 41926321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 7079254 - 7079081
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccact-----------gt 160  Q
    |||||||| |||||| ||||||||| |||||       ||||||||||||| ||||| |||||||||||||||||||||||||||||           ||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactaacacctcactgt 7079155  T
Q  161 ttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||  | || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7079154 ttgtacaatgacatcaaaagttcagtcatcatagtatcatcaattcatcaaattaacaagaatacacttaatct 7079081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 18422647 - 18422809
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||||||||||||| ||||||||||||| | |   |||||||||||||| ||||||  | ||     
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatga 18422746  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||    
T  18422747 catcaaaagttcagtcctcataatatcatcaattcatcagattaacaagattacacttaatct 18422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 31621733 - 31621571
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||||||||||||||        ||||||| |||| |||||||||||| ||||  |||||| |||||| || |||||   ||||    
T  31621733 ggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtgg 31621634  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  31621633 catcaaaaattcagtccccatagtatcatcaattcatcagattaacaagactgcacttaatct 31621571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 39393379 - 39393541
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||| ||||||||||         ||||||||||| |||| ||||||||||||||||||||| ||  || |||||||  |||||    
T  39393379 ggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtacagtgg 39393478  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| | || |||||||||||| ||||||||| |||||||||||||||||| ||||    
T  39393479 catcaaaagtttaatccccatagtatcataaattcatcagattaacaagaatacacttcatct 39393541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 10922724 - 10922885
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| ||||||||| ||||||||||||       ||||||||||||| |||||||| |||| |||  ||||||| ||||||||||||||  | || |    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| ||  |||||||||||||| |||||| |||||||||| ||||||||||||    
T  10922824 atcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatct 10922885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 40884847 - 40884971
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    |||||||| ||||  |||||||||||||||| ||||||| |||||||||||||||   |||||||||||||||||||| | |||||||| ||||||||||    
T  40884847 ggtgaagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcagtccctatagtatcttcaattcatc 40884946  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||| | ||||||||||    
T  40884947 agattaacaagattgcacttaatct 40884971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 19899949 - 19899789
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||||||||||||| ||||||||||||| |||   |||||||||| ||||||||||  | |||    
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatgg 19899850  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||  |  |||||||||||||||||||||  ||||||||| ||||||||||    
T  19899849 catcaaaagttcaaccctcatagtatcatcaattcatcaggttaacaagactacacttaat 19899789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 28564921 - 28564799
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| ||||||||||||| |||  |||||||||||  |||||||||  | || ||||||||||||||||  |||||||||||||||||||||     
T  28564921 tgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcat 28564822  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||||| ||||||||||||    
T  28564821 attaacaagactacacttaatct 28564799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 15382929 - 15383091
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| || | |||||       |||||| |||||| ||||||||||||| |||  ||||||||| ||||| ||||||  | ||     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaatgt 15383028  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||||||| ||||||||||||    
T  15383029 catcaaaagttcagtcatcgtagtatcatcaattcatcagattaacaagactacacttaatct 15383091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 32267030 - 32267192
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| |||||||        |||||||||||| ||||||||||||| |||  ||||||||||||||||||||||  | ||     
T  32267030 ggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatga 32267129  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||| ||  |||| |||||||||  ||||| |||||||||| ||||||||||||    
T  32267130 catcaaaagttcactcctcatattatcatcaacccatcagattaacaagattacacttaatct 32267192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 15168085 - 15168254
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtc-----t 166  Q
    |||||||||||| ||||||| |||||||||        |||||||| |||| |||| |||||||||||| ||||||| |||||||||||||||      |    
T  15168085 ggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacgttgt 15168184  T
Q  167 a--gtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |  |||||||||||||||||||| |||||||||||||||||||||| |||||||||| | || |||||||    
T  15168185 acggtggcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactgcagttaatct 15168254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 21289661 - 21289816
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaa-------aagtgttgtgagtaacaccccactgtttgt 164  Q
    |||||| ||||| ||||||||||||||||||       ||||||||||||| |||| ||| ||       || ||| |||||||||||||||||||||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  165 ctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaag 220  Q
      ||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  21289761 acagtggcatcaaaagttcagtccctatagtatcatcaattcatcagattaacaag 21289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 27564046 - 27563923
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| |||||| | |||| | | ||||||||||| ||||||||||| ||||| |||||||||||||||  | ||| ||| ||||||||||||    
T  27564046 gtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgacatcaaaagttcagttccgataatattatcaattcatca 27563947  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||| ||||||||||||    
T  27563946 gattaacaagactacacttaatct 27563923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 32216089 - 32216212
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||  | |||| ||||||||||||||  | |||||||||||||||||     
T  32216089 ggtgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatcaattcatt 32216188  T
Q  210 aaattaacaagaatacacttaatc 233  Q
    | |||||||| | || ||||||||    
T  32216189 agattaacaaaactaaacttaatc 32216212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 33725778 - 33725618
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||| |||||| ||||||||        ||||||| |||  |||| ||||||||||||  |||||| || |||||| ||| | | ||||||    
T  33725778 aaaattctatggtaaagtcaagagaatgacttttctagtgaagtcaacgctatatcatcaaaagtgtattgagtagcagcccactatttctttggtggca 33725679  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||| | ||||||||||    
T  33725678 tcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactgcacttaatct 33725618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 30254420 - 30254581
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| || |||||||       | ||||||||||| ||||||||||||| |||  ||||||| || | |||||||||  | ||     
T  30254420 ggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaatacac-actgtttgtacaatga 30254518  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  || |||||||||||||||||| |||||||||| || |||||||||    
T  30254519 catcaaaagttcagtcctcaaagtatcatcaattcatcagattaacaagactagacttaatct 30254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 30327132 - 30326970
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||| |||||||||| | |||||        ||||| |||||| ||||||||||||| |||  ||||||| |||| || ||||||  | | |    
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaatag 30327033  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||| | ||||||||||||    
T  30327032 catcaaaagttcagtcatcatagtatcatcaattcatcagattaacaaaactacacttaatct 30326970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 51128894 - 51129015
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| |||||||| |||| |||  |||||||||| |||| ||||||  | || ||||||||||||||||   ||||||||||||||||||||    
T  51128894 gtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcatcaattcatca 51128993  T
Q  211 aattaacaagaatacacttaat 232  Q
     |||||||||| ||||||||||    
T  51128994 tattaacaagactacacttaat 51129015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 238654 - 238531
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| ||||  || |||| |||||||||||||| || |||||||||  | || |||||||||||||||| ||||||||||| ||||| |||    
T  238654 ggtgaagttaacactatagtattaaaaatgttgtgagtaacatcc-actgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattaatc 238556  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | | |||||||||||||||||||||    
T  238555 agactaacaagaatacacttaatct 238531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 4330323 - 4330439
Alignment:
Q  119 aacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaac 217  Q
    |||| |||| |||||||||||| |||||||||||||| | |||||||  ||||| |||||||||||||||  |||||||||||||||| |||| ||||||    
T  4330323 aacactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaagttcagtcatcatagtatcatcaatttatcagattaac 4330422  T
Q  218 aagaatacacttaatct 234  Q
    |||| | ||||||||||    
T  4330423 aagactgcacttaatct 4330439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 27227587 - 27227503
Alignment:
Q  150 caccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| ||||||||||  |||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  27227587 cacctcactgtttgtacagtggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatct 27227503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 47682673 - 47682515
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacac-cccactgtttgtctagtg 170  Q
    |||||||| |||||||||||||||||| |||       ||||||||||||| ||   ||| |||| ||||||||||||||| ||||||| ||||  ||||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacactag--cataaaaaatgttgtgagtaacactcccactgcttgtacagtg 47682576  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaa 231  Q
    | |||||||||||| ||  ||||||||||||||||||||| |||||||||| |||| ||||    
T  47682575 gtatcaaaagttcattcctcatagtatcatcaattcatcagattaacaagactacatttaa 47682515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 8222127 - 8222286
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| ||||||||||| | |||||        |||||||||||| ||||||||||||| |||  ||||||||||| ||| |||     | |||    
T  8222127 ggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgttac---aatgg 8222223  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||| ||||||||||||    
T  8222224 catcaaaagttcagttctcatagtatcatcaattcatcatattaacaagactacacttaatct 8222286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 28769688 - 28769810
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| ||| ||||||||| |||  |||||||||||| || ||||||  | |||||||||| |||| |||  |||||||||||||||||||||    
T  28769688 gtgaagttaacactatgacatcaaaaatgtaatgagtaacaccc-accgtttgtacaatggcatcaaaggttcggtcctcatagtatcatcaattcatca 28769786  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||| ||||||||||||    
T  28769787 tattaacaagactacacttaatct 28769810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 37619076 - 37618910
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaa--caccccactgtttgtctagt 169  Q
    |||||||||||||||||||| || |||||||       ||||||||||||| ||||||||||||| | |  |||||||  |||||||||||||||  | |    
T  37619076 ggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaaat 37618977  T
Q  170 ggcatcaaaagttcagtctccatagtat--catcaattcatcaaattaacaagaatacacttaatct 234  Q
    | |||||||||||||||   ||||||||  ||||||||||||| |||||||| | ||||||||||||    
T  37618976 gacatcaaaagttcagttctcatagtatatcatcaattcatcagattaacaatactacacttaatct 37618910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 46931446 - 46931567
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| ||||||||||||| |||  ||||||| ||||||||||||||  |  |||||||||| ||||| |  |||| ||||||||||||||||    
T  46931446 gtgaagttaacactataacatcaaaaatgtaatgagtaataccccactgtttgtagaacggcatcaaaaattcagccctcataatatcatcaattcatca 46931545  T
Q  211 aattaacaagaatacacttaat 232  Q
      ||||||||| ||||||||||    
T  46931546 ggttaacaagactacacttaat 46931567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 23999343 - 23999503
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| |||||||       ||||||||||||| || ||||| |||| | |   ||||||||||||||| |||||  | ||     
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatga 23999442  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| |  |||||||| ||||||||||||  ||||||||| ||||||||||    
T  23999443 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaat 23999503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 37451324 - 37451443
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaat 213  Q
    ||||||||| ||||||||||||| |||  | |||||||||| || ||||||  | || ||||||||||||||||  | |||||||||||||| |||| ||    
T  37451324 aagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagttcagtcctc-tagtatcatcaatttatcatat 37451422  T
Q  214 taacaagaatacacttaatct 234  Q
    |||||||| ||||||||||||    
T  37451423 taacaagactacacttaatct 37451443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 27763451 - 27763329
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||||| ||||||||||||| |||  |||||||||||| |  ||||||  | || |||||||||| ||| |  |||||||||||||||| ||||    
T  27763451 gtgaagttaacactataacatcaaaaatgtaatgagtaacaccc-atagtttgtagaatgacatcaaaagtccagccctcatagtatcatcaatttatca 27763353  T
Q  211 aattaacaagaatacacttaatct 234  Q
      ||||||||| ||||||||||||    
T  27763352 ggttaacaagactacacttaatct 27763329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 25160725 - 25160790
Alignment:
Q  169 tggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||  ||||||||||||||||||| | ||||| |||| ||||||||||||    
T  25160725 tggcatcaaaagttcagtcctcatagtatcatcaattcattagattaataagactacacttaatct 25160790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 22170807 - 22170869
Alignment:
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||| |||| |||||||||||||| | ||||| || | ||||||||||||    
T  22170807 catcaaaagttcagtctacataatatcatcaattcattagattaataacactacacttaatct 22170869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 27227657 - 27227627
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  27227657 ggaaaattctatggtgaagtcatgagaatga 27227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 43579242 - 43579272
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  43579242 ggaaaattctatggtgaagtcatgagaatga 43579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 11466815 - 11466977
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||| |||||||||       | ||||||||| | |||||||||  ||||||||||||||||||||||||||||||  |||||    
T  11466815 ggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtgg 11466914  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  11466915 catcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatct 11466977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 35844317 - 35844479
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       ||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||||  ||||     
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagtga 35844416  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  35844417 catcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatct 35844479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 22450959 - 22451121
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       |||||||| |||| |||| |||||||||||| ||||||| |||| |||||||||| | ||||    
T  22450959 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggtgg 22451058  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  22451059 catcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatct 22451121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 44186686 - 44186524
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| |||||||  ||||||||       ||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |  ||||     
T  44186686 ggaaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtga 44186587  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  44186586 catcaaaagttcagtccccatagtatcatcaattcatcaaattaacaaaaatacacttaatct 44186524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 4015451 - 4015603
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       | ||||||||||| |||| |||||||||||||||||||||||||| |||||||||  ||||     
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtga 4015550  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaata 224  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  4015551 catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagaata 4015603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 37203058 - 37203220
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       | ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||  |||||    
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtgg 37203157  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||| | |||||||||| ||||||||||||    
T  37203158 catcaaaagttcagtcctcatagtatcatcaattcataagattaacaagactacacttaatct 37203220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 52041108 - 52040945
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccac-tgtttgtctagtg 170  Q
    ||||||||||  |||||||||||||||||||       ||||||||||| | ||||||||||||||||| ||||||||| |||||  ||||||| |||||    
T  52041108 ggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagtg 52041009  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  52041008 gcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagattacacttaatct 52040945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 21193597 - 21193759
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||| |||||||||||||||       ||||||||||||| | |   |||||||||||||||||||||||||||||||||||  ||||     
T  21193597 ggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagtga 21193696  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||||    
T  21193697 catcaaaagttcagtccccatggtatcattaattcatcagattaacaagaatacatttaatct 21193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 7327668 - 7327507
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaa-cattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||||||||||| ||||||||||        |||||||||| || ||||||||||||||||||||||||||||| ||| | |||||  ||||    
T  7327668 ggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagtg 7327569  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
     |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  7327568 acatcaaaagttcagtccccatagtatcatcaattcatcggattaacaagaatacacttaat 7327507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 29099356 - 29099506
Alignment:
Q  82 atggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagt 181  Q
    ||||||||||||| |||||||       ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||  |||| |||| |||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagt 29099455  T
Q  182 tcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  29099456 tcagtccccttagtatcatcaattcatcatattaacaagaatacacttaat 29099506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 2007964 - 2008086
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||| |||||||||||||||     
T  2007964 tgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcaatccccatagcatcatcaattcatcag 2008063  T
Q  212 attaacaagaatacacttaatct 234  Q
    ||||||||||||| |||||||||    
T  2008064 attaacaagaatatacttaatct 2008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 45174494 - 45174656
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtg--agtaacaccccactgtttgtctagt 169  Q
    |||||||| |||||||||||  ||||||| |       ||||||||||||| |||||||||||||||||||||  ||||||||  ||||||||||  |||    
T  45174494 ggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacagt 45174593  T
Q  170 ggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
     ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  45174594 agcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacatttaat 45174656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 26941445 - 26941283
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||| ||||| ||||||| | |  |||||||||||||||||||||| || ||     
T  26941445 ggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatga 26941346  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||| ||||||| ||||||||| |||||||||| ||||||||||||    
T  26941345 catcaaaagttcagtcctcatggtatcattaattcatcagattaacaagactacacttaatct 26941283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 37157699 - 37157860
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| ||||        | ||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||  |||||    
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtt-gtacagtgg 37157797  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||||||||||||| || | |||||||||| ||||||||||||    
T  37157798 catcaaaagttcagtcatcatagtatcatcaatttataagattaacaagactacacttaatct 37157860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 51213166 - 51213006
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| | |||||| |||| |||  |||| |||||||||||||||||  | |||    
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatgg 51213067  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||| ||||  |||||||||||||| |||||| |||||||||| ||||||||||    
T  51213066 catcaaaagttgagtcctcatagtatcatcaactcatcagattaacaagactacacttaat 51213006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 40935995 - 40936142
Alignment:
Q  85 gtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttca 184  Q
    ||||||||||||||||||       ||||||||||||| |||| |||||||||||||| |||||||||| || ||||| |  |||| |||||||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttca 40936094  T
Q  185 gtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||  |||||||||||| |||||||| |||||||||||||||||||||    
T  40936095 gtcctcatagtatcatctattcatcagattaacaagaatacacttaat 40936142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 46297945 - 46297786
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||||||| |||||       ||||||||||||| ||||||||||||| | | ||||||||||| |||||||||||  | ||||     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatc 233  Q
    |||||||||||||| || ||||||||||||||||| | |||||||| | |||||||||||    
T  46297845 tcaaaagttcagtccccgtagtatcatcaattcattagattaacaaaactacacttaatc 46297786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 48354932 - 48355090
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| ||||| || |||| |||  |||||||||||||| |||||||  | |||    
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaatgg 48355031  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacactta 230  Q
    |||||||||||||||   |||||||||||||| |||||| |||||||||| ||||||||    
T  48355032 catcaaaagttcagttctcatagtatcatcaactcatcagattaacaagactacactta 48355090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 11357535 - 11357387
Alignment:
Q  87 gaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtctagtggcatcaaaagttcag 185  Q
    ||||||||||||||||       ||||||||||||| |||| |||||||||| | |||||||||||||| |||||||||  ||| |||||||||||||||    
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  186 tctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||  ||||||||||||||||||||| |||||||||| |||| |||||||    
T  11357435 tcatcatagtatcatcaattcatcagattaacaagactacatttaatct 11357387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 40552444 - 40552284
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||||||||||       || |||||||||| ||||||||||||| |||  |||||||||| |||| ||||||  | ||     
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatga 40552345  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||||||||  |||| |||||||||||||||| |||||||| | ||||||||||    
T  40552344 catcaaaagttcagtcctcataatatcatcaattcatcagattaacaacactacacttaat 40552284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 3655387 - 3655225
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||| | |||||       | | ||||||||| |||||||| |||| |||  ||||||||||||||| ||||||  | ||     
T  3655387 ggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 3655288  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  3655287 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatct 3655225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 20373481 - 20373319
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||| |||||||||| |||||||       ||||||||||| | ||||||||||||| |||   |||||||||||||||||||||  | ||     
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatga 20373382  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||| ||||||||||||    
T  20373381 catcaaaagttcagttctcatggtatcatcaattcatcaaattaacaagactacacttaatct 20373319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 34132926 - 34133086
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||  |||||||| || |||||       |||||| |||||| ||||  ||||||| |||||||||||||||||||||||||||  | ||     
T  34132926 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 34133025  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||||| ||||| |||||||||||||||| | ||| |||||||||||||||    
T  34133026 catcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaat 34133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 47481513 - 47481673
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||||||||||||||  ||||||       ||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||  | ||     
T  47481513 ggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatga 47481612  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    ||||||||||| || |  |||||||||||||||||||||  ||||||||| ||||||||||    
T  47481613 catcaaaagtttagccctcatagtatcatcaattcatcatgttaacaagactacacttaat 47481673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 27480564 - 27480402
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| |||||||||||||||||       ||| |||| |||| ||||||||||||||| |  |||||| || || | |||||||   |||     
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggtga 27480465  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  27480464 catcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatct 27480402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 39282644 - 39282805
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| |||||       | | || |||||| ||||||||||||| ||| |||||||| |||||||||||| |  |||||    
T  39282644 ggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaataccccactgtttatacagtgg 39282742  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||   |||| ||||||| |||||||| |||||||||| ||||||||||||    
T  39282743 catcaaaagttcagttctcatattatcatccattcatcagattaacaagactacacttaatct 39282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 42506214 - 42506098
Alignment:
Q  118 taacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaac 217  Q
    ||||| ||||||||||||| |||  ||||||| ||||||||||||||  | || ||||||||||||||||  ||||||||||||||||||||| ||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaac 42506115  T
Q  218 aagaatacacttaatct 234  Q
    |||| ||||||||||||    
T  42506114 aagactacacttaatct 42506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 43348319 - 43348410
Alignment:
Q  142 gtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||    
T  43348319 gtgagcaacaccccactgtttgtttagtggcatcaaaagttcagtct-tttagtatcatcaattcatcagattaacaagaatacacttaatct 43348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 44891535 - 44891650
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||         ||||||||||||| ||||  |||||||||||||||| |||    
T  44891535 ggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgt---------ggcatcaaaagtttagtccacatagtatcatcaattaatc 44891625  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||||||||||||||||    
T  44891626 agattaacaagaatacacttaatct 44891650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 32373466 - 32373623
Alignment:
Q  75 aaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcat 174  Q
    |||||||||| |||||||||||||||||         | ||||||||| |||| |||||||||||||||||||||| ||  |||||||||  ||||||||    
T  32373466 aaattctatgatgaagtcatgagaatgacttttccaataaagttaacactatagcatcaaaagtgttgtgagtaactcc--actgtttgtacagtggcat 32373563  T
Q  175 caaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||   | | || ||||||||||||||||| |||||||||||||||||||||||    
T  32373564 caaaagttccaccccaatggtatcatcaattcatcatattaacaagaatacacttaatct 32373623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 22446211 - 22446087
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctc-catagtatcatcaattcat 208  Q
    |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||  ||||||||||||||||||  | | |||||||||||||||||||    
T  22446211 ggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggcatcaaaagttcaaaccctcatagtatcatcaattcat 22446113  T
Q  209 caaattaacaagaatacacttaatct 234  Q
    || || || |||| ||||||||||||    
T  22446112 catataaataagactacacttaatct 22446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 53229300 - 53229175
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccc-cactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcat 208  Q
    |||||| |||||| |||| |||||||||||| ||||| ||||||| || |||||||  ||| |||||||||||||||||  |||| ||||||||||||||    
T  53229300 ggtgaaattaacactatagcatcaaaagtgtagtgagcaacaccctcaatgtttgtacagttgcatcaaaagttcagtcatcataatatcatcaattcat 53229201  T
Q  209 caaattaacaagaatacacttaatct 234  Q
    || |||||||||| |||| |||||||    
T  53229200 cagattaacaagactacagttaatct 53229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 14586796 - 14586693
Alignment:
Q  131 tcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacactta 230  Q
    ||||||||||||||||||||||| |||| ||| |  ||||  ||||||||||  ||| || ||||||||||||||||||| |||||||||||||||||||    
T  14586796 tcaaaagtgttgtgagtaacacctcactatttatacagtgatatcaaaagttttgtccccttagtatcatcaattcatcagattaacaagaatacactta 14586697  T
Q  231 atct 234  Q
    ||||    
T  14586696 atct 14586693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 24489108 - 24488985
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    |||||||||| | ||||  || |||| ||||||||||||||  ||||||||||   | || |||||||||||||||| ||||| ||||||||||||||||    
T  24489108 gtgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagtccccatattatcatcaattcatca 24489009  T
Q  211 aattaacaagaatacacttaatct 234  Q
     | |||||||||||||||||||||    
T  24489008 gactaacaagaatacacttaatct 24488985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 53176086 - 53176207
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    |||||||||||| |||||||||||| |||||| |||||   || |||||||||  | |  ||||||||||||||||  |||||||||||||||||||||     
T  53176086 tgaagttaacatcataacatcaaaaatgttgtaagtaatgtcc-actgtttgtacaataacatcaaaagttcagtcctcatagtatcatcaattcatcag 53176184  T
Q  212 attaacaagaatacacttaatct 234  Q
    |||||||||| ||||||||||||    
T  53176185 attaacaagattacacttaatct 53176207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 4761796 - 4761672
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||| | ||||| ||||||| |||  ||||||||||  ||||||||||  | || ||||||||||||||||  |||||||||||||| |||||    
T  4761796 ggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaactcatc 4761697  T
Q  210 aaattaacaagaatacacttaatct 234  Q
      |||||||||| ||||||||||||    
T  4761696 tgattaacaagactacacttaatct 4761672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 24708246 - 24708145
Alignment:
Q  126 taacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatac 225  Q
    ||||||||||| ||  |||||||||||| ||||||  ||  |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||    
T  24708246 taacatcaaaactgcagtgagtaacacctcactgt--gtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactac 24708149  T
Q  226 actt 229  Q
    ||||    
T  24708148 actt 24708145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 25579731 - 25579892
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||| |||||| |||| ||||||||||       ||||||||||| | |||| ||||||||||||||||| |||||  | ||| ||| |  |||| |    
T  25579731 gaaaattttatggttaagttatgagaatgatttttctggtgaagttaatactatagcatcaaaagtgttgtgaataacattctactatttatacagtgac 25579830  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||| ||||| |||||||| || || | |||||||| ||||||||||||||    
T  25579831 atcaaaagttcagtccccatattatcatcagtttattagattaacaaaaatacacttaatct 25579892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 33378931 - 33378808
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    ||||||| |||| ||||  ||||||||||| |||||||  |||||| | |||||   ||| |||||||||||||||| ||||||||| ||||||||||||    
T  33378931 gtgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacggtgacatcaaaagttcagtccccatagtattatcaattcatca 33378832  T
Q  211 aattaacaagaatacacttaatct 234  Q
     |||||||||| | ||||||||||    
T  33378831 gattaacaagactgcacttaatct 33378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 3362282 - 3362400
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||| ||||| || | | |||||||||| |||||| |||||  |||||||||||||||||| ||  ||| ||||||||||||||||    
T  3362282 ggtgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagttcactcctcatggtatcatcaattcatc 3362381  T
Q  210 aaattaacaagaatacact 228  Q
    |  ||||||||| ||||||    
T  3362382 atgttaacaagactacact 3362400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 21009948 - 21009827
Alignment:
Q  111 gtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatca 210  Q
    ||||| || ||| ||||||||||||| |||  |||||||||||||||| |||||  | || |||||||||||||| |  |||| ||||||||||||||||    
T  21009948 gtgaatttgacactataacatcaaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagttcagccctcatattatcatcaattcatca 21009849  T
Q  211 aattaacaagaatacacttaat 232  Q
      ||||||||| ||||||||||    
T  21009848 ggttaacaagactacacttaat 21009827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 33698183 - 33698263
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacacccca 156  Q
    |||||||||||||||||||||||||||||          |||||||||||| ||||||||||||| |||||||||||||||||||    
T  33698183 ggaaaattctatggtgaagtcatgagaat----tctctagtgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 43976068 - 43975911
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| ||||||||||||||||||||||         |||||| |||| |||| |||||||||||| ||||||| ||| ||||| |||||    || ||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttt---tgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgaca 43975972  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||| | ||  |||| |||||||||||||||| |||||||| | | ||||||||||    
T  43975971 tcaaaagtttaatcctcataatatcatcaattcatcagattaacaaaattgcacttaatct 43975911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 29163912 - 29163971
Alignment:
Q  175 caaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||  | ||||||||||||||||||| ||||| |||||||||||||||||    
T  29163912 caaaagttcagtcctcttagtatcatcaattcatcagattaataagaatacacttaatct 29163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 33698265 - 33698306
Alignment:
Q  193 agtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  33698265 agtatcatcaattcatcagattaacaagaatacacttaatct 33698306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 11835790 - 11835651
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    ||||||||||||||||||||||||||||||       ||||||||||||| |||     |||||||||||||||||||||| ||||||||||            
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactat-----caaaagtgttgtgagtaacacctcactgtttgta------- 11835703  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
              ||||| ||||||||||||||||| |||| |||||||| ||||||||||||||    
T  11835702 ----------cagtccccatagtatcatcaatttatcatattaacaaaaatacacttaatct 11835651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 54505839 - 54505958
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| ||||||||||||| |||  |||||||||||||| | ||| |  | || |||||||| ||||| || ||||||||||| ||| ||||      
T  54505839 tgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatgacatcaaaaattcagcct-catagtatcataaatacatcgg 54505937  T
Q  212 attaacaagaatacacttaat 232  Q
     ||||||||| ||||||||||    
T  54505938 gttaacaagactacacttaat 54505958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 234
Target Start/End: Complemental strand, 54828843 - 54828724
Alignment:
Q  114 aagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaat 213  Q
    ||||||||| |||||||| |||| |||  ||||||||||||||| ||||    |  | |||||||| |||| ||| ||||| ||||||||||||||| ||    
T  54828843 aagttaacactataacataaaaa-tgtaatgagtaacaccccaccgtttaaacaacgacatcaaaaattcattcttcatagcatcatcaattcatcatat 54828745  T
Q  214 taacaagaatacacttaatct 234  Q
     ||||||| ||||||||||||    
T  54828744 gaacaagactacacttaatct 54828724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 2613921 - 2613967
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccact 158  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  2613921 tgaagttaacactataacaccaaaagtgttgtgagtaacaccacact 2613967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 46994746 - 46994684
Alignment:
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  |||||||||||||| ||||   |||||||||| ||||||||||||    
T  46994746 catcaaaagttcagtcctcatagtatcatcaactcatatgattaacaagactacacttaatct 46994684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 38591786 - 38591851
Alignment:
Q  169 tggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||| ||||  |||| ||| ||||| |||||| |||||||||| ||||||||||||    
T  38591786 tggcatcaaaagttaagtccacatattattatcaactcatcagattaacaagactacacttaatct 38591851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 40640682 - 40640652
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  40640682 ggaaaattctatggtgaagtcatgagaatga 40640652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 53811767 - 53811698
Alignment:
Q  158 tgtttgtctagtggcatcaaaagttcagtct------ccatagtatcatcaattcatcaaattaacaaga 221  Q
    |||||||  |||||||||||||||||||| |      |||||||||||||||||||||| ||||||||||    
T  53811767 tgtttgtacagtggcatcaaaagttcagtatataaccccatagtatcatcaattcatcagattaacaaga 53811698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 102
Target Start/End: Original strand, 43348281 - 43348310
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatga 102  Q
    ||||||||||||||||||||||||||||||    
T  43348281 gaaaattctatggtgaagtcatgagaatga 43348310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 36012246 - 36012290
Alignment:
Q  190 catagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||| |||||||||||||||| || ||||||||||||| ||||||    
T  36012246 cataatatcatcaattcatcagatgaacaagaatacacctaatct 36012290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 19424831 - 19424669
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  19424831 ggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtgg 19424732  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||| ||||  ||||||||||||||||||||| |||||||||||||| ||||||||    
T  19424731 catcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacgcttaatct 19424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 36641988 - 36642148
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||||||||||||||       |||||| |||| | |||| |||||||||||||| |||||||||| ||||||||||  |||| ||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagaatacacttaatct 36642148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 4264280 - 4264118
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| | |||||       ||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||  ||||     
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtga 4264181  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  4264180 catcaaaagttcagtctccatagtattatcaattcatcatattaagaagaatacacttaatct 4264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 13711465 - 13711626
Alignment:
Q  73 gaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggc 172  Q
    |||||||||||||||||||||| |||||||       |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||| |    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| ||||  ||| ||||||||||||||||| ||||||||||||||| |||||||    
T  13711565 atcaaaagtttagtccacatggtatcatcaattcatcagattaacaagaatacatttaatct 13711626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 43771039 - 43770882
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||||| |||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |  |||||||    
T  43771039 aaaattctatggtgaagtcattagaatgatttttt-ggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| || || |||||||||||||||| ||||||||||||| |||||||    
T  43770940 tcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatatacttaat 43770882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 4478368 - 4478531
Alignment:
Q  72 ggaaaattctatggtgaagtcat-gagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtg 170  Q
    |||||||||||| |||||||||| || |||||       ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||  ||||    
T  4478368 ggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtg 4478467  T
Q  171 gcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  4478468 gcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatct 4478531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 33551189 - 33551027
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||| |||||||||||||||||||        |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||  | ||     
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatga 33551090  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  33551089 catcaaaagttcggtcttcatagtatcatcaattcatcagattaacaagactacacttaatct 33551027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 19313852 - 19314012
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||| |||||||       |||||||||||||||||| |||||||||||||||||||||||||  ||| ||| |  ||||     
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtga 19313951  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatc 233  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  19313952 catcaaaagttcagtc-ctatagtatcatcaattcatcagattaacaagaatacacttaatc 19314012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 225
Target Start/End: Complemental strand, 41464051 - 41463900
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||| |||||||||       ||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||  |||||||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatac 225  Q
    ||||||||||| ||  ||||||||||||||||||||| ||||||||||||||    
T  41463951 tcaaaagttcaatcctcatagtatcatcaattcatcatattaacaagaatac 41463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 4166922 - 4167084
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||||||||  ||||||| | |||||||||||||||||||||||||  | |||    
T  4166922 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 4167021  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||| |||||||    
T  4167022 catcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatct 4167084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 31570937 - 31570775
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| |||||||| |       |||||| |||||| |||||||| ||||||||||| |||||||||||||| ||| | |||||     
T  31570937 ggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagtga 31570838  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||||||    
T  31570837 catcaaaagttcagtccacatagtatcatgaattcatcagattaacaagaatacacttaatct 31570775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 33660569 - 33660409
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||||| | |||||        || ||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  | ||||||||||||||||| | ||||||| |||||||||||||||    
T  33660469 tcaaaagttcagtcctcttagtatcatcaattcattagattaacaggaatacacttaatct 33660409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 27350103 - 27349980
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||  |||| |||||||||||||||| || ||||||||||||||||||    
T  27350103 ggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaaagttcagtc-ccttagtatcatcaattcatc 27350005  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||||||||||||||||    
T  27350004 agattaacaagaatacacttaatct 27349980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 29242341 - 29242179
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||||||||||||||| ||||        ||||||||||| | |||||||| |||| | | ||| |||||||||||||||||||  |||||    
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagtgg 29242242  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     |||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||    
T  29242241 tatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaaaactacacttaatct 29242179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 33709397 - 33709273
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||||||| ||  |||| |||||||||||||||| ||||||||||||||| |  ||    
T  33709397 ggtgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtatcatcaaatattc 33709298  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||||||| ||||||||    
T  33709297 agattaacaagaatacgcttaatct 33709273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 43648410 - 43648286
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| ||||||||||||| |||  ||||||||||| |||||||||| || || ||||||||||||||||  |||||||||||||| |||||    
T  43648410 ggtgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtatcatcaactcatc 43648311  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||| ||||||||||||    
T  43648310 agattaacaagactacacttaatct 43648286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 5881599 - 5881701
Alignment:
Q  132 caaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaa 231  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||| |||| || ||||||||||||||||||| ||||||||||||||| ||||    
T  5881599 caaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttgagtccccttagtatcatcaattcatcatattaacaagaatacatttaa 5881698  T
Q  232 tct 234  Q
    |||    
T  5881699 tct 5881701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 37905746 - 37905870
Alignment:
Q  110 ggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatc 209  Q
    ||||||||||||| |||||||| |||| |||   |||||||||||||| ||||||  | || ||||||||||||||||  ||||||||||||||||||||    
T  37905746 ggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatc 37905845  T
Q  210 aaattaacaagaatacacttaatct 234  Q
    | |||||||||||||||||||||||    
T  37905846 agattaacaagaatacacttaatct 37905870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 44285951 - 44286111
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||| || |||||||||||| ||||||       | ||||||||||| |||| |||||||||||||| ||| || | | |||||||||| ||||||||    
T  44285951 aaaattatacggtgaagtcatgcgaatgatttttctgatgaagttaacactatagcatcaaaagtgttgcgagcaatatctcactgtttgtatagtggca 44286050  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||| ||||  ||||||||||| ||||||||| |||||||| ||||||||||||||    
T  44286051 tcaaaagtttagtccacatagtatcataaattcatcagattaacaataatacacttaatct 44286111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 17071940 - 17071778
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||| ||||||       ||||||||||||| ||||||| ||||| ||| || ||||||| | || | |||||  | ||     
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatga 17071841  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||| || | ||||||||||||||||||||| |||||||||| ||||||||||||    
T  17071840 catcaaaagttcggtattcatagtatcatcaattcatcagattaacaagactacacttaatct 17071778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 39167566 - 39167408
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| ||||||||||||| ||||||||       | |||||||||||  |||  ||||||||| |||||||||||||| ||||||||||  | ||     
T  39167566 ggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaatga 39167467  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacactta 230  Q
    ||||||||||||||||  ||||||||||||||||||| | | |||||||||||||||||    
T  39167466 catcaaaagttcagtcctcatagtatcatcaattcattagagtaacaagaatacactta 39167408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 4763628 - 4763793
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacat---tataacatcaaaagtgttgtgagtaacaccccactgtttgtctag 168  Q
    ||||||||||||| ||||||||||| |||||       | |||||||||||    |||| || ||||| ||| |||||||||||||||||||||||  ||    
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacag 4763727  T
Q  169 tggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    || |||||||||||||||  ||||||||| |||||||||||| |||||||| | ||||||||||||    
T  4763728 tgacatcaaaagttcagttcccatagtataatcaattcatcagattaacaaaactacacttaatct 4763793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 26357577 - 26357739
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||| |||||||||||||||| |||||       | ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||  ||||     
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtga 26357676  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||||||||    ||||  | |||||||||||| ||||||||||  |||||||||||    
T  26357677 catcaaaagttcagttcttatagagttatcaattcatcatattaacaagatcacacttaatct 26357739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 3176941 - 3177101
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||| | || |||||       | ||||||||| | ||||| ||||||| |||| |||||||||| | |||||||||  | || ||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  ||||||||||||||||||||| | ||| |||||||||||||||||    
T  3177041 tcaaaagttcagtcctcatagtatcatcaattcatcagactaagaagaatacacttaatct 3177101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 11366584 - 11366424
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||| |||| |||||||       |||||| |||||| ||||||||||||| |||  ||||||||| | |||| ||||| || ||     
T  11366584 ggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatga 11366485  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||||| |  |||||||||||||||||||||  ||||||||| |||| |||||    
T  11366484 catcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacatttaat 11366424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 17054299 - 17054137
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||||| ||||||       ||||||||||| | ||||||||||||| ||| || ||||||| | || |||||||  | ||     
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatga 17054200  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| | || | |||| |||||||||||||||| ||||||||||  |||||||||||    
T  17054199 catcaaaagtncggtattcataatatcatcaattcatcagattaacaagaccacacttaatct 17054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 18494471 - 18494321
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||| |||||||||||||| |||||       ||||||||||||| |||| |||||||||||||||||||||||||||||            |     
T  18494471 ggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac------------ga 18494384  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| ||| || ||||||||||| ||||    
T  18494383 catcaaaagttcagtcctcatagtatcatcaattcatcagattcactagaatacacttgatct 18494321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 2325573 - 2325442
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||| ||| ||||||        |||||||||||| |||||||||| || |||  |||||||||||||| |||||||  | |||    
T  2325573 ggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacactgg 2325474  T
Q  172 catcaaaagttcagtctccatagtatcatcaa 203  Q
    ||||||||||||||||  ||||||||||||||    
T  2325473 catcaaaagttcagtcctcatagtatcatcaa 2325442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 7007054 - 7006962
Alignment:
Q  142 gtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    |||||||||| ||||||||||||  ||| |||||||||||| |||  ||||||||||||||||| || | |||||||||||||||||||||||    
T  7007054 gtgagtaacatcccactgtttgtacagtagcatcaaaagtttagttcccatagtatcatcaatttataagattaacaagaatacacttaatct 7006962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 33902061 - 33902215
Alignment:
Q  65 aaagaagggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgt 164  Q
    |||||| ||||||||||||| ||||||| | |||||||       ||||||||||||| ||  |||| |||| ||| |||||||| ||||||||||||||    
T  33902061 aaagaatggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacacta--acataaaaaatgtagtgagtaataccccactgtttgt 33902158  T
Q  165 ctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaaga 221  Q
      | || ||||||||||||||||  || |||||||||| ||||||| ||||||||||    
T  33902159 aaaatgacatcaaaagttcagtcctcaaagtatcatcagttcatcagattaacaaga 33902215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 44913662 - 44913825
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccact-gtttgtctagtg 170  Q
    |||||||||||||||||||||| || |||||       | ||||||||||| | ||  ||||||| |||||||||||||||| |||| ||||||  | ||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttatg-tgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  171 gcatcaaaagttcagtctcc-atagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     ||| ||||||||| || || |||||||||||||||||||| | |||||||||||||||||||||    
T  44913761 acataaaaagttcaatcccccatagtatcatcaattcatcagactaacaagaatacacttaatct 44913825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 19289486 - 19289364
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||| ||||||||||||| | |  |||||||||||||| |||||||  | || ||||||||||| |||   || ||||||||||| ||||||     
T  19289486 tgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaatgacatcaaaagttaagttctcacagtatcatcaactcatcag 19289387  T
Q  212 attaacaagaatacacttaatct 234  Q
    ||||| |||| ||||||||||||    
T  19289386 attaataagactacacttaatct 19289364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 41051357 - 41051263
Alignment:
Q  124 tataacatcaaaagtgttgtgagtaacaccccactgtttgt-ctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaac 217  Q
    |||| ||||||||||||||||  ||||||  |||| ||||| | |||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  41051357 tatagcatcaaaagtgttgtgtataacacttcactatttgtaccagtggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaac 41051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 41960940 - 41961002
Alignment:
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  41960940 catcaaaagttcagtccacatagtatcatcaattcatcagattaacaagactacacttaatct 41961002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 45327820 - 45327882
Alignment:
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| | ||||||||||    
T  45327820 catcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactgcacttaatct 45327882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 41465509 - 41465591
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccc 154  Q
    |||||||||||||||||||||||||||||||       ||||||||||||| |||| ||||||| |||| ||||||| |||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgagtagcaccc 41465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 31861953 - 31862014
Alignment:
Q  173 atcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||| |||||||   |||||||||||||||||||| |||||||||| ||||||||||||    
T  31861953 atcaaaatttcagtcattatagtatcatcaattcatcagattaacaagactacacttaatct 31862014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 19501839 - 19501795
Alignment:
Q  175 caaaagttcagtctccatagtatcatcaattcatcaaattaacaa 219  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  19501839 caaaagttcagtctctatagtatcatcaattcatcagattaacaa 19501795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 7007093 - 7007063
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  7007093 ggaaaattctatggtgaagtcatgagaatga 7007063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Complemental strand, 43446510 - 43446480
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatga 102  Q
    |||||||||||||||||||||||||||||||    
T  43446510 ggaaaattctatggtgaagtcatgagaatga 43446480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 185
Target Start/End: Original strand, 35958909 - 35959022
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    ||||||||||||| ||||||||| | |||||       |||||||||  || |||||||| |||| |||  |||| |||||||||||||||||  | ||     
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatga 35959008  T
Q  172 catcaaaagttcag 185  Q
    ||| ||||||||||    
T  35959009 cattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 7889 - 8049
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    |||||||||||||||||| || |||||||       | ||||||||||| ||||||||||||| |||  ||||||||||||||||||||||  | || ||    
T  7889 aaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgaca 7988  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  7989 tcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatct 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 94528 - 94408
Alignment:
Q  112 tgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaa 211  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||  ||| ||||| |||||||||||||| |     
T  94528 tgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtttggtccccatactatcatcaattcatgag 94429  T
Q  212 attaacaagaatacacttaat 232  Q
    |||||||||| ||||||||||    
T  94428 attaacaagactacacttaat 94408  T

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Target: scaffold0002; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 134 - 296
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 171  Q
    |||||||||||||||||||||| || |||||       ||||||||||||| | ||  || |||| ||||||||||||||| |||||||||||  | |||    
T  134 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatgg 233  T
Q  172 catcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
    ||||||||||||||||  ||||||||||||||||||||| | ||||||||||||| |||||||    
T  234 catcaaaagttcagtcctcatagtatcatcaattcatcagactaacaagaatacatttaatct 296  T

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Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 408559 - 408452
Alignment:
Q  126 taacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatac 225  Q
    ||||||||||| |||  |||||||||||  || ||||||  | ||  |||||||||||||||  | ||||||||||||||||||| |||||||||| |||    
T  408559 taacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactac 408461  T
Q  226 acttaatct 234  Q
    |||||||||    
T  408460 acttaatct 408452  T

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Target: scaffold0318 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 11903 - 12071
Alignment:
Q  69 aagggaaaattctatggtgaagtcatgagaa-tgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacacccc-actgtttgtct 166  Q
    |||| |||||||||||||||||||||||||| |||       |||||| ||||||  ||||||| ||||||||||||||||||||||| | ||||||| |    
T  11903 aaggaaaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccccattgtttgtat 12002  T
Q  167 -agtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaatct 234  Q
     ||||| |||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||    
T  12003 cagtggtatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagaatacacttaatct 12071  T

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Target: scaffold0022 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 146199 - 146041
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||| ||||||||||| |||||||       ||| |||||||||||||||||| |||| |||  |||||||||||||| | |||||  | || ||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    |||||||||||| || |||||||||||||||||||||  ||||||||| ||||||||||    
T  146099 tcaaaagttcagccttcatagtatcatcaattcatcaggttaacaagactacacttaat 146041  T

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Target: scaffold0009 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 42348 - 42439
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttg 163  Q
    |||||||| |||||||||||||||||||| |       ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  42348 ggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttg 42439  T

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Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 100821 - 100885
Alignment:
Q  72 ggaaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaa 136  Q
    |||||||||||||||||||||||||||||||       ||||||||||||  |||||||||||||    
T  100821 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaa 100885  T

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Target: scaffold0061 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 43959 - 44117
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||| | |||| ||       ||||||||||||  ||||| ||||||| |||  |||||||||||||  |||||||  | |||||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    | ||||||||||||  ||||||||||||||||||||| ||||| |||| |||| |||||    
T  44059 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaat 44117  T

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Target: scaffold0017 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 154828 - 154670
Alignment:
Q  74 aaaattctatggtgaagtcatgagaatgannnnnnnggtgaagttaacattataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtggca 173  Q
    ||||||||||||||||||| | |||| ||       ||||||||||||  ||||| ||||||| |||  |||||||||||||  |||||||  | |||||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  174 tcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacacttaat 232  Q
    | ||||||||||||  ||||||||||||||||||||| ||||| |||| |||| |||||    
T  154728 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaat 154670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 267335 - 267446
Alignment:
Q  124 tataacatcaaaagtgttgtgagtaacaccccactgttt-gtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaa 222  Q
    |||| |||||||| | | |||||||||| || ||||||| ||  |||| |||||||||||||||||| ||| |||||||||||||| | |||| |||||     
T  267335 tatagcatcaaaaatatagtgagtaacatccaactgttttgtacagtgtcatcaaaagttcagtctctataatatcatcaattcattagattagcaagac 267434  T
Q  223 tacacttaatct 234  Q
    ||||||||||||    
T  267435 tacacttaatct 267446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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